Pathogenicity Island: Hrp PAI


• General information

Name : Hrp PAI
Host strain : Xanthomonas oryzae MAFF 311018
Function : Type III secretion system (hrp,hrc), hpa (hrp-associated)
Insertion site : Not published


• GenBank accessions: 2 records

1) AB045311 (19304 bp)

    Definition : Xanthomonas oryzae pv. oryzae DNA, hrp gene cluster 1 and 2 region.

    Publication :
    - Ochiai,H., Inoue,Y., Hasebe,A. and Kaku,H., "Construction and characterization of a Xanthomonas oryzae pv. oryzae bacterial artificial chromosome library", FEMS Microbiol. Lett. 200 (1), 59-65 (2001) PUBMED 11410350.

    - Ochiai,H., "Direct Submission", Submitted (28-JUN-2000) Hirokazu Ochiai, National Institute of Agrobiological Resources, Department of Genetic Resources I; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan (E-mail:ochiaih@abr.affrc.go.jp, Tel:81-298-38-7452, Fax:81-298-38-7408).


      





2) AB045312 (6203 bp)

    Definition : Xanthomonas oryzae pv. oryzae hrpF and hpaF genes, complete cds.

    Publication :
    - Ochiai,H., Inoue,Y., Hasebe,A. and Kaku,H., "Construction and characterization of a Xanthomonas oryzae pv. oryzae bacterial artificial chromosome library", FEMS Microbiol. Lett. 200 (1), 59-65 (2001) PUBMED 11410350.

    - Ochiai,H., "Direct Submission", Submitted (28-JUN-2000) Hirokazu Ochiai, National Institute of Agrobiological Resources, Department of Genetic Resources I; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan (E-mail:ochiaih@abr.affrc.go.jp, Tel:81-298-38-7452, Fax:81-298-38-7408).


      





• PAI-like regions homologous to this PAI (genomes and locations)

NC_015138 (Acidovorax avenae ATCC 19860): 0.6 Mb
NC_008752 (Acidovorax citrulli AAC00-1): 0.5 Mb
NC_015856 (Collimonas fungivorans Ter331): 5.1 Mb
NC_007645 (Hahella chejuensis KCTC 2396): 3.4 Mb
NC_003919 (Xanthomonas axonopodis 306): 0.5 Mb
NC_016010 (Xanthomonas axonopodis F1): 0.4 Mb
NC_020800 (Xanthomonas axonopodis Xac29-1): 0.5 Mb
NC_017271 (Xanthomonas campestris 756C): 1.5 Mb
NC_007086 (Xanthomonas campestris 8004): 3.6 Mb
NC_007508 (Xanthomonas campestris 85-10): 0.5 Mb
NC_003902 (Xanthomonas campestris ATCC 33913): 1.4 Mb
NC_010688 (Xanthomonas campestris B100): 3.5 Mb
NC_020815 (Xanthomonas citri Aw12879): 0.9 Mb
NC_017267 (Xanthomonas oryzae BLS256): 4.6 Mb
NC_006834 (Xanthomonas oryzae KACC10331): 0.1 Mb
NC_007705 (Xanthomonas oryzae MAFF 311018): 0.1 Mb
NC_010717 (Xanthomonas oryzae PXO99A): 0.1 Mb