PAI View

Pathogenicity Island: SCC15305cap

• General information

Name : SCC15305cap
Host strain : Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305
Function : SCC15305cap(capsular polysaccharide synthesis)
Insertion site : -

• GenBank accessions: 1 records

1) NC_007350_R2 (33086 bp)

Definition :

Publication :

Proc. Natl. Acad. Sci. U.S.A. 102 (37), 13272-13277 (2005) PUBMED 16135568

Submitted (20-AUG-2005) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA

Submitted (11-MAR-2005) Masahira Hattori, Kitasato Institute for Life Sciences; 1-15-1 Kitasato, Sagamihara, Kanagawa, 228-0829, Japan (E-mail:hattori@genome.ls.kitasato-u.ac.jp, URL:http://genome.ls.kitasato-u.ac.jp, Tel:81-42-778-8194)

Features:

No	Name	GenBank Accn	Position	Size(bp)	Strand	Virulence/Resistance	Description
1	SSP0041	YP_300131.1	1-1740	1740	+	Not tested	-
2	SSP0042	YP_300132.1	1782-3257	1476	+	Not tested	-
3	SSP0043	YP_300133.1	3484-4584	1101	+	Not tested	-
4	SSP0044	YP_300134.1	4945-6585	1641	+	Not tested	-
5	SSP0045	YP_300135.1	6578-6655	78	+	Not tested	-
6	SSP0046	YP_300136.1	6810-8492	1683	+	Not tested	-
7	SSP0047	YP_300137.1	8591-8929	339	+	Not tested	-
8	SSP0048	YP_300138.1	9025-9336	312	+	Not tested	-
9	SSP0049	YP_300139.1	9352-9858	507	+	Not tested	-
10	SSP0050	YP_300140.1	9878-10015	138	+	Not tested	-
11	SSP0051	YP_300141.1	10186-10389	204	+	Not tested	-
12	SSP0052	YP_300142.1	10515-11750	1236	-	Not tested	-
13	SSP0053	YP_300143.1	11743-13299	1557	-	Not tested	-
14	SSP0054	YP_300144.1	13413-16205	2793	-	Not tested	-
15	SSP0055	YP_300145.1	16462-17535	1074	+	Not tested	-
16	SSP0056	YP_300146.1	17570-18319	750	+	Not tested	-
17	SSP0057	YP_300147.1	18361-18867	507	+	Not tested	-
18	SSP0058	YP_300148.1	18864-19337	474	+	Not tested	-
19	SSP0059	YP_300149.1	19619-20482	864	+	Not tested	-
20	SSP0060	YP_300150.1	20852-21520	669	+	Not tested	-
21	SSP0061	YP_300151.1	21536-22228	693	+	Not tested	-
22	SSP0062	YP_300152.1	22228-22992	765	+	Not tested	-
23	SSP0063	YP_300153.1	23016-24851	1836	+	Not tested	-
24	SSP0064	YP_300154.1	24836-25600	765	+	Not tested	-
25	SSP0065	YP_300155.1	25597-26685	1089	+	Not tested	-
26	SSP0066	YP_300156.1	26675-27886	1212	+	Not tested	-
27	SSP0067	YP_300157.1	27886-29052	1167	+	Not tested	-
28	SSP0068	YP_300158.1	29207-30211	1005	+	Not tested	-
29	SSP0069	YP_300159.1	30265-31485	1221	-	Not tested	-
30	SSP0070	YP_300160.1	31656-32213	558	+	Not tested	-
31	SSP0071	YP_300161.1	32408-32752	345	+	Not tested	-
32	SSP0072	YP_300162.1	32883-33086	204	+	Not tested	-

• PAI-like regions homologous to this PAI (genomes and locations)

NC_003909 (Bacillus cereus ATCC 10987): 5.0 Mb
NC_004722 (Bacillus cereus ATCC 14579 ): 5.2 Mb
NC_018491 (Bacillus cereus FRI-35): 1.8 Mb
NC_020238 (Bacillus cereus HD73): 5.4 Mb
NC_015634 (Bacillus coagulans 2-6): 0.4 Mb
NC_013791 (Bacillus pseudofirmus OF4): 3.6 Mb
NC_014219 (Bacillus selenitireducens MLS10): 3.3 Mb
NC_014171 (Bacillus thuringiensis BMB171): 5.1 Mb
NC_018500 (Bacillus thuringiensis HD-771): 4.4 Mb
NC_018508 (Bacillus thuringiensis HD-789): 4.8 Mb
NC_017200 (Bacillus thuringiensis YBT-020): 5.1 Mb
NC_010184 (Bacillus weihenstephanensis KBAB4): 5.0 Mb
NC_018081 (Enterococcus hirae ATCC 9790): 1.8 Mb
NC_006510 (Geobacillus kaustophilus HTA426): 3.4 Mb
NC_014206 (Geobacillus sp. C56-T3): 3.5 Mb
NC_020210 (Geobacillus sp. GHH01): 3.4 Mb
NC_022080 (Geobacillus sp. JF8): 3.2 Mb
NC_014973 (Geobacter sp. M18): 1.8 Mb
NC_004193 (Oceanobacillus iheyensis HTE831): 3.0 Mb
NC_012121 (Staphylococcus carnosus TM300): 2.4 Mb
NC_007350 (Staphylococcus saprophyticus ATCC 15305): 0.0 Mb