PAI View

Pathogenicity Island: φSa3

• General information

Name : φSa3
Host strain : Staphylococcus aureus CN1
Function : chs, sak
Insertion site : -

• GenBank accessions: 1 records

1) NC_022226_P4 (41975 bp)

Definition :

Publication :

PLoS ONE 8 (8), E72803 (2013) PUBMED 23977354 REMARK Publication Status: Online-Only

Submitted (30-AUG-2013) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA

Submitted (04-DEC-2012) Laboratory of Human Bacterial Pathogenesis, NIAID/NIH, 9000 Rockville Pike, Bethesda, MD 20892, USA

Features:

No	Name	GenBank Accn	Position	Size(bp)	Strand	Virulence/Resistance	Description
1	SAKOR_01915	YP_008492103.1	1-180	180	+	Not tested	-
2	SAKOR_01916	YP_008492104.1	204-512	309	+	Not tested	-
3	SAKOR_01917	YP_008492105.1	491-751	261	+	Not tested	-
4	SAKOR_01918	YP_008492106.1	804-1052	249	-	Not tested	-
5	SAKOR_01919	YP_008492107.1	1016-1144	129	-	Not tested	-
6	SAKOR_01920	YP_008492108.1	1828-2277	450	+	Not tested	-
7	SAKOR_01921	YP_008492109.1	2372-2668	297	-	Not tested	-
8	SAKOR_01922	YP_008492110.1	2756-2911	156	+	Not tested	-
9	SAKOR_01923	YP_008492111.1	3357-3848	492	-	Not tested	-
10	SAKOR_01924	YP_008492112.1	4039-4794	756	-	Not tested	-
11	SAKOR_01925	YP_008492113.1	4806-5060	255	-	Virulence	-
12	SAKOR_01926	YP_008492114.1	5272-5406	135	-	Not tested	-
13	SAKOR_01927	YP_008492115.1	5598-5894	297	-	Not tested	-
14	SAKOR_01928	YP_008492116.1	5952-6239	288	-	Not tested	-
15	SAKOR_01929	YP_008492117.1	6286-6438	153	-	Not tested	-
16	SAKOR_01930	YP_008492118.1	6428-10213	3786	-	Not tested	-
17	SAKOR_01931	YP_008492119.1	10229-11713	1485	-	Not tested	-
18	SAKOR_01932	YP_008492120.1	11710-16239	4530	-	Not tested	-
19	SAKOR_01933	YP_008492121.1	16296-16457	162	-	Not tested	-
20	SAKOR_01934	YP_008492122.1	16484-16834	351	-	Not tested	-
21	SAKOR_01935	YP_008492123.1	16884-17024	141	-	Not tested	-
22	SAKOR_01936	YP_008492124.1	17150-17794	645	-	Not tested	-
23	SAKOR_01937	YP_008492125.1	17795-18202	408	-	Not tested	-
24	SAKOR_01938	YP_008492126.1	18199-18603	405	-	Not tested	-
25	SAKOR_01939	YP_008492127.1	18600-18962	363	-	Not tested	-
26	SAKOR_01940	YP_008492128.1	18946-19242	297	-	Not tested	-
27	SAKOR_01941	YP_008492129.1	19243-19503	261	-	Not tested	-
28	SAKOR_01942	YP_008492130.1	19523-20668	1146	-	Not tested	-
29	SAKOR_01943	YP_008492131.1	20692-21441	750	-	Not tested	-
30	SAKOR_01944	YP_008492132.1	21413-22600	1188	-	Not tested	-
31	SAKOR_01945	YP_008492133.1	22616-24277	1662	-	Not tested	-
32	SAKOR_01946	YP_008492134.1	24274-24663	390	-	Not tested	-
33	SAKOR_01947	YP_008492135.1	24606-24770	165	-	Not tested	-
34	SAKOR_01948	YP_008492136.1	24749-25048	300	-	Not tested	-
35	SAKOR_01949	YP_008492137.1	25280-25696	417	-	Not tested	-
36	SAKOR_01950	YP_008492138.1	25724-25924	201	-	Not tested	-
37	SAKOR_01951	YP_008492139.1	25924-26073	150	-	Not tested	-
38	SAKOR_01952	YP_008492140.1	26070-26465	396	-	Not tested	-
39	SAKOR_01953	YP_008492141.1	26453-26659	207	-	Not tested	-
40	SAKOR_01954	YP_008492142.1	26656-26901	246	-	Not tested	-
41	SAKOR_01955	YP_008492143.1	26938-27474	537	-	Not tested	-
42	SAKOR_01956	YP_008492144.1	27467-27655	189	-	Not tested	-
43	SAKOR_01957	YP_008492145.1	27624-27887	264	-	Not tested	-
44	SAKOR_01958	YP_008492146.1	27893-28135	243	-	Not tested	-
45	SAKOR_01959	YP_008492147.1	28139-28516	378	-	Not tested	-
46	SAKOR_01960	YP_008492148.1	28520-28936	417	-	Not tested	-
47	SAKOR_01961	YP_008492149.1	28933-29157	225	-	Not tested	-
48	SAKOR_01962	YP_008492150.1	29158-30057	900	-	Not tested	-
49	SAKOR_01963	YP_008492151.1	30081-30551	471	-	Not tested	-
50	SAKOR_01964	YP_008492152.1	30552-31037	486	-	Not tested	-
51	SAKOR_01965	YP_008492153.1	31250-32170	921	-	Not tested	-
52	SAKOR_01966	YP_008492154.1	32172-34127	1956	-	Not tested	-
53	SAKOR_01967	YP_008492155.1	34124-34402	279	-	Not tested	-
54	SAKOR_01968	YP_008492156.1	34396-34656	261	-	Not tested	-
55	SAKOR_01969	YP_008492157.1	34661-34963	303	-	Not tested	-
56	SAKOR_01970	YP_008492158.1	35058-35219	162	-	Not tested	-
57	SAKOR_01971	YP_008492159.1	35216-35575	360	-	Not tested	-
58	SAKOR_01972	YP_008492160.1	35585-35974	390	+	Not tested	-
59	SAKOR_01973	YP_008492161.1	35961-36158	198	-	Not tested	-
60	SAKOR_01974	YP_008492162.1	36174-36926	753	-	Not tested	-
61	SAKOR_01975	YP_008492163.1	36977-37306	330	+	Not tested	-
62	SAKOR_01976	YP_008492164.1	37295-37510	216	-	Not tested	-
63	SAKOR_01977	YP_008492165.1	37507-37788	282	-	Not tested	-
64	SAKOR_01978	YP_008492166.1	37785-37973	189	-	Not tested	-
65	SAKOR_01979	YP_008492167.1	37921-38634	714	+	Not tested	-
66	SAKOR_01980	YP_008492168.1	38644-39582	939	+	Not tested	-
67	SAKOR_01981	YP_008492169.1	39588-39929	342	+	Not tested	-
68	SAKOR_01982	YP_008492170.1	40112-40315	204	+	Not tested	-
69	SAKOR_01983	YP_008492171.1	40409-40879	471	+	Not tested	-
70	SAKOR_01984	YP_008492172.1	40914-41975	1062	+	Not tested	-

• PAI-like regions homologous to this PAI (genomes and locations)

NC_017340 (Staphylococcus aureus 04-02981): 2.0 Mb
NC_018608 (Staphylococcus aureus 08BA02176): 0.4 Mb
NC_017351 (Staphylococcus aureus 11819-97): 0.6, 2.1 Mb
NC_022113 (Staphylococcus aureus 55/2053): 1.5, 2.0 Mb
NC_022222 (Staphylococcus aureus 6850): 0.7 Mb
NC_017673 (Staphylococcus aureus 71193): 1.9 Mb
NC_021670 (Staphylococcus aureus Bmb9393): 2.2 Mb
NC_021554 (Staphylococcus aureus CA-347): 1.5, 2.1 Mb
NC_022226 (Staphylococcus aureus CN1): 2.0 Mb
NC_002951 (Staphylococcus aureus COL): 0.4 Mb
NC_017343 (Staphylococcus aureus ECT-R 2): 2.0 Mb
NC_017337 (Staphylococcus aureus ED133): 0.3, 1.1, 2.0 Mb
NC_013450 (Staphylococcus aureus ED98): 2.0 Mb
NC_007793 (Staphylococcus aureus FPR3757): 1.5, 2.1 Mb
NC_017763 (Staphylococcus aureus HO 5096 0412): 1.5, 2.0 Mb
NC_009632 (Staphylococcus aureus JH1): 1.1, 2.1 Mb
NC_009487 (Staphylococcus aureus JH9): 1.1, 2.1 Mb
NC_017338 (Staphylococcus aureus JKD6159): 1.5, 2.0 Mb
NC_016928 (Staphylococcus aureus M013): 1.5, 1.9 Mb
NC_021059 (Staphylococcus aureus M1): 1.5, 2.1 Mb
NC_002952 (Staphylococcus aureus MRSA252): 1.6, 2.1 Mb
NC_016941 (Staphylococcus aureus MSHR1132): 2.0 Mb
NC_002953 (Staphylococcus aureus MSSA476): 1.0, 2.0 Mb
NC_009782 (Staphylococcus aureus Mu3): 0.9, 2.1 Mb
NC_002758 (Staphylococcus aureus Mu50): 0.9, 2.1 Mb
NC_003923 (Staphylococcus aureus MW2): 1.5, 2.0 Mb
NC_002745 (Staphylococcus aureus N315): 2.0 Mb
NC_007795 (Staphylococcus aureus NCTC 8325): 1.5, 2.0 Mb
NC_009641 (Staphylococcus aureus Newman): 1.1, 2.0, 2.1 Mb
NC_022442 (Staphylococcus aureus SA957): 1.5, 1.9 Mb
NC_020536 (Staphylococcus aureus ST228): 2.0 Mb
NC_020566 (Staphylococcus aureus ST228): 2.0 Mb
NC_020568 (Staphylococcus aureus ST228): 2.0 Mb
NC_020529 (Staphylococcus aureus ST228 (isolate=10388)): 2.0 Mb
NC_020564 (Staphylococcus aureus ST228 (isolate=10497)): 2.0 Mb
NC_020532 (Staphylococcus aureus ST228 (isolate=15532)): 2.0 Mb
NC_020533 (Staphylococcus aureus ST228 (isolate=16035)): 2.0 Mb
NC_020537 (Staphylococcus aureus ST228 (isolate=18412)): 2.0 Mb
NC_017333 (Staphylococcus aureus ST398): 0.4, 1.6 Mb
NC_017347 (Staphylococcus aureus T0131): 2.1 Mb
NC_010079 (Staphylococcus aureus TCH1516): 1.6, 2.1 Mb
NC_017342 (Staphylococcus aureus TCH60): 1.3, 1.7 Mb
NC_017331 (Staphylococcus aureus TW20): 2.1 Mb