PAI View

Pathogenicity Island: φSa3

• General information

Name : φSa3
Host strain : Staphylococcus aureus FPR3757
Function : chs, sak
Insertion site : -

• GenBank accessions: 1 records

1) NC_007793_P6 (43035 bp)

Definition :

Publication :

Lancet 367 (9512), 731-739 (2006) PUBMED 16517273

Submitted (11-FEB-2006) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA

Submitted (30-JAN-2006) Department of Medicine, University of California, San Francisco, San Francisco, CA 94143, USA

Features:

No	Name	GenBank Accn	Position	Size(bp)	Strand	Virulence/Resistance	Description
1	SAUSA300_1919	YP_494570.1	1247-1597	351	-	Not tested	-
2	chs	YP_494571.1	2282-2731	450	+	Not tested	-
3	SAUSA300_1921	YP_494572.1	2826-3122	297	-	Not tested	-
4	sak	YP_494573.1	3811-4302	492	-	Virulence	-
5	SAUSA300_1923	YP_494574.1	4493-5248	756	-	Not tested	-
6	SAUSA300_1924	YP_494575.1	5260-5514	255	-	Virulence	-
7	SAUSA300_1925	YP_494576.1	6052-6348	297	-	Not tested	-
8	SAUSA300_1926	YP_494577.1	6406-6693	288	-	Not tested	-
9	SAUSA300_1927	YP_494578.1	6740-6892	153	-	Not tested	-
10	SAUSA300_1928	YP_494579.1	6882-10667	3786	-	Not tested	-
11	SAUSA300_1929	YP_494580.1	10683-12167	1485	-	Not tested	-
12	SAUSA300_1930	YP_494581.1	12164-16693	4530	-	Not tested	-
13	SAUSA300_1931	YP_494582.1	16750-16911	162	-	Not tested	-
14	SAUSA300_1932	YP_494583.1	16938-17288	351	-	Not tested	-
15	SAUSA300_1933	YP_494584.1	17338-17478	141	-	Not tested	-
16	SAUSA300_1934	YP_494585.1	17604-18248	645	-	Not tested	-
17	SAUSA300_1935	YP_494586.1	18653-19057	405	-	Not tested	-
18	SAUSA300_1936	YP_494587.1	19054-19416	363	-	Not tested	-
19	SAUSA300_1937	YP_494588.1	19674-19958	285	-	Not tested	-
20	SAUSA300_1938	YP_494589.1	19978-21123	1146	-	Not tested	-
21	SAUSA300_1939	YP_494590.1	21147-21884	738	-	Not tested	-
22	SAUSA300_1940	YP_494591.1	21868-23055	1188	-	Not tested	-
23	SAUSA300_1941	YP_494592.1	23071-24732	1662	-	Not tested	-
24	SAUSA300_1942	YP_494593.1	24729-25163	435	-	Not tested	-
25	SAUSA300_1943	YP_494594.1	25203-25502	300	-	Not tested	-
26	SAUSA300_1944	YP_494595.1	25734-26069	336	-	Not tested	-
27	SAUSA300_1945	YP_494596.1	26178-26378	201	-	Not tested	-
28	SAUSA300_1946	YP_494597.1	26378-26527	150	-	Not tested	-
29	SAUSA300_1947	YP_494598.1	26524-26910	387	-	Not tested	-
30	SAUSA300_1948	YP_494599.1	26907-27113	207	-	Not tested	-
31	dut	YP_494600.1	27392-27925	534	-	Not tested	-
32	SAUSA300_1950	YP_494601.1	27918-28160	243	-	Not tested	-
33	SAUSA300_1951	YP_494602.1	28150-28386	237	-	Not tested	-
34	SAUSA300_1952	YP_494603.1	28379-28750	372	-	Not tested	-
35	SAUSA300_1953	YP_494604.1	28759-29001	243	-	Not tested	-
36	SAUSA300_1954	YP_494605.1	29005-29382	378	-	Not tested	-
37	SAUSA300_1955	YP_494606.1	29386-29790	405	-	Not tested	-
38	SAUSA300_1956	YP_494607.1	29799-30017	219	-	Not tested	-
39	SAUSA300_1957	YP_494608.1	30024-30917	894	-	Not tested	-
40	SAUSA300_1958	YP_494609.1	30947-31417	471	-	Not tested	-
41	SAUSA300_1959	YP_494610.1	31418-31903	486	-	Not tested	-
42	SAUSA300_1960	YP_494611.1	32116-33036	921	-	Not tested	-
43	SAUSA300_1961	YP_494612.1	33038-34993	1956	-	Not tested	-
44	SAUSA300_1962	YP_494613.1	35262-35522	261	-	Not tested	-
45	SAUSA300_1963	YP_494614.1	35562-35822	261	-	Not tested	-
46	SAUSA300_1964	YP_494615.1	36075-36395	321	-	Not tested	-
47	SAUSA300_1965	YP_494616.1	36445-36684	240	+	Not tested	-
48	SAUSA300_1966	YP_494617.1	36873-37625	753	-	Not tested	-
49	SAUSA300_1967	YP_494618.1	37676-38005	330	+	Not tested	-
50	SAUSA300_1968	YP_494619.1	38225-38674	450	-	Not tested	-
51	SAUSA300_1969	YP_494620.1	38622-39335	714	+	Not tested	-
52	SAUSA300_1970	YP_494621.1	39351-40283	933	+	Not tested	-
53	SAUSA300_1971	YP_494622.1	41094-41807	714	+	Not tested	-
54	int	YP_494623.1	41998-43035	1038	+	Not tested	-

• PAI-like regions homologous to this PAI (genomes and locations)

NC_017340 (Staphylococcus aureus 04-02981): 2.0 Mb
NC_018608 (Staphylococcus aureus 08BA02176): 0.4 Mb
NC_017351 (Staphylococcus aureus 11819-97): 0.6, 1.6, 2.1 Mb
NC_022113 (Staphylococcus aureus 55/2053): 1.5, 2.0 Mb
NC_022222 (Staphylococcus aureus 6850): 0.7 Mb
NC_017673 (Staphylococcus aureus 71193): 1.9 Mb
NC_021670 (Staphylococcus aureus Bmb9393): 2.2 Mb
NC_021554 (Staphylococcus aureus CA-347): 1.5, 2.1 Mb
NC_022226 (Staphylococcus aureus CN1): 2.0 Mb
NC_002951 (Staphylococcus aureus COL): 0.4 Mb
NC_017343 (Staphylococcus aureus ECT-R 2): 2.0 Mb
NC_017337 (Staphylococcus aureus ED133): 0.3, 1.1, 2.0 Mb
NC_013450 (Staphylococcus aureus ED98): 2.0 Mb
NC_007793 (Staphylococcus aureus FPR3757): 1.5, 2.1 Mb
NC_017763 (Staphylococcus aureus HO 5096 0412): 2.0 Mb
NC_009632 (Staphylococcus aureus JH1): 1.1, 2.1 Mb
NC_009487 (Staphylococcus aureus JH9): 1.1, 2.1 Mb
NC_017338 (Staphylococcus aureus JKD6159): 1.5, 2.0 Mb
NC_016928 (Staphylococcus aureus M013): 1.5 Mb
NC_021059 (Staphylococcus aureus M1): 2.1 Mb
NC_002952 (Staphylococcus aureus MRSA252): 2.1 Mb
NC_016941 (Staphylococcus aureus MSHR1132): 2.0 Mb
NC_002953 (Staphylococcus aureus MSSA476): 2.0 Mb
NC_009782 (Staphylococcus aureus Mu3): 0.9, 2.1 Mb
NC_002758 (Staphylococcus aureus Mu50): 0.9, 2.1 Mb
NC_003923 (Staphylococcus aureus MW2): 2.0 Mb
NC_002745 (Staphylococcus aureus N315): 2.0 Mb
NC_007795 (Staphylococcus aureus NCTC 8325): 2.0 Mb
NC_009641 (Staphylococcus aureus Newman): 2.0, 2.1 Mb
NC_022442 (Staphylococcus aureus SA957): 1.5 Mb
NC_020536 (Staphylococcus aureus ST228): 2.0 Mb
NC_020566 (Staphylococcus aureus ST228): 2.0 Mb
NC_020568 (Staphylococcus aureus ST228): 2.0 Mb
NC_020529 (Staphylococcus aureus ST228 (isolate=10388)): 2.0 Mb
NC_020564 (Staphylococcus aureus ST228 (isolate=10497)): 2.0 Mb
NC_020532 (Staphylococcus aureus ST228 (isolate=15532)): 2.0 Mb
NC_020533 (Staphylococcus aureus ST228 (isolate=16035)): 2.0 Mb
NC_020537 (Staphylococcus aureus ST228 (isolate=18412)): 2.0 Mb
NC_017333 (Staphylococcus aureus ST398): 0.4, 1.6 Mb
NC_017347 (Staphylococcus aureus T0131): 2.1 Mb
NC_010079 (Staphylococcus aureus TCH1516): 1.6, 2.1 Mb
NC_017342 (Staphylococcus aureus TCH60): 1.3, 1.7 Mb
NC_017331 (Staphylococcus aureus TW20): 2.1 Mb