Publication : - Guinane,C.M., Ben Zakour,N.L., Tormo-Mas,M.A., Weinert,L.A., Lowder,B.V., Cartwright,R.A., Smyth,D.S., Smyth,C.J., Lindsay,J.A., Gould,K.A., Witney,A., Hinds,J., Bollback,J.P., Rambaut,A., Penades,J.R. and Fitzgerald,J.R., "Evolutionary genomics of Staphylococcus aureus reveals insights into the origin and molecular basis of ruminant host adaptation", Genome Biol Evol 2, 454-466 (2010) PUBMED 20624747 REMARK Publication Status: Online-Only. - Guinane,C.M., Ben Zakour,N.L., Tormo-Mas,M.A., Weinert,L.A., Lowder,B.V., Cartwright,R.A., Smyth,D.S., Smyth,C.J., Lindsay,J.A., Gould,K.A., Witney,A., Hinds,J., Bollback,J.P., Rambaut,A., Penades,J.R. and Fitzgerald,J.R., "Direct Submission", Submitted (05-APR-2012) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA. - Guinane,C.M., Ben Zakour,N.L., Tormo-Mas,M.A., Weinert,L.A., Lowder,B.V., Cartwright,R.A., Smyth,D.S., Smyth,C.J., Lindsay,J., Gould,K.A., Witney,A., Hinds,J., Bollback,J.P., Rambaut,A., Penades,J. and Fitzgerald,J.R., "Direct Submission", Submitted (29-MAR-2010) The Roslin Institute and Centre for Infectious Diseases, Royal (Dick) School of Veterinary Studies, University of Edinburgh, The Chancellor's Building, New Royal Infirmary, 49 Little France Crescent, Edinburgh EH16 4SB, United King. |
| No | Name | GenBank Accn | Position | Size(bp) | Strand | Virulence/Resistance | Description |
| 1 | SAOV_0274 | YP_005735791.1 | 1-1206 | 1206 | - | Not tested | - |
| 2 | SAOV_0275 | YP_005735792.1 | 1309-1959 | 651 | - | Not tested | - |
| 3 | SAOV_0276 | YP_005735793.1 | 2102-2227 | 126 | - | Not tested | - |
| 4 | SAOV_0277 | YP_005735794.1 | 2432-2866 | 435 | - | Not tested | - |
| 5 | SAOV_0278 | YP_005735795.1 | 2884-3255 | 372 | - | Not tested | - |
| 6 | SAOV_0279 | YP_005735796.1 | 3358-3687 | 330 | - | Not tested | - |
| 7 | SAOV_0280 | YP_005735797.1 | 3848-4039 | 192 | + | Not tested | - |
| 8 | SAOV_0281 | YP_005735798.1 | 4127-4303 | 177 | + | Not tested | - |
| 9 | SAOV_0282 | YP_005735799.1 | 4300-4530 | 231 | - | Not tested | - |
| 10 | SAOV_0283 | YP_005735800.1 | 4587-5339 | 753 | + | Not tested | - |
| 11 | SAOV_0284 | YP_005735801.1 | 5355-5552 | 198 | + | Not tested | - |
| 12 | SAOV_0285 | YP_005735802.1 | 5698-5961 | 264 | + | Not tested | - |
| 13 | SAOV_0286 | YP_005735803.1 | 6238-6540 | 303 | + | Not tested | - |
| 14 | SAOV_0287 | YP_005735804.1 | 6545-6805 | 261 | + | Not tested | - |
| 15 | SAOV_0288 | YP_005735805.1 | 6815-7036 | 222 | + | Not tested | - |
| 16 | SAOV_0289 | YP_005735806.1 | 7029-7652 | 624 | + | Not tested | - |
| 17 | SAOV_0290 | YP_005735807.1 | 7652-8071 | 420 | + | Not tested | - |
| 18 | SAOV_0291 | YP_005735808.1 | 8085-8780 | 696 | + | Not tested | - |
| 19 | SAOV_0292 | YP_005735809.1 | 8752-9552 | 801 | + | Not tested | - |
| 20 | SAOV_0293 | YP_005735810.1 | 9552-9908 | 357 | + | Not tested | - |
| 21 | SAOV_0294 | YP_005735811.1 | 9905-11146 | 1242 | + | Not tested | - |
| 22 | SAOV_0295 | YP_005735812.1 | 11143-11358 | 216 | + | Not tested | - |
| 23 | SAOV_0296 | YP_005735813.1 | 11361-11582 | 222 | + | Not tested | - |
| 24 | SAOV_0297 | YP_005735814.1 | 11592-11999 | 408 | + | Not tested | - |
| 25 | SAOV_0298 | YP_005735815.1 | 11999-12184 | 186 | + | Not tested | - |
| 26 | SAOV_0299 | YP_005735816.1 | 12185-12442 | 258 | + | Not tested | - |
| 27 | SAOV_0300 | YP_005735817.1 | 12454-12825 | 372 | + | Not tested | - |
| 28 | SAOV_0301 | YP_005735818.1 | 12826-13074 | 249 | + | Not tested | - |
| 29 | SAOV_0302 | YP_005735819.1 | 13085-13294 | 210 | + | Not tested | - |
| 30 | SAOV_0303 | YP_005735820.1 | 13297-13707 | 411 | + | Not tested | - |
| 31 | SAOV_0304 | YP_005735821.1 | 13707-13982 | 276 | + | Not tested | - |
| 32 | SAOV_0305 | YP_005735822.1 | 13975-14223 | 249 | + | Not tested | - |
| 33 | SAOV_0306 | YP_005735823.1 | 14216-14752 | 537 | + | Not tested | - |
| 34 | SAOV_0307 | YP_005735824.1 | 14789-15073 | 285 | + | Not tested | - |
| 35 | SAOV_0308 | YP_005735825.1 | 15090-15296 | 207 | + | Not tested | - |
| 36 | SAOV_0309 | YP_005735826.1 | 15293-15499 | 207 | + | Not tested | - |
| 37 | SAOV_0310 | YP_005735827.1 | 15496-15648 | 153 | + | Not tested | - |
| 38 | SAOV_0311 | YP_005735828.1 | 15716-15916 | 201 | + | Not tested | - |
| 39 | SAOV_0312 | YP_005735829.1 | 15965-18412 | 2448 | + | Virulence | - |
| 40 | SAOV_0313 | YP_005735830.1 | 18753-19043 | 291 | + | Not tested | - |
| 41 | SAOV_0314 | YP_005735831.1 | 19024-20391 | 1368 | + | Not tested | - |
| 42 | SAOV_0315 | YP_005735832.1 | 20404-20841 | 438 | + | Not tested | - |
| 43 | SAOV_0316 | YP_005735833.1 | 20998-21312 | 315 | + | Not tested | - |
| 44 | SAOV_0317 | YP_005735834.1 | 21422-21745 | 324 | + | Not tested | - |
| 45 | SAOV_0318 | YP_005735835.1 | 21735-23426 | 1692 | + | Not tested | - |
| 46 | SAOV_0319 | YP_005735836.1 | 23431-24459 | 1029 | + | Not tested | - |
| 47 | SAOV_0320 | YP_005735837.1 | 24652-25425 | 774 | + | Not tested | - |
| 48 | SAOV_0321 | YP_005735838.1 | 25437-26600 | 1164 | + | Not tested | - |
| 49 | SAOV_0322 | YP_005735839.1 | 26669-26947 | 279 | + | Not tested | - |
| 50 | SAOV_0323 | YP_005735840.1 | 26959-27291 | 333 | + | Not tested | - |
| 51 | SAOV_0324 | YP_005735841.1 | 27288-27689 | 402 | + | Not tested | - |
| 52 | SAOV_0325 | YP_005735842.1 | 27690-28085 | 396 | + | Not tested | - |
| 53 | SAOV_0326 | YP_005735843.1 | 28120-28761 | 642 | + | Not tested | - |
| 54 | SAOV_0327 | YP_005735844.1 | 28853-29308 | 456 | + | Not tested | - |
| 55 | SAOV_0328 | YP_005735845.1 | 29335-29685 | 351 | + | Not tested | - |
| 56 | SAOV_0329 | YP_005735846.1 | 29727-29885 | 159 | + | Not tested | - |
| 57 | SAOV_0330 | YP_005735847.1 | 29899-32946 | 3048 | + | Not tested | - |
| 58 | SAOV_0331 | YP_005735848.1 | 32898-36098 | 3201 | + | Not tested | - |
| 59 | SAOV_0332 | YP_005735849.1 | 36098-36922 | 825 | + | Not tested | - |
| 60 | SAOV_0333 | YP_005735850.1 | 36931-38514 | 1584 | + | Not tested | - |
| 61 | SAOV_0334 | YP_005735851.1 | 38514-38804 | 291 | + | Not tested | - |
| 62 | SAOV_0335 | YP_005735852.1 | 38820-40730 | 1911 | + | Not tested | - |
| 63 | SAOV_0336 | YP_005735853.1 | 40730-42196 | 1467 | + | Not tested | - |
| 64 | SAOV_0337 | YP_005735854.1 | 42196-42585 | 390 | + | Not tested | - |
| 65 | SAOV_0338 | YP_005735855.1 | 42578-42742 | 165 | + | Not tested | - |
| 66 | SAOV_0339 | YP_005735856.1 | 42788-43087 | 300 | + | Not tested | - |
| 67 | SAOV_0340 | YP_005735857.1 | 43230-43337 | 108 | + | Not tested | - |
| 68 | SAOV_0341 | YP_005735858.1 | 43626-43928 | 303 | + | Not tested | - |
| 69 | SAOV_0342 | YP_005735859.1 | 43940-45394 | 1455 | + | Not tested | - |
|
NC_011660 (Listeria monocytogenes HCC23): 2.6 Mb NC_017529 (Listeria monocytogenes L99): 0.1 Mb NC_017537 (Listeria monocytogenes M7): 0.1 Mb NC_017340 (Staphylococcus aureus 04-02981): 2.0 Mb NC_018608 (Staphylococcus aureus 08BA02176): 0.4 Mb NC_017351 (Staphylococcus aureus 11819-97): 0.6, 1.6, 2.1 Mb NC_022113 (Staphylococcus aureus 55/2053): 1.5, 2.0 Mb NC_017673 (Staphylococcus aureus 71193): 1.9 Mb NC_021670 (Staphylococcus aureus Bmb9393): 1.2, 2.2 Mb NC_021554 (Staphylococcus aureus CA-347): 1.5, 2.1 Mb NC_022226 (Staphylococcus aureus CN1): 2.0 Mb NC_002951 (Staphylococcus aureus COL): 0.4 Mb NC_017343 (Staphylococcus aureus ECT-R 2): 2.0 Mb NC_017337 (Staphylococcus aureus ED133): 0.3, 1.1, 2.0 Mb NC_013450 (Staphylococcus aureus ED98): 2.0 Mb NC_007793 (Staphylococcus aureus FPR3757): 1.5, 2.1 Mb NC_017763 (Staphylococcus aureus HO 5096 0412): 1.5, 2.0 Mb NC_009632 (Staphylococcus aureus JH1): 1.1, 2.1 Mb NC_009487 (Staphylococcus aureus JH9): 1.1, 2.1 Mb NC_017338 (Staphylococcus aureus JKD6159): 1.5, 2.0 Mb NC_017349 (Staphylococcus aureus LGA251): 0.9 Mb NC_016928 (Staphylococcus aureus M013): 1.5 Mb NC_021059 (Staphylococcus aureus M1): 1.5, 2.1 Mb NC_002952 (Staphylococcus aureus MRSA252): 1.6, 2.1 Mb NC_016941 (Staphylococcus aureus MSHR1132): 2.0 Mb NC_002953 (Staphylococcus aureus MSSA476): 1.0 Mb NC_009782 (Staphylococcus aureus Mu3): 0.9, 2.1 Mb NC_002758 (Staphylococcus aureus Mu50): 0.9, 2.1 Mb NC_003923 (Staphylococcus aureus MW2): 1.5 Mb NC_002745 (Staphylococcus aureus N315): 2.0 Mb NC_007795 (Staphylococcus aureus NCTC 8325): 1.5, 1.9, 2.0 Mb NC_009641 (Staphylococcus aureus Newman): 0.4, 1.1, 2.0, 2.1 Mb NC_007622 (Staphylococcus aureus RF122): 0.3 Mb NC_022442 (Staphylococcus aureus SA957): 1.5 Mb NC_020536 (Staphylococcus aureus ST228): 2.0 Mb NC_020566 (Staphylococcus aureus ST228): 2.0 Mb NC_020568 (Staphylococcus aureus ST228): 2.0 Mb NC_020529 (Staphylococcus aureus ST228 (isolate=10388)): 2.0 Mb NC_020564 (Staphylococcus aureus ST228 (isolate=10497)): 2.0 Mb NC_020532 (Staphylococcus aureus ST228 (isolate=15532)): 2.0 Mb NC_020533 (Staphylococcus aureus ST228 (isolate=16035)): 2.0 Mb NC_020537 (Staphylococcus aureus ST228 (isolate=18412)): 2.0 Mb NC_017333 (Staphylococcus aureus ST398): 0.4, 1.6 Mb NC_017347 (Staphylococcus aureus T0131): 2.1 Mb NC_010079 (Staphylococcus aureus TCH1516): 1.6, 2.1 Mb NC_017342 (Staphylococcus aureus TCH60): 1.7 Mb NC_017331 (Staphylococcus aureus TW20): 2.1 Mb |
