PAI View

Pathogenicity Island: vSaα

• General information

Name : vSaα
Host strain : Staphylococcus aureus CN1
Function : set
Insertion site : -

• GenBank accessions: 1 records

1) NC_022226_P1 (35276 bp)

Definition :

Publication :

PLoS ONE 8 (8), E72803 (2013) PUBMED 23977354 REMARK Publication Status: Online-Only

Submitted (30-AUG-2013) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA

Submitted (04-DEC-2012) Laboratory of Human Bacterial Pathogenesis, NIAID/NIH, 9000 Rockville Pike, Bethesda, MD 20892, USA

Features:

No	Name	GenBank Accn	Position	Size(bp)	Strand	Virulence/Resistance	Description
1	SAKOR_00390	YP_008490574.1	1-1155	1155	+	Virulence	-
2	SAKOR_00391	YP_008490575.1	1602-1784	183	+	Not tested	-
3	SAKOR_00392	YP_008490576.1	1950-2351	402	-	Not tested	-
4	SAKOR_00393	YP_008490577.1	2364-2510	147	-	Not tested	-
5	SAKOR_00394	YP_008490578.1	3397-3819	423	-	Not tested	-
6	SAKOR_00395	YP_008490579.1	3820-4629	810	-	Not tested	-
7	SAKOR_00396	YP_008490580.1	4626-5378	753	-	Not tested	-
8	SAKOR_00397	YP_008490581.1	5967-6812	846	+	Resistance	-
9	SAKOR_00398	YP_008490582.1	7088-7645	558	+	Not tested	-
10	SAKOR_00399	YP_008490583.1	8245-8430	186	-	Not tested	-
11	SAKOR_00400	YP_008490584.1	8487-8909	423	-	Not tested	-
12	SAKOR_00401	YP_008490585.1	8812-8973	162	-	Not tested	-
13	SAKOR_00402	YP_008490586.1	9488-9847	360	-	Not tested	-
14	SAKOR_00403	YP_008490587.1	9866-10711	846	-	Not tested	-
15	SAKOR_00404	YP_008490588.1	11168-11863	696	+	Virulence	-
16	SAKOR_00405	YP_008490589.1	12091-12846	756	+	Virulence	-
17	SAKOR_00406	YP_008490590.1	13122-14207	1086	+	Virulence	-
18	SAKOR_00407	YP_008490591.1	14326-14463	138	+	Not tested	-
19	SAKOR_00408	YP_008490592.1	14557-15498	942	+	Virulence	-
20	SAKOR_00409	YP_008490593.1	15847-16566	720	+	Virulence	-
21	SAKOR_00410	YP_008490594.1	16997-17692	696	+	Virulence	-
22	SAKOR_00411	YP_008490595.1	18016-18729	714	+	Virulence	-
23	SAKOR_00412	YP_008490596.1	19094-19807	714	+	Virulence	-
24	SAKOR_00413	YP_008490597.1	20158-20856	699	+	Virulence	-
25	SAKOR_00414	YP_008490598.1	20909-21067	159	+	Not tested	-
26	SAKOR_00415	YP_008490599.1	21120-22676	1557	+	Not tested	-
27	SAKOR_00416	YP_008490600.1	22669-23838	1170	+	Not tested	-
28	SAKOR_00417	YP_008490601.1	24240-24923	684	+	Not tested	-
29	SAKOR_00418	YP_008490602.1	24943-26433	1491	+	Not tested	-
30	SAKOR_00419	YP_008490603.1	26539-26856	318	-	Not tested	-
31	SAKOR_00420	YP_008490604.1	27184-28002	819	+	Not tested	-
32	SAKOR_00421	YP_008490605.1	28021-28791	771	+	Not tested	-
33	SAKOR_00422	YP_008490606.1	28851-29678	828	+	Not tested	-
34	SAKOR_00423	YP_008490607.1	29717-30517	801	+	Not tested	-
35	SAKOR_00424	YP_008490608.1	30536-31315	780	+	Not tested	-
36	SAKOR_00425	YP_008490609.1	31367-32167	801	+	Not tested	-
37	SAKOR_00426	YP_008490610.1	32186-32761	576	+	Not tested	-
38	SAKOR_00427	YP_008490611.1	32689-32967	279	+	Not tested	-
39	SAKOR_00428	YP_008490612.1	33101-33961	861	+	Not tested	-
40	SAKOR_00429	YP_008490613.1	33945-35276	1332	+	Not tested	-
41	SAKOR_00430	YP_008490614.1	35273-35596	324	+	Not tested	-

• PAI-like regions homologous to this PAI (genomes and locations)

NC_017340 (Staphylococcus aureus 04-02981): 0.4 Mb
NC_018608 (Staphylococcus aureus 08BA02176): 0.5 Mb
NC_017351 (Staphylococcus aureus 11819-97): 0.1, 0.4 Mb
NC_022113 (Staphylococcus aureus 55/2053): 0.4 Mb
NC_022222 (Staphylococcus aureus 6850): 0.1, 0.4, 2.5 Mb
NC_017673 (Staphylococcus aureus 71193): 0.4 Mb
NC_021670 (Staphylococcus aureus Bmb9393): 0.5 Mb
NC_021554 (Staphylococcus aureus CA-347): 0.4 Mb
NC_022226 (Staphylococcus aureus CN1): 0.1 Mb
NC_002951 (Staphylococcus aureus COL): 0.1, 0.5 Mb
NC_017343 (Staphylococcus aureus ECT-R 2): 0.4 Mb
NC_017337 (Staphylococcus aureus ED133): 0.4 Mb
NC_013450 (Staphylococcus aureus ED98): 0.4 Mb
NC_007793 (Staphylococcus aureus FPR3757): 0.1, 0.4 Mb
NC_017763 (Staphylococcus aureus HO 5096 0412): 0.4 Mb
NC_009632 (Staphylococcus aureus JH1): 0.5 Mb
NC_009487 (Staphylococcus aureus JH9): 0.5 Mb
NC_017341 (Staphylococcus aureus JKD6008): 0.5 Mb
NC_017338 (Staphylococcus aureus JKD6159): 0.4 Mb
NC_017349 (Staphylococcus aureus LGA251): 0.4 Mb
NC_016928 (Staphylococcus aureus M013): 0.4 Mb
NC_021059 (Staphylococcus aureus M1): 0.1, 0.4 Mb
NC_002952 (Staphylococcus aureus MRSA252): 0.4 Mb
NC_016941 (Staphylococcus aureus MSHR1132): 0.1, 0.4 Mb
NC_002953 (Staphylococcus aureus MSSA476): 0.1, 0.4 Mb
NC_009782 (Staphylococcus aureus Mu3): 0.5 Mb
NC_002758 (Staphylococcus aureus Mu50): 0.5 Mb
NC_003923 (Staphylococcus aureus MW2): 0.1, 0.4 Mb
NC_002745 (Staphylococcus aureus N315): 0.4 Mb
NC_007795 (Staphylococcus aureus NCTC 8325): 0.1, 0.4 Mb
NC_009641 (Staphylococcus aureus Newman): 0.1, 0.4 Mb
NC_007622 (Staphylococcus aureus RF122): 0.4 Mb
NC_022443 (Staphylococcus aureus SA40): 0.4 Mb
NC_022442 (Staphylococcus aureus SA957): 0.4 Mb
NC_020536 (Staphylococcus aureus ST228): 0.4 Mb
NC_020566 (Staphylococcus aureus ST228): 0.4 Mb
NC_020568 (Staphylococcus aureus ST228): 0.4 Mb
NC_020529 (Staphylococcus aureus ST228 (isolate=10388)): 0.4 Mb
NC_020564 (Staphylococcus aureus ST228 (isolate=10497)): 0.4 Mb
NC_020532 (Staphylococcus aureus ST228 (isolate=15532)): 0.4 Mb
NC_020533 (Staphylococcus aureus ST228 (isolate=16035)): 0.4 Mb
NC_020537 (Staphylococcus aureus ST228 (isolate=18412)): 0.4 Mb
NC_017333 (Staphylococcus aureus ST398): 0.5 Mb
NC_017347 (Staphylococcus aureus T0131): 0.5 Mb
NC_010079 (Staphylococcus aureus TCH1516): 0.1, 0.4 Mb
NC_017342 (Staphylococcus aureus TCH60): 0.1 Mb
NC_017331 (Staphylococcus aureus TW20): 0.5 Mb
NC_016912 (Staphylococcus aureus VC40): 0.1, 0.4 Mb