Publication : - Moss,J.E., Cardozo,T.J., Zychlinsky,A. and Groisman,E.A., "The selC-associated SHI-2 pathogenicity island of Shigella flexneri", Mol. Microbiol. 33 (1), 74-83 (1999) PUBMED 10411725. - Moss,J.E., Groisman,E.A. and Zychlinsky,A., "Direct Submission", Submitted (07-APR-1999) Microbiology, NYU Medical Center, 540 First Avenue, New York, NY 10016, USA. |
| No | Name | GenBank Accn | Position | Size(bp) | Strand | Virulence/Resistance | Description |
| 1 | int | AAD44730.1 | 285-1469 | 1185 | + | Not tested | - |
| 2 | shiA | AAD44731.1 | 1881-2924 | 1044 | + | Virulence | - |
| 3 | shiB | AAD44732.1 | 3439-3900 | 462 | + | Virulence | - |
| 4 | tnpA | AAD44733.1 | 3897-4604 | 708 | - | Not tested | - |
| 5 | tnpB | AAD44734.1 | 4360-4752 | 393 | - | Not tested | - |
| 6 | shiC | AAD44735.1 | 5239-5757 | 519 | + | Virulence | - |
| 7 | tnpC | AAD44736.1 | 5838-6458 | 621 | - | Not tested | - |
| 8 | tnpD | AAD44737.1 | 6368-6724 | 357 | - | Not tested | - |
| 9 | tnpE | AAD44738.1 | 6721-7047 | 327 | - | Not tested | - |
| 10 | tnpF | AAD44739.1 | 7817-8608 | 792 | - | Not tested | - |
| 11 | tnpG | AAD44740.1 | 8680-9045 | 366 | - | Not tested | - |
| 12 | shiD | AAD44741.1 | 10597-10995 | 399 | + | Virulence | - |
| 13 | tnpH | AAD44742.1 | 11517-12020 | 504 | - | Not tested | - |
| 14 | shiE | AAD44743.1 | 12113-12643 | 531 | + | Virulence | - |
| 15 | shiF | AAD44744.1 | 13016-14209 | 1194 | - | Virulence | - |
| 16 | shiG | AAD44745.1 | 13857-14285 | 429 | + | Virulence | - |
| 17 | iucA | AAD44746.1 | 14288-16069 | 1782 | + | Virulence | - |
| 18 | iucB | AAD44747.1 | 16070-17017 | 948 | + | Virulence | - |
| 19 | iucC | AAD44748.1 | 17017-18759 | 1743 | + | Virulence | - |
| 20 | iucD | AAD44749.1 | 18756-20093 | 1338 | + | Virulence | - |
| 21 | iutA | AAD44750.1 | 20096-22294 | 2199 | + | Virulence | - |
| 22 | tnpI | AAD44751.1 | 22551-23369 | 819 | - | Not tested | - |
| 23 | tnpJ | AAD44752.1 | 23405-23707 | 303 | - | Not tested | - |
|
NC_009792 (Citrobacter koseri ATCC BAA-895): 1.0 Mb NC_018405 (Enterobacter cloacae ENHKU01): 3.0 Mb NC_021046 (Enterobacter cloacae NCTC 9394): 4.2 Mb NC_013353 (Escherichia coli 12009): 3.6 Mb NC_018650 (Escherichia coli 2009EL-2050): 4.7 Mb NC_018661 (Escherichia coli 2009EL-2071): 4.8 Mb NC_018658 (Escherichia coli 2011C-3493): 4.7 Mb NC_011748 (Escherichia coli 55989): 4.7 Mb NC_017631 (Escherichia coli ABU 83972): 3.3 Mb NC_008563 (Escherichia coli APEC O1): 4.8 Mb NC_017646 (Escherichia coli CE10): 3.5, 4.3 Mb NC_004431 (Escherichia coli CFT073): 3.4 Mb NC_017652 (Escherichia coli clone D i14): 3.3, 3.3 Mb NC_017651 (Escherichia coli clone D i2): 3.3, 3.3 Mb NC_009801 (Escherichia coli E24377A): 4.8 Mb NC_011745 (Escherichia coli ED1a): 1.3, 4.9 Mb NC_017633 (Escherichia coli ETEC H10407): 4.2 Mb NC_011750 (Escherichia coli IAI39): 3.5 Mb NC_017644 (Escherichia coli NA114): 4.8 Mb NC_011742 (Escherichia coli S88): 4.7 Mb NC_010498 (Escherichia coli SMS-3-5): 3.3 Mb NC_011751 (Escherichia coli UMN026): 3.4 Mb NC_021232 (Klebsiella pneumoniae SB3432): 5.0 Mb NC_017531 (Pantoea ananatis AJ13355): 4.2 Mb NC_013956 (Pantoea ananatis LMG 20103): 0.4 Mb NC_016816 (Pantoea ananatis LMG 5342): 4.3 Mb NC_017554 (Pantoea ananatis PA13): 4.3 Mb NC_017845 (Pectobacterium sp. SCC3193): 0.9 Mb NC_013421 (Pectobacterium wasabiae WPP163): 1.0 Mb NC_010067 (Salmonella enterica RSK2980): 2.1 Mb NC_016860 (Salmonella enterica T000240): 4.0 Mb NC_021741 (Serratia liquefaciens ATCC 27592): 0.8 Mb NC_020064 (Serratia marcescens FGI94): 0.9 Mb NC_021591 (Serratia odorifera 4Rx13): 0.8 Mb NC_015567 (Serratia plymuthica AS9): 0.9 Mb NC_021659 (Serratia plymuthica S13): 0.9 Mb NC_009832 (Serratia proteamaculans 568): 1.0 Mb NC_015566 (Serratia sp. AS12): 0.9 Mb NC_017573 (Serratia sp. AS13): 0.9 Mb NC_010658 (Shigella boydii CDC 3083-94): 0.8, 1.4, 4.3 Mb NC_007613 (Shigella boydii Sb227): 1.3, 4.2, 4.4 Mb NC_007606 (Shigella dysenteriae Sd197): 0.5, 0.9, 1.3, 1.8, 4.3 Mb NC_017328 (Shigella flexneri 2002017): 1.5, 3.8 Mb NC_004741 (Shigella flexneri 2457T): 1.9, 2.0, 3.9 Mb NC_004337 (Shigella flexneri 301): 0.3, 1.4, 3.1, 3.8 Mb NC_008258 (Shigella flexneri 8401): 3.9 Mb NC_016822 (Shigella sonnei 53G): 1.4, 2.0, 4.0, 4.7 Mb NC_007384 (Shigella sonnei Ss046): 1.3, 1.4, 2.8, 3.8 Mb NC_005810 (Yersinia pestis 91001): 3.9 Mb NC_010159 (Yersinia pestis Angola): 0.2 Mb NC_008150 (Yersinia pestis Antiqua): 0.3 Mb NC_003143 (Yersinia pestis CO92): 1.1 Mb NC_017160 (Yersinia pestis D182038): 0.9 Mb NC_017265 (Yersinia pestis Harbin 35): 0.8 Mb NC_004088 (Yersinia pestis KIM): 3.7 Mb NC_008149 (Yersinia pestis Nepal516): 3.6 Mb NC_009381 (Yersinia pestis Pestoides F): 0.6 Mb NC_014029 (Yersinia pestis Z176003): 1.0 Mb NC_009708 (Yersinia pseudotuberculosis IP 31758): 0.9 Mb NC_006155 (Yersinia pseudotuberculosis IP 32953): 3.8 Mb NC_010634 (Yersinia pseudotuberculosis PB1/+): 3.8 Mb NC_010465 (Yersinia pseudotuberculosis YPIII): 0.9 Mb |
