Pathogenicity Island: Hrp PAI


• General information

Name : Hrp PAI
Host strain : Pseudomonas syringae Race 4
Function : Type III secretion system, Hop, Avr, hypersensitive response, mosaic structure (exchangeable effector locus, hrp/hrc gene cluster,conserved effector locus)
Insertion site : tRNA-leu


• GenBank accessions: 4 records

1) AF069650 (2000 bp)

    Definition : Pseudomonas syringae transcriptional regulator (hrpR) and transcriptional regulator (hrpS) genes, complete cds.

    Publication :
    - Deng,W.L., Preston,G., Collmer,A., Chang,C.J. and Huang,H.C., "Characterization of the hrpC and hrpRS operons of Pseudomonas syringae pathovars syringae, tomato, and glycinea and analysis of the ability of hrpF, hrpG, hrcC, hrpT, and hrpV mutants to elicit the hypersensitive response and disease in plants", J. Bacteriol. 180 (17), 4523-4531 (1998) PUBMED 9721291.

    - Preston,G.M. and Collmer,A., "Direct Submission", Submitted (03-JUN-1998) Plant Sciences, University of Oxford, South Parks Road, Oxford OX1 3RB, UK.


      





2) AF069651 (3000 bp)

    Definition : Pseudomonas syringae putative hrp type III secretion pathway protein (hrcJ), HrpD (hrpD), and putative hrp type III secretion pathway protein (hrpE) genes, complete cds; and hrpC operon, complete sequence.

    Publication :
    - Deng,W.L., Preston,G., Collmer,A., Chang,C.J. and Huang,H.C., "Characterization of the hrpC and hrpRS operons of Pseudomonas syringae pathovars syringae, tomato, and glycinea and analysis of the ability of hrpF, hrpG, hrcC, hrpT, and hrpV mutants to elicit the hypersensitive response and disease in plants", J. Bacteriol. 180 (17), 4523-4531 (1998) PUBMED 9721291.

    - Preston,G.M. and Collmer,A., "Direct Submission", Submitted (03-JUN-1998) Plant Sciences, University of Oxford, South Parks Road, Oxford OX1 3RB, UK.


      





3) AF069652 (2500 bp)

    Definition : Pseudomonas syringae putative outer membrane protein (hrpT), negative regulator of hrp expression (hrpV), and hrp type III pathway protein (hrcU) genes, complete cds.

    Publication :
    - Deng,W.L., Preston,G., Collmer,A., Chang,C.J. and Huang,H.C., "Characterization of the hrpC and hrpRS operons of Pseudomonas syringae pathovars syringae, tomato, and glycinea and analysis of the ability of hrpF, hrpG, hrcC, hrpT, and hrpV mutants to elicit the hypersensitive response and disease in plants", J. Bacteriol. 180 (17), 4523-4531 (1998) PUBMED 9721291.

    - Preston,G.M. and Collmer,A., "Direct Submission", Submitted (03-JUN-1998) Plant Sciences, University of Oxford, South Parks Road, Oxford OX1 3RB, UK.


      





4) L41862 (2018 bp)

    Definition : Pseudomonas syringae (strain Race 4) hrpAZB genes, complete cds.

    Publication :
    - Preston,G., Huang,H.C., He,S.Y. and Collmer,A., "The HrpZ proteins of Pseudomonas syringae pvs. syringae, glycinea, and tomato are encoded by an operon containing Yersinia ysc homologs and elicit the hypersensitive response in tomato but not soybean", Mol. Plant Microbe Interact. 8 (5), 717-732 (1995) PUBMED 7579616.


      





• PAI-like regions homologous to this PAI (genomes and locations)

NC_009439 (Pseudomonas mendocina ymp): 0.0 Mb
NC_005773 (Pseudomonas syringae 1448A): 1.5 Mb
NC_007005 (Pseudomonas syringae B728a): 1.3 Mb
NC_004578 (Pseudomonas syringae DC3000): 1.5 Mb