Publication : - Furuta,Y., Kawai,M., Yahara,K., Takahashi,N., Handa,N., Tsuru,T., Oshima,K., Yoshida,M., Azuma,T., Hattori,M., Uchiyama,I. and Kobayashi,I., "Birth and death of genes linked to chromosomal inversion", Proc. Natl. Acad. Sci. U.S.A. 108 (4), 1501-1506 (2011) PUBMED 21212362 REMARK DOI:10.1073/pnas.1012579108. - Kawai,M., Furuta,Y., Yahara,K., Tsuru,T., Oshima,K., Handa,N., Takahashi,N., Yoshida,M., Azuma,T., Hattori,M., Uchiyama,I. and Kobayashi,I., "Evolution in an oncogenic bacterial species with extreme genome plasticity: Helicobacter pylori East Asian genomes", BMC Microbiol. 11, 104 (2011) PUBMED 21575176 REMARK Publication Status: Online-Only. - Kawai,M., Furuta,Y., Yahara,K., Tsuru,T., Oshima,K., Handa,N., Takahashi,N., Yoshida,M., Azuma,T., Hattori,M., Uchiyama,I. and Kobayashi,I., "Direct Submission", Submitted (05-APR-2012) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA. - Kawai,M., Furuta,Y., Yahara,K., Tsuru,T., Takahashi,N., Handa,N., Oshima,K., Hattori,M., Yoshida,M., Azuma,T., Uchiyama,I. and Kobayashi,I., "Direct Submission", Submitted (22-JUL-2010) Contact:Masahira Hattori The University of Tokyo, Center for Omics and Bioinformatics; Kashiwanoha 5-1-5, Kashiwa, Chiba 277-8561, Japan. |
| No | Name | GenBank Accn | Position | Size(bp) | Strand | Virulence/Resistance | Description |
| 1 | cag1 | YP_005777264.1 | 1-348 | 348 | + | Virulence | - |
| 2 | HPF57_0551 | YP_005777265.1 | 358-561 | 204 | + | Virulence | - |
| 3 | cag3 | YP_005777266.1 | 575-2020 | 1446 | + | Virulence | - |
| 4 | cag4 | YP_005777267.1 | 2030-2539 | 510 | + | Virulence | - |
| 5 | cag5 | YP_005777268.1 | 2847-5093 | 2247 | - | Virulence | - |
| 6 | virB11-2 | YP_005777269.1 | 5102-6094 | 993 | - | Virulence | - |
| 7 | cagZ | YP_005777270.1 | 6099-6698 | 600 | - | Virulence | - |
| 8 | cagY | YP_005777271.1 | 6835-12228 | 5394 | - | Virulence | - |
| 9 | cagX | YP_005777272.1 | 12243-13811 | 1569 | - | Virulence | - |
| 10 | cagW | YP_005777273.1 | 13864-15471 | 1608 | - | Virulence | - |
| 11 | cagV | YP_005777274.1 | 15476-16234 | 759 | - | Virulence | - |
| 12 | cagU | YP_005777275.1 | 16504-17151 | 648 | + | Virulence | - |
| 13 | cagT | YP_005777276.1 | 17167-18009 | 843 | + | Virulence | - |
| 14 | cagS | YP_005777277.1 | 18211-18810 | 600 | - | Virulence | - |
| 15 | cagM | YP_005777278.1 | 21644-22774 | 1131 | + | Virulence | - |
| 16 | cagN | YP_005777279.1 | 22789-23709 | 921 | + | Virulence | - |
| 17 | cagL | YP_005777280.1 | 23792-24505 | 714 | - | Virulence | - |
| 18 | cagI | YP_005777281.1 | 24502-25647 | 1146 | - | Virulence | - |
| 19 | cagH | YP_005777282.1 | 25658-26770 | 1113 | - | Virulence | - |
| 20 | cagG | YP_005777283.1 | 26772-27203 | 432 | - | Virulence | - |
| 21 | cagF | YP_005777284.1 | 27258-28064 | 807 | - | Virulence | - |
| 22 | cagE | YP_005777285.1 | 28066-31017 | 2952 | - | Virulence | - |
| 23 | cagD | YP_005777286.1 | 31026-31649 | 624 | - | Virulence | - |
| 24 | cagC | YP_005777287.1 | 31651-31998 | 348 | - | Virulence | - |
| 25 | cagA | YP_005777288.1 | 32656-36168 | 3513 | + | Virulence | - |
| 26 | tnpB | YP_005777289.1 | 36240-36524 | 285 | - | Not tested | - |
|
NC_017374 (Helicobacter pylori 2017): 0.5 Mb NC_017381 (Helicobacter pylori 2018): 0.5 Mb NC_000915 (Helicobacter pylori 26695): 0.5 Mb NC_018939 (Helicobacter pylori 26695): 0.5 Mb NC_017360 (Helicobacter pylori 35A): 1.0 Mb NC_017382 (Helicobacter pylori 51): 0.8 Mb NC_017354 (Helicobacter pylori 52): 0.8 Mb NC_017375 (Helicobacter pylori 83): 0.9 Mb NC_017357 (Helicobacter pylori 908): 0.5 Mb NC_014256 (Helicobacter pylori B8): 0.7 Mb NC_017358 (Helicobacter pylori Cuz20): 0.6 Mb NC_017063 (Helicobacter pylori ELS37): 0.8 Mb NC_017368 (Helicobacter pylori F16): 0.8 Mb NC_017365 (Helicobacter pylori F30): 0.8 Mb NC_017366 (Helicobacter pylori F32): 0.5 Mb NC_017367 (Helicobacter pylori F57): 0.6 Mb NC_011333 (Helicobacter pylori G27): 0.5 Mb NC_017371 (Helicobacter pylori Gambia94/24): 0.5 Mb NC_008086 (Helicobacter pylori HPAG1): 0.5 Mb NC_017733 (Helicobacter pylori HUP-B14): 0.8 Mb NC_017372 (Helicobacter pylori India7): 0.8 Mb NC_000921 (Helicobacter pylori J99): 0.5 Mb NC_017362 (Helicobacter pylori Lithuania75): 0.5 Mb NC_020508 (Helicobacter pylori OK113): 0.6 Mb NC_020509 (Helicobacter pylori OK310): 0.8 Mb NC_011498 (Helicobacter pylori P12): 0.5 Mb NC_017742 (Helicobacter pylori PeCan18): 0.5 Mb NC_014555 (Helicobacter pylori PeCan4): 0.5 Mb NC_017378 (Helicobacter pylori Puno120): 0.5 Mb NC_017379 (Helicobacter pylori Puno135): 0.5 Mb NC_018937 (Helicobacter pylori Rif1): 0.5 Mb NC_018938 (Helicobacter pylori Rif2): 0.5 Mb NC_017376 (Helicobacter pylori Santal49): 0.5 Mb NC_017359 (Helicobacter pylori Sat464): 0.8 Mb NC_017741 (Helicobacter pylori Shi112): 0.9 Mb NC_017740 (Helicobacter pylori Shi169): 0.5 Mb NC_017739 (Helicobacter pylori Shi417): 0.5 Mb NC_010698 (Helicobacter pylori Shi470): 0.8 Mb NC_014560 (Helicobacter pylori SJM180): 0.5 Mb NC_021215 (Helicobacter pylori UM032): 0.9 Mb NC_021217 (Helicobacter pylori UM037): 0.8 Mb NC_021218 (Helicobacter pylori UM066): 1.0 Mb NC_021882 (Helicobacter pylori UM298): 1.5 Mb NC_021216 (Helicobacter pylori UM299): 0.4 Mb NC_017355 (Helicobacter pylori v225d): 0.5, 0.5 Mb NC_017926 (Helicobacter pylori XZ274): 0.9 Mb |
