Pathogenicity Island: cag PAI


• General information

Name : cag PAI
Host strain : Helicobacter pylori F32
Function : Type IV secretion system
Insertion site : -


• GenBank accessions: 1 records

1) NC_017366_P1 (36253 bp)

    Definition : cag pathogenicity island (cag PAI), (534613..570865) bp from NC_017366, Helicobacter pylori F32, complete genome.

    Publication :
    - Furuta,Y., Kawai,M., Yahara,K., Takahashi,N., Handa,N., Tsuru,T., Oshima,K., Yoshida,M., Azuma,T., Hattori,M., Uchiyama,I. and Kobayashi,I., "Birth and death of genes linked to chromosomal inversion", Proc. Natl. Acad. Sci. U.S.A. 108 (4), 1501-1506 (2011) PUBMED 21212362 REMARK DOI:10.1073/pnas.1012579108.

    - Kawai,M., Furuta,Y., Yahara,K., Tsuru,T., Oshima,K., Handa,N., Takahashi,N., Yoshida,M., Azuma,T., Hattori,M., Uchiyama,I. and Kobayashi,I., "Evolution in an oncogenic bacterial species with extreme genome plasticity: Helicobacter pylori East Asian genomes", BMC Microbiol. 11, 104 (2011) PUBMED 21575176 REMARK Publication Status: Online-Only.

    - Kawai,M., Furuta,Y., Yahara,K., Tsuru,T., Oshima,K., Handa,N., Takahashi,N., Yoshida,M., Azuma,T., Hattori,M., Uchiyama,I. and Kobayashi,I., "Direct Submission", Submitted (05-APR-2012) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.

    - Kawai,M., Furuta,Y., Yahara,K., Tsuru,T., Takahashi,N., Handa,N., Oshima,K., Hattori,M., Yoshida,M., Azuma,T., Uchiyama,I. and Kobayashi,I., "Direct Submission", Submitted (22-JUL-2010) Contact:Masahira Hattori The University of Tokyo, Center for Omics and Bioinformatics; Kashiwanoha 5-1-5, Kashiwa, Chiba 277-8561, Japan.


      






• PAI-like regions homologous to this PAI (genomes and locations)

NC_017374 (Helicobacter pylori 2017): 0.5 Mb
NC_017381 (Helicobacter pylori 2018): 0.5 Mb
NC_000915 (Helicobacter pylori 26695): 0.5 Mb
NC_018939 (Helicobacter pylori 26695): 0.5 Mb
NC_017360 (Helicobacter pylori 35A): 1.0 Mb
NC_017382 (Helicobacter pylori 51): 0.8 Mb
NC_017354 (Helicobacter pylori 52): 0.8 Mb
NC_017375 (Helicobacter pylori 83): 0.9 Mb
NC_017357 (Helicobacter pylori 908): 0.5 Mb
NC_014256 (Helicobacter pylori B8): 0.7 Mb
NC_017358 (Helicobacter pylori Cuz20): 0.6 Mb
NC_017063 (Helicobacter pylori ELS37): 0.8 Mb
NC_017368 (Helicobacter pylori F16): 0.8 Mb
NC_017365 (Helicobacter pylori F30): 0.8 Mb
NC_017366 (Helicobacter pylori F32): 0.5 Mb
NC_017367 (Helicobacter pylori F57): 0.6 Mb
NC_011333 (Helicobacter pylori G27): 0.5 Mb
NC_017371 (Helicobacter pylori Gambia94/24): 0.5 Mb
NC_008086 (Helicobacter pylori HPAG1): 0.5 Mb
NC_017733 (Helicobacter pylori HUP-B14): 0.8 Mb
NC_017372 (Helicobacter pylori India7): 0.8 Mb
NC_000921 (Helicobacter pylori J99): 0.5 Mb
NC_017362 (Helicobacter pylori Lithuania75): 0.5 Mb
NC_020508 (Helicobacter pylori OK113): 0.6 Mb
NC_020509 (Helicobacter pylori OK310): 0.8 Mb
NC_011498 (Helicobacter pylori P12): 0.5 Mb
NC_017742 (Helicobacter pylori PeCan18): 0.5 Mb
NC_014555 (Helicobacter pylori PeCan4): 0.5 Mb
NC_017378 (Helicobacter pylori Puno120): 0.5 Mb
NC_017379 (Helicobacter pylori Puno135): 0.5 Mb
NC_018937 (Helicobacter pylori Rif1): 0.5 Mb
NC_018938 (Helicobacter pylori Rif2): 0.5 Mb
NC_017376 (Helicobacter pylori Santal49): 0.5 Mb
NC_017359 (Helicobacter pylori Sat464): 0.8 Mb
NC_017741 (Helicobacter pylori Shi112): 0.9 Mb
NC_017740 (Helicobacter pylori Shi169): 0.5 Mb
NC_017739 (Helicobacter pylori Shi417): 0.5 Mb
NC_010698 (Helicobacter pylori Shi470): 0.8 Mb
NC_014560 (Helicobacter pylori SJM180): 0.5 Mb
NC_021215 (Helicobacter pylori UM032): 0.9 Mb
NC_021217 (Helicobacter pylori UM037): 0.8 Mb
NC_021218 (Helicobacter pylori UM066): 1.0 Mb
NC_021882 (Helicobacter pylori UM298): 1.5 Mb
NC_021216 (Helicobacter pylori UM299): 0.4 Mb
NC_017355 (Helicobacter pylori v225d): 0.5, 0.5 Mb
NC_017926 (Helicobacter pylori XZ274): 0.9 Mb