Publication : - Fischer,W., Windhager,L., Rohrer,S., Zeiller,M., Karnholz,A., Hoffmann,R., Zimmer,R. and Haas,R., "Strain-specific genes of Helicobacter pylori: genome evolution driven by a novel type IV secretion system and genomic island transfer", Nucleic Acids Res. 38 (18), 6089-6101 (2010) PUBMED 20478826. - Fischer,W., Windhager,L., Rohrer,S., Zeiller,M., Karnholz,A., Hoffmann,R., Zimmer,R. and Haas,R., "Direct Submission", Submitted (30-OCT-2008) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA. - Fischer,W., Windhager,L., Karnholz,A., Zeiller,M., Zimmer,R. and Haas,R., "Direct Submission", Submitted (22-OCT-2008) Max von Pettenkofer-Institut fuer Hygiene und Medizinische Mikrobiologie, Ludwig-Maximilians-Universitaet Muenchen, Pettenkoferstr. 9a, Munich 80336, Germany. |
| No | Name | GenBank Accn | Position | Size(bp) | Strand | Virulence/Resistance | Description |
| 1 | HPP12_0437 | YP_002301073.1 | 1-1074 | 1074 | + | Not tested | - |
| 2 | HPP12_0438 | YP_002301074.1 | 1156-1839 | 684 | - | Not tested | - |
| 3 | virb6 | YP_002301075.1 | 1912-3210 | 1299 | - | Virulence | - |
| 4 | HPP12_0440 | YP_002301076.1 | 3176-3454 | 279 | - | Not tested | - |
| 5 | HPP12_0441 | YP_002301077.1 | 3506-4906 | 1401 | - | Not tested | - |
| 6 | HPP12_0442 | YP_002301078.1 | 4910-5155 | 246 | - | Not tested | - |
| 7 | HPP12_0443 | YP_002301079.1 | 5369-6850 | 1482 | - | Not tested | - |
| 8 | HPP12_0444 | YP_002301080.1 | 6983-8047 | 1065 | - | Not tested | - |
| 9 | HPP12_0445 | YP_002301081.1 | 7890-8381 | 492 | - | Not tested | - |
| 10 | HPP12_0446 | YP_002301082.1 | 8388-9410 | 1023 | - | Not tested | - |
| 11 | HPP12_0447 | YP_002301083.1 | 9674-18100 | 8427 | + | Not tested | - |
| 12 | parA | YP_002301084.1 | 18363-19019 | 657 | + | Not tested | - |
| 13 | HPP12_0449 | YP_002301085.1 | 19101-19385 | 285 | + | Not tested | - |
| 14 | HPP12_0450 | YP_002301086.1 | 19417-20595 | 1179 | + | Not tested | - |
| 15 | virD2-1 | YP_002301087.1 | 20620-22533 | 1914 | - | Virulence | - |
| 16 | HPP12_0452 | YP_002301088.1 | 22831-23145 | 315 | + | Not tested | - |
| 17 | HPP12_0453 | YP_002301089.1 | 23138-23419 | 282 | + | Not tested | - |
| 18 | virD4-1 | YP_002301090.1 | 23683-25410 | 1728 | - | Virulence | - |
| 19 | HPP12_0455 | YP_002301091.1 | 25457-25969 | 513 | - | Not tested | - |
| 20 | HPP12_0456 | YP_002301092.1 | 25970-26260 | 291 | - | Not tested | - |
| 21 | HPP12_0457 | YP_002301093.1 | 26257-26712 | 456 | - | Not tested | - |
| 22 | virB11-1 | YP_002301094.1 | 26709-27650 | 942 | - | Virulence | - |
| 23 | HPP12_0459 | YP_002301095.1 | 27650-27949 | 300 | - | Not tested | - |
| 24 | HPP12_0460 | YP_002301096.1 | 27946-28209 | 264 | - | Not tested | - |
| 25 | HPP12_0461 | YP_002301097.1 | 28202-28495 | 294 | - | Not tested | - |
| 26 | virB10-1 | YP_002301098.1 | 28565-29830 | 1266 | - | Virulence | - |
| 27 | virB9-1 | YP_002301099.1 | 29830-31362 | 1533 | - | Virulence | - |
| 28 | virB8-1 | YP_002301100.1 | 31362-32531 | 1170 | - | Virulence | - |
| 29 | virB7-1 | YP_002301101.1 | 32535-32651 | 117 | - | Virulence | - |
| 30 | virB3-1 | YP_002301102.1 | 37100-37366 | 267 | - | Virulence | - |
| 31 | virB2-1 | YP_002301103.1 | 37367-37669 | 303 | - | Virulence | - |
| 32 | HPP12_0470 | YP_002301104.1 | 37666-37950 | 285 | - | Not tested | - |
| 33 | HPP12_0471 | YP_002301105.1 | 38011-39189 | 1179 | - | Not tested | - |
| 34 | HPP12_0472 | YP_002301106.1 | 39196-39489 | 294 | - | Not tested | - |
| 35 | HPP12_0473 | YP_002301107.1 | 39509-40288 | 780 | - | Not tested | - |
|
NC_000915 (Helicobacter pylori 26695): 0.5 Mb NC_018939 (Helicobacter pylori 26695): 0.5 Mb NC_017382 (Helicobacter pylori 51): 1.0 Mb NC_019560 (Helicobacter pylori Aklavik117): 0.5, 1.4 Mb NC_014256 (Helicobacter pylori B8): 0.5 Mb NC_017358 (Helicobacter pylori Cuz20): 0.2 Mb NC_017367 (Helicobacter pylori F57): 0.3 Mb NC_011333 (Helicobacter pylori G27): 1.0 Mb NC_017371 (Helicobacter pylori Gambia94/24): 1.0 Mb NC_017372 (Helicobacter pylori India7): 0.8 Mb NC_020508 (Helicobacter pylori OK113): 0.5 Mb NC_011498 (Helicobacter pylori P12): 0.5 Mb NC_014555 (Helicobacter pylori PeCan4): 1.5 Mb NC_017379 (Helicobacter pylori Puno135): 1.0 Mb NC_018937 (Helicobacter pylori Rif1): 0.5 Mb NC_018938 (Helicobacter pylori Rif2): 0.5 Mb NC_017376 (Helicobacter pylori Santal49): 0.1 Mb NC_017741 (Helicobacter pylori Shi112): 0.2, 1.4 Mb NC_017740 (Helicobacter pylori Shi169): 0.2 Mb NC_017739 (Helicobacter pylori Shi417): 1.2, 1.6 Mb NC_010698 (Helicobacter pylori Shi470): 0.9 Mb NC_014560 (Helicobacter pylori SJM180): 1.4 Mb NC_022130 (Helicobacter pylori SouthAfrica20): 1.0 Mb NC_017361 (Helicobacter pylori SouthAfrica7): 0.9, 1.5 Mb NC_021218 (Helicobacter pylori UM066): 0.3 Mb NC_017926 (Helicobacter pylori XZ274): 0.6 Mb |
