Publication : - Lalioui,L., Jouve,M., Gounon,P. and Le Bouguenec,C., "Molecular cloning and characterization of the afa-7 and afa-8 gene clusters encoding afimbrial adhesins in Escherichia coli strains associated with diarrhea or septicemia in calves", Infect. Immun. 67 (10), 5048-5059 (1999) PUBMED 10496877. - Lalioui,L. and Le Bouguenec,C., "afa-8 Gene cluster is carried by a pathogenicity island inserted into the tRNA(Phe) of human and bovine pathogenic Escherichia coli isolates", Infect. Immun. 69 (2), 937-948 (2001) PUBMED 11159989. - Lalioui,L. and Le Bouguenec,C., "Direct Submission", Submitted (19-JUN-1998) Path. Bact. des Muq., Institut Pasteur, 28 rue du Dr. Roux, Paris Cedex 15 75724, France. - Lalioui,L. and Le Bouguenec,C., "Direct Submission", Submitted (01-JUL-1998) Path. Bact. des Muq., Institut Pasteur, 28 rue du Dr Roux, Paris cedex 15 75724, France. - Lalioui,L. and Le Bouguenec,C., "Direct Submission", Submitted (03-AUG-1999) Path. Bact. des Muq., Institut Pasteur, 28 rue du Dr. Roux, Paris Cedex 15 75724, France REMARK Sequence update by submitter. - Lalioui,L. and Le Bouguenec,C.C., "Direct Submission", Submitted (02-AUG-2000) Unite de Pathogenie Bacterienne des Muqueuses, Institut Pasteur, 28 rue du Dr Roux, Paris Cedex 15 75724, France REMARK Sequence update by submitter. |
| No | Name | GenBank Accn | Position | Size(bp) | Strand | Virulence/Resistance | Description |
| 1 | afaF | AAK16195.1 | 37-225 | 189 | - | Virulence | - |
| 2 | afaA | AAK16196.1 | 825-1208 | 384 | + | Virulence | - |
| 3 | afaB | AAK16197.1 | 1286-2053 | 768 | + | Virulence | - |
| 4 | afaC | AAD44022.2 | 2222-4807 | 2586 | + | Virulence | - |
| 5 | afaD | AAD44023.1 | 4823-5242 | 420 | + | Virulence | - |
| 6 | afaE | AAD44024.1 | 5777-6289 | 513 | + | Virulence | - |
| 7 | int | AAK16198.1 | 6584-7849 | 1266 | - | Not tested | - |
| 8 | yeeT | AAK16199.1 | 11495-11716 | 222 | - | Not tested | - |
Publication : - Lalioui,L. and Le Bouguenec,C., "afa-8 Gene cluster is carried by a pathogenicity island inserted into the tRNA(Phe) of human and bovine pathogenic Escherichia coli isolates", Infect. Immun. 69 (2), 937-948 (2001) PUBMED 11159989. - Lalioui,L. and Le Bouguenec,C.C., "Direct Submission", Submitted (13-JUL-2000) Unite de Pathogenie Bacterienne des Muqueuses, Institut Pasteur, 28 rue du Dr Roux, Paris cedex 15 75724, France. |
| No | Name | GenBank Accn | Position | Size(bp) | Strand | Virulence/Resistance | Description |
| 1 | ORF5 | AAK27332.1 | 219-365 | 147 | + | Not tested | - |
| 2 | ORF6 | AAK27333.1 | 402-737 | 336 | + | Not tested | - |
| 3 | ORF7 | AAK27334.1 | 1159-1443 | 285 | + | Not tested | - |
| 4 | ORF8 | AAK27335.1 | 1659-2915 | 1257 | - | Not tested | - |
| 5 | ORF9 | AAK27336.1 | 2928-3215 | 288 | - | Not tested | - |
| 6 | ORF10 | AAK27337.1 | 3231-3674 | 444 | - | Not tested | - |
| 7 | ORF11 | AAK27338.1 | 3946-4319 | 374 | + | Not tested | - |
Publication : - Lalioui,L. and Le Bouguenec,C., "afa-8 Gene cluster is carried by a pathogenicity island inserted into the tRNA(Phe) of human and bovine pathogenic Escherichia coli isolates", Infect. Immun. 69 (2), 937-948 (2001) PUBMED 11159989. - Lalioui,L. and Le Bouguenec,C.C., "Direct Submission", Submitted (13-JUL-2000) Unite de Pathogenie Bacterienne des Muqueuses, Institut Pasteur, 28 rue du Dr Roux, Paris cedex 15 75724, France. |
| No | Name | GenBank Accn | Position | Size(bp) | Strand | Virulence/Resistance | Description |
| 1 | ORF3 | AAK27330.1 | 1-172 | 172 | - | Not tested | - |
| 2 | ORF4 | AAK27331.1 | 450-1394 | 945 | + | Not tested | - |
|
NC_017626 (Escherichia coli 042): 5.1 Mb NC_018650 (Escherichia coli 2009EL-2050): 4.5 Mb NC_018661 (Escherichia coli 2009EL-2071): 4.6 Mb NC_018658 (Escherichia coli 2011C-3493): 4.6 Mb NC_011748 (Escherichia coli 55989): 5.0 Mb NC_017631 (Escherichia coli ABU 83972): 0.3 Mb NC_004431 (Escherichia coli CFT073): 0.3 Mb NC_017652 (Escherichia coli clone D i14): 0.3 Mb NC_017651 (Escherichia coli clone D i2): 0.3 Mb NC_013654 (Escherichia coli SE15): 4.6 Mb |
