Pathogenicity Island: LEE


• General information

Name : LEE
Host strain : Escherichia coli O157:H7 Sakai
Function : Type III secretion system, translocation of Tir, adherence of EHEC to epithelial cells, Eae, Part of SpLE4
Insertion site : tRNA-selC


• GenBank accessions: 1 records

1) NC_002695_P2 (42794 bp)

    Definition : Locus of enterocyte effacement (LEE), (4580769..4623562) bp from NC_002695, Escherichia coli O157:H7 str. Sakai chromosome, complete genome.

    Publication :
    - Bergholz,T.M., Wick,L.M., Qi,W., Riordan,J.T., Ouellette,L.M. and Whittam,T.S., "Global transcriptional response of Escherichia coli O157:H7 to growth transitions in glucose minimal medium", BMC Microbiol. 7, 97 (2007) PUBMED 17967175 REMARK Publication Status: Online-Only.

    - Hayashi,T., Makino,K., Ohnishi,M., Kurokawa,K., Ishii,K., Yokoyama,K., Han,C.G., Ohtsubo,E., Nakayama,K., Murata,T., Tanaka,M., Tobe,T., Iida,T., Takami,H., Honda,T., Sasakawa,C., Ogasawara,N., Yasunaga,T., Kuhara,S., Shiba,T., Hattori,M. and Shinagawa,H., "Complete genome sequence of enterohemorrhagic Escherichia coli O157:H7 and genomic comparison with a laboratory strain K-12", DNA Res. 8 (1), 11-22 (2001) PUBMED 11258796 REMARK Erratum:[DNA Res 2001 Apr 27;8(2):96].

    - Yokoyama,K., Makino,K., Kubota,Y., Watanabe,M., Kimura,S., Yutsudo,C.H., Kurokawa,K., Ishii,K., Hattori,M., Tatsuno,I., Abe,H., Yoh,M., Iida,T., Ohnishi,M., Hayashi,T., Yasunaga,T., Honda,T., Sasakawa,C. and Shinagawa,H., "Complete nucleotide sequence of the prophage VT1-Sakai carrying the Shiga toxin 1 genes of the enterohemorrhagic Escherichia coli O157:H7 strain derived from the Sakai outbreak", Gene 258 (1-2), 127-139 (2000) PUBMED 11111050.

    - Ohnishi,M., Murata,T., Nakayama,K., Kuhara,S., Hattori,M., Kurokawa,K., Yasunaga,T., Yokoyama,K., Makino,K., Shinagawa,H. and Hayashi,T., "Comparative analysis of the whole set of rRNA operons between an enterohemorrhagic Escherichia coli O157:H7 Sakai strain and an Escherichia coli K-12 strain MG1655", Syst. Appl. Microbiol. 23 (3), 315-324 (2000) PUBMED 11108008.

    - Makino,K., Yokoyama,K., Kubota,Y., Yutsudo,C.H., Kimura,S., Kurokawa,K., Ishii,K., Hattori,M., Tatsuno,I., Abe,H., Iida,T., Yamamoto,K., Onishi,M., Hayashi,T., Yasunaga,T., Honda,T., Sasakawa,C. and Shinagawa,H., "Complete nucleotide sequence of the prophage VT2-Sakai carrying the verotoxin 2 genes of the enterohemorrhagic Escherichia coli O157:H7 derived from the Sakai outbreak", Genes Genet. Syst. 74 (5), 227-239 (1999) PUBMED 10734605.

    - Makino,K., Yokoyama,K., Kubota,Y., Yutsudo,C.H., Kimura,S., Kurokawa,K., Ishii,K., Hattori,M., Tatsuno,I., Abe,H., Iida,T., Yamamoto,K., Onishi,M., Hayashi,T., Yasunaga,T., Honda,T., Sasakawa,C. and Shinagawa,H., "Direct Submission", Submitted (10-SEP-2004) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.

    - Makino,K., Yokoyama,K., Kubota,Y., Yutsudo,C.H., Kimura,S., Kurokawa,K., Ishii,K., Hattori,M., Tatsuno,I., Abe,H., Iida,T., Yamamoto,K., Onishi,M., Hayashi,T., Yasunaga,T., Honda,T., Sasakawa,C. and Shinagawa,H., "Direct Submission", Submitted (25-JUN-2001) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.