Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
T3SS component |
NC_013361 (Escherichia coli 11368) |
4e-90 |
100 |
|
T3SS component |
NC_013353 (Escherichia coli 12009) |
4e-90 |
100 |
|
T3SS component |
NC_013364 (Escherichia coli 11128) |
7e-89 |
97 |
|
component of T3SS |
NC_011601 (Escherichia coli E2348/69) |
7e-89 |
97 |
|
hypothetical protein |
NC_013941 (Escherichia coli CB9615) |
9e-89 |
97 |
|
hypothetical protein |
NC_002655 (Escherichia coli EDL933) |
9e-89 |
97 |
|
hypothetical protein |
NC_017656 (Escherichia coli RM12579) |
9e-89 |
97 |
|
hypothetical protein |
NC_002695 (Escherichia coli Sakai) |
9e-89 |
97 |
|
LEE-encoded type III secretion system factor |
NC_013008 (Escherichia coli TW14359) |
9e-89 |
97 |
|
hypothetical protein |
NC_017906 (Escherichia coli Xuzhou21) |
9e-89 |
97 |
|
T3SS component |
NC_013716 (Citrobacter rodentium ICC168) |
8e-84 |
88 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='NC_013353_P1' AND ph.id_pai_orf='99' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc