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Homologs of SAPIG0476 gene of NC_017333_P1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) SAPIG0476
( YP_005733286.1 )

putative primase

NC_017333
(Staphylococcus aureus ST398)

0.0

100

2) C248_0455
( YP_006709216.1 )

primase

NC_018608
(Staphylococcus aureus 08BA02176)

0.0

3) SAOV_0421
( YP_005735937.1 )

putative DNA primase

NC_017337
(Staphylococcus aureus ED133)

0.0

4) SAUSA300_0809
( YP_493509.1 )

putative DNA primase

NC_007793
(Staphylococcus aureus FPR3757)

0.0

5) USA300HOU_0861
( YP_001574761.1 )

DNA primase

NC_010079
(Staphylococcus aureus TCH1516)

0.0

6) MW0751
( NP_645568.1 )

putative primase

NC_003923
(Staphylococcus aureus MW2)

0.0

7) SAOV_2058c
( YP_005737501.1 )

Putative DNA primase

NC_017337
(Staphylococcus aureus ED133)

0.0

8) SPSINT_0503
( YP_004148668.1 )

primase, superantigen-encoding pathogenicity islands SaPI

NC_014925
(Staphylococcus pseudintermedius HKU10-03)

0.0

9) SSP1940
( YP_302030.1 )

primase

NC_007350
(Staphylococcus saprophyticus ATCC 15305)

0.0

10) LMOSLCC5850_1262
( YP_006696089.1 )

phage-related DNA primase/helicase

NC_018592
(Listeria monocytogenes SLCC5850)

3e-130

11) lwe1216
( YP_849413.1 )

phage-related DNA primase/helicase

NC_008555
(Listeria welshimeri SLCC5334)

3e-130

12) M637_08975
( YP_008275590.1 )

DNA primase

NC_021824
(Listeria monocytogenes J2-064)

2e-129

13) SAT0131_00863
( YP_005752090.1 )

DNA primase

NC_017347
(Staphylococcus aureus T0131)

1e-122

• Sequence Alignments

1) SAPIG0476 in NC_017333


> NC_017333_P1|9|G9|387601765|YP_005733286.1|Staphylococcus_aureus_subsp._aureus_ST398|+|5092..7455|-|SAPIG0476|putative 
primase
Length=787

 Score = 1258 bits (4771),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 787/787 (100%), Positives = 787/787 (100%), Gaps = 0/787 (0%)

Query  1    MAIKKKDRIIGVKELEIPQELKLVPNWVLWRAEWNEKQQNYGKVPYSINGYRASTTNKKT  60
            MAIKKKDRIIGVKELEIPQELKLVPNWVLWRAEWNEKQQNYGKVPYSINGYRASTTNKKT
Sbjct  1    MAIKKKDRIIGVKELEIPQELKLVPNWVLWRAEWNEKQQNYGKVPYSINGYRASTTNKKT  60

Query  61   WCDFESVSIEYEVDEQYSGIGFVLSDGNNFVCLDIDNAIDEKGQINSELALKMMRLTYCE  120
            WCDFESVSIEYEVDEQYSGIGFVLSDGNNFVCLDIDNAIDEKGQINSELALKMMRLTYCE
Sbjct  61   WCDFESVSIEYEVDEQYSGIGFVLSDGNNFVCLDIDNAIDEKGQINSELALKMMRLTYCE  120

Query  121  KSPSGTGLHCFFKGKLPDNRKKKRTDLDIELYDSARFMTVTGCTIGQNDICDNQEVLNTL  180
            KSPSGTGLHCFFKGKLPDNRKKKRTDLDIELYDSARFMTVTGCTIGQNDICDNQEVLNTL
Sbjct  121  KSPSGTGLHCFFKGKLPDNRKKKRTDLDIELYDSARFMTVTGCTIGQNDICDNQEVLNTL  180

Query  181  VDEYFKENLPVNDVVREESNTNMQLSDEDIINIMMKSKQKDKIKDLLQGTYESYFESSSE  240
            VDEYFKENLPVNDVVREESNTNMQLSDEDIINIMMKSKQKDKIKDLLQGTYESYFESSSE
Sbjct  181  VDEYFKENLPVNDVVREESNTNMQLSDEDIINIMMKSKQKDKIKDLLQGTYESYFESSSE  240

Query  241  AVQSLLHYLAFYTGKNKQQMERIFLNYNNLTDKWESKRGNTTWGQLELDKAIKNQKTIYT  300
            AVQSLLHYLAFYTGKNKQQMERIFLNYNNLTDKWESKRGNTTWGQLELDKAIKNQKTIYT
Sbjct  241  AVQSLLHYLAFYTGKNKQQMERIFLNYNNLTDKWESKRGNTTWGQLELDKAIKNQKTIYT  300

Query  301  KSIDEFNVIPQGSKDVKQLLNQLGHEERTKMEENWIEEGKRGRKPTTISPIKCAYILNEH  360
            KSIDEFNVIPQGSKDVKQLLNQLGHEERTKMEENWIEEGKRGRKPTTISPIKCAYILNEH
Sbjct  301  KSIDEFNVIPQGSKDVKQLLNQLGHEERTKMEENWIEEGKRGRKPTTISPIKCAYILNEH  360

Query  361  LTFILFDDEENTKLAMYQFDEGIYTQNTTIIKRVISYLEPKHNSNKADEVIYHLTNMVDI  420
            LTFILFDDEENTKLAMYQFDEGIYTQNTTIIKRVISYLEPKHNSNKADEVIYHLTNMVDI
Sbjct  361  LTFILFDDEENTKLAMYQFDEGIYTQNTTIIKRVISYLEPKHNSNKADEVIYHLTNMVDI  420

Query  421  KEKTNSPYLIPVKNGVFNRKTKQLESFTPDYIFTTKISTKYNPNVVRPNLNGWDFDHWLY  480
            KEKTNSPYLIPVKNGVFNRKTKQLESFTPDYIFTTKISTKYNPNVVRPNLNGWDFDHWLY
Sbjct  421  KEKTNSPYLIPVKNGVFNRKTKQLESFTPDYIFTTKISTKYNPNVVRPNLNGWDFDHWLY  480

Query  481  EIACADKEIVTLLWEVINDSMNGNYTRKKAIFFVGDGNNGKGTFQELISNLVGYKNVASL  540
            EIACADKEIVTLLWEVINDSMNGNYTRKKAIFFVGDGNNGKGTFQELISNLVGYKNVASL
Sbjct  481  EIACADKEIVTLLWEVINDSMNGNYTRKKAIFFVGDGNNGKGTFQELISNLVGYKNVASL  540

Query  541  KVNEFDHEFKLSVLEGKAVVIGDDVPVGINIEDSSNFKSVVTGDSVLVNVKNKQPYRTEF  600
            KVNEFDHEFKLSVLEGKAVVIGDDVPVGINIEDSSNFKSVVTGDSVLVNVKNKQPYRTEF
Sbjct  541  KVNEFDHEFKLSVLEGKAVVIGDDVPVGINIEDSSNFKSVVTGDSVLVNVKNKQPYRTEF  600

Query  601  RCTVIQSTNGMPKFTDKTGETNRRLLIVPFNADFNDSNENVDIKEKYLKDNHVLEYVLYK  660
            RCTVIQSTNGMPKFTDKTGETNRRLLIVPFNADFNDSNENVDIKEKYLKDNHVLEYVLYK
Sbjct  601  RCTVIQSTNGMPKFTDKTGETNRRLLIVPFNADFNDSNENVDIKEKYLKDNHVLEYVLYK  660

Query  661  AINLEFDRFTIPQVSKKMLEIYKQDNDSVYDFKIEEFDQWNIQKVPKKVVYYRYRAFCEE  720
            AINLEFDRFTIPQVSKKMLEIYKQDNDSVYDFKIEEFDQWNIQKVPKKVVYYRYRAFCEE
Sbjct  661  AINLEFDRFTIPQVSKKMLEIYKQDNDSVYDFKIEEFDQWNIQKVPKKVVYYRYRAFCEE  720

Query  721  NGYMGKMSDRTFYRRFEKYLGKEWNTDAKCRYSSIDELEEIVGYINRTLMPFGQQHRSYK  780
            NGYMGKMSDRTFYRRFEKYLGKEWNTDAKCRYSSIDELEEIVGYINRTLMPFGQQHRSYK
Sbjct  721  NGYMGKMSDRTFYRRFEKYLGKEWNTDAKCRYSSIDELEEIVGYINRTLMPFGQQHRSYK  780

Query  781  NENLKIV  787
            NENLKIV
Sbjct  781  NENLKIV  787

2) C248_0455 in NC_018608


> NC_017333_P1|9|G9|387601765|YP_005733286.1|Staphylococcus_aureus_subsp._aureus_ST398|+|5092..7455|-|SAPIG0476|putative 
primase
Length=787

 Score = 1256 bits (4765),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 786/787 (99%), Positives = 786/787 (99%), Gaps = 0/787 (0%)

Query  1    MAIKKKDRIIGVKELEIPQELKLVPNWVLWRAEWNEKQQNYGKVPYSINGYRASTTNKKT  60
            MAIKKKDRIIGVKELEIPQELKLVPNWVLWRAEWNEKQQNYGKVPYSINGYRASTTNKKT
Sbjct  1    MAIKKKDRIIGVKELEIPQELKLVPNWVLWRAEWNEKQQNYGKVPYSINGYRASTTNKKT  60

Query  61   WCDFESVSIEYEVDEQYSGIGFVLSDGNNFVCLDIDNAIDEKGQINSELALKMMRLTYCE  120
            WCDFESVSIEYEVDEQYSGIGFVLSDGNNFVCLDIDNAIDEKGQINSELALKMMRLTYCE
Sbjct  61   WCDFESVSIEYEVDEQYSGIGFVLSDGNNFVCLDIDNAIDEKGQINSELALKMMRLTYCE  120

Query  121  KSPSGTGLHCFFKGKLPDNRKKKRTDLDIELYDSARFMTVTGCTIGQNDICDNQEVLNTL  180
            KSPSGTGLHCFFKGKLPDNRKKKRTDLDIELYDSARFMTVTGCTIGQNDICDNQEVLNTL
Sbjct  121  KSPSGTGLHCFFKGKLPDNRKKKRTDLDIELYDSARFMTVTGCTIGQNDICDNQEVLNTL  180

Query  181  VDEYFKENLPVNDVVREESNTNMQLSDEDIINIMMKSKQKDKIKDLLQGTYESYFESSSE  240
            VDEYFKENLPVNDVVREESNTNMQLSDEDIINIMMKSKQKDKIKDLLQGTYESYFESSSE
Sbjct  181  VDEYFKENLPVNDVVREESNTNMQLSDEDIINIMMKSKQKDKIKDLLQGTYESYFESSSE  240

Query  241  AVQSLLHYLAFYTGKNKQQMERIFLNYNNLTDKWESKRGNTTWGQLELDKAIKNQKTIYT  300
            AVQSLLHYLAFYTGKNKQQMERIFLNYNNLTDKWESKRGNTTWGQLELDKAIKNQKTIYT
Sbjct  241  AVQSLLHYLAFYTGKNKQQMERIFLNYNNLTDKWESKRGNTTWGQLELDKAIKNQKTIYT  300

Query  301  KSIDEFNVIPQGSKDVKQLLNQLGHEERTKMEENWIEEGKRGRKPTTISPIKCAYILNEH  360
            KSIDEFNVIPQGSKDVKQLLNQLGHEERTKMEENWIEEGKRGRKPTTISPIKCAYILNEH
Sbjct  301  KSIDEFNVIPQGSKDVKQLLNQLGHEERTKMEENWIEEGKRGRKPTTISPIKCAYILNEH  360

Query  361  LTFILFDDEENTKLAMYQFDEGIYTQNTTIIKRVISYLEPKHNSNKADEVIYHLTNMVDI  420
            LTFILFDDEENTKLAMYQFDEGIYTQNTTIIKRVISYLEPKHNSNKADEVIYHLTNMVDI
Sbjct  361  LTFILFDDEENTKLAMYQFDEGIYTQNTTIIKRVISYLEPKHNSNKADEVIYHLTNMVDI  420

Query  421  KEKTNSPYLIPVKNGVFNRKTKQLESFTPDYIFTTKISTKYNPNVVRPNLNGWDFDHWLY  480
            KEKTNSPYLIPVKNGVFNRKTKQLESFTPDYIFTTKISTKYNPNVVRPNLNGWDFDHWLY
Sbjct  421  KEKTNSPYLIPVKNGVFNRKTKQLESFTPDYIFTTKISTKYNPNVVRPNLNGWDFDHWLY  480

Query  481  EIACADKEIVTLLWEVINDSMNGNYTRKKAIFFVGDGNNGKGTFQELISNLVGYKNVASL  540
            EIACADKEIVTLLWEVINDSMNGNYTRKKAIFFVGDGNNGKGTFQELISNLVGYKNVASL
Sbjct  481  EIACADKEIVTLLWEVINDSMNGNYTRKKAIFFVGDGNNGKGTFQELISNLVGYKNVASL  540

Query  541  KVNEFDHEFKLSVLEGKAVVIGDDVPVGINIEDSSNFKSVVTGDSVLVNVKNKQPYRTEF  600
            KVNEFDHEFKLSVLEGKAVVIGDDVPVGINIEDSSNFKSVVTGDSVLVNVKNKQPYRTEF
Sbjct  541  KVNEFDHEFKLSVLEGKAVVIGDDVPVGINIEDSSNFKSVVTGDSVLVNVKNKQPYRTEF  600

Query  601  RCTVIQSTNGMPKFTDKTGGTNRRLLIVPFNADFNDSNENVDIKEKYLKDNHVLEYVLYK  660
            RCTVIQSTNGMPKFTDKTG TNRRLLIVPFNADFNDSNENVDIKEKYLKDNHVLEYVLYK
Sbjct  601  RCTVIQSTNGMPKFTDKTGETNRRLLIVPFNADFNDSNENVDIKEKYLKDNHVLEYVLYK  660

Query  661  AINLEFDRFTIPQVSKKMLEIYKQDNDSVYDFKIEEFDQWNIQKVPKKVVYYRYRAFCEE  720
            AINLEFDRFTIPQVSKKMLEIYKQDNDSVYDFKIEEFDQWNIQKVPKKVVYYRYRAFCEE
Sbjct  661  AINLEFDRFTIPQVSKKMLEIYKQDNDSVYDFKIEEFDQWNIQKVPKKVVYYRYRAFCEE  720

Query  721  NGYMGKMSDRTFYRRFEKYLGKEWNTDAKCRYSSIDELEEIVGYINRTLMPFGQQHRSYK  780
            NGYMGKMSDRTFYRRFEKYLGKEWNTDAKCRYSSIDELEEIVGYINRTLMPFGQQHRSYK
Sbjct  721  NGYMGKMSDRTFYRRFEKYLGKEWNTDAKCRYSSIDELEEIVGYINRTLMPFGQQHRSYK  780

Query  781  NENLKIV  787
            NENLKIV
Sbjct  781  NENLKIV  787

3) SAOV_0421 in NC_017337


> NC_017333_P1|9|G9|387601765|YP_005733286.1|Staphylococcus_aureus_subsp._aureus_ST398|+|5092..7455|-|SAPIG0476|putative 
primase
Length=787

 Score = 1251 bits (4747),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 781/787 (99%), Positives = 784/787 (99%), Gaps = 0/787 (0%)

Query  1    MAIKKKDSIIGVKELEIPQELKLVPNWVLWRAEWNEKQQNYGKVPYSINGYRASTTNKKT  60
            MAIKKKD IIGVKELEIPQELKLVPNWVLWRAEWNEKQQNYGKVPYSINGYRASTTNKKT
Sbjct  1    MAIKKKDRIIGVKELEIPQELKLVPNWVLWRAEWNEKQQNYGKVPYSINGYRASTTNKKT  60

Query  61   WCDFESVSIEYEVDEQYSGIGFVLSDGNNFVCLDIDNAIDKKGQINSELALKMMQLTYCE  120
            WCDFESVSIEYEVDEQYSGIGFVLSDGNNFVCLDIDNAID KGQINSELALKMM+LTYCE
Sbjct  61   WCDFESVSIEYEVDEQYSGIGFVLSDGNNFVCLDIDNAIDEKGQINSELALKMMRLTYCE  120

Query  121  KSPSGTGLHCFFKGKLPDNRKKKRTDLDIELYDSARFMTVTGCTIGQSDICDNQEVLNTL  180
            KSPSGTGLHCFFKGKLPDNRKKKRTDLDIELYDSARFMTVTGCTIGQ+DICDNQEVLNTL
Sbjct  121  KSPSGTGLHCFFKGKLPDNRKKKRTDLDIELYDSARFMTVTGCTIGQNDICDNQEVLNTL  180

Query  181  IDEYFKENLPVNDVVREESNTNMQLSDEDIINIMMKSKQKDKIKDLLQGTYESYFESSSE  240
            +DEYFKENLPVNDVVREESNTNMQLSDEDIINIMMKSKQKDKIKDLLQGTYESYFESSSE
Sbjct  181  VDEYFKENLPVNDVVREESNTNMQLSDEDIINIMMKSKQKDKIKDLLQGTYESYFESSSE  240

Query  241  AVQSLLHYLAFYTGKNKQQMERIFLNYNNLTDKWESKRGNTTWGQLELDKAIKNQKTIYT  300
            AVQSLLHYLAFYTGKNKQQMERIFLNYNNLTDKWESKRGNTTWGQLELDKAIKNQKTIYT
Sbjct  241  AVQSLLHYLAFYTGKNKQQMERIFLNYNNLTDKWESKRGNTTWGQLELDKAIKNQKTIYT  300

Query  301  KSIDEFNVIPQGSKDVKQLLNQLGHEERTKMEENWIEEGKRGRKPTTISPIKCAYILNEH  360
            KSIDEFNVIPQGSKDVKQLLNQLGHEERTKMEENWIEEGKRGRKPTTISPIKCAYILNEH
Sbjct  301  KSIDEFNVIPQGSKDVKQLLNQLGHEERTKMEENWIEEGKRGRKPTTISPIKCAYILNEH  360

Query  361  LTFILFDDEENTKLAMYQFDEGIYTQNTTIIKRVISYLEPKHNSNKADEVIYHLTNMVDI  420
            LTFILFDDEENTKLAMYQFDEGIYTQNTTIIKRVISYLEPKHNSNKADEVIYHLTNMVDI
Sbjct  361  LTFILFDDEENTKLAMYQFDEGIYTQNTTIIKRVISYLEPKHNSNKADEVIYHLTNMVDI  420

Query  421  KEKTNSPYLIPVKNGVFNRKTKQLESFTPDYIFTTKISTKYNPNVVRPNLNGWDFDHWLY  480
            KEKTNSPYLIPVKNGVFNRKTKQLESFTPDYIFTTKISTKYNPNVVRPNLNGWDFDHWLY
Sbjct  421  KEKTNSPYLIPVKNGVFNRKTKQLESFTPDYIFTTKISTKYNPNVVRPNLNGWDFDHWLY  480

Query  481  EIACADKEIVTLLWEVINDSMNGNYTRKKAIFFVGDGNNGKGTFQELISNLVGYKNVASL  540
            EIACADKEIVTLLWEVINDSMNGNYTRKKAIFFVGDGNNGKGTFQELISNLVGYKNVASL
Sbjct  481  EIACADKEIVTLLWEVINDSMNGNYTRKKAIFFVGDGNNGKGTFQELISNLVGYKNVASL  540

Query  541  KVNEFDHEFKLSVLEGKAVVIGDDVPVGINIEDSSNFKSVVTGDSVLVNVKNKQPYRTEF  600
            KVNEFDHEFKLSVLEGKAVVIGDDVPVGINIEDSSNFKSVVTGDSVLVNVKNKQPYRTEF
Sbjct  541  KVNEFDHEFKLSVLEGKAVVIGDDVPVGINIEDSSNFKSVVTGDSVLVNVKNKQPYRTEF  600

Query  601  RCTVIQSTNGMPKFTDKTGGTNRRLLIVPFNADFNDSNENVDIKEKYLKDNHVLEYVLYK  660
            RCTVIQSTNGMPKFTDKTG TNRRLLIVPFNADFNDSNENVDIKEKYLKDNHVLEYVLYK
Sbjct  601  RCTVIQSTNGMPKFTDKTGETNRRLLIVPFNADFNDSNENVDIKEKYLKDNHVLEYVLYK  660

Query  661  AINLEFDRFTIPQVSKKMLEIYKQDNDSVYDFKIEEFDQWNIQKVPKKVVYYRYRAFCEE  720
            AINLEFDRFTIPQVSKKMLEIYKQDNDSVYDFKIEEFDQWNIQKVPKKVVYYRYRAFCEE
Sbjct  661  AINLEFDRFTIPQVSKKMLEIYKQDNDSVYDFKIEEFDQWNIQKVPKKVVYYRYRAFCEE  720

Query  721  NGYMGKMSDRTFYRRFEKYLGKEWNTDAKCRYSSIDELEEIVGYINRTLMPFGQQHRSYK  780
            NGYMGKMSDRTFYRRFEKYLGKEWNTDAKCRYSSIDELEEIVGYINRTLMPFGQQHRSYK
Sbjct  721  NGYMGKMSDRTFYRRFEKYLGKEWNTDAKCRYSSIDELEEIVGYINRTLMPFGQQHRSYK  780

Query  781  NENLKIV  787
            NENLKIV
Sbjct  781  NENLKIV  787

4) SAUSA300_0809 in NC_007793


> NC_017333_P1|9|G9|387601765|YP_005733286.1|Staphylococcus_aureus_subsp._aureus_ST398|+|5092..7455|-|SAPIG0476|putative 
primase
Length=787

 Score = 1047 bits (3969),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 655/793 (83%), Positives = 729/793 (92%), Gaps = 9/793 (1%)

Query  1    MAIKKKDRIIGVKELEIPQELKLVPNWVLWRAEWNEKQQNFGKVPYSINGYRASTTNKKT  60
            MAIKKKDRIIGVKELEIPQELKLVPNWVLWRAEWNEKQQN+GKVPYSINGYRASTTNKKT
Sbjct  1    MAIKKKDRIIGVKELEIPQELKLVPNWVLWRAEWNEKQQNYGKVPYSINGYRASTTNKKT  60

Query  61   WCDFESVSIEYEVDEQYSGIGFVLSDGNNFVCLDIDNAIDKKGQINSELALKMMQLTYCE  120
            WCDFESVSIEYEVDEQYSGIGFVLSDGNNFVCLDIDNAID KGQINSELALKMM+LTYCE
Sbjct  61   WCDFESVSIEYEVDEQYSGIGFVLSDGNNFVCLDIDNAIDEKGQINSELALKMMRLTYCE  120

Query  121  KSPSGTGLHCFFKGKLPDNRKKKRTDLDIELYDSARFMTVTGCTIGQSDICDNQEVLNTL  180
            KSPSGTGLHCFFKGKLPDNRKKKRTDLDIELYDSARFMTVTGCTIGQ+DICDNQEVLNTL
Sbjct  121  KSPSGTGLHCFFKGKLPDNRKKKRTDLDIELYDSARFMTVTGCTIGQNDICDNQEVLNTL  180

Query  181  VDEYFKENLPANEVVREESNTNIQLSDEDIINIMMKSKQKDKIKDLLQGTYESYFESSSE  240
            VDEYFKENLP N+VVREESNTN+QLSDEDIINIMMKSKQKDKIKDLLQGTYESYFESSSE
Sbjct  181  VDEYFKENLPVNDVVREESNTNMQLSDEDIINIMMKSKQKDKIKDLLQGTYESYFESSSE  240

Query  241  AVQSLLHYLAFYTGKNKQQMERIFLNYNNLTDKWESKRGNTTWGQLELDKAIKNQKTIYT  300
            AVQSLLHYLAFYTGKNKQQMERIFLNYNNLTDKWESKRGNTTWGQLELDKAIKNQKTIYT
Sbjct  241  AVQSLLHYLAFYTGKNKQQMERIFLNYNNLTDKWESKRGNTTWGQLELDKAIKNQKTIYT  300

Query  301  KSIDEFNVIPQGSKDVKQLLNQLGHEERTKMEENWIEEGKRGRKPTTISPIKCAYILNEH  360
            KSIDEFNVIPQGSKDVKQLLNQLGHEERTKMEENWIEEGKRGRKPTTISPIKCAYILNEH
Sbjct  301  KSIDEFNVIPQGSKDVKQLLNQLGHEERTKMEENWIEEGKRGRKPTTISPIKCAYILNEH  360

Query  361  LTFILFDDEENTKLAMYQFDEGIYTQNTTIIKRVISYLEPKHNSNKADEVIYHLTNMVDI  420
            LTFILFDDEENTKLAMYQFDEGIYTQNTTIIKRVISYLEPKHNSNKADEVIYHLTNMVDI
Sbjct  361  LTFILFDDEENTKLAMYQFDEGIYTQNTTIIKRVISYLEPKHNSNKADEVIYHLTNMVDI  420

Query  421  KEKTNSPYLIPVKNGVFNRKTKQLESFTPDYIFTSKIDTSYVRQDIVPEINGWNIDRWIE  480
            KEKTNSPYLIPVKNGVFNRKTKQLESFTPDYIFT+KI T Y  + + P++NGW++D+W+ 
Sbjct  421  KEKTNSPYLIPVKNGVFNRKTKQLESFTPDYIFTTKISTKYNPNVVRPNLNGWDFDHWLY  480

Query  481  EIACNDNQVVKLLWQVINDSMNGNYTRKKAIFFVGDGNNGKGTFQELLSNVIGYSNIASL  540
            EIAC D+++V LLW+VINDSMNGNYTRKKAIFFVGDGNNGKGTFQEL+SN++GY N+ASL
Sbjct  481  EIACADKEIVTLLWEVINDSMNGNYTRKKAIFFVGDGNNGKGTFQELISNLVGYKNVASL  540

Query  541  KVNEFDERFKLSVLEGKTAvigddvpvgvyvddSSNFKSVVTGDPVLVEFKNKPLYRATF  600
            KVNEFD+ FKLSVLEGK+ VIGDDVPVG+ ++DSSNFKSVVTGD+VLV+ KNK  YR+ F
Sbjct  541  KVNEFDHEFKLSVLEGKAVVIGDDVPVGINIEDSSNFKSVVTGDSVLVNVKNKQPYRTEF  600

Query  601  KCTVIQSTNGMPKFKDKTGGTLRRLLIVPFNANFNGIKENFKIKEDYIKNQQVLEYVLYK  660
            +CTVIQSTNGMPKF DKTG T RRLLIVPFNA+FN+ +EN  IKE Y+K+++VLEYVLYK
Sbjct  601  RCTVIQSTNGMPKFTDKTGETNRRLLIVPFNADFNDSNENVDIKEKYLKDNHVLEYVLYK  660

Query  661  AINLDFETFDIPDASKKMLEVFKEDNDPVYGFKVNMFDQWTIRKVPKYIVYAFYKEYCDE  720
            AINL+F+ F IP+ SKKMLE++K+DND+VY+FK++ FDQW I+KVPK +VY  Y+ +C+E
Sbjct  661  AINLEFDRFTIPQVSKKMLEIYKQDNDSVYDFKIEEFDQWNIQKVPKKVVYYRYRAFCEE  720

Query  721  NGYNA-LSSNKFYKQFEHYLENYWKTDAQRRYDNEELAKRIYNFNDNRNYIEP--IESGK  777
            NGY + +S   FY++FE YL + W+TDA+ RY + +      ++++   YI+   +  G+
Sbjct  721  NGYMGKMSDRTFYRRFEKYLGKEWNTDAKCRYSSID------ELEEIVGYINRTLMPFGQ  774

Query  778  NYKSYEKVKLKAI  790
            + +SY + +LK +
Sbjct  775  QHRSYKNENLKIV  787

5) USA300HOU_0861 in NC_010079


> NC_017333_P1|9|G9|387601765|YP_005733286.1|Staphylococcus_aureus_subsp._aureus_ST398|+|5092..7455|-|SAPIG0476|putative 
primase
Length=787

 Score = 1047 bits (3969),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 655/793 (83%), Positives = 729/793 (92%), Gaps = 9/793 (1%)

Query  1    MAIKKKDRIIGVKELEIPQELKLVPNWVLWRAEWNEKQQNFGKVPYSINGYRASTTNKKT  60
            MAIKKKDRIIGVKELEIPQELKLVPNWVLWRAEWNEKQQN+GKVPYSINGYRASTTNKKT
Sbjct  1    MAIKKKDRIIGVKELEIPQELKLVPNWVLWRAEWNEKQQNYGKVPYSINGYRASTTNKKT  60

Query  61   WCDFESVSIEYEVDEQYSGIGFVLSDGNNFVCLDIDNAIDKKGQINSELALKMMQLTYCE  120
            WCDFESVSIEYEVDEQYSGIGFVLSDGNNFVCLDIDNAID KGQINSELALKMM+LTYCE
Sbjct  61   WCDFESVSIEYEVDEQYSGIGFVLSDGNNFVCLDIDNAIDEKGQINSELALKMMRLTYCE  120

Query  121  KSPSGTGLHCFFKGKLPDNRKKKRTDLDIELYDSARFMTVTGCTIGQSDICDNQEVLNTL  180
            KSPSGTGLHCFFKGKLPDNRKKKRTDLDIELYDSARFMTVTGCTIGQ+DICDNQEVLNTL
Sbjct  121  KSPSGTGLHCFFKGKLPDNRKKKRTDLDIELYDSARFMTVTGCTIGQNDICDNQEVLNTL  180

Query  181  VDEYFKENLPANEVVREESNTNIQLSDEDIINIMMKSKQKDKIKDLLQGTYESYFESSSE  240
            VDEYFKENLP N+VVREESNTN+QLSDEDIINIMMKSKQKDKIKDLLQGTYESYFESSSE
Sbjct  181  VDEYFKENLPVNDVVREESNTNMQLSDEDIINIMMKSKQKDKIKDLLQGTYESYFESSSE  240

Query  241  AVQSLLHYLAFYTGKNKQQMERIFLNYNNLTDKWESKRGNTTWGQLELDKAIKNQKTIYT  300
            AVQSLLHYLAFYTGKNKQQMERIFLNYNNLTDKWESKRGNTTWGQLELDKAIKNQKTIYT
Sbjct  241  AVQSLLHYLAFYTGKNKQQMERIFLNYNNLTDKWESKRGNTTWGQLELDKAIKNQKTIYT  300

Query  301  KSIDEFNVIPQGSKDVKQLLNQLGHEERTKMEENWIEEGKRGRKPTTISPIKCAYILNEH  360
            KSIDEFNVIPQGSKDVKQLLNQLGHEERTKMEENWIEEGKRGRKPTTISPIKCAYILNEH
Sbjct  301  KSIDEFNVIPQGSKDVKQLLNQLGHEERTKMEENWIEEGKRGRKPTTISPIKCAYILNEH  360

Query  361  LTFILFDDEENTKLAMYQFDEGIYTQNTTIIKRVISYLEPKHNSNKADEVIYHLTNMVDI  420
            LTFILFDDEENTKLAMYQFDEGIYTQNTTIIKRVISYLEPKHNSNKADEVIYHLTNMVDI
Sbjct  361  LTFILFDDEENTKLAMYQFDEGIYTQNTTIIKRVISYLEPKHNSNKADEVIYHLTNMVDI  420

Query  421  KEKTNSPYLIPVKNGVFNRKTKQLESFTPDYIFTSKIDTSYVRQDIVPEINGWNIDRWIE  480
            KEKTNSPYLIPVKNGVFNRKTKQLESFTPDYIFT+KI T Y  + + P++NGW++D+W+ 
Sbjct  421  KEKTNSPYLIPVKNGVFNRKTKQLESFTPDYIFTTKISTKYNPNVVRPNLNGWDFDHWLY  480

Query  481  EIACNDNQVVKLLWQVINDSMNGNYTRKKAIFFVGDGNNGKGTFQELLSNVIGYSNIASL  540
            EIAC D+++V LLW+VINDSMNGNYTRKKAIFFVGDGNNGKGTFQEL+SN++GY N+ASL
Sbjct  481  EIACADKEIVTLLWEVINDSMNGNYTRKKAIFFVGDGNNGKGTFQELISNLVGYKNVASL  540

Query  541  KVNEFDERFKLSVLEGKTAvigddvpvgvyvddSSNFKSVVTGDPVLVEFKNKPLYRATF  600
            KVNEFD+ FKLSVLEGK+ VIGDDVPVG+ ++DSSNFKSVVTGD+VLV+ KNK  YR+ F
Sbjct  541  KVNEFDHEFKLSVLEGKAVVIGDDVPVGINIEDSSNFKSVVTGDSVLVNVKNKQPYRTEF  600

Query  601  KCTVIQSTNGMPKFKDKTGGTLRRLLIVPFNANFNGIKENFKIKEDYIKNQQVLEYVLYK  660
            +CTVIQSTNGMPKF DKTG T RRLLIVPFNA+FN+ +EN  IKE Y+K+++VLEYVLYK
Sbjct  601  RCTVIQSTNGMPKFTDKTGETNRRLLIVPFNADFNDSNENVDIKEKYLKDNHVLEYVLYK  660

Query  661  AINLDFETFDIPDASKKMLEVFKEDNDPVYGFKVNMFDQWTIRKVPKYIVYAFYKEYCDE  720
            AINL+F+ F IP+ SKKMLE++K+DND+VY+FK++ FDQW I+KVPK +VY  Y+ +C+E
Sbjct  661  AINLEFDRFTIPQVSKKMLEIYKQDNDSVYDFKIEEFDQWNIQKVPKKVVYYRYRAFCEE  720

Query  721  NGYNA-LSSNKFYKQFEHYLENYWKTDAQRRYDNEELAKRIYNFNDNRNYIEP--IESGK  777
            NGY + +S   FY++FE YL + W+TDA+ RY + +      ++++   YI+   +  G+
Sbjct  721  NGYMGKMSDRTFYRRFEKYLGKEWNTDAKCRYSSID------ELEEIVGYINRTLMPFGQ  774

Query  778  NYKSYEKVKLKAI  790
            + +SY + +LK +
Sbjct  775  QHRSYKNENLKIV  787

6) MW0751 in NC_003923


> NC_017333_P1|9|G9|387601765|YP_005733286.1|Staphylococcus_aureus_subsp._aureus_ST398|+|5092..7455|-|SAPIG0476|putative 
primase
Length=787

 Score = 1041 bits (3947),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 653/793 (83%), Positives = 726/793 (92%), Gaps = 9/793 (1%)

Query  1    MAIKKKDRIIGVKELEIPQELKLVPNWVLWRAEWNEKQQNYGKVPYSINGYRASTTNKKT  60
            MAIKKKDRIIGVKELEIPQELKLVPNWVLWRAEWNEKQQNYGKVPYSINGYRASTTNKKT
Sbjct  1    MAIKKKDRIIGVKELEIPQELKLVPNWVLWRAEWNEKQQNYGKVPYSINGYRASTTNKKT  60

Query  61   WCDFESVSIEYEVDEQYSGIGFVLSDGNNFVCLDIDNAIDEKGQINSELALKMMRLTYCE  120
            WCDFESVSIEYEVDEQYSGIGFVLSDGNNFVCLDIDNAIDEKGQINSELALKMMRLTYCE
Sbjct  61   WCDFESVSIEYEVDEQYSGIGFVLSDGNNFVCLDIDNAIDEKGQINSELALKMMRLTYCE  120

Query  121  KSPSGTGLHCFFKGKLPDNRKKKRTDLDIELYDSARFMTVTGCTIGQNDICDNQEVLNTL  180
            KSPSGTGLHCFFKGKLPDNRKKKRTDLDIELYDSARFMTVTGCTIGQNDICDNQEVLNTL
Sbjct  121  KSPSGTGLHCFFKGKLPDNRKKKRTDLDIELYDSARFMTVTGCTIGQNDICDNQEVLNTL  180

Query  181  IDEYFKENLPVNDVVREESNTNMQLSDEDIINIMMKSKQKDKIKDLLQGTYESYFDSSSE  240
            +DEYFKENLPVNDVVREESNTNMQLSDEDIINIMMKSKQKDKIKDLLQGTYESYF+SSSE
Sbjct  181  VDEYFKENLPVNDVVREESNTNMQLSDEDIINIMMKSKQKDKIKDLLQGTYESYFESSSE  240

Query  241  AVQSLLHYLAFYTGKNKQQMERIFLNYNNLTDKWESKRGNTTWGQLELDKAIKNQKTVYT  300
            AVQSLLHYLAFYTGKNKQQMERIFLNYNNLTDKWESKRGNTTWGQLELDKAIKNQKT+YT
Sbjct  241  AVQSLLHYLAFYTGKNKQQMERIFLNYNNLTDKWESKRGNTTWGQLELDKAIKNQKTIYT  300

Query  301  KSIDEFNVIQQGSKDVKQLLNQLGHEERTKMEEKWIEGGKRGRKPTTISPIKCAYILNEH  360
            KSIDEFNVI QGSKDVKQLLNQLGHEERTKMEE+WIE GKRGRKPTTISPIKCAYILNEH
Sbjct  301  KSIDEFNVIPQGSKDVKQLLNQLGHEERTKMEENWIEEGKRGRKPTTISPIKCAYILNEH  360

Query  361  LTFILFDDEENTKLAMYQFDEGIYTQNTTIIKRVISYLEPKHNSNKADEVIYHLTNMVDI  420
            LTFILFDDEENTKLAMYQFDEGIYTQNTTIIKRVISYLEPKHNSNKADEVIYHLTNMVDI
Sbjct  361  LTFILFDDEENTKLAMYQFDEGIYTQNTTIIKRVISYLEPKHNSNKADEVIYHLTNMVDI  420

Query  421  KEKTNSPYLIPVKNGVFNRKTKQLESFTPDCIFTTKIDTSYVRQDIVPEINGWNIDRWIE  480
            KEKTNSPYLIPVKNGVFNRKTKQLESFTPD IFTTKI T Y  + + P++NGW++D+W+ 
Sbjct  421  KEKTNSPYLIPVKNGVFNRKTKQLESFTPDYIFTTKISTKYNPNVVRPNLNGWDFDHWLY  480

Query  481  EIACNDNQVVKLLWQVINDSMNGNYTRKKAIFLVGNGNNGKGTFQELLSNVIGYSNIASL  540
            EIAC D+++V LLW+VINDSMNGNYTRKKAIF+VG+GNNGKGTFQEL+SN++GY N+ASL
Sbjct  481  EIACADKEIVTLLWEVINDSMNGNYTRKKAIFFVGDGNNGKGTFQELISNLVGYKNVASL  540

Query  541  KVNEFDERFKLSVLEGKTAvigddvpvgvyvddSSNFKSVVTGDPVLVEFKNKPLYRATF  600
            KVNEFD+ FKLSVLEGK+ VIGDDVPVG+ ++DSSNFKSVVTGD+VLV+ KNK  YR+ F
Sbjct  541  KVNEFDHEFKLSVLEGKAVVIGDDVPVGINIEDSSNFKSVVTGDSVLVNVKNKQPYRTEF  600

Query  601  KCTVIQSTNGMPKFKDKTGGTLRRLLIVPFNANFNGIKENFKIKEDYIKNPQVLEYVLYK  660
            +CTVIQSTNGMPKF DKTG T RRLLIVPFNA+FN+ +EN  IKE Y+K+ +VLEYVLYK
Sbjct  601  RCTVIQSTNGMPKFTDKTGETNRRLLIVPFNADFNDSNENVDIKEKYLKDNHVLEYVLYK  660

Query  661  AINLDFETFDIPDASEKMLEVFKEDNDPVYGFKVNMFDQWTIRKVPKYIVYAFYKEYCDE  720
            AINL+F+ F IP+ S KMLE++K+DND+VY+FK++ FDQW I+KVPK +VY  Y+ +C+E
Sbjct  661  AINLEFDRFTIPQVSKKMLEIYKQDNDSVYDFKIEEFDQWNIQKVPKKVVYYRYRAFCEE  720

Query  721  NGYNA-LSSNKFYKQFEHYLENYWKTDAQRRYDNEELAKRIYNFNDNRNYIEP--IESGK  777
            NGY + +S   FY++FE YL + W+TDA+ RY + +      ++++   YI+   +  G+
Sbjct  721  NGYMGKMSDRTFYRRFEKYLGKEWNTDAKCRYSSID------ELEEIVGYINRTLMPFGQ  774

Query  778  NYKSYEKVKLKAI  790
            + +SY + +LK +
Sbjct  775  QHRSYKNENLKIV  787

7) SAOV_2058c in NC_017337


> NC_017333_P1|9|G9|387601765|YP_005733286.1|Staphylococcus_aureus_subsp._aureus_ST398|+|5092..7455|-|SAPIG0476|putative 
primase
Length=787

 Score = 1037 bits (3931),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 649/793 (82%), Positives = 727/793 (92%), Gaps = 9/793 (1%)

Query  1    MAIKKKDRIIGVKELEIPQELKLVPNWVLWRAEWNEKQQNYGKVPYSINGYRASTTNKKT  60
            MAIKKKDRIIGVKELEIPQELKLVPNWVLWRAEWNEKQQNYGKVPYSINGYRASTTNKKT
Sbjct  1    MAIKKKDRIIGVKELEIPQELKLVPNWVLWRAEWNEKQQNYGKVPYSINGYRASTTNKKT  60

Query  61   WCDFESVSIEYEVDEQYSGIGFVLSDGNNFVCLDIDNAIDKKGQINSELALKMMQLTYCE  120
            WCDFESVSIEYEVDEQYSGIGFVLSDGNNFVCLDIDNAID KGQINSELALKMM+LTYCE
Sbjct  61   WCDFESVSIEYEVDEQYSGIGFVLSDGNNFVCLDIDNAIDEKGQINSELALKMMRLTYCE  120

Query  121  KSPSGTGLHCFFKGKLPDNRKKKRTDLDIELYDSARFMTVTGCTIGQSDICDNQEVLNTL  180
            KSPSGTGLHCFFKGKLPDNRKKKRTDLDIELYDSARFMTVTGCTIGQ+DICDNQEVLNTL
Sbjct  121  KSPSGTGLHCFFKGKLPDNRKKKRTDLDIELYDSARFMTVTGCTIGQNDICDNQEVLNTL  180

Query  181  IDEYFKENLPVNDVVREESNTNMQLSDEDIINIMMKSKQKDKIKDLLQGTYESYFKSSSE  240
            +DEYFKENLPVNDVVREESNTNMQLSDEDIINIMMKSKQKDKIKDLLQGTYESYF SSSE
Sbjct  181  VDEYFKENLPVNDVVREESNTNMQLSDEDIINIMMKSKQKDKIKDLLQGTYESYFESSSE  240

Query  241  AVQSLLHYLAFYTGKNKQQMERIFLNYNNLTDKWESKRGNTTWGQLELDKAIKNQKTVCT  300
            AVQSLLHYLAFYTGKNKQQMERIFLNYNNLTDKWESKRGNTTWGQLELDKAIKNQKT+ T
Sbjct  241  AVQSLLHYLAFYTGKNKQQMERIFLNYNNLTDKWESKRGNTTWGQLELDKAIKNQKTIYT  300

Query  301  KSIDEFNVIQQGSKDIKQLLNQLGHEERTKMEENWIEEGKRGRKPTTISPIKCAYILNEH  360
            KSIDEFNVI QGSKD+KQLLNQLGHEERTKMEENWIEEGKRGRKPTTISPIKCAYILNEH
Sbjct  301  KSIDEFNVIPQGSKDVKQLLNQLGHEERTKMEENWIEEGKRGRKPTTISPIKCAYILNEH  360

Query  361  LTFILFDDEENTKLAMYQFDEGIYTQNTTIIKRVISYLEPKHNSNKADEVIYHLTNMVDI  420
            LTFILFDDEENTKLAMYQFDEGIYTQNTTIIKRVISYLEPKHNSNKADEVIYHLTNMVDI
Sbjct  361  LTFILFDDEENTKLAMYQFDEGIYTQNTTIIKRVISYLEPKHNSNKADEVIYHLTNMVDI  420

Query  421  KEKTNSPYLIPVKNDVFNRKTKQLESFTPDYIFTSKIDTSYVRQDIVPEINGWNIDRWIE  480
            KEKTNSPYLIPVKN+VFNRKTKQLESFTPDYIFT+KI T Y  + + P++NGW++D+W+ 
Sbjct  421  KEKTNSPYLIPVKNGVFNRKTKQLESFTPDYIFTTKISTKYNPNVVRPNLNGWDFDHWLY  480

Query  481  EIACNDNQVVKLLWQVINDSMNGNYTRKKALFLVGNGNNGKGTFQELLSNVIGYSNIASL  540
            EIAC D+++V LLW+VINDSMNGNYTRKKA+F+VG+GNNGKGTFQEL+SN++GY N+ASL
Sbjct  481  EIACADKEIVTLLWEVINDSMNGNYTRKKAIFFVGDGNNGKGTFQELISNLVGYKNVASL  540

Query  541  KVNEFDERFKLSVLEGKTAvigddvpvgvyvddSSNFKSVVTGDPVLVEFKNKPLYRATF  600
            KVNEFD+ FKLSVLEGK+ VIGDDVPVG+ ++DSSNFKSVVTGD+VLV+ KNK  YR+ F
Sbjct  541  KVNEFDHEFKLSVLEGKAVVIGDDVPVGINIEDSSNFKSVVTGDSVLVNVKNKQPYRTEF  600

Query  601  KCTVIQSTNGMPKFKDKTGGTLRRLLIVPFNANFNGIKENFKIKEDYIKNQQVLEYVLYK  660
            +CTVIQSTNGMPKF DKTG T RRLLIVPFNA+FN+ +EN  IKE Y+K+++VLEYVLYK
Sbjct  601  RCTVIQSTNGMPKFTDKTGETNRRLLIVPFNADFNDSNENVDIKEKYLKDNHVLEYVLYK  660

Query  661  AINLDFETFDIPDASKKMLEVFKEDNDPVYGFKVNMFDQWTIRKVPKYIVYAFYKEYCDE  720
            AINL+F+ F IP+ SKKMLE++K+DND+VY+FK++ FDQW I+KVPK +VY  Y+ +C+E
Sbjct  661  AINLEFDRFTIPQVSKKMLEIYKQDNDSVYDFKIEEFDQWNIQKVPKKVVYYRYRAFCEE  720

Query  721  NGYNA-LSSNKFYKQFEHYLENYWKTDAQRRYDNEELAKRIYNFNDNRNYIEP--IESGK  777
            NGY + +S   FY++FE YL + W+TDA+ RY + +      ++++   YI+   +  G+
Sbjct  721  NGYMGKMSDRTFYRRFEKYLGKEWNTDAKCRYSSID------ELEEIVGYINRTLMPFGQ  774

Query  778  NYKSYEKVKLKAI  790
            + +SY + +LK +
Sbjct  775  QHRSYKNENLKIV  787

8) SPSINT_0503 in NC_014925


> NC_017333_P1|9|G9|387601765|YP_005733286.1|Staphylococcus_aureus_subsp._aureus_ST398|+|5092..7455|-|SAPIG0476|putative 
primase
Length=787

 Score =  922 bits (3494),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 524/789 (67%), Positives = 672/789 (86%), Gaps = 2/789 (0%)

Query  1    MALKVKDNILRVNEDNIPKELKEIPNWVLWCAKWNEKQQNYSKVPYNDKGYRASSNNKNT  60
            MA+K KD I+ V+E +IP+ELK +PNWVLW A WNEKQQNY+KVPY+ +GYRAS+ NK+T
Sbjct  1    MAIKKKDRIIGVKELEIPQELKLVPNWVLWRAEWNEKQQNYGKVPYSINGYRASTTNKKT  60

Query  61   WTDFNTAYIEYEMNEKYSGIGFVLSGDNEYICLDIDNAVSDNGEIHSDLVKTLNKMTYCE  120
            W DF++  IEYE++E+YSGIGFVLS++N+++CLDIDNA+ ++G+I+S+L   + ++TYCE
Sbjct  61   WCDFESVSIEYEVDEQYSGIGFVLSDGNNFVCLDIDNAIDEKGQINSELALKMMRLTYCE  120

Query  121  KSPSGTGVHCFFKGKLPSNRKKKRTDLDIELYDTARFMTVTGESIGQSEISEDQTILNNL  180
            KSPSGTG+HCFFKGKLP NRKKKRTDLDIELYD+ARFMTVTG +IGQ++I ++Q +LN L
Sbjct  121  KSPSGTGLHCFFKGKLPDNRKKKRTDLDIELYDSARFMTVTGCTIGQNDICDNQEVLNTL  180

Query  181  VEQYFKEEASFEATTTNNHNSESQLSDEEVINIMLKSKQKDKISDLLQGDYEQYFASPSE  240
            V++YFKE+ + +    ++ N++ QLSDE++INIM+KSKQKDKI DLLQG YE YF S+SE
Sbjct  181  VDEYFKENLPVNDVVREESNTNMQLSDEDIINIMMKSKQKDKIKDLLQGTYESYFESSSE  240

Query  241  AVQSLLHYLAFYTGKNKAQMERIFLTYNNLTDKWNSKRGNSTWGELELEKAIANQKEVYQ  300
            AVQSLLHYLAFYTGKNK QMERIFL YNNLTDKW+SKRGN+TWG+LEL+KAI NQK +Y 
Sbjct  241  AVQSLLHYLAFYTGKNKQQMERIFLNYNNLTDKWESKRGNTTWGQLELDKAIKNQKTIYT  300

Query  301  KGINDFEVILSDKESVRKMLSKVGDDERSYMEKLWIEEGEKGRKPTVISPNRCAHLLKEN  360
            K+I++F+VI  +   V+++L+++G++ER+ ME  WIEEG +GRKPT ISP +CA +L+E+
Sbjct  301  KSIDEFNVIPQGSKDVKQLLNQLGHEERTKMEENWIEEGKRGRKPTTISPIKCAYILNEH  360

Query  361  LKFILFDLEENTKLAMYRAEEGIYTQNVSYIKRVISWLEPKLNSNKADEVIYHLKNRVDI  420
            L FILFD EENTKLAMY+ +EGIYTQN + IKRVIS LEPK NSNKADEVIYHL N VDI
Sbjct  361  LTFILFDDEENTKLAMYQFDEGIYTQNTTIIKRVISYLEPKHNSNKADEVIYHLTNMVDI  420

Query  421  KSKTNSPDLIPVKNGVFNRKTKQLEPFTPEYVFTTKINTAYKTQSGVPVIEGWSVDNWIN  480
            K KTNSP LIPVKNGVFNRKTKQLE+FTP+Y+FTTKI+T Y+ +   P ++GW  D+W+ 
Sbjct  421  KEKTNSPYLIPVKNGVFNRKTKQLESFTPDYIFTTKISTKYNPNVVRPNLNGWDFDHWLY  480

Query  481  EIACNDHGVAKLLWQVINDSLNGNYTRKKAIFLVGDGNNGKGTFQELISQLIGAENIASL  540
            EIAC D  +  LLW+VINDS+NGNYTRKKAIF+VGDGNNGKGTFQELIS+L+G  N+ASL
Sbjct  481  EIACADKEIVTLLWEVINDSMNGNYTRKKAIFFVGDGNNGKGTFQELISNLVGYKNVASL  540

Query  541  KVNEFDERFKLSVLEGKTAVIGDDVPVGVYIDDSSNFKSVVTGDPVLVEFKNQPLYRATF  600
            KVNEFD+ FKLSVLEGK+ VIGDDVPVG+ I+DSSNFKSVVTGD+VLV+ KN+  YR+ F
Sbjct  541  KVNEFDHEFKLSVLEGKAVVIGDDVPVGINIEDSSNFKSVVTGDSVLVNVKNKQPYRTEF  600

Query  601  KCTVIQSTNGMPSFKDKTSGTLRRLLIVPFNANFNGQSENFNIKEQYVKNQKVLEYVLYR  660
            +CTVIQSTNGMP F DKT+ T RRLLIVPFNA+FN+ +EN +IKE+Y+K++ VLEYVLY+
Sbjct  601  RCTVIQSTNGMPKFTDKTGETNRRLLIVPFNADFNDSNENVDIKEKYLKDNHVLEYVLYK  660

Query  661  SINMDFDTFDIPEASNNMLDIYKQDNDPVYDFKVNVFDEWVVKTIPKKVVYYKYKEFCEH  720
            +IN++FD F IP+ S++ML+IYKQDND+VYDFK++ FD+W ++ +PKKVVYY+Y+ FCE+
Sbjct  661  AINLEFDRFTIPQVSKKMLEIYKQDNDSVYDFKIEEFDQWNIQKVPKKVVYYRYRAFCEE  720

Query  721  SGYTGVLSDRKFYKSFEGYLGEKWDTDDRGRFSNDDISDLDQKIGYFNKALVIPNKQCRI  780
            +GY G +SDR FY+ FE YLG  W+TD + R+S+  I +L++ +GY+N++L+   +Q R 
Sbjct  721  NGYMGKMSDRTFYRRFEKYLGKEWNTDAKCRYSS--IDELEEIVGYINRTLMPFGQQHRS  778

Query  781  YRNENLKIV  789
            Y+NENLKIV
Sbjct  779  YKNENLKIV  787

9) SSP1940 in NC_007350


> NC_017333_P1|9|G9|387601765|YP_005733286.1|Staphylococcus_aureus_subsp._aureus_ST398|+|5092..7455|-|SAPIG0476|putative 
primase
Length=787

 Score =  817 bits (3092),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 481/792 (61%), Positives = 626/792 (80%), Gaps = 17/792 (2%)

Query  1    MAIKTKDSIIDVNELEIPNELKQLNQWVLWRAEWNESRQEYKKVPYQVNGVKASSTNKDT  60
            MAIK KD II+V+ELEIP+ELK + +WVLWRAEWNE +Q+Y KVPY +NG +AS+TNK T
Sbjct  1    MAIKKKDRIIGVKELEIPQELKLVPNWVLWRAEWNEKQQNYGKVPYSINGYRASTTNKKT  60

Query  61   WSNFQDVYSLYDSSNGYDGIGFILSKESKHICLDIDNAVDAETHQLQTELGLEMTELTYC  120
            W +F+ V   Y+  + Y GIGF+LS  ++ +CLDIDNA+D E  Q+++EL+L M  LTYC
Sbjct  61   WCDFESVSIEYEVDEQYSGIGFVLSDGNNFVCLDIDNAID-EKGQINSELALKMMRLTYC  119

Query  121  ELSPSGTGLHCFFKGTLPENRKSKRTDLDIELYHTSRFMTFTGYTIGGSEISDDQGVIDN  180
            E SPSGTGLHCFFKG LP+NRK KRTDLDIELY+++RFMT TG TIG ++I D+Q V++ 
Sbjct  120  EKSPSGTGLHCFFKGKLPDNRKKKRTDLDIELYDSARFMTVTGCTIGQNDICDNQEVLNT  179

Query  181  LVERFFKAE-PKKQNIRIAKTGSSIFTDDEIVRMMTK---KSKYKKLLAGEYEGIFDSPS  236
            LV+ +FK + P ++ +R     +  ++D++I+ +M K   K K K LL G YE+ F+S+S
Sbjct  180  LVDEYFKENLPVNDVVREESNTNMQLSDEDIINIMMKSKQKDKIKDLLQGTYESYFESSS  239

Query  237  EAVQSLLRVLAFYTGRDKSQMESIFLTYNNLTDKWDEKRGNSTWGNNELDTAIANQETIY  296
            EAVQSLL+ LAFYTG++K QME IFL YNNLTDKW+ KRGN+TWG+ ELD AI NQ TIY
Sbjct  240  EAVQSLLHYLAFYTGKNKQQMERIFLNYNNLTDKWESKRGNTTWGQLELDKAIKNQKTIY  299

Query  297  EPNS------RGTGQSLRYTISLIRKEELAFMKAEFEKAKENGEASGRPPQTISSNRCAV  350
              +          ++ ++  ++ +  EE    ++  E    +    GR P TIS+ +CA 
Sbjct  300  TKSIDEFNVIPQGSKDVKQLLNQLGHEE----RTKMEENWIEEGKRGRKPTTISPIKCAY  355

Query  351  LLNDVIKFVIFDMEENTKLAMYQSDKGIYTQNTAIIKRIISWLEPRHNEKKALEVIYHLT  410
            +LN+ + F++FD EENTKLAMYQ D GIYTQNT+IIKR+IS LEP+HN +KA EVIYHLT
Sbjct  356  ILNEHLTFILFDDEENTKLAMYQFDEGIYTQNTTIIKRVISYLEPKHNSNKADEVIYHLT  415

Query  411  NMVDVVDKTNEPHLIPVNNGVFNRKSMKLESFTPKYIFTTKISTNYIDNPKTPVINGWSF  470
            NMVD+ +KTN P LIPV+NGVFNRK+ +LESFTP YIFTTKIST+Y  N   P +NGW F
Sbjct  416  NMVDIKEKTNSPYLIPVKNGVFNRKTKQLESFTPDYIFTTKISTKYNPNVVRPNLNGWDF  475

Query  471  DNWLEEVACGDREVFTLLWQVINDSLNGNYTRKKAIFLVGDGNNAKGSYQTLLTNLIGFD  530
            D+WL E+AC+D+E+ TLLW+VINDS+NGNYTRKKAIF+VGDGNN+KG++Q L++NL+G+ 
Sbjct  476  DHWLYEIACADKEIVTLLWEVINDSMNGNYTRKKAIFFVGDGNNGKGTFQELISNLVGYK  535

Query  531  NVASLKVNEFDQEFKLGVLEGKTLVIGDDVPVGVNIEDSSNFNSVITGDPVLVNIKNKQP  590
            NVASLKVNEFD+EFKL+VLEGK++VIGDDVPVG+NIEDSSNF+SV+TGD+VLVN+KNKQP
Sbjct  536  NVASLKVNEFDHEFKLSVLEGKAVVIGDDVPVGINIEDSSNFKSVVTGDSVLVNVKNKQP  595

Query  591  YRTVFRTTVIQSTNGMPRFKNKTGGTNRRLLIVPFNADFNGAKENPNIKEKYLTDKKVLE  650
            YRT FR TVIQSTNGMP+F +KTG TNRRLLIVPFNADFN+++EN +IKEKYL D+ VLE
Sbjct  596  YRTEFRCTVIQSTNGMPKFTDKTGETNRRLLIVPFNADFNDSNENVDIKEKYLKDNHVLE  655

Query  651  YVLHKAINLNFNKFIVPRASAKLLEEYIQDNDPVYDFKVTEFDKWKIDKVPKAVVYFRYK  710
            YVL KAINL+F++F +P+ S K+LE Y QDND+VYDFK+ EFD+W+I+KVPK VVY+RY+
Sbjct  656  YVLYKAINLEFDRFTIPQVSKKMLEIYKQDNDSVYDFKIEEFDQWNIQKVPKKVVYYRYR  715

Query  711  VFCERGGYRA-LSERKFCKSFERYLDKSWKVE-RPRYYSVNDLQAKVGHFEPTLLPHGEQ  768
             FCE  GY + +S+R F + FE+YL+K W+ + + RY S+++L+  VG ++ TL+P G+Q
Sbjct  716  AFCEENGYMGKMSDRTFYRRFEKYLGKEWNTDAKCRYSSIDELEEIVGYINRTLMPFGQQ  775

Query  769  KISYVNTILKVV  780
              SY N  LK+V
Sbjct  776  HRSYKNENLKIV  787

10) LMOSLCC5850_1262 in NC_018592


> NC_017333_P1|9|G9|387601765|YP_005733286.1|Staphylococcus_aureus_subsp._aureus_ST398|+|5092..7455|-|SAPIG0476|putative 
primase
Length=787

 Score =  459 bits (1730),  Expect = 3e-130, Method: Compositional matrix adjust.
 Identities = 313/745 (43%), Positives = 509/745 (69%), Gaps = 24/745 (3%)

Query  4    QIPDELKKLKQWCAFQLVWDEERGKNKKIPMNANTGAY-GNSVDERTWADFETALASLE-  61
            +IP+ELK + +W   +  W+E + +  K+P + N  +Y +++ + +TW DFE+     E 
Sbjct  16   EIPQELKLVPNWVLWRAEWNEKQQNYGKVPYSIN--GYRASTTNKKTWCDFESVSIEYEV  73

Query  62   KYQFDGLGFYFK-APYFGVdiddikddiqdYLYGNTENIAGEFIQTLA--SYTEYSVSGT  118
              Q+ G+GF +  +  F     D          ++  +I +E+   +   +Y E S SGT
Sbjct  74   DEQYSGIGFVLSDGNNFVCLDIDNAI-------DEKGQINSELALKMMRLTYCEKSPSGT  126

Query  119  GIHIIAKGDFPEGGRRKG---NIEMYPDGRFFVMTGQVIDNYRQVNEATSAIKILHEKYI  175
            G+H + KG +P+  ++K    +IE+Y  +RF  +TG  I++  ++ +    ++ L + Y+
Sbjct  127  GLHCFFKGKLPDNRKKKRTDLDIELYDSARFMTVTGCTIGQ-NDICDNQEVLNTLVDEYF  185

Query  176  -GTIENTSLTKHQNSSN-DLSESEILEKAYNSQNGPYFKTLYEGNWEAYYASQSDADLAF  233
               +    + ++++++N +LS+ +I++   +S++   +K L +G  E+Y+ S S+A  ++
Sbjct  186  KENLPVNDVVREESNTNMQLSDEDIINIMMKSKQKDKIKDLLQGTYESYFESSSEAVQSL  245

Query  234  ANMLAFWTAADYDKMDTIFRDSGLMRDKWDQKRGQNTYGQITLGKAISGCSEVYSPKQSG  293
             + LAF T+ + ++M+ IF +   + DKW+ KRG+ T GQ+ L+KAI     +Y+  +S 
Sbjct  246  LHYLAFYTGKNKQQMERIFLNYNNLTDKWESKRGNTTWGQLELDKAIKNQKTIYT--KSI  303

Query  294  NSYNINLKSRKNWAQllnerrkkeleklkeeWLISGGKGKQPSVISPIGCAIILKEFFRF  353
            + +N+  ++ K+  QLLN+    E  K+ E+W+  G +G++P+ ISPI CA IL+E + F
Sbjct  304  DEFNVIPQGSKDVKQLLNQLGHEERTKMEENWIEEGKRGRKPTTISPIKCAYILNEHLTF  363

Query  354  CLFNMNENTRLAMYLEEDGIWTQNETYIRRFIGFLEPTLNANKASDVIYHLWKGAEVKEK  413
             LF+ +ENT+LAMY  ++GI TQN T I+R I++LEP  N+NKA +VIYHL +  ++KEK
Sbjct  364  ILFDDEENTKLAMYQFDEGIYTQNTTIIKRVISYLEPKHNSNKADEVIYHLTNMVDIKEK  423

Query  414  TVSKYLIPVKNGVFNLKTKKLEAFTPDYVFTSKIATPYVANPPKQNINGWDVHTWLDEIA  473
            T S YLIPVKNGVFN KTK+LE+FTPDY+FT+KI+T Y +N  + N+NGWD + WL EIA
Sbjct  424  TNSPYLIPVKNGVFNRKTKQLESFTPDYIFTTKISTKYNPNVVRPNLNGWDFDHWLYEIA  483

Query  474  CGDEQITSLLWQVISASLNGNYSRKSSIWLLGDGNNGKGTFQQLLRNLIGNSNIATLKLP  533
            C+D +I +LLW+VI+ S+NGNY+RK +I ++GDGNNGKGTFQ+L+ NL+G  N+A+LK+ 
Sbjct  484  CADKEIVTLLWEVINDSMNGNYTRKKAIFFVGDGNNGKGTFQELISNLVGYKNVASLKVN  543

Query  534  QFQERFSLSILEEKVCCIGDDVPAGVYIDDSSNFNSVVTGDEIMVEQKNKHPYSANFHMT  593
            +F++ F LS+LE K   IGDDVP G+ I+DSSNF+SVVTGD ++V+ KNK+PY ++F+ T
Sbjct  544  EFDHEFKLSVLEGKAVVIGDDVPVGINIEDSSNFKSVVTGDSVLVNVKNKQPYRTEFRCT  603

Query  594  VIQSTNGMPKMRNKTDGTYRRFIIVPFKANLKGGKDNWKIKDEYIQNKEVLQYILFHAIN  653
            VIQSTNGMPK  +KT+ T RR++IVPF+A+++++++N  IK+ Y+++++VL+Y+L+ AIN
Sbjct  604  VIQSTNGMPKFTDKTGETNRRLLIVPFNADFNDSNENVDIKEKYLKDNHVLEYVLYKAIN  663

Query  654  MDFERFVEPDVSKKIMEEYKLDNDPILDYYERIFKEYKSTRIPLYVVYEFYKYFCESNN-  712
            ++F+RF  P+VSKK++E YK DND++ D+    F + +  ++P  VVY  Y+ FCE N  
Sbjct  664  LEFDRFTIPQVSKKMLEIYKQDNDSVYDFKIEEFDQWNIQKVPKKVVYYRYRAFCEENGY  723

Query  713  LKPVGDRSFYKRFGEILSEEGWEKG  737
            +  ++DR+FY+RF   L+ E W+ +
Sbjct  724  MGKMSDRTFYRRFEKYLGKE-WNTD  747

11) lwe1216 in NC_008555


> NC_017333_P1|9|G9|387601765|YP_005733286.1|Staphylococcus_aureus_subsp._aureus_ST398|+|5092..7455|-|SAPIG0476|putative 
primase
Length=787

 Score =  459 bits (1730),  Expect = 3e-130, Method: Compositional matrix adjust.
 Identities = 313/745 (43%), Positives = 509/745 (69%), Gaps = 24/745 (3%)

Query  4    QIPDELKKLKQWCAFQLVWDEERGKNKKIPMNANTGAY-GNSVDERTWADFETALASLE-  61
            +IP+ELK + +W   +  W+E + +  K+P + N  +Y +++ + +TW DFE+     E 
Sbjct  16   EIPQELKLVPNWVLWRAEWNEKQQNYGKVPYSIN--GYRASTTNKKTWCDFESVSIEYEV  73

Query  62   KYQFDGLGFYFK-APYFGVdiddikddiqdYLYGNTENIAGEFIQTLA--SYTEYSVSGT  118
              Q+ G+GF +  +  F     D          ++  +I +E+   +   +Y E S SGT
Sbjct  74   DEQYSGIGFVLSDGNNFVCLDIDNAI-------DEKGQINSELALKMMRLTYCEKSPSGT  126

Query  119  GIHIIAKGDFPEGGRRKG---NIEMYPDGRFFVMTGQVIDNYRQVNEATSAIKILHEKYI  175
            G+H + KG +P+  ++K    +IE+Y  +RF  +TG  I++  ++ +    ++ L + Y+
Sbjct  127  GLHCFFKGKLPDNRKKKRTDLDIELYDSARFMTVTGCTIGQ-NDICDNQEVLNTLVDEYF  185

Query  176  -GTIENTSLTKHQNSSN-DLSESEILEKAYNSQNGPYFKTLYEGNWEAYYASQSDADLAF  233
               +    + ++++++N +LS+ +I++   +S++   +K L +G  E+Y+ S S+A  ++
Sbjct  186  KENLPVNDVVREESNTNMQLSDEDIINIMMKSKQKDKIKDLLQGTYESYFESSSEAVQSL  245

Query  234  ANMLAFWTAADYDKMDTIFRDSGLMRDKWDQKRGQNTYGQITLGKAISGCSEVYSPKQSG  293
             + LAF T+ + ++M+ IF +   + DKW+ KRG+ T GQ+ L+KAI     +Y+  +S 
Sbjct  246  LHYLAFYTGKNKQQMERIFLNYNNLTDKWESKRGNTTWGQLELDKAIKNQKTIYT--KSI  303

Query  294  NSYNINLKSRKNWAQllnerrkkeleklkeeWLISGGKGKQPSVISPIGCAIILKEFFRF  353
            + +N+  ++ K+  QLLN+    E  K+ E+W+  G +G++P+ ISPI CA IL+E + F
Sbjct  304  DEFNVIPQGSKDVKQLLNQLGHEERTKMEENWIEEGKRGRKPTTISPIKCAYILNEHLTF  363

Query  354  CLFNMNENTRLAMYLEEDGIWTQNETYIRRFIGFLEPTLNANKASDVIYHLWKGAEVKEK  413
             LF+ +ENT+LAMY  ++GI TQN T I+R I++LEP  N+NKA +VIYHL +  ++KEK
Sbjct  364  ILFDDEENTKLAMYQFDEGIYTQNTTIIKRVISYLEPKHNSNKADEVIYHLTNMVDIKEK  423

Query  414  TVSKYLIPVKNGVFNLKTKKLEAFTPDYVFTSKIATPYVANPPKQNINGWDVHTWLDEIA  473
            T S YLIPVKNGVFN KTK+LE+FTPDY+FT+KI+T Y +N  + N+NGWD + WL EIA
Sbjct  424  TNSPYLIPVKNGVFNRKTKQLESFTPDYIFTTKISTKYNPNVVRPNLNGWDFDHWLYEIA  483

Query  474  CGDEQITSLLWQVISASLNGNYSRKSSIWLLGDGNNGKGTFQQLLRNLIGNSNIATLKLP  533
            C+D +I +LLW+VI+ S+NGNY+RK +I ++GDGNNGKGTFQ+L+ NL+G  N+A+LK+ 
Sbjct  484  CADKEIVTLLWEVINDSMNGNYTRKKAIFFVGDGNNGKGTFQELISNLVGYKNVASLKVN  543

Query  534  QFQERFSLSILEEKVCCIGDDVPAGVYIDDSSNFNSVVTGDEIMVEQKNKHPYSANFHMT  593
            +F++ F LS+LE K   IGDDVP G+ I+DSSNF+SVVTGD ++V+ KNK+PY ++F+ T
Sbjct  544  EFDHEFKLSVLEGKAVVIGDDVPVGINIEDSSNFKSVVTGDSVLVNVKNKQPYRTEFRCT  603

Query  594  VIQSTNGMPKMRNKTDGTYRRFIIVPFKANLKGGKDNWKIKDEYIQNKEVLQYILFHAIN  653
            VIQSTNGMPK  +KT+ T RR++IVPF+A+++++++N  IK+ Y+++++VL+Y+L+ AIN
Sbjct  604  VIQSTNGMPKFTDKTGETNRRLLIVPFNADFNDSNENVDIKEKYLKDNHVLEYVLYKAIN  663

Query  654  MDFERFVEPDVSKKIMEEYKLDNDPILDYYERIFKEYKSTRIPLYVVYEFYKYFCESNN-  712
            ++F+RF  P+VSKK++E YK DND++ D+    F + +  ++P  VVY  Y+ FCE N  
Sbjct  664  LEFDRFTIPQVSKKMLEIYKQDNDSVYDFKIEEFDQWNIQKVPKKVVYYRYRAFCEENGY  723

Query  713  LKPVGDRSFYKRFGEILSEEGWEKG  737
            +  ++DR+FY+RF   L+ E W+ +
Sbjct  724  MGKMSDRTFYRRFEKYLGKE-WNTD  747

12) M637_08975 in NC_021824


> NC_017333_P1|9|G9|387601765|YP_005733286.1|Staphylococcus_aureus_subsp._aureus_ST398|+|5092..7455|-|SAPIG0476|putative 
primase
Length=787

 Score =  457 bits (1720),  Expect = 2e-129, Method: Compositional matrix adjust.
 Identities = 312/745 (42%), Positives = 508/745 (69%), Gaps = 24/745 (3%)

Query  4    QIPDELKKLKQWCAFQLVWDEERGKNKKIPMNANTGAY-GNSVDERTWADFETALASLE-  61
            +IP+ELK + +W   +  W+E + +  K+P + N  +Y +++ + +TW DFE+     E 
Sbjct  16   EIPQELKLVPNWVLWRAEWNEKQQNYGKVPYSIN--GYRASTTNKKTWCDFESVSIEYEV  73

Query  62   KYHFDGLGFYFK-APYFGVdiddikddiqdYLYGNTENIAGEFIQTLA--SYTEYSVSGT  118
              ++ G+GF +  +  F     D          ++  +I +E+   +   +Y E S SGT
Sbjct  74   DEQYSGIGFVLSDGNNFVCLDIDNAI-------DEKGQINSELALKMMRLTYCEKSPSGT  126

Query  119  GIHIIAKGDFPEGGRRKG---NIEMYPDGRFFVMTGQVIDNYRQVNEATSAIQYLHTKYI  175
            G+H + KG +P+  ++K    +IE+Y  +RF  +TG  I++  ++ +    ++ L   Y+
Sbjct  127  GLHCFFKGKLPDNRKKKRTDLDIELYDSARFMTVTGCTIGQ-NDICDNQEVLNTLVDEYF  185

Query  176  -GTIENTSLTKHQNSSN-DLSESEILEKAYNSQNGPYFKTLYEGNWEAYYASQSDADLAF  233
               +    + ++++++N +LS+ +I++   +S++   +K L +G  E+Y+ S S+A  ++
Sbjct  186  KENLPVNDVVREESNTNMQLSDEDIINIMMKSKQKDKIKDLLQGTYESYFESSSEAVQSL  245

Query  234  ANMLAFWTAADYDKMDTIFRDSGLMRDKWDQKRGQNTYGQITLGKAISGCSEVYSPKQSG  293
             + LAF T+ + ++M+ IF +   + DKW+ KRG+ T GQ+ L+KAI     +Y+  +S 
Sbjct  246  LHYLAFYTGKNKQQMERIFLNYNNLTDKWESKRGNTTWGQLELDKAIKNQKTIYT--KSI  303

Query  294  NSYNINLKSRKNWAQllnerrkkeleklkeeWLISGGKGKQPSVISPIGCAIILKEFFRF  353
            + +N+  ++ K+  QLLN+    E  K+ E+W+  G +G++P+ ISPI CA IL+E + F
Sbjct  304  DEFNVIPQGSKDVKQLLNQLGHEERTKMEENWIEEGKRGRKPTTISPIKCAYILNEHLTF  363

Query  354  CLFNMNENTRLAMYLEEDGIWTQNETYIRRFIGFLEPTLNANKASDVIYHLWKGAEVKEK  413
             LF+ +ENT+LAMY  ++GI TQN T I+R I++LEP  N+NKA +VIYHL +  ++KEK
Sbjct  364  ILFDDEENTKLAMYQFDEGIYTQNTTIIKRVISYLEPKHNSNKADEVIYHLTNMVDIKEK  423

Query  414  TVSKYLIPVKNGVFNLKTKKLEAFTPDYVFTSKIATPYVANPPKQNINGWDVHTWLDEIA  473
            T S YLIPVKNGVFN KTK+LE+FTPDY+FT+KI+T Y +N  + N+NGWD + WL EIA
Sbjct  424  TNSPYLIPVKNGVFNRKTKQLESFTPDYIFTTKISTKYNPNVVRPNLNGWDFDHWLYEIA  483

Query  474  CGDEQITSLLWQVISASLNGNYSRKSSIWLLGDGNNGKGTFQQLLRNLIGNSNIATLKLP  533
            C+D +I +LLW+VI+ S+NGNY+RK +I ++GDGNNGKGTFQ+L+ NL+G  N+A+LK+ 
Sbjct  484  CADKEIVTLLWEVINDSMNGNYTRKKAIFFVGDGNNGKGTFQELISNLVGYKNVASLKVN  543

Query  534  QFQERFSLSILEEKVCCIGDDVPAGVYIDDSSNFNSVVTGDEIMVEQKNKHPYSANFHMT  593
            +F++ F LS+LE K   IGDDVP G+ I+DSSNF+SVVTGD ++V+ KNK+PY ++F+ T
Sbjct  544  EFDHEFKLSVLEGKAVVIGDDVPVGINIEDSSNFKSVVTGDSVLVNVKNKQPYRTEFRCT  603

Query  594  VIQSTNGMPKMRNKTDGTYRRFIIVPFKANLKGGKDNWKIKDEYIQNKEVLQYILFHAIN  653
            VIQSTNGMPK  +KT+ T RR++IVPF+A+++++++N  IK+ Y+++++VL+Y+L+ AIN
Sbjct  604  VIQSTNGMPKFTDKTGETNRRLLIVPFNADFNDSNENVDIKEKYLKDNHVLEYVLYKAIN  663

Query  654  MDFERFVEPDVSKKIMEEYKLDNDPILDYYERIFKEYKSTRIPLYVVYEFYKYFCESNN-  712
            ++F+RF  P+VSKK++E YK DND++ D+    F + +  ++P  VVY  Y+ FCE N  
Sbjct  664  LEFDRFTIPQVSKKMLEIYKQDNDSVYDFKIEEFDQWNIQKVPKKVVYYRYRAFCEENGY  723

Query  713  LKPVGDRSFYKRFGEILSEEGWEKG  737
            +  ++DR+FY+RF   L+ E W+ +
Sbjct  724  MGKMSDRTFYRRFEKYLGKE-WNTD  747

13) SAT0131_00863 in NC_017347


> NC_017333_P1|9|G9|387601765|YP_005733286.1|Staphylococcus_aureus_subsp._aureus_ST398|+|5092..7455|-|SAPIG0476|putative 
primase
Length=787

 Score =  434 bits (1633),  Expect = 1e-122, Method: Compositional matrix adjust.
 Identities = 312/772 (41%), Positives = 494/772 (64%), Gaps = 58/772 (7%)

Query  1    MAIKEKDKILEVNSLEIPDELIELPQWVLWRAEWNEKQQQYSKIPYSYAGYKANSTNSDT  60
            MAIK KD+I+ V+ LEIP+EL  +P+WVLWRAEWNEKQQ+Y+K+PYS  GY+A++TN  T
Sbjct  1    MAIKKKDRIIGVKELEIPQELKLVPNWVLWRAEWNEKQQNYGKVPYSINGYRASTTNKKT  60

Query  61   WTIFDAINSIYEQNDRYDGIGFVISEHDNYIVLDIDNAIDESSQITSNLALDMTKMTYCE  120
            W  F++++  YE +++Y GIGFV+S+ +N++ LDIDNAIDE +QI S+LAL M ++TYCE
Sbjct  61   WCDFESVSIEYEVDEQYSGIGFVLSDGNNFVCLDIDNAIDEKGQINSELALKMMRLTYCE  120

Query  121  KSPSGTGLHCFFKGELPKERKKKRSDLDIELYDNARFMTMTGESIGQREISDDQSLLNNL  180
            KSPSGTGLHCFFKG LP +RKKKR+DLDIELYD+ARFMT+TG +IGQ +I D+Q +LN L
Sbjct  121  KSPSGTGLHCFFKGKLPDNRKKKRTDLDIELYDSARFMTVTGCTIGQNDICDNQEVLNTL  180

Query  181  VERYFKQEELPETFIGNNITNKSNLDDEDVINIMLKSKQKDKISNLLQGNYEPYFDSPSE  240
            V+ YFK++   +  + ++   + +L DED+INIM+KSKQKDKI +LLQG YE+YF+S+SE
Sbjct  181  VDEYFKENLPVNDVVREESNTNMQLSDEDIINIMMKSKQKDKIKDLLQGTYESYFESSSE  240

Query  241  AVQSLLHYLAFYTSKDKEQMERIFLNYNNLTDKWGSKRGNTTWGQLELDKAINNQSEVYV  300
            AVQSLLHYLAFYT+K+K+QMERIFLNYNNLTDKW SKRGNTTWGQLELDKAI+NQ  +Y 
Sbjct  241  AVQSLLHYLAFYTGKNKQQMERIFLNYNNLTDKWESKRGNTTWGQLELDKAIKNQKTIYT  300

Query  301  KP---------GKENPSKLI---------KKGSWWFYPNDDTNRKPKFNHTIMAKFI-CQ  341
            K+         G  +  +L+         K    W+  ++   RKP     I   +I  +
Sbjct  301  KSIDEFNVIPQGSKDVKQLLNQLGHEERTKMEENWI-EEGKRGRKPTTISPIKCAYILNE  359

Query  342  EYHIVRYPDAD-SDIYIYNTQTGIYELDKTGRKLRKIIRSLD-NLKDNSVKEVRNYIVDM  399
            +  ++ + D + + + +Y+ + GIY  + T   ++++I  L+ + + N   EV   + +M
Sbjct  360  HLTFILFDDEENTKLAMYQFDEGIYTQNTT--IIKRVISYLEPKHNSNKADEVIYHLTNM  417

Query  400  CDVRSVVNNEY-VAVKNGLVHYHTKIFRTFTPDIFVIDKLPTAYNPNAYDEFVDTTIQ--  456
             D++   N+ Y ++VKNG+ +  TK + +FTPD +   K++T YNPN     V   ++  
Sbjct  418  VDIKEKTNSPYLIPVKNGVFNRKTKQLESFTPDYIFTTKISTKYNPNV----VRPNLNGW  473

Query  457  -------KVSCNHETTIMNIYEMFAQVLYPKILIDKIIYLLGTVADNGKSTVQHMIKATF  509
                    ++C +   +  + E++ + +  +    K I+++G  ++NGK+T Q++I + +
Sbjct  474  DFDHWLYEIACADKEIVTLLWEVINDSMNGNYTRKKAIFFVGD-GNNGKGTFQELI-SNL  531

Query  510  DSGGRISSVSPQRLANNHFAGSSIYGKMANMVDDLP-NIEIEDAGNIKTAITGGYLEIEQ  568
             +   ++S+  + + +++F  S + GK   + DD+P  I+IED++N+K+ +TG+ + ++ 
Sbjct  532  VGYKNVASLKVNEF-DHEFKLSVLEGKAVVIGDDVPVGINIEDSSNFKSVVTGDSVLVNV  590

Query  569  KGKASQSVRMQTPFIIASNHYPKFKESGEQINKRLHIIPFNYSFKDDQERLSVTESTNKI  628
            K K +     +   I ++N  PKF +   + N+RL I+PFN  F+D +E + + E   K 
Sbjct  591  KNKQPYRTEFRCTVIQSTNGMPKFTDKTGETNRRLLIVPFNADFNDSNENVDIKEKYLK-  649

Query  629  YNKSAKEYVLKLAIDTLADMLQRDGSYITPNERSDKSAELFSDNNNPLSEY----LENRN  684
             ++   EYVL  AI+     L+ D  +  P + S K  E++ ++N+++ ++    ++++N
Sbjct  650  -DNHVLEYVLYKAIN-----LEFD-RFTIP-QVSKKMLEIYKQDNDSVYDFKIEEFDQWN  701

Query  685  IDFFLNNPGAETYKDYKVWCHSNFIRKPVNKDDFITLLENYYDIEWKRSVKY  736
            I+   + P    Y  Y+  C+ N     ++   F   +E+Y + EW+   K 
Sbjct  702  IQ---KVPKKVVYYRYRAFCEENGYMGKMSDRTFYRRFEKYLGKEWNTDAKC  750