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Homologs of sigC gene of NC_016783_P1

135

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) sigC
( YP_005124502.1 )

ECF-family sigma factor C

NC_016782
(Corynebacterium diphtheriae 241)

3e-70

100

2) sigC
( YP_005156991.1 )

ECF family sigma factor C

NC_016799
(Corynebacterium diphtheriae 31A)

3e-70

100

3) sigC
( YP_005135034.1 )

ECF-family sigma factor C

NC_016786
(Corynebacterium diphtheriae HC01)

3e-70

100

4) sigC
( YP_005137262.1 )

ECF-family sigma factor C

NC_016787
(Corynebacterium diphtheriae HC03)

3e-70

100

5) sigC
( YP_005139507.1 )

ECF family sigma factor C

NC_016788
(Corynebacterium diphtheriae HC04)

3e-70

100

6) sigC
( YP_005126716.1 )

ECF-family sigma factor C

NC_016783
(Corynebacterium diphtheriae INCA 402)

3e-70

100

7) sigC
( NP_938668.1 )

RNA polymerase sigma factor

NC_002935
(Corynebacterium diphtheriae NCTC13129)

3e-70

100

8) sigC
( YP_005141861.1 )

ECF-family sigma factor C

NC_016789
(Corynebacterium diphtheriae PW8)

3e-70

100

9) sigC
( YP_005144089.1 )

ECF family sigma factor C

NC_016790
(Corynebacterium diphtheriae VA01)

3e-70

100

10) sigC
( YP_005164028.1 )

ECF-family sigma factor C

NC_016802
(Corynebacterium diphtheriae HC02)

9e-70

11) sigC
( YP_005132784.1 )

ECF-family sigma factor C

NC_016785
(Corynebacterium diphtheriae CDCE 8392)

2e-69

12) sigC
( YP_005161686.1 )

ECF-family sigma factor C

NC_016801
(Corynebacterium diphtheriae C7 (beta))

3e-69

13) sigC
( YP_005159323.1 )

ECF-family sigma factor C

NC_016800
(Corynebacterium diphtheriae BH8)

5e-69

14) CE0223
( NP_736833.2 )

RNA polymerase sigma factor

NC_004369
(Corynebacterium efficiens YS-314)

7e-60

15) A605_01590
( YP_007463694.1 )

RNA polymerase sigma factor

NC_020302
(Corynebacterium halotolerans YIM 70093)

4e-59

16) sigC
( YP_006493699.1 )

RNA polymerase sigma factor

NC_018101
(Corynebacterium ulcerans 0102)

7e-58

17) sigC
( YP_005709859.1 )

ECF-family sigma factor C

NC_017317
(Corynebacterium ulcerans 809)

7e-58

18) sigC
( YP_004628859.1 )

ECF family sigma factor C

NC_015683
(Corynebacterium ulcerans BR-AD22)

7e-58

19) sigC
( YP_002833730.1 )

RNA polymerase sigma factor

NC_012590
(Corynebacterium aurimucosum ATCC 700975)

3e-57

20) sigC
( YP_006212711.1 )

RNA polymerase sigma factor

NC_017730
(Corynebacterium pseudotuberculosis 31)

1e-56

21) sigC
( YP_005695806.1 )

RNA polymerase sigma factor

NC_017308
(Corynebacterium pseudotuberculosis 1/06-A)

2e-56

22) sigC
( YP_005680447.1 )

RNA polymerase sigma factor

NC_017300
(Corynebacterium pseudotuberculosis 1002)

2e-56

23) sigC
( YP_006351770.1 )

RNA polymerase sigma factor

NC_017945
(Corynebacterium pseudotuberculosis 258)

2e-56

24) sigC
( YP_005843016.1 )

RNA polymerase sigma factor

NC_017462
(Corynebacterium pseudotuberculosis 267)

2e-56

25) sigC
( YP_005122299.1 )

RNA polymerase sigma factor

NC_016781
(Corynebacterium pseudotuberculosis 3/99-5)

2e-56

26) sigC
( YP_005302801.1 )

RNA polymerase sigma factor

NC_016932
(Corynebacterium pseudotuberculosis 316)

2e-56

27) sigC
( YP_005691705.1 )

RNA polymerase sigma factor

NC_017306
(Corynebacterium pseudotuberculosis 42/02-A)

2e-56

28) sigC
( YP_005682538.1 )

RNA polymerase sigma factor

NC_017301
(Corynebacterium pseudotuberculosis C231)

2e-56

29) sigC
( YP_006436343.1 )

RNA polymerase sigma factor

NC_018019
(Corynebacterium pseudotuberculosis Cp162)

2e-56

30) sigC
( YP_003782574.1 )

ECF family sigma factor C

NC_014329
(Corynebacterium pseudotuberculosis FRC41)

2e-56

31) sigC
( YP_005684629.1 )

RNA polymerase sigma factor

NC_017303
(Corynebacterium pseudotuberculosis I19)

2e-56

32) sigC
( YP_005374217.1 )

RNA polymerase sigma factor

NC_017031
(Corynebacterium pseudotuberculosis P54B96)

2e-56

33) sigC
( YP_005689633.1 )

RNA polymerase sigma factor

NC_017305
(Corynebacterium pseudotuberculosis PAT10)

2e-56

34) H924_01115
( YP_007529582.1 )

RNA polymerase sigma factor

NC_020506
(Corynebacterium callunae DSM 20147)

4e-54

35) Cgl0254
( NP_599507.1 )

RNA polymerase sigma factor

NC_003450
(Corynebacterium glutamicum ATCC 13032)

1e-52

36) SigC
( YP_007559510.1 )

RNA polymerase sigma factor

NC_020519
(Corynebacterium glutamicum ATCC 13032)

1e-52

37) sigC
( YP_224554.1 )

RNA polymerase sigma factor

NC_006958
(Corynebacterium glutamicum ATCC 13032)

1e-52

38) cgp_0309
( YP_008400400.1 )

RNA polymerase sigma factor, ECF-family

NC_022040
(Corynebacterium glutamicum MB001)

1e-52

39) cgR_0331
( YP_001137197.1 )

RNA polymerase sigma factor

NC_009342
(Corynebacterium glutamicum R)

2e-52

40) C624_01615
( YP_008065042.1 )

RNA polymerase sigma factor

NC_021351
(Corynebacterium glutamicum SCgG1)

2e-52

41) C629_01615
( YP_008068065.1 )

RNA polymerase sigma factor

NC_021352
(Corynebacterium glutamicum SCgG2)

2e-52

42) sigC
( YP_251795.1 )

RNA polymerase sigma factor

NC_007164
(Corynebacterium jeikeium K411)

2e-52

43) CARG_00530
( YP_008477896.1 )

hypothetical protein

NC_022198
(Corynebacterium argentoratense DSM 44202)

4e-51

44) B841_01470
( YP_008370264.1 )

RNA polymerase sigma factor

NC_021915
(Corynebacterium maris DSM 45190)

1e-50

45) sigC
( YP_007417650.1 )

ECF-family sigma factor C

NC_020230
(Corynebacterium urealyticum DSM 7111)

2e-49

46) sigC
( YP_001801278.1 )

RNA polymerase sigma factor

NC_010545
(Corynebacterium urealyticum DSM 7109)

3e-49

47) sigC
( YP_002905519.1 )

RNA polymerase sigma factor

NC_012704
(Corynebacterium kroppenstedtii DSM 44385)

3e-48

48) sigC
( YP_004606560.1 )

ECF-family sigma factor C

NC_015673
(Corynebacterium resistens DSM 45100)

1e-45

49) sigC_1
( YP_007366875.1 )

RNA polymerase sigma factor, ECF subfamily, SigC_1

NC_020133
(Mycobacterium liflandii 128FXT)

8e-36

50) sigC_1
( YP_001848588.1 )

ECF subfamily RNA polymerase sigma factor

NC_010612
(Mycobacterium marinum M)

1e-35

51) sigC_1
( YP_908221.1 )

ECF subfamily RNA polymerase sigma factor

NC_008611
(Mycobacterium ulcerans Agy99)

1e-35

52) MASS_3373
( YP_008023839.1 )

RNA polymerase sigma-C factor

NC_021282
(Mycobacterium abscessus 50594)

6e-35

53) MAB_3428c
( YP_001704158.1 )

Probable RNA polymerase sigma-C factor

NC_010397
(Mycobacterium abscessus ATCC 19977)

6e-35

54) sigC
( YP_006521629.1 )

RNA polymerase sigma-C factor

NC_018150
(Mycobacterium abscessus GO 06)

6e-35

55) sam38
( YP_007040029.1 )

RNA polymerase sigma factor

NC_019673
(Saccharothrix espanaensis DSM 44229)

1e-34

56) sigC
( YP_007268755.1 )

Putative RNA polymerase sigma factor, ECF subfamily, SigC

NC_019952
(Mycobacterium canettii CIPT 140070017)

2e-34

57) sigC
( YP_004745532.1 )

putative RNA polymerase sigma factor, ECF SUBfamily, SIGC

NC_015848
(Mycobacterium canettii CIPT 140010059)

5e-34

58) sigC
( YP_007260804.1 )

Putative RNA polymerase sigma factor, ECF subfamily, SigC

NC_019950
(Mycobacterium canettii CIPT 140060008)

5e-34

59) sigC
( YP_007287988.1 )

Putative RNA polymerase sigma factor, ECF subfamily, SigC

NC_019965
(Mycobacterium canettii CIPT 140070008)

5e-34

60) sigC
( YP_007264819.1 )

Putative RNA polymerase sigma factor, ECF subfamily, SigC

NC_019951
(Mycobacterium canettii CIPT 140070010)

5e-34

61) sigC
( YP_004723751.1 )

RNA polymerase sigma factor

NC_015758
(Mycobacterium africanum GM041182)

6e-34

62) sigC
( NP_855745.1 )

RNA polymerase sigma factor SigC

NC_002945
(Mycobacterium bovis AF2122/97)

6e-34

63) sigC
( YP_978178.1 )

RNA polymerase sigma factor SigC

NC_008769
(Mycobacterium bovis BCG Pasteur 1173P2)

6e-34

64) K60_021490
( YP_007431207.1 )

RNA polymerase sigma factor SigC

NC_020245
(Mycobacterium bovis Korea 1168P)

6e-34

65) sigC
( YP_005171533.1 )

RNA polymerase sigma factor

NC_016804
(Mycobacterium bovis Mexico)

6e-34

66) sigC
( YP_002645135.1 )

RNA polymerase sigma factor SigC

NC_012207
(Mycobacterium bovis Tokyo 172)

6e-34

67) sigC
( YP_007351837.1 )

putative RNA POLYMERASE SIGMA FACTOR, ECF SUBFAMILY, SIGC

NC_020089
(Mycobacterium tuberculosis 7199-99)

6e-34

68) J112_11070
( YP_007855045.1 )

RNA polymerase sigma factor SigC

NC_021054
(Mycobacterium tuberculosis Beijing/NITR203)

6e-34

69) CCDC5079_1913
( YP_005913336.1 )

ECF subfamily RNA polymerase sigma factor

NC_017523
(Mycobacterium tuberculosis CCDC5079)

6e-34

70) sigC
( YP_008007026.1 )

RNA polymerase sigma factor SigC

NC_021251
(Mycobacterium tuberculosis CCDC5079)

6e-34

71) CCDC5180_1889
( YP_005909721.1 )

ECF subfamily RNA polymerase sigma factor

NC_017522
(Mycobacterium tuberculosis CCDC5180)

6e-34

72) sigC
( YP_005917147.1 )

RNA polymerase sigma factor SigC

NC_017524
(Mycobacterium tuberculosis CTRI-2)

6e-34

73) M943_10725
( YP_008226166.1 )

RNA polymerase sigma factor SigC

NC_021740
(Mycobacterium tuberculosis EAI5)

6e-34

74) J114_11075
( YP_007965980.1 )

RNA polymerase sigma factor SigC

NC_021194
(Mycobacterium tuberculosis EAI5/NITR206)

6e-34

75) sigC
( YP_007610754.1 )

RNA polymerase sigma factor

NC_020559
(Mycobacterium tuberculosis Erdman (ATCC35801))

6e-34

76) sigC
( YP_001283406.1 )

RNA polymerase sigma factor SigC

NC_009525
(Mycobacterium tuberculosis H37Ra)

6e-34

77) sigC
( NP_216585.1 )

RNA polymerase sigma factor, ECF subfamily, SigC

NC_000962
(Mycobacterium tuberculosis H37Rv)

6e-34

78) RVBD_2069
( YP_006515482.1 )

sigma-70 family RNA polymerase sigma factor

NC_018143
(Mycobacterium tuberculosis H37Rv)

6e-34

79) TBXG_001897
( YP_006473383.1 )

RNA polymerase sigma factor sigC

NC_018078
(Mycobacterium tuberculosis KZN 605)

6e-34

80) MRGA327_12740
( YP_005360687.1 )

RNA polymerase sigma factor SigC

NC_017026
(Mycobacterium tuberculosis RGTB327)

6e-34

81) MRGA423_12885
( YP_005923291.1 )

RNA polymerase sigma factor SigC

NC_017528
(Mycobacterium tuberculosis RGTB423)

6e-34

82) sigC
( YP_005308348.1 )

hypothetical protein

NC_016934
(Mycobacterium tuberculosis UT205)

6e-34

83) sigC
( YP_001108716.1 )

RNA polymerase sigma factor

NC_009142
(Saccharopolyspora erythraea NRRL 2338)

2e-33

84) GPOL_c36330
( YP_005284011.1 )

RNA polymerase sigma factor

NC_016906
(Gordonia polyisoprenivorans VH2)

8e-33

85) Amir_2773
( YP_003100552.1 )

ECF subfamily RNA polymerase sigma-24 subunit

NC_013093
(Actinosynnema mirum DSM 43827)

3e-32

86) Mycch_1876
( YP_006452342.1 )

RNA polymerase sigma factor, sigma-70 family

NC_018027
(Mycobacterium chubuense NBB4)

9e-32

87) MLBr_01448
( YP_002503653.1 )

RNA polymerase sigma factor SigC

NC_011896
(Mycobacterium leprae Br4923)

2e-31

88) ML1448
( NP_302023.1 )

RNA polymerase sigma factor SigC

NC_002677
(Mycobacterium leprae TN)

2e-31

89) O3I_034420
( YP_006811807.1 )

RNA polymerase sigma factor

NC_018681
(Nocardia brasiliensis HUJEG-1)

3e-30

90) Sros_3479
( YP_003339158.1 )

ECF subfamily RNA polymerase sigma-24 subunit

NC_013595
(Streptosporangium roseum DSM 43021)

9e-30

91) Mycch_5904
( YP_006442838.1 )

DNA-directed RNA polymerase specialized sigma subunit, sigma24

NC_018022
(Mycobacterium chubuense NBB4)

2e-28

92) KSE_70250
( YP_004908739.1 )

putative RNA polymerase ECF subfamily sigma factor

NC_016109
(Kitasatospora setae KM-6054)

3e-26

93) RAM_33490
( YP_005534628.1 )

ECF subfamily RNA polymerase sigma-70 factor

NC_017186
(Amycolatopsis mediterranei S699)

1e-25

94) SCAB_41571
( YP_003489778.1 )

sigma factor

NC_013929
(Streptomyces scabiei 87.22)

2e-25

95) J113_14280
( YP_007961954.1 )

RNA polymerase sigma factor sigC

NC_021193
(Mycobacterium tuberculosis CAS/NITR204)

2e-25

96) MycrhN_3035
( YP_005000790.1 )

sigma-70 family RNA polymerase sigma factor

NC_016604
(Mycobacterium rhodesiae NBB3)

6e-25

97) rpoE
( YP_008462767.1 )

RNA polymerase sigma-70 factor, ECF subfamily

NC_022116
(Amycolatopsis mediterranei RB)

8e-25

98) rpoE
( YP_006552916.1 )

RNA polymerase sigma-70 factor, ECF subfamily

NC_018266
(Amycolatopsis mediterranei S699)

8e-25

99) rpoE
( YP_003768662.1 )

ECF subfamily RNA polymerase sigma-70 factor

NC_014318
(Amycolatopsis mediterranei U32)

8e-25

100) rpoE
( YP_008462768.1 )

RNA polymerase sigma-70 factor, ECF subfamily

NC_022116
(Amycolatopsis mediterranei RB)

4e-24

101) RAM_33495
( YP_005534629.1 )

ECF subfamily RNA polymerase sigma-70 factor

NC_017186
(Amycolatopsis mediterranei S699)

4e-24

102) rpoE
( YP_006552917.1 )

RNA polymerase sigma-70 factor, ECF subfamily

NC_018266
(Amycolatopsis mediterranei S699)

4e-24

103) rpoE
( YP_003768663.1 )

ECF subfamily RNA polymerase sigma-70 factor

NC_014318
(Amycolatopsis mediterranei U32)

4e-24

104) sigC
( YP_006364224.1 )

RNA polymerase sigma-C factor

NC_017955
(Modestobacter marinus BC501)

1e-23

105) rpoE
( YP_008014566.1 )

RNA polymerase sigma-70 factor, ECF subfamily

NC_021252
(Amycolatopsis orientalis HCCB10007)

8e-23

106) L083_4562
( YP_007952552.1 )

sigma-70 region 4 domain-containing protein

NC_021191
(Actinoplanes sp. N902-109)

9e-23

107) Micau_1194
( YP_003834332.1 )

sigma-70 family RNA polymerase

NC_014391
(Micromonospora aurantiaca ATCC 27029)

2e-22

108) ML5_1459
( YP_004081148.1 )

ECF subfamily RNA polymerase sigma-24 subunit

NC_014815
(Micromonospora sp. L5)

3e-22

109) sig10
( YP_007522450.1 )

ECF subfamily RNA polymerase sigma factor

NC_020504
(Streptomyces davawensis JCM 4913)

6e-22

110) Tpau_3772
( YP_003648689.1 )

ECF subfamily RNA polymerase sigma-24 subunit

NC_014158
(Tsukamurella paurometabola DSM 20162)

3e-21

111) Strvi_5372
( YP_004815179.1 )

ECF subfamily RNA polymerase sigma-24 subunit

NC_015957
(Streptomyces violaceusniger Tu 4113)

6e-21

112) SCM2.17c
( NP_625164.1 )

ECF family RNA polymerase sigma factor

NC_003888
(Streptomyces coelicolor A3(2))

2e-20

113) B446_03440
( YP_008384331.1 )

ECF subfamily RNA polymerase sigma factor

NC_021985
(Streptomyces collinus Tu 365)

2e-20

114) sigC
( YP_006264154.1 )

RNA polymerase sigma-E factor

NC_017803
(Actinoplanes sp. SE50/110)

1e-19

115) sigC2
( YP_005328054.1 )

RNA polymerase sigma-C factor

NC_016943
(Blastococcus saxobsidens DD2)

2e-19

116) Gobs_1273
( YP_003408385.1 )

ECF subfamily RNA polymerase sigma-24 subunit

NC_013757
(Geodermatophilus obscurus DSM 43160)

6e-19

117) sig9
( YP_004960558.1 )

ECF subfamily RNA polymerase sigma factor

NC_016582
(Streptomyces bingchenggensis BCW-1)

3e-18

118) SHJG_8323
( YP_006249461.1 )

RNA polymerase ECF-subfamily sigma factor

NC_017765
(Streptomyces hygroscopicus 5008)

6e-18

119) SHJGH_8084
( YP_007697080.1 )

RNA polymerase ECF-subfamily sigma factor

NC_020895
(Streptomyces hygroscopicus TL01)

6e-18

120) SCM2.19c
( NP_625166.1 )

ECF family RNA polymerase sigma factor

NC_003888
(Streptomyces coelicolor A3(2))

1e-17

121) sigC
( YP_005327706.1 )

RNA polymerase sigma-C factor

NC_016943
(Blastococcus saxobsidens DD2)

1e-17

122) sigC
( YP_007565950.1 )

RNA polymerase ECF subfamily sigma factor SigC

NC_020520
(Ilumatobacter coccineum YM16-304)

8e-16

123) sigC
( YP_007949292.1 )

RNA polymerase, sigma-24 subunit, ecf subfamily protein

NC_021191
(Actinoplanes sp. N902-109)

9e-16

124) rpoE
( YP_008459292.1 )

RNA polymerase sigma-70 factor, ECF subfamily

NC_022116
(Amycolatopsis mediterranei RB)

2e-15

125) RAM_15210
( YP_005530987.1 )

ECF subfamily RNA polymerase sigma-70 factor

NC_017186
(Amycolatopsis mediterranei S699)

2e-15

126) rpoE
( YP_006549440.1 )

RNA polymerase sigma-70 factor, ECF subfamily

NC_018266
(Amycolatopsis mediterranei S699)

2e-15

127) rpoE
( YP_003765186.1 )

ECF subfamily RNA polymerase sigma-70 factor

NC_014318
(Amycolatopsis mediterranei U32)

2e-15

128) VAB18032_06790
( YP_004403082.1 )

sigma-70 factor

NC_015434
(Verrucosispora maris AB-18-032)

4e-15

129) sig10
( NP_822073.1 )

ECF subfamily RNA polymerase sigma factor

NC_003155
(Streptomyces avermitilis MA-4680)

2e-14

130) Psed_5845
( YP_004335822.1 )

ECF subfamily RNA polymerase sigma-24 subunit

NC_015312
(Pseudonocardia dioxanivorans CB1190)

7e-14

131) sigC
( YP_906143.1 )

RNA polymerase sigma factor SigC

NC_008611
(Mycobacterium ulcerans Agy99)

2e-13

132) sigC
( YP_007369047.1 )

RNA polymerase sigma factor, SigC

NC_020133
(Mycobacterium liflandii 128FXT)

2e-13

133) sigC
( YP_001851343.1 )

RNA polymerase sigma factor SigC

NC_010612
(Mycobacterium marinum M)

2e-13

134) Micau_3015
( YP_003836122.1 )

sigma-70 family RNA polymerase

NC_014391
(Micromonospora aurantiaca ATCC 27029)

3e-13

135) ML5_5372
( YP_004084994.1 )

ECF subfamily RNA polymerase sigma-24 subunit

NC_014815
(Micromonospora sp. L5)

7e-13

• Sequence Alignments

1) sigC in NC_016782


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  257 bits (962),  Expect = 3e-70, Method: Compositional matrix adjust.
 Identities = 161/161 (100%), Positives = 161/161 (100%), Gaps = 0/161 (0%)

Query  1    MNMKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETY  60
            MNMKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETY
Sbjct  1    MNMKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETY  60

Query  61   LRVMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQCDGTTSSLWAEW  120
            LRVMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQCDGTTSSLWAEW
Sbjct  61   LRVMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQCDGTTSSLWAEW  120

Query  121  VDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGT  161
            VDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGT
Sbjct  121  VDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGT  161

2) sigC in NC_016799


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  257 bits (962),  Expect = 3e-70, Method: Compositional matrix adjust.
 Identities = 161/161 (100%), Positives = 161/161 (100%), Gaps = 0/161 (0%)

Query  1    MNMKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETY  60
            MNMKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETY
Sbjct  1    MNMKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETY  60

Query  61   LRVMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQCDGTTSSLWAEW  120
            LRVMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQCDGTTSSLWAEW
Sbjct  61   LRVMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQCDGTTSSLWAEW  120

Query  121  VDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGT  161
            VDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGT
Sbjct  121  VDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGT  161

3) sigC in NC_016786


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  257 bits (962),  Expect = 3e-70, Method: Compositional matrix adjust.
 Identities = 161/161 (100%), Positives = 161/161 (100%), Gaps = 0/161 (0%)

Query  1    MNMKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETY  60
            MNMKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETY
Sbjct  1    MNMKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETY  60

Query  61   LRVMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQCDGTTSSLWAEW  120
            LRVMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQCDGTTSSLWAEW
Sbjct  61   LRVMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQCDGTTSSLWAEW  120

Query  121  VDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGT  161
            VDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGT
Sbjct  121  VDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGT  161

4) sigC in NC_016787


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  257 bits (962),  Expect = 3e-70, Method: Compositional matrix adjust.
 Identities = 161/161 (100%), Positives = 161/161 (100%), Gaps = 0/161 (0%)

Query  1    MNMKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETY  60
            MNMKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETY
Sbjct  1    MNMKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETY  60

Query  61   LRVMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQCDGTTSSLWAEW  120
            LRVMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQCDGTTSSLWAEW
Sbjct  61   LRVMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQCDGTTSSLWAEW  120

Query  121  VDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGT  161
            VDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGT
Sbjct  121  VDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGT  161

5) sigC in NC_016788


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  257 bits (962),  Expect = 3e-70, Method: Compositional matrix adjust.
 Identities = 161/161 (100%), Positives = 161/161 (100%), Gaps = 0/161 (0%)

Query  1    MNMKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETY  60
            MNMKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETY
Sbjct  1    MNMKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETY  60

Query  61   LRVMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQCDGTTSSLWAEW  120
            LRVMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQCDGTTSSLWAEW
Sbjct  61   LRVMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQCDGTTSSLWAEW  120

Query  121  VDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGT  161
            VDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGT
Sbjct  121  VDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGT  161

6) sigC in NC_016783


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  257 bits (962),  Expect = 3e-70, Method: Compositional matrix adjust.
 Identities = 161/161 (100%), Positives = 161/161 (100%), Gaps = 0/161 (0%)

Query  1    MNMKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETY  60
            MNMKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETY
Sbjct  1    MNMKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETY  60

Query  61   LRVMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQCDGTTSSLWAEW  120
            LRVMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQCDGTTSSLWAEW
Sbjct  61   LRVMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQCDGTTSSLWAEW  120

Query  121  VDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGT  161
            VDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGT
Sbjct  121  VDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGT  161

7) sigC in NC_002935


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  257 bits (962),  Expect = 3e-70, Method: Compositional matrix adjust.
 Identities = 161/161 (100%), Positives = 161/161 (100%), Gaps = 0/161 (0%)

Query  1    MNMKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETY  60
            MNMKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETY
Sbjct  1    MNMKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETY  60

Query  61   LRVMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQCDGTTSSLWAEW  120
            LRVMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQCDGTTSSLWAEW
Sbjct  61   LRVMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQCDGTTSSLWAEW  120

Query  121  VDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGT  161
            VDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGT
Sbjct  121  VDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGT  161

8) sigC in NC_016789


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  257 bits (962),  Expect = 3e-70, Method: Compositional matrix adjust.
 Identities = 161/161 (100%), Positives = 161/161 (100%), Gaps = 0/161 (0%)

Query  1    MNMKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETY  60
            MNMKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETY
Sbjct  1    MNMKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETY  60

Query  61   LRVMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQCDGTTSSLWAEW  120
            LRVMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQCDGTTSSLWAEW
Sbjct  61   LRVMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQCDGTTSSLWAEW  120

Query  121  VDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGT  161
            VDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGT
Sbjct  121  VDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGT  161

9) sigC in NC_016790


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  257 bits (962),  Expect = 3e-70, Method: Compositional matrix adjust.
 Identities = 161/161 (100%), Positives = 161/161 (100%), Gaps = 0/161 (0%)

Query  1    MNMKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETY  60
            MNMKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETY
Sbjct  1    MNMKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETY  60

Query  61   LRVMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQCDGTTSSLWAEW  120
            LRVMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQCDGTTSSLWAEW
Sbjct  61   LRVMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQCDGTTSSLWAEW  120

Query  121  VDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGT  161
            VDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGT
Sbjct  121  VDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGT  161

10) sigC in NC_016802


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  256 bits (956),  Expect = 9e-70, Method: Compositional matrix adjust.
 Identities = 160/161 (99%), Positives = 161/161 (100%), Gaps = 0/161 (0%)

Query  1    MNMKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETY  60
            MNMKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETY
Sbjct  1    MNMKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETY  60

Query  61   LRVMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQCDGTTSSLWAEW  120
            LRVMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQCDGTTSSLWAEW
Sbjct  61   LRVMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQCDGTTSSLWAEW  120

Query  121  VDVRILIDALPAERREALILTQVLGFSYEEAAKIADVRIGT  161
            VDVR+LIDALPAERREALILTQVLGFSYEEAAKIADVRIGT
Sbjct  121  VDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGT  161

11) sigC in NC_016785


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  255 bits (951),  Expect = 2e-69, Method: Compositional matrix adjust.
 Identities = 158/161 (99%), Positives = 161/161 (100%), Gaps = 0/161 (0%)

Query  1    MNMKPSERDDDYVTALALKAGRGDRAALTTFIRATQTDVWRLLAHLGGTDIADDLTQETY  60
            MNMKPSERDDDYVTALALKAGRGDRAALT+FIRATQTDVWRLLAHLGGTDIADDLTQETY
Sbjct  1    MNMKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETY  60

Query  61   LRVMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQCDATTSSLWAEW  120
            LRVMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQCD+TTSSLWAEW
Sbjct  61   LRVMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQCDGTTSSLWAEW  120

Query  121  VDVRILIDALPAERREALILTQVLGFSYEEAAKIADVRIGT  161
            VDVR+LIDALPAERREALILTQVLGFSYEEAAKIADVRIGT
Sbjct  121  VDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGT  161

12) sigC in NC_016801


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  254 bits (949),  Expect = 3e-69, Method: Compositional matrix adjust.
 Identities = 160/161 (99%), Positives = 160/161 (99%), Gaps = 0/161 (0%)

Query  1    MNMKPSERDDDYVTALALKAGCGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETY  60
            MNMKPSERDDDYVTALALKAG GDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETY
Sbjct  1    MNMKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETY  60

Query  61   LRVMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQCDGTTSSLWAEW  120
            LRVMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQCDGTTSSLWAEW
Sbjct  61   LRVMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQCDGTTSSLWAEW  120

Query  121  VDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGT  161
            VDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGT
Sbjct  121  VDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGT  161

13) sigC in NC_016800


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  253 bits (946),  Expect = 5e-69, Method: Compositional matrix adjust.
 Identities = 159/161 (99%), Positives = 159/161 (99%), Gaps = 0/161 (0%)

Query  1    MNMKPSERDDDYVTALALKAGCGDRAALTAFIRATQPDVWRLLAHLGGTDIADDLTQETY  60
            MNMKPSERDDDYVTALALKAG GDRAALTAFIRATQ DVWRLLAHLGGTDIADDLTQETY
Sbjct  1    MNMKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETY  60

Query  61   LRVMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQCDGTTSSLWAEW  120
            LRVMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQCDGTTSSLWAEW
Sbjct  61   LRVMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQCDGTTSSLWAEW  120

Query  121  VDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGT  161
            VDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGT
Sbjct  121  VDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGT  161

14) CE0223 in NC_004369


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  223 bits (830),  Expect = 7e-60, Method: Compositional matrix adjust.
 Identities = 135/167 (81%), Positives = 149/167 (90%), Gaps = 3/167 (1%)

Query  1    MKSPERNDAHVTELALAAGRGDRDALTEFIRETQDDVWRLLAHLGGREIADDLTQETYLR  60
            MK++ER+D  VT LAL AGRGDR ALT FIR TQ DVWRLLAHLGG +IADDLTQETYLR
Sbjct  3    MKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLR  62

Query  61   VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSHVEYEDTGVTDATNSTIWSE  120
            VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKS  E E+    D+T S++W+E
Sbjct  63   VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQ---CDGTTSSLWAE  119

Query  121  WIDVRTLIDALPAERREALILTQVLGYTYEEAAKIAGVRVGTIRSRV  167
            W+DVR LIDALPAERREALILTQVLG++YEEAAKIA+VR+GTIRSRV
Sbjct  120  WVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGTIRSRV  166

15) A605_01590 in NC_020302


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  220 bits (821),  Expect = 4e-59, Method: Compositional matrix adjust.
 Identities = 133/168 (80%), Positives = 150/168 (90%), Gaps = 6/168 (3%)

Query  4    PPERDDQRVTELALAAGRGDRTALTEFIRATQGDVWRLLAHLGGRDVADDLTQETYLRVM  63
            P+ERDD+ VT LAL AGRGDR+ALT FIRATQ DVWRLLAHLGG D+ADDLTQETYLRVM
Sbjct  5    PSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLRVM  64

Query  64   GALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSATEYEDAAATTPSEGANATSWS  123
            +ALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSA+E E+       +G+ ++ W+
Sbjct  65   SALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQ------CDGTTSSLWA  118

Query  124  EWIDVRTLIDALPDERREALILTQVLGYTYEEAAKIAGVRVGTIRSRV  171
            EW+DVR LIDALP ERREALILTQVLG++YEEAAKIA+VR+GTIRSRV
Sbjct  119  EWVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGTIRSRV  166

16) sigC in NC_018101


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  216 bits (805),  Expect = 7e-58, Method: Compositional matrix adjust.
 Identities = 135/167 (81%), Positives = 149/167 (90%), Gaps = 6/167 (3%)

Query  1    MKNSERDDR-VTQLALAAGRGDKTALTEFIRETQNDVWRLLAHLGGSEIADDLTQETYLR  59
            MK SERDD  VT LAL AGRGD++ALT FIR TQ DVWRLLAHLGG++IADDLTQETYLR
Sbjct  3    MKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLR  62

Query  60   VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSSAEVEDLDPAVLSTNGENTW  119
            VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKS+AEVE+ D +       + W
Sbjct  63   VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQCDGT-----TSSLW  117

Query  120  SDWIDVRLLIDALPAERREALILTQVLGYSYEEAAKIANVRIGTIRS  166
            ++W+DVR+LIDALPAERREALILTQVLG+SYEEAAKIA+VRIGTIRS
Sbjct  118  AEWVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGTIRS  164

17) sigC in NC_017317


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  216 bits (805),  Expect = 7e-58, Method: Compositional matrix adjust.
 Identities = 135/167 (81%), Positives = 149/167 (90%), Gaps = 6/167 (3%)

Query  1    MKNSERDDR-VTQLALAAGRGDKTALTEFIRETQNDVWRLLAHLGGSEIADDLTQETYLR  59
            MK SERDD  VT LAL AGRGD++ALT FIR TQ DVWRLLAHLGG++IADDLTQETYLR
Sbjct  3    MKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLR  62

Query  60   VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSSAEVEDLDPAVLSTNGENTW  119
            VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKS+AEVE+ D +       + W
Sbjct  63   VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQCDGT-----TSSLW  117

Query  120  SDWIDVRLLIDALPAERREALILTQVLGYSYEEAAKIANVRIGTIRS  166
            ++W+DVR+LIDALPAERREALILTQVLG+SYEEAAKIA+VRIGTIRS
Sbjct  118  AEWVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGTIRS  164

18) sigC in NC_015683


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  216 bits (805),  Expect = 7e-58, Method: Compositional matrix adjust.
 Identities = 135/167 (81%), Positives = 149/167 (90%), Gaps = 6/167 (3%)

Query  1    MKNSERDDR-VTQLALAAGRGDKTALTEFIRETQNDVWRLLAHLGGSEIADDLTQETYLR  59
            MK SERDD  VT LAL AGRGD++ALT FIR TQ DVWRLLAHLGG++IADDLTQETYLR
Sbjct  3    MKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLR  62

Query  60   VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSSAEVEDLDPAVLSTNGENTW  119
            VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKS+AEVE+ D +       + W
Sbjct  63   VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQCDGT-----TSSLW  117

Query  120  SDWIDVRLLIDALPAERREALILTQVLGYSYEEAAKIANVRIGTIRS  166
            ++W+DVR+LIDALPAERREALILTQVLG+SYEEAAKIA+VRIGTIRS
Sbjct  118  AEWVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGTIRS  164

19) sigC in NC_012590


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  214 bits (797),  Expect = 3e-57, Method: Compositional matrix adjust.
 Identities = 131/169 (78%), Positives = 148/169 (88%), Gaps = 5/169 (2%)

Query  2    KRHSERDDARVTDLALKAGRGDRAALTEFIKSTQDDVWRLLAHLGGPDIADDLTQETYLR  61
             + SERDD  VT LALKAGRGDRAALT FI++TQ DVWRLLAHLGG DIADDLTQETYLR
Sbjct  3    MKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLR  62

Query  62   VIGALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSATEYEDAAALTTTPESSGTW  121
            V++ALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSA+E E+  +      +S+ W
Sbjct  63   VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQCDG-----TTSSLW  117

Query  122  SEWIDARALIDALPEDRREALILTQVLGYTYEEAAKIAGVRVGTIRSRV  170
            +EW+D R LIDALP +RREALILTQVLG++YEEAAKIA+VR+GTIRSRV
Sbjct  118  AEWVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGTIRSRV  166

20) sigC in NC_017730


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  212 bits (790),  Expect = 1e-56, Method: Compositional matrix adjust.
 Identities = 130/164 (80%), Positives = 147/164 (90%), Gaps = 6/164 (3%)

Query  1    MKNSERDDR-VTQLALAAGRGDKTALTEFIRETQNDVWRLLAHLGGSEIADDLTQETYLR  59
            MK SERDD  VT LAL AGRGD++ALT FIR TQ DVWRLLAHLGG++IADDLTQETYLR
Sbjct  3    MKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLR  62

Query  60   VMGALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSSAEVEDLDSAVLSTNGETTW  119
            VM+ALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKS+AEVE+ D++       + W
Sbjct  63   VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQCDGT-----TSSLW  117

Query  120  SDWIDVRLLIDALPTERREALILTQVLGYSYEEAAKIANVRIGT  163
            ++W+DVR+LIDALP+ERREALILTQVLG+SYEEAAKIA+VRIGT
Sbjct  118  AEWVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGT  161

21) sigC in NC_017300


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  212 bits (788),  Expect = 2e-56, Method: Compositional matrix adjust.
 Identities = 130/164 (80%), Positives = 146/164 (90%), Gaps = 6/164 (3%)

Query  1    MKNSERDDR-VTQLALAAGRGDKTALTEFIRETQNDVWRLLAHLGGSEIADDLTQETYLR  59
            MK SERDD  VT LAL AGRGD++ALT FIR TQ DVWRLLAHLGG++IADDLTQETYLR
Sbjct  3    MKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLR  62

Query  60   VMGALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSSAEVEDLDPAVLSTNGETTW  119
            VM+ALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKS+AEVE+ D +       + W
Sbjct  63   VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQCDGTT-----SSLW  117

Query  120  SDWIDVRLLIDALPTERREALILTQVLGYSYEEAAKIANVRIGT  163
            ++W+DVR+LIDALP+ERREALILTQVLG+SYEEAAKIA+VRIGT
Sbjct  118  AEWVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGT  161

22) sigC in NC_017308


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  212 bits (788),  Expect = 2e-56, Method: Compositional matrix adjust.
 Identities = 130/164 (80%), Positives = 146/164 (90%), Gaps = 6/164 (3%)

Query  1    MKNSERDDR-VTQLALAAGRGDKTALTEFIRETQNDVWRLLAHLGGSEIADDLTQETYLR  59
            MK SERDD  VT LAL AGRGD++ALT FIR TQ DVWRLLAHLGG++IADDLTQETYLR
Sbjct  3    MKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLR  62

Query  60   VMGALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSSAEVEDLDPAVLSTNGETTW  119
            VM+ALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKS+AEVE+ D +       + W
Sbjct  63   VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQCDGTT-----SSLW  117

Query  120  SDWIDVRLLIDALPTERREALILTQVLGYSYEEAAKIANVRIGT  163
            ++W+DVR+LIDALP+ERREALILTQVLG+SYEEAAKIA+VRIGT
Sbjct  118  AEWVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGT  161

23) sigC in NC_017945


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  212 bits (788),  Expect = 2e-56, Method: Compositional matrix adjust.
 Identities = 130/164 (80%), Positives = 146/164 (90%), Gaps = 6/164 (3%)

Query  1    MKNSERDDR-VTQLALAAGRGDKTALTEFIRETQNDVWRLLAHLGGSEIADDLTQETYLR  59
            MK SERDD  VT LAL AGRGD++ALT FIR TQ DVWRLLAHLGG++IADDLTQETYLR
Sbjct  3    MKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLR  62

Query  60   VMGALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSSAEVEDLDPAVLSTNGETTW  119
            VM+ALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKS+AEVE+ D +       + W
Sbjct  63   VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQCDGTT-----SSLW  117

Query  120  SDWIDVRLLIDALPTERREALILTQVLGYSYEEAAKIANVRIGT  163
            ++W+DVR+LIDALP+ERREALILTQVLG+SYEEAAKIA+VRIGT
Sbjct  118  AEWVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGT  161

24) sigC in NC_017462


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  212 bits (788),  Expect = 2e-56, Method: Compositional matrix adjust.
 Identities = 130/164 (80%), Positives = 146/164 (90%), Gaps = 6/164 (3%)

Query  1    MKNSERDDR-VTQLALAAGRGDKTALTEFIRETQNDVWRLLAHLGGSEIADDLTQETYLR  59
            MK SERDD  VT LAL AGRGD++ALT FIR TQ DVWRLLAHLGG++IADDLTQETYLR
Sbjct  3    MKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLR  62

Query  60   VMGALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSSAEVEDLDPAVLSTNGETTW  119
            VM+ALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKS+AEVE+ D +       + W
Sbjct  63   VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQCDGTT-----SSLW  117

Query  120  SDWIDVRLLIDALPTERREALILTQVLGYSYEEAAKIANVRIGT  163
            ++W+DVR+LIDALP+ERREALILTQVLG+SYEEAAKIA+VRIGT
Sbjct  118  AEWVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGT  161

25) sigC in NC_016932


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  212 bits (788),  Expect = 2e-56, Method: Compositional matrix adjust.
 Identities = 130/164 (80%), Positives = 146/164 (90%), Gaps = 6/164 (3%)

Query  1    MKNSERDDR-VTQLALAAGRGDKTALTEFIRETQNDVWRLLAHLGGSEIADDLTQETYLR  59
            MK SERDD  VT LAL AGRGD++ALT FIR TQ DVWRLLAHLGG++IADDLTQETYLR
Sbjct  3    MKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLR  62

Query  60   VMGALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSSAEVEDLDPAVLSTNGETTW  119
            VM+ALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKS+AEVE+ D +       + W
Sbjct  63   VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQCDGTT-----SSLW  117

Query  120  SDWIDVRLLIDALPTERREALILTQVLGYSYEEAAKIANVRIGT  163
            ++W+DVR+LIDALP+ERREALILTQVLG+SYEEAAKIA+VRIGT
Sbjct  118  AEWVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGT  161

26) sigC in NC_016781


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  212 bits (788),  Expect = 2e-56, Method: Compositional matrix adjust.
 Identities = 130/164 (80%), Positives = 146/164 (90%), Gaps = 6/164 (3%)

Query  1    MKNSERDDR-VTQLALAAGRGDKTALTEFIRETQNDVWRLLAHLGGSEIADDLTQETYLR  59
            MK SERDD  VT LAL AGRGD++ALT FIR TQ DVWRLLAHLGG++IADDLTQETYLR
Sbjct  3    MKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLR  62

Query  60   VMGALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSSAEVEDLDPAVLSTNGETTW  119
            VM+ALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKS+AEVE+ D +       + W
Sbjct  63   VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQCDGTT-----SSLW  117

Query  120  SDWIDVRLLIDALPTERREALILTQVLGYSYEEAAKIANVRIGT  163
            ++W+DVR+LIDALP+ERREALILTQVLG+SYEEAAKIA+VRIGT
Sbjct  118  AEWVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGT  161

27) sigC in NC_017306


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  212 bits (788),  Expect = 2e-56, Method: Compositional matrix adjust.
 Identities = 130/164 (80%), Positives = 146/164 (90%), Gaps = 6/164 (3%)

Query  1    MKNSERDDR-VTQLALAAGRGDKTALTEFIRETQNDVWRLLAHLGGSEIADDLTQETYLR  59
            MK SERDD  VT LAL AGRGD++ALT FIR TQ DVWRLLAHLGG++IADDLTQETYLR
Sbjct  3    MKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLR  62

Query  60   VMGALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSSAEVEDLDPAVLSTNGETTW  119
            VM+ALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKS+AEVE+ D +       + W
Sbjct  63   VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQCDGTT-----SSLW  117

Query  120  SDWIDVRLLIDALPTERREALILTQVLGYSYEEAAKIANVRIGT  163
            ++W+DVR+LIDALP+ERREALILTQVLG+SYEEAAKIA+VRIGT
Sbjct  118  AEWVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGT  161

28) sigC in NC_017301


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  212 bits (788),  Expect = 2e-56, Method: Compositional matrix adjust.
 Identities = 130/164 (80%), Positives = 146/164 (90%), Gaps = 6/164 (3%)

Query  1    MKNSERDDR-VTQLALAAGRGDKTALTEFIRETQNDVWRLLAHLGGSEIADDLTQETYLR  59
            MK SERDD  VT LAL AGRGD++ALT FIR TQ DVWRLLAHLGG++IADDLTQETYLR
Sbjct  3    MKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLR  62

Query  60   VMGALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSSAEVEDLDPAVLSTNGETTW  119
            VM+ALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKS+AEVE+ D +       + W
Sbjct  63   VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQCDGTT-----SSLW  117

Query  120  SDWIDVRLLIDALPTERREALILTQVLGYSYEEAAKIANVRIGT  163
            ++W+DVR+LIDALP+ERREALILTQVLG+SYEEAAKIA+VRIGT
Sbjct  118  AEWVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGT  161

29) sigC in NC_018019


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  212 bits (788),  Expect = 2e-56, Method: Compositional matrix adjust.
 Identities = 130/164 (80%), Positives = 146/164 (90%), Gaps = 6/164 (3%)

Query  1    MKNSERDDR-VTQLALAAGRGDKTALTEFIRETQNDVWRLLAHLGGSEIADDLTQETYLR  59
            MK SERDD  VT LAL AGRGD++ALT FIR TQ DVWRLLAHLGG++IADDLTQETYLR
Sbjct  3    MKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLR  62

Query  60   VMGALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSSAEVEDLDPAVLSTNGETTW  119
            VM+ALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKS+AEVE+ D +       + W
Sbjct  63   VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQCDGTT-----SSLW  117

Query  120  SDWIDVRLLIDALPTERREALILTQVLGYSYEEAAKIANVRIGT  163
            ++W+DVR+LIDALP+ERREALILTQVLG+SYEEAAKIA+VRIGT
Sbjct  118  AEWVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGT  161

30) sigC in NC_014329


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  212 bits (788),  Expect = 2e-56, Method: Compositional matrix adjust.
 Identities = 130/164 (80%), Positives = 146/164 (90%), Gaps = 6/164 (3%)

Query  1    MKNSERDDR-VTQLALAAGRGDKTALTEFIRETQNDVWRLLAHLGGSEIADDLTQETYLR  59
            MK SERDD  VT LAL AGRGD++ALT FIR TQ DVWRLLAHLGG++IADDLTQETYLR
Sbjct  3    MKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLR  62

Query  60   VMGALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSSAEVEDLDPAVLSTNGETTW  119
            VM+ALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKS+AEVE+ D +       + W
Sbjct  63   VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQCDGTT-----SSLW  117

Query  120  SDWIDVRLLIDALPTERREALILTQVLGYSYEEAAKIANVRIGT  163
            ++W+DVR+LIDALP+ERREALILTQVLG+SYEEAAKIA+VRIGT
Sbjct  118  AEWVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGT  161

31) sigC in NC_017303


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  212 bits (788),  Expect = 2e-56, Method: Compositional matrix adjust.
 Identities = 130/164 (80%), Positives = 146/164 (90%), Gaps = 6/164 (3%)

Query  1    MKNSERDDR-VTQLALAAGRGDKTALTEFIRETQNDVWRLLAHLGGSEIADDLTQETYLR  59
            MK SERDD  VT LAL AGRGD++ALT FIR TQ DVWRLLAHLGG++IADDLTQETYLR
Sbjct  3    MKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLR  62

Query  60   VMGALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSSAEVEDLDPAVLSTNGETTW  119
            VM+ALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKS+AEVE+ D +       + W
Sbjct  63   VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQCDGTT-----SSLW  117

Query  120  SDWIDVRLLIDALPTERREALILTQVLGYSYEEAAKIANVRIGT  163
            ++W+DVR+LIDALP+ERREALILTQVLG+SYEEAAKIA+VRIGT
Sbjct  118  AEWVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGT  161

32) sigC in NC_017031


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  212 bits (788),  Expect = 2e-56, Method: Compositional matrix adjust.
 Identities = 130/164 (80%), Positives = 146/164 (90%), Gaps = 6/164 (3%)

Query  1    MKNSERDDR-VTQLALAAGRGDKTALTEFIRETQNDVWRLLAHLGGSEIADDLTQETYLR  59
            MK SERDD  VT LAL AGRGD++ALT FIR TQ DVWRLLAHLGG++IADDLTQETYLR
Sbjct  3    MKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLR  62

Query  60   VMGALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSSAEVEDLDPAVLSTNGETTW  119
            VM+ALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKS+AEVE+ D +       + W
Sbjct  63   VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQCDGTT-----SSLW  117

Query  120  SDWIDVRLLIDALPTERREALILTQVLGYSYEEAAKIANVRIGT  163
            ++W+DVR+LIDALP+ERREALILTQVLG+SYEEAAKIA+VRIGT
Sbjct  118  AEWVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGT  161

33) sigC in NC_017305


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  212 bits (788),  Expect = 2e-56, Method: Compositional matrix adjust.
 Identities = 130/164 (80%), Positives = 146/164 (90%), Gaps = 6/164 (3%)

Query  1    MKNSERDDR-VTQLALAAGRGDKTALTEFIRETQNDVWRLLAHLGGSEIADDLTQETYLR  59
            MK SERDD  VT LAL AGRGD++ALT FIR TQ DVWRLLAHLGG++IADDLTQETYLR
Sbjct  3    MKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLR  62

Query  60   VMGALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSSAEVEDLDPAVLSTNGETTW  119
            VM+ALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKS+AEVE+ D +       + W
Sbjct  63   VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQCDGTT-----SSLW  117

Query  120  SDWIDVRLLIDALPTERREALILTQVLGYSYEEAAKIANVRIGT  163
            ++W+DVR+LIDALP+ERREALILTQVLG+SYEEAAKIA+VRIGT
Sbjct  118  AEWVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGT  161

34) H924_01115 in NC_020506


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  204 bits (758),  Expect = 4e-54, Method: Compositional matrix adjust.
 Identities = 132/167 (80%), Positives = 149/167 (90%), Gaps = 3/167 (1%)

Query  1    MKPQERNDAYVTElalaagrgdraalTEFIRETQDDVWRLLAHLGGPQSADDLTQETFLR  60
            MKP ER+D YVT LAL AGRGDRAALT FIR TQ DVWRLLAHLGG + ADDLTQET+LR
Sbjct  3    MKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLR  62

Query  61   VMGALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSIVEYENSGATDASSSTIWSE  120
            VM+ALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKS  E E+    D+++S++W+E
Sbjct  63   VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQC---DGTTSSLWAE  119

Query  121  WIDLKTLIDALPVERREALILTQVLGYSYEESAKIADVRVGTIRSRV  167
            W+D++ LIDALP ERREALILTQVLG+SYEE+AKIADVR+GTIRSRV
Sbjct  120  WVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGTIRSRV  166

35) SigC in NC_020519


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  199 bits (739),  Expect = 1e-52, Method: Compositional matrix adjust.
 Identities = 132/165 (80%), Positives = 147/165 (90%), Gaps = 3/165 (1%)

Query  1    MKSKERNDAHVTElalaagrgdraalTDFIRETQDDVWRLLAHLGGHEIADDLTQETYLR  60
            MK+ ER+D  VT LAL AGRGDRAALT FIR TQ DVWRLLAHLGG +IADDLTQETYLR
Sbjct  3    MKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLR  62

Query  61   VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSIVEYEDTGATDASNAGIWSE  120
            VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKS  E E+    D++ +++W+E
Sbjct  63   VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQ---CDGTTSSLWAE  119

Query  121  WIDVRTLIDALPPERREALILTQVLGYTYEEAAKIADVRVGTIRS  165
            W+DVR LIDALP+ERREALILTQVLG++YEEAAKIADVR+GTIRS
Sbjct  120  WVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGTIRS  164

36) Cgl0254 in NC_003450


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  199 bits (739),  Expect = 1e-52, Method: Compositional matrix adjust.
 Identities = 132/165 (80%), Positives = 147/165 (90%), Gaps = 3/165 (1%)

Query  1    MKSKERNDAHVTElalaagrgdraalTDFIRETQDDVWRLLAHLGGHEIADDLTQETYLR  60
            MK+ ER+D  VT LAL AGRGDRAALT FIR TQ DVWRLLAHLGG +IADDLTQETYLR
Sbjct  3    MKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLR  62

Query  61   VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSIVEYEDTGATDASNAGIWSE  120
            VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKS  E E+    D++ +++W+E
Sbjct  63   VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQ---CDGTTSSLWAE  119

Query  121  WIDVRTLIDALPPERREALILTQVLGYTYEEAAKIADVRVGTIRS  165
            W+DVR LIDALP+ERREALILTQVLG++YEEAAKIADVR+GTIRS
Sbjct  120  WVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGTIRS  164

37) sigC in NC_006958


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  199 bits (739),  Expect = 1e-52, Method: Compositional matrix adjust.
 Identities = 132/165 (80%), Positives = 147/165 (90%), Gaps = 3/165 (1%)

Query  1    MKSKERNDAHVTElalaagrgdraalTDFIRETQDDVWRLLAHLGGHEIADDLTQETYLR  60
            MK+ ER+D  VT LAL AGRGDRAALT FIR TQ DVWRLLAHLGG +IADDLTQETYLR
Sbjct  3    MKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLR  62

Query  61   VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSIVEYEDTGATDASNAGIWSE  120
            VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKS  E E+    D++ +++W+E
Sbjct  63   VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQ---CDGTTSSLWAE  119

Query  121  WIDVRTLIDALPPERREALILTQVLGYTYEEAAKIADVRVGTIRS  165
            W+DVR LIDALP+ERREALILTQVLG++YEEAAKIADVR+GTIRS
Sbjct  120  WVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGTIRS  164

38) cgp_0309 in NC_022040


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  199 bits (739),  Expect = 1e-52, Method: Compositional matrix adjust.
 Identities = 132/165 (80%), Positives = 147/165 (90%), Gaps = 3/165 (1%)

Query  1    MKSKERNDAHVTElalaagrgdraalTDFIRETQDDVWRLLAHLGGHEIADDLTQETYLR  60
            MK+ ER+D  VT LAL AGRGDRAALT FIR TQ DVWRLLAHLGG +IADDLTQETYLR
Sbjct  3    MKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLR  62

Query  61   VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSIVEYEDTGATDASNAGIWSE  120
            VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKS  E E+    D++ +++W+E
Sbjct  63   VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQ---CDGTTSSLWAE  119

Query  121  WIDVRTLIDALPPERREALILTQVLGYTYEEAAKIADVRVGTIRS  165
            W+DVR LIDALP+ERREALILTQVLG++YEEAAKIADVR+GTIRS
Sbjct  120  WVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGTIRS  164

39) cgR_0331 in NC_009342


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  198 bits (737),  Expect = 2e-52, Method: Compositional matrix adjust.
 Identities = 131/165 (80%), Positives = 147/165 (90%), Gaps = 3/165 (1%)

Query  1    MKSKERNDAHVTElalaagrgdraalTDFIRETQDDVWRLLAHLGGHEIADDLTQETYLR  60
            MK+ ER+D  VT LAL AGRGDRAALT FIR TQ DVWRLLAHLGG +IADDLTQETYLR
Sbjct  3    MKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLR  62

Query  61   VMGALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSIVEYEDTGATDASNAGIWSE  120
            VM+ALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKS  E E+    D++ +++W+E
Sbjct  63   VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQ---CDGTTSSLWAE  119

Query  121  WIDVRTLIDALPPERREALILTQVLGYTYEEAAKIADVRVGTIRS  165
            W+DVR LIDALP+ERREALILTQVLG++YEEAAKIADVR+GTIRS
Sbjct  120  WVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGTIRS  164

40) C624_01615 in NC_021351


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  198 bits (737),  Expect = 2e-52, Method: Compositional matrix adjust.
 Identities = 131/165 (80%), Positives = 147/165 (90%), Gaps = 3/165 (1%)

Query  1    MKSKERNDAHVTElalaagrgdraalTDFIRETQDDVWRLLAHLGGHEIADDLTQETYLR  60
            MK+ ER+D  VT LAL AGRGDRAALT FIR TQ DVWRLLAHLGG +IADDLTQETYLR
Sbjct  3    MKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLR  62

Query  61   VMGALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSIVEYEDTGATDASNAGIWSE  120
            VM+ALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKS  E E+    D++ +++W+E
Sbjct  63   VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQ---CDGTTSSLWAE  119

Query  121  WIDVRTLIDALPPERREALILTQVLGYTYEEAAKIADVRVGTIRS  165
            W+DVR LIDALP+ERREALILTQVLG++YEEAAKIADVR+GTIRS
Sbjct  120  WVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGTIRS  164

41) C629_01615 in NC_021352


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  198 bits (737),  Expect = 2e-52, Method: Compositional matrix adjust.
 Identities = 131/165 (80%), Positives = 147/165 (90%), Gaps = 3/165 (1%)

Query  1    MKSKERNDAHVTElalaagrgdraalTDFIRETQDDVWRLLAHLGGHEIADDLTQETYLR  60
            MK+ ER+D  VT LAL AGRGDRAALT FIR TQ DVWRLLAHLGG +IADDLTQETYLR
Sbjct  3    MKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLR  62

Query  61   VMGALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSIVEYEDTGATDASNAGIWSE  120
            VM+ALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKS  E E+    D++ +++W+E
Sbjct  63   VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQ---CDGTTSSLWAE  119

Query  121  WIDVRTLIDALPPERREALILTQVLGYTYEEAAKIADVRVGTIRS  165
            W+DVR LIDALP+ERREALILTQVLG++YEEAAKIADVR+GTIRS
Sbjct  120  WVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGTIRS  164

42) sigC in NC_007164


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  198 bits (736),  Expect = 2e-52, Method: Compositional matrix adjust.
 Identities = 118/169 (70%), Positives = 142/169 (85%), Gaps = 7/169 (4%)

Query  7    SSQAHDAAVTDLALRAASGDRQALTEFISATHDDVWRLLAHLADTDRADDLTQETYLRVL  66
            +S+ +D  VT LAL+A+ GDR ALT FI AT+ DVWRLLAHL++TD ADDLTQETYLRV+
Sbjct  5    PSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLRVM  64

Query  67   SALPRFAARSTARTWILSLARRVWVDSVRHDMARPRSSATEIEDATSATPAAETTGGQSW  126
            SALPRFAARS+ARTW+LSLARRVWVD++RHDMARPR SA+E+E+  ++T++        W
Sbjct  65   SALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQCDGTTSSL-------W  117

Query  127  AEWVDTRALIDQLEEERREALILTQVLGYTYAEAAKIANVRVGTIRSRV  175
            AEWVD R LID L  ERREALILTQVLG++Y EAAKIA+VR+GTIRSRV
Sbjct  118  AEWVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGTIRSRV  166

43) CARG_00530 in NC_022198


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  194 bits (720),  Expect = 4e-51, Method: Compositional matrix adjust.
 Identities = 117/154 (76%), Positives = 134/154 (88%), Gaps = 2/154 (1%)

Query  9    DAYVTQLALKAGRGDRQALDEFIGATHKDVWRLLAHLSSPDTADDLTQETFLRVLGALPR  68
            D YVT LALKAGRGDR AL  FI AT+ DVWRLLAHL++ D ADDLTQET+LRV++ALPR
Sbjct  10   DDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLRVMSALPR  69

Query  69   FAARSSARTWILSLARRTWVDSIRHDRARPLKSATEYEDAQATTPTSNSWSEWVDARLLI  128
            FAARSSARTW+LSLARR WVD+IRHD ARP KSA+E E+ ++T  TS+ W+EWVD R+LI
Sbjct  70   FAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQCDGT--TSSLWAEWVDVRMLI  127

Query  129  DELPEERREALILTQVLGFSYEEAAKIAGVRVGT  162
            D LP ERREALILTQVLGFSYEEAAKIA+VR+GT
Sbjct  128  DALPAERREALILTQVLGFSYEEAAKIADVRIGT  161

44) B841_01470 in NC_021915


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  192 bits (714),  Expect = 1e-50, Method: Compositional matrix adjust.
 Identities = 133/169 (79%), Positives = 145/169 (86%), Gaps = 6/169 (3%)

Query  3    RHSARDDERVTdlallagrgdraalTEFIRATQDDVWRLLAHLGGQDVADDLTQETYLRV  62
            + S RDD+ VT LAL AGRGDRAALT FIRATQ DVWRLLAHLGG D+ADDLTQETYLRV
Sbjct  4    KPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLRV  63

Query  63   MGALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSATEYEDAASASTVAGADPSSW  122
            M+ALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSA+E E+        G+ +S W
Sbjct  64   MSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQC------DGTTSSLW  117

Query  123  SAWIDARSLIDDLPEERREALILTQVLGYSYEEAAKISDVRIGTIRSRV  171
            + W+D R LID LP ERREALILTQVLG+SYEEAAKI+DVRIGTIRSRV
Sbjct  118  AEWVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGTIRSRV  166

45) sigC in NC_020230


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  188 bits (698),  Expect = 2e-49, Method: Compositional matrix adjust.
 Identities = 110/164 (68%), Positives = 134/164 (82%), Gaps = 7/164 (4%)

Query  19   DAHVTDLALRAARGDKGALNEFISATHDDVWRLLAHLANPDQADDLTQETYLRVLSALPR  78
            D  VT LAL+A+RGD++AL  FI AT+ DVWRLLAHL+  D ADDLTQETYLRV+SALPR
Sbjct  10   DDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLRVMSALPR  69

Query  79   FAARSTARTWILSLARRVWVDSIRHDMARPRKSAAEWEDAAGDTPAAETTGGSSWVEWLD  138
            FAARS+ARTW+LSLARRVWVD+IRHDMARPRKSAAE           + T +S W EW+D
Sbjct  70   FAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAE-------VEQCDGTTSSLWAEWVD  122

Query  139  TQDMLNSLEPDRREALILTQMLGYTYAEAAKIANVRTGTIRSRV  182
             + ++++L ++RREALILTQ+LG++Y EAAKIA+VR GTIRSRV
Sbjct  123  VRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGTIRSRV  166

46) sigC in NC_010545


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  188 bits (696),  Expect = 3e-49, Method: Compositional matrix adjust.
 Identities = 113/164 (69%), Positives = 136/164 (83%), Gaps = 7/164 (4%)

Query  19   DAHVTDLALRAARGDKAALNEFIAATHDDVWRLLAHLANPDQADDLTQETYLRVLSALPR  78
            D  VT LAL+A+RGD+AAL  FI AT+ DVWRLLAHL+  D ADDLTQETYLRV+SALPR
Sbjct  10   DDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLRVMSALPR  69

Query  79   FAARSTARTWILSLARRVWVDSIRHDMARPRKSAAEWEDAAGDTPAAETTGGSSWVEWLD  138
            FAARS+ARTW+LSLARRVWVD+IRHDMARPRKSAAE E+  G       T +S W EW+D
Sbjct  70   FAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQCDG-------TTSSLWAEWVD  122

Query  139  TQDMLNSLEPDRREALILTQMLGYTYAEAAKIANVRTGTIRSRV  182
             + ++++L ++RREALILTQ+LG++Y EAAKIA+VR GTIRSRV
Sbjct  123  VRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGTIRSRV  166

47) sigC in NC_012704


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  184 bits (684),  Expect = 3e-48, Method: Compositional matrix adjust.
 Identities = 110/172 (64%), Positives = 144/172 (84%), Gaps = 7/172 (4%)

Query  26   TVTRHDKDDARVTALALRAGQGDRAALTEFIRRTQKDVWRLLAHLADIDRADDLTQETYL  85
             +   ++DD  VTALAL+AG+GDRAALT FIR TQ DVWRLLAHL++ D ADDLTQETYL
Sbjct  2    NMKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYL  61

Query  86   RIISALPTFAGRSSARTWLLSVARRVWVDSVRHDMARPQSTGTEWETVADQHtatntaas  145
            R++SALP FA+RSSARTWLLS+ARRVWVD++RHDMARP+ +++E     +Q    + ++S
Sbjct  62   RVMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAE----VEQC---DGTTS  114

Query  146  ssWSDWVDVQLLMENLDPDRREALILTQVLGYTYDEAATIVGVRVGTIRSRV  197
            S W++WVDV++L++ L ++RREALILTQVLG++Y+EAA I +VR+GTIRSRV
Sbjct  115  SLWAEWVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGTIRSRV  166

48) sigC in NC_015673


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  176 bits (651),  Expect = 1e-45, Method: Compositional matrix adjust.
 Identities = 106/143 (75%), Positives = 122/143 (86%), Gaps = 7/143 (4%)

Query  33   FISATHDDVWRLLAHLADTDRADDLTQETYLRVLSALPRFAARSSARTWILSLARRVWVD  92
            FI AT+ DVWRLLAHL++TD ADDLTQETYLRV+SALPRFAARSSARTW+LSLARRVWVD
Sbjct  31   FIRATQTDVWRLLAHLGGTDIADDLTQETYLRVMSALPRFAARSSARTWLLSLARRVWVD  90

Query  93   NIRHDMARPRSTGAELEDVAKTSVSPQTTGGSAWAEWVDTRALIDQLDEQRREALILTQM  152
            NIRHDMARPR ++AE+E+        + T +S WAEWVD R LID L  +RREALILTQ+
Sbjct  91   NIRHDMARPRKSAAEVEQC-------DGTTSSLWAEWVDVRMLIDALPAERREALILTQV  143

Query  153  LGYSYEEAAHIANVRVGTIRSRV  175
            LG+SYEEAA IA+VR+GTIRSRV
Sbjct  144  LGFSYEEAAKIADVRIGTIRSRV  166

49) sigC_1 in NC_020133


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  143 bits (526),  Expect = 8e-36, Method: Compositional matrix adjust.
 Identities = 93/164 (57%), Positives = 123/164 (75%), Gaps = 9/164 (5%)

Query  6    ADEQITVLAMAAGRGDRAALAEFIEATQRDVWRLVAYLSDPACADDLTQETFLRAIGALP  65
             D+ +T LA+ AGRGDRAAL+ FI ATQ DVWRL+A L++   ADDLTQET+LR ++ALP
Sbjct  9    DDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLRVMSALP  68

Query  66   RFAGRSNARTWLFSIARRVVVDQIRYKTRRPRPAYVADLGEALGQACRGSR---FEDIVE  122
            RFA+RS+ARTWL+S+ARRV VD+IR    RPR +  A++ +     C G+      + V+
Sbjct  69   RFAARSSARTWLLSLARRVWVDNIRHDMARPRKS-AAEVEQ-----CDGTTSSLWAEWVD  122

Query  123  IRLLLDGLDEKRREALIFTQVLGLSYAEAAQICGSPIGTIRSRV  166
            +R+L+D+L   RREALI+TQVLG+SY EAA+I +  IGTIRSRV
Sbjct  123  VRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGTIRSRV  166

50) sigC_1 in NC_010612


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  142 bits (523),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 93/161 (58%), Positives = 124/161 (78%), Gaps = 3/161 (1%)

Query  6    ADEQITVLAMAAGRGDRAALAEFIEATQRDVWRLVAYLSDPACADDLTQETFLRAIGALP  65
             D+ +T LA+ AGRGDRAAL+ FI ATQ DVWRL+A L++   ADDLTQET+LR ++ALP
Sbjct  9    DDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLRVMSALP  68

Query  66   RFAGRSNARTWLFSIARRVVVDQIRYKTRRPRPAYVADLGEALGQARRGSRFEDIVEIRL  125
            RFA+RS+ARTWL+S+ARRV VD+IR    RPR +  A++ +  G +  +S   + V++R+
Sbjct  69   RFAARSSARTWLLSLARRVWVDNIRHDMARPRKS-AAEVEQCDGTT--SSLWAEWVDVRM  125

Query  126  LLDGLDEKRREALIFTQVLGLSYAEAAQICGSPIGTIRSRV  166
            L+D+L   RREALI+TQVLG+SY EAA+I +  IGTIRSRV
Sbjct  126  LIDALPAERREALILTQVLGFSYEEAAKIADVRIGTIRSRV  166

51) sigC_1 in NC_008611


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  142 bits (523),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 93/161 (58%), Positives = 124/161 (78%), Gaps = 3/161 (1%)

Query  6    ADEQITVLAMAAGRGDRAALAEFIEATQRDVWRLVAYLSDPACADDLTQETFLRAIGALP  65
             D+ +T LA+ AGRGDRAAL+ FI ATQ DVWRL+A L++   ADDLTQET+LR ++ALP
Sbjct  9    DDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLRVMSALP  68

Query  66   RFAGRSNARTWLFSIARRVVVDQIRYKTRRPRPAYVADLGEALGQARRGSRFEDIVEIRL  125
            RFA+RS+ARTWL+S+ARRV VD+IR    RPR +  A++ +  G +  +S   + V++R+
Sbjct  69   RFAARSSARTWLLSLARRVWVDNIRHDMARPRKS-AAEVEQCDGTT--SSLWAEWVDVRM  125

Query  126  LLDGLDEKRREALIFTQVLGLSYAEAAQICGSPIGTIRSRV  166
            L+D+L   RREALI+TQVLG+SY EAA+I +  IGTIRSRV
Sbjct  126  LIDALPAERREALILTQVLGFSYEEAAKIADVRIGTIRSRV  166

52) MASS_3373 in NC_021282


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  140 bits (515),  Expect = 6e-35, Method: Compositional matrix adjust.
 Identities = 86/165 (53%), Positives = 129/165 (79%), Gaps = 2/165 (1%)

Query  1    MATGTDDEQLLELALSAGRGDQSALESLVKATQGDVWRFVAYLADSGVADDLTQETYLRA  60
             ++  DD+ +  LAL AGRGD++AL ++++ATQ DVWR++A L+++++ADDLTQETYLR 
Sbjct  4    KPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLRV  63

Query  61   LGALPRFAGRSTVRTWLLSIARRVVADHIRHLKSRPRIAHGADLEEASLRRPTHRFEELV  120
            ++ALPRFA+RS+ RTWLLS+ARRV  D+IRH  +RPR + +A++E+     ++ +  E V
Sbjct  64   MSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKS-AAEVEQCDGTTSSLW-AEWV  121

Query  121  ELKSLLAALDDDRREALVLTQVVGLSYAETADVCGCAIGTIRSRV  165
            +++ L+ AL  +RREAL+LTQV+G+SY E+A + +  IGTIRSRV
Sbjct  122  DVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGTIRSRV  166

53) MAB_3428c in NC_010397


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  140 bits (515),  Expect = 6e-35, Method: Compositional matrix adjust.
 Identities = 86/165 (53%), Positives = 129/165 (79%), Gaps = 2/165 (1%)

Query  1    MATGTDDEQLLELALSAGRGDQSALESLVKATQGDVWRFVAYLADSGVADDLTQETYLRA  60
             ++  DD+ +  LAL AGRGD++AL ++++ATQ DVWR++A L+++++ADDLTQETYLR 
Sbjct  4    KPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLRV  63

Query  61   LGALPRFAGRSTVRTWLLSIARRVVADHIRHLKSRPRIAHGADLEEASLRRPTHRFEELV  120
            ++ALPRFA+RS+ RTWLLS+ARRV  D+IRH  +RPR + +A++E+     ++ +  E V
Sbjct  64   MSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKS-AAEVEQCDGTTSSLW-AEWV  121

Query  121  ELKSLLAALDDDRREALVLTQVVGLSYAETADVCGCAIGTIRSRV  165
            +++ L+ AL  +RREAL+LTQV+G+SY E+A + +  IGTIRSRV
Sbjct  122  DVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGTIRSRV  166

54) sigC in NC_018150


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  140 bits (515),  Expect = 6e-35, Method: Compositional matrix adjust.
 Identities = 86/165 (53%), Positives = 129/165 (79%), Gaps = 2/165 (1%)

Query  1    MATGTDDEQLLELALSAGRGDQSALESLVKATQGDVWRFVAYLADSGVADDLTQETYLRA  60
             ++  DD+ +  LAL AGRGD++AL ++++ATQ DVWR++A L+++++ADDLTQETYLR 
Sbjct  4    KPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLRV  63

Query  61   LGALPRFAGRSTVRTWLLSIARRVVADHIRHLKSRPRIAHGADLEEASLRRPTHRFEELV  120
            ++ALPRFA+RS+ RTWLLS+ARRV  D+IRH  +RPR + +A++E+     ++ +  E V
Sbjct  64   MSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKS-AAEVEQCDGTTSSLW-AEWV  121

Query  121  ELKSLLAALDDDRREALVLTQVVGLSYAETADVCGCAIGTIRSRV  165
            +++ L+ AL  +RREAL+LTQV+G+SY E+A + +  IGTIRSRV
Sbjct  122  DVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGTIRSRV  166

55) sam38 in NC_019673


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  139 bits (511),  Expect = 1e-34, Method: Compositional matrix adjust.
 Identities = 92/164 (57%), Positives = 122/164 (75%), Gaps = 6/164 (3%)

Query  7    DDDAVTGLALAAGSGDRAALERFIRATQRDVWRLVAHLTDPGRADDLAQEVYLRALRSLP  66
            DDD VT+LAL AG GDRAAL  FIRATQ DVWRL+AHL + + ADDL+QE YLR + +LP
Sbjct  9    DDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLRVMSALP  68

Query  67   AFEGRSSARTWLLSIARRTVVDHLRTAGSRPVIAWSADVQQASDAQRSTSRAAGFEDVVE  126
             F +RSSARTWLLS+ARR  VD++R   +RP  + +A+V+Q  ++  S        + V+
Sbjct  69   RFAARSSARTWLLSLARRVWVDNIRHDMARPRKS-AAEVEQCDGTTSSL-----WAEWVD  122

Query  127  LNLMLAALPADRREALLLTQVLGLSYAEAAEVCGCPIGTVRSRV  170
            + +++ ALPA+RREAL+LTQVLG+SY EAA + +  IGT+RSRV
Sbjct  123  VRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGTIRSRV  166

56) sigC in NC_019952


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  139 bits (510),  Expect = 2e-34, Method: Compositional matrix adjust.
 Identities = 87/167 (53%), Positives = 126/167 (76%), Gaps = 3/167 (1%)

Query  1    MTATASDDEAVTALALSAAKGNGRALEAFIKATQQDVWRFVAYLSDVGSADDLTQETFLR  60
            M ++  DD+ VTALAL A++G+  AL AFI+ATQ DVWR++A L++ + ADDLTQET+LR
Sbjct  3    MKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLR  62

Query  61   AIGAIPRFSARSSARTWLLAIARHVVADHIRHVRSRPRTTRGASPEHLIDGDRHARGFED  120
             ++A+PRF+ARSSARTWLL++AR+V  D+IRH  +RPR  ++A+  +  DG   +    +
Sbjct  63   VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPR--KSAAEVEQCDGT-TSSLWAE  119

Query  121  LVEVTTMIADLTTEQREALLLTQLLGLSYADAAAVCGCPVGTIRSRV  167
             V+V  +I  L +E+REAL+LTQ+LG+SY +AA + +  +GTIRSRV
Sbjct  120  WVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGTIRSRV  166

57) sigC in NC_015848


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  137 bits (503),  Expect = 5e-34, Method: Compositional matrix adjust.
 Identities = 88/167 (53%), Positives = 126/167 (76%), Gaps = 3/167 (1%)

Query  1    MTATASDDEAVTALALSAAKGNGRALEAFIKATQQDVWRFVAYLSDVGSADDLTQETFLR  60
            M ++  DD+ VTALAL A++G+  AL AFI+ATQ DVWR++A L++ + ADDLTQET+LR
Sbjct  3    MKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLR  62

Query  61   AIGAIPRFSARSSARTWLLAIARHVVADHIRHVRSRPRTTRGARPEHLIDGDRHARGFED  120
             ++A+PRF+ARSSARTWLL++AR+V  D+IRH  +RPR + +A  E+  DG   +    +
Sbjct  63   VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKS-AAEVEQ-CDGT-TSSLWAE  119

Query  121  LVEVTTMIADLTTEQREALLLTQLLGLSYADAAAVCGCPVGTIRSRV  167
             V+V  +I  L +E+REAL+LTQ+LG+SY +AA + +  +GTIRSRV
Sbjct  120  WVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGTIRSRV  166

58) sigC in NC_019950


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  137 bits (503),  Expect = 5e-34, Method: Compositional matrix adjust.
 Identities = 88/167 (53%), Positives = 126/167 (76%), Gaps = 3/167 (1%)

Query  1    MTATASDDEAVTALALSAAKGNGRALEAFIKATQQDVWRFVAYLSDVGSADDLTQETFLR  60
            M ++  DD+ VTALAL A++G+  AL AFI+ATQ DVWR++A L++ + ADDLTQET+LR
Sbjct  3    MKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLR  62

Query  61   AIGAIPRFSARSSARTWLLAIARHVVADHIRHVRSRPRTTRGARPEHLIDGDRHARGFED  120
             ++A+PRF+ARSSARTWLL++AR+V  D+IRH  +RPR + +A  E+  DG   +    +
Sbjct  63   VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKS-AAEVEQ-CDGT-TSSLWAE  119

Query  121  LVEVTTMIADLTTEQREALLLTQLLGLSYADAAAVCGCPVGTIRSRV  167
             V+V  +I  L +E+REAL+LTQ+LG+SY +AA + +  +GTIRSRV
Sbjct  120  WVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGTIRSRV  166

59) sigC in NC_019965


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  137 bits (503),  Expect = 5e-34, Method: Compositional matrix adjust.
 Identities = 88/167 (53%), Positives = 126/167 (76%), Gaps = 3/167 (1%)

Query  1    MTATASDDEAVTALALSAAKGNGRALEAFIKATQQDVWRFVAYLSDVGSADDLTQETFLR  60
            M ++  DD+ VTALAL A++G+  AL AFI+ATQ DVWR++A L++ + ADDLTQET+LR
Sbjct  3    MKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLR  62

Query  61   AIGAIPRFSARSSARTWLLAIARHVVADHIRHVRSRPRTTRGARPEHLIDGDRHARGFED  120
             ++A+PRF+ARSSARTWLL++AR+V  D+IRH  +RPR + +A  E+  DG   +    +
Sbjct  63   VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKS-AAEVEQ-CDGT-TSSLWAE  119

Query  121  LVEVTTMIADLTTEQREALLLTQLLGLSYADAAAVCGCPVGTIRSRV  167
             V+V  +I  L +E+REAL+LTQ+LG+SY +AA + +  +GTIRSRV
Sbjct  120  WVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGTIRSRV  166

60) sigC in NC_019951


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  137 bits (503),  Expect = 5e-34, Method: Compositional matrix adjust.
 Identities = 88/167 (53%), Positives = 126/167 (76%), Gaps = 3/167 (1%)

Query  1    MTATASDDEAVTALALSAAKGNGRALEAFIKATQQDVWRFVAYLSDVGSADDLTQETFLR  60
            M ++  DD+ VTALAL A++G+  AL AFI+ATQ DVWR++A L++ + ADDLTQET+LR
Sbjct  3    MKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLR  62

Query  61   AIGAIPRFSARSSARTWLLAIARHVVADHIRHVRSRPRTTRGARPEHLIDGDRHARGFED  120
             ++A+PRF+ARSSARTWLL++AR+V  D+IRH  +RPR + +A  E+  DG   +    +
Sbjct  63   VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKS-AAEVEQ-CDGT-TSSLWAE  119

Query  121  LVEVTTMIADLTTEQREALLLTQLLGLSYADAAAVCGCPVGTIRSRV  167
             V+V  +I  L +E+REAL+LTQ+LG+SY +AA + +  +GTIRSRV
Sbjct  120  WVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGTIRSRV  166

61) sigC in NC_015758


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  137 bits (503),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 87/167 (53%), Positives = 126/167 (76%), Gaps = 3/167 (1%)

Query  1    MTATASDDEAVTALALSAAKGNGRALEAFIKATQQDVWRFVAYLSDVGSADDLTQETFLR  60
            M ++  DD+ VTALAL A++G+  AL AFI+ATQ DVWR++A L++ + ADDLTQET+LR
Sbjct  3    MKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLR  62

Query  61   AIGAIPRFSARSSARTWLLAIARHVVADHIRHVRSRPRTTRGARPEHLIDGDRHARGFED  120
             ++A+PRF+ARSSARTWLL++AR+V  D+IRH  +RPR + +A  E+  DG   +    +
Sbjct  63   VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKS-AAEVEQ-CDGT-TSSLWAE  119

Query  121  LVEVTTMIADLTTDQREALLLTQLLGLSYADAAAVCGCPVGTIRSRV  167
             V+V  +I  L +++REAL+LTQ+LG+SY +AA + +  +GTIRSRV
Sbjct  120  WVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGTIRSRV  166

62) sigC in NC_002945


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  137 bits (503),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 87/167 (53%), Positives = 126/167 (76%), Gaps = 3/167 (1%)

Query  1    MTATASDDEAVTALALSAAKGNGRALEAFIKATQQDVWRFVAYLSDVGSADDLTQETFLR  60
            M ++  DD+ VTALAL A++G+  AL AFI+ATQ DVWR++A L++ + ADDLTQET+LR
Sbjct  3    MKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLR  62

Query  61   AIGAIPRFSARSSARTWLLAIARHVVADHIRHVRSRPRTTRGARPEHLIDGDRHARGFED  120
             ++A+PRF+ARSSARTWLL++AR+V  D+IRH  +RPR + +A  E+  DG   +    +
Sbjct  63   VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKS-AAEVEQ-CDGT-TSSLWAE  119

Query  121  LVEVTTMIADLTTDQREALLLTQLLGLSYADAAAVCGCPVGTIRSRV  167
             V+V  +I  L +++REAL+LTQ+LG+SY +AA + +  +GTIRSRV
Sbjct  120  WVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGTIRSRV  166

63) K60_021490 in NC_020245


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  137 bits (503),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 87/167 (53%), Positives = 126/167 (76%), Gaps = 3/167 (1%)

Query  1    MTATASDDEAVTALALSAAKGNGRALEAFIKATQQDVWRFVAYLSDVGSADDLTQETFLR  60
            M ++  DD+ VTALAL A++G+  AL AFI+ATQ DVWR++A L++ + ADDLTQET+LR
Sbjct  3    MKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLR  62

Query  61   AIGAIPRFSARSSARTWLLAIARHVVADHIRHVRSRPRTTRGARPEHLIDGDRHARGFED  120
             ++A+PRF+ARSSARTWLL++AR+V  D+IRH  +RPR + +A  E+  DG   +    +
Sbjct  63   VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKS-AAEVEQ-CDGT-TSSLWAE  119

Query  121  LVEVTTMIADLTTDQREALLLTQLLGLSYADAAAVCGCPVGTIRSRV  167
             V+V  +I  L +++REAL+LTQ+LG+SY +AA + +  +GTIRSRV
Sbjct  120  WVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGTIRSRV  166

64) sigC in NC_016804


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  137 bits (503),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 87/167 (53%), Positives = 126/167 (76%), Gaps = 3/167 (1%)

Query  1    MTATASDDEAVTALALSAAKGNGRALEAFIKATQQDVWRFVAYLSDVGSADDLTQETFLR  60
            M ++  DD+ VTALAL A++G+  AL AFI+ATQ DVWR++A L++ + ADDLTQET+LR
Sbjct  3    MKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLR  62

Query  61   AIGAIPRFSARSSARTWLLAIARHVVADHIRHVRSRPRTTRGARPEHLIDGDRHARGFED  120
             ++A+PRF+ARSSARTWLL++AR+V  D+IRH  +RPR + +A  E+  DG   +    +
Sbjct  63   VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKS-AAEVEQ-CDGT-TSSLWAE  119

Query  121  LVEVTTMIADLTTDQREALLLTQLLGLSYADAAAVCGCPVGTIRSRV  167
             V+V  +I  L +++REAL+LTQ+LG+SY +AA + +  +GTIRSRV
Sbjct  120  WVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGTIRSRV  166

65) sigC in NC_008769


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  137 bits (503),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 87/167 (53%), Positives = 126/167 (76%), Gaps = 3/167 (1%)

Query  1    MTATASDDEAVTALALSAAKGNGRALEAFIKATQQDVWRFVAYLSDVGSADDLTQETFLR  60
            M ++  DD+ VTALAL A++G+  AL AFI+ATQ DVWR++A L++ + ADDLTQET+LR
Sbjct  3    MKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLR  62

Query  61   AIGAIPRFSARSSARTWLLAIARHVVADHIRHVRSRPRTTRGARPEHLIDGDRHARGFED  120
             ++A+PRF+ARSSARTWLL++AR+V  D+IRH  +RPR + +A  E+  DG   +    +
Sbjct  63   VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKS-AAEVEQ-CDGT-TSSLWAE  119

Query  121  LVEVTTMIADLTTDQREALLLTQLLGLSYADAAAVCGCPVGTIRSRV  167
             V+V  +I  L +++REAL+LTQ+LG+SY +AA + +  +GTIRSRV
Sbjct  120  WVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGTIRSRV  166

66) sigC in NC_012207


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  137 bits (503),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 87/167 (53%), Positives = 126/167 (76%), Gaps = 3/167 (1%)

Query  1    MTATASDDEAVTALALSAAKGNGRALEAFIKATQQDVWRFVAYLSDVGSADDLTQETFLR  60
            M ++  DD+ VTALAL A++G+  AL AFI+ATQ DVWR++A L++ + ADDLTQET+LR
Sbjct  3    MKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLR  62

Query  61   AIGAIPRFSARSSARTWLLAIARHVVADHIRHVRSRPRTTRGARPEHLIDGDRHARGFED  120
             ++A+PRF+ARSSARTWLL++AR+V  D+IRH  +RPR + +A  E+  DG   +    +
Sbjct  63   VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKS-AAEVEQ-CDGT-TSSLWAE  119

Query  121  LVEVTTMIADLTTDQREALLLTQLLGLSYADAAAVCGCPVGTIRSRV  167
             V+V  +I  L +++REAL+LTQ+LG+SY +AA + +  +GTIRSRV
Sbjct  120  WVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGTIRSRV  166

67) J112_11070 in NC_021054


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  137 bits (503),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 87/167 (53%), Positives = 126/167 (76%), Gaps = 3/167 (1%)

Query  1    MTATASDDEAVTALALSAAKGNGRALEAFIKATQQDVWRFVAYLSDVGSADDLTQETFLR  60
            M ++  DD+ VTALAL A++G+  AL AFI+ATQ DVWR++A L++ + ADDLTQET+LR
Sbjct  3    MKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLR  62

Query  61   AIGAIPRFSARSSARTWLLAIARHVVADHIRHVRSRPRTTRGARPEHLIDGDRHARGFED  120
             ++A+PRF+ARSSARTWLL++AR+V  D+IRH  +RPR + +A  E+  DG   +    +
Sbjct  63   VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKS-AAEVEQ-CDGT-TSSLWAE  119

Query  121  LVEVTTMIADLTTDQREALLLTQLLGLSYADAAAVCGCPVGTIRSRV  167
             V+V  +I  L +++REAL+LTQ+LG+SY +AA + +  +GTIRSRV
Sbjct  120  WVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGTIRSRV  166

68) CCDC5079_1913 in NC_017523


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  137 bits (503),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 87/167 (53%), Positives = 126/167 (76%), Gaps = 3/167 (1%)

Query  1    MTATASDDEAVTALALSAAKGNGRALEAFIKATQQDVWRFVAYLSDVGSADDLTQETFLR  60
            M ++  DD+ VTALAL A++G+  AL AFI+ATQ DVWR++A L++ + ADDLTQET+LR
Sbjct  3    MKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLR  62

Query  61   AIGAIPRFSARSSARTWLLAIARHVVADHIRHVRSRPRTTRGARPEHLIDGDRHARGFED  120
             ++A+PRF+ARSSARTWLL++AR+V  D+IRH  +RPR + +A  E+  DG   +    +
Sbjct  63   VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKS-AAEVEQ-CDGT-TSSLWAE  119

Query  121  LVEVTTMIADLTTDQREALLLTQLLGLSYADAAAVCGCPVGTIRSRV  167
             V+V  +I  L +++REAL+LTQ+LG+SY +AA + +  +GTIRSRV
Sbjct  120  WVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGTIRSRV  166

69) sigC in NC_021251


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  137 bits (503),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 87/167 (53%), Positives = 126/167 (76%), Gaps = 3/167 (1%)

Query  1    MTATASDDEAVTALALSAAKGNGRALEAFIKATQQDVWRFVAYLSDVGSADDLTQETFLR  60
            M ++  DD+ VTALAL A++G+  AL AFI+ATQ DVWR++A L++ + ADDLTQET+LR
Sbjct  3    MKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLR  62

Query  61   AIGAIPRFSARSSARTWLLAIARHVVADHIRHVRSRPRTTRGARPEHLIDGDRHARGFED  120
             ++A+PRF+ARSSARTWLL++AR+V  D+IRH  +RPR + +A  E+  DG   +    +
Sbjct  63   VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKS-AAEVEQ-CDGT-TSSLWAE  119

Query  121  LVEVTTMIADLTTDQREALLLTQLLGLSYADAAAVCGCPVGTIRSRV  167
             V+V  +I  L +++REAL+LTQ+LG+SY +AA + +  +GTIRSRV
Sbjct  120  WVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGTIRSRV  166

70) CCDC5180_1889 in NC_017522


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  137 bits (503),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 87/167 (53%), Positives = 126/167 (76%), Gaps = 3/167 (1%)

Query  1    MTATASDDEAVTALALSAAKGNGRALEAFIKATQQDVWRFVAYLSDVGSADDLTQETFLR  60
            M ++  DD+ VTALAL A++G+  AL AFI+ATQ DVWR++A L++ + ADDLTQET+LR
Sbjct  3    MKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLR  62

Query  61   AIGAIPRFSARSSARTWLLAIARHVVADHIRHVRSRPRTTRGARPEHLIDGDRHARGFED  120
             ++A+PRF+ARSSARTWLL++AR+V  D+IRH  +RPR + +A  E+  DG   +    +
Sbjct  63   VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKS-AAEVEQ-CDGT-TSSLWAE  119

Query  121  LVEVTTMIADLTTDQREALLLTQLLGLSYADAAAVCGCPVGTIRSRV  167
             V+V  +I  L +++REAL+LTQ+LG+SY +AA + +  +GTIRSRV
Sbjct  120  WVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGTIRSRV  166

71) sigC in NC_017524


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  137 bits (503),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 87/167 (53%), Positives = 126/167 (76%), Gaps = 3/167 (1%)

Query  1    MTATASDDEAVTALALSAAKGNGRALEAFIKATQQDVWRFVAYLSDVGSADDLTQETFLR  60
            M ++  DD+ VTALAL A++G+  AL AFI+ATQ DVWR++A L++ + ADDLTQET+LR
Sbjct  3    MKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLR  62

Query  61   AIGAIPRFSARSSARTWLLAIARHVVADHIRHVRSRPRTTRGARPEHLIDGDRHARGFED  120
             ++A+PRF+ARSSARTWLL++AR+V  D+IRH  +RPR + +A  E+  DG   +    +
Sbjct  63   VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKS-AAEVEQ-CDGT-TSSLWAE  119

Query  121  LVEVTTMIADLTTDQREALLLTQLLGLSYADAAAVCGCPVGTIRSRV  167
             V+V  +I  L +++REAL+LTQ+LG+SY +AA + +  +GTIRSRV
Sbjct  120  WVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGTIRSRV  166

72) J114_11075 in NC_021194


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  137 bits (503),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 87/167 (53%), Positives = 126/167 (76%), Gaps = 3/167 (1%)

Query  1    MTATASDDEAVTALALSAAKGNGRALEAFIKATQQDVWRFVAYLSDVGSADDLTQETFLR  60
            M ++  DD+ VTALAL A++G+  AL AFI+ATQ DVWR++A L++ + ADDLTQET+LR
Sbjct  3    MKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLR  62

Query  61   AIGAIPRFSARSSARTWLLAIARHVVADHIRHVRSRPRTTRGARPEHLIDGDRHARGFED  120
             ++A+PRF+ARSSARTWLL++AR+V  D+IRH  +RPR + +A  E+  DG   +    +
Sbjct  63   VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKS-AAEVEQ-CDGT-TSSLWAE  119

Query  121  LVEVTTMIADLTTDQREALLLTQLLGLSYADAAAVCGCPVGTIRSRV  167
             V+V  +I  L +++REAL+LTQ+LG+SY +AA + +  +GTIRSRV
Sbjct  120  WVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGTIRSRV  166

73) M943_10725 in NC_021740


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  137 bits (503),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 87/167 (53%), Positives = 126/167 (76%), Gaps = 3/167 (1%)

Query  1    MTATASDDEAVTALALSAAKGNGRALEAFIKATQQDVWRFVAYLSDVGSADDLTQETFLR  60
            M ++  DD+ VTALAL A++G+  AL AFI+ATQ DVWR++A L++ + ADDLTQET+LR
Sbjct  3    MKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLR  62

Query  61   AIGAIPRFSARSSARTWLLAIARHVVADHIRHVRSRPRTTRGARPEHLIDGDRHARGFED  120
             ++A+PRF+ARSSARTWLL++AR+V  D+IRH  +RPR + +A  E+  DG   +    +
Sbjct  63   VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKS-AAEVEQ-CDGT-TSSLWAE  119

Query  121  LVEVTTMIADLTTDQREALLLTQLLGLSYADAAAVCGCPVGTIRSRV  167
             V+V  +I  L +++REAL+LTQ+LG+SY +AA + +  +GTIRSRV
Sbjct  120  WVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGTIRSRV  166

74) sigC in NC_020559


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  137 bits (503),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 87/167 (53%), Positives = 126/167 (76%), Gaps = 3/167 (1%)

Query  1    MTATASDDEAVTALALSAAKGNGRALEAFIKATQQDVWRFVAYLSDVGSADDLTQETFLR  60
            M ++  DD+ VTALAL A++G+  AL AFI+ATQ DVWR++A L++ + ADDLTQET+LR
Sbjct  3    MKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLR  62

Query  61   AIGAIPRFSARSSARTWLLAIARHVVADHIRHVRSRPRTTRGARPEHLIDGDRHARGFED  120
             ++A+PRF+ARSSARTWLL++AR+V  D+IRH  +RPR + +A  E+  DG   +    +
Sbjct  63   VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKS-AAEVEQ-CDGT-TSSLWAE  119

Query  121  LVEVTTMIADLTTDQREALLLTQLLGLSYADAAAVCGCPVGTIRSRV  167
             V+V  +I  L +++REAL+LTQ+LG+SY +AA + +  +GTIRSRV
Sbjct  120  WVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGTIRSRV  166

75) sigC in NC_009525


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  137 bits (503),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 87/167 (53%), Positives = 126/167 (76%), Gaps = 3/167 (1%)

Query  1    MTATASDDEAVTALALSAAKGNGRALEAFIKATQQDVWRFVAYLSDVGSADDLTQETFLR  60
            M ++  DD+ VTALAL A++G+  AL AFI+ATQ DVWR++A L++ + ADDLTQET+LR
Sbjct  3    MKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLR  62

Query  61   AIGAIPRFSARSSARTWLLAIARHVVADHIRHVRSRPRTTRGARPEHLIDGDRHARGFED  120
             ++A+PRF+ARSSARTWLL++AR+V  D+IRH  +RPR + +A  E+  DG   +    +
Sbjct  63   VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKS-AAEVEQ-CDGT-TSSLWAE  119

Query  121  LVEVTTMIADLTTDQREALLLTQLLGLSYADAAAVCGCPVGTIRSRV  167
             V+V  +I  L +++REAL+LTQ+LG+SY +AA + +  +GTIRSRV
Sbjct  120  WVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGTIRSRV  166

76) RVBD_2069 in NC_018143


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  137 bits (503),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 87/167 (53%), Positives = 126/167 (76%), Gaps = 3/167 (1%)

Query  1    MTATASDDEAVTALALSAAKGNGRALEAFIKATQQDVWRFVAYLSDVGSADDLTQETFLR  60
            M ++  DD+ VTALAL A++G+  AL AFI+ATQ DVWR++A L++ + ADDLTQET+LR
Sbjct  3    MKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLR  62

Query  61   AIGAIPRFSARSSARTWLLAIARHVVADHIRHVRSRPRTTRGARPEHLIDGDRHARGFED  120
             ++A+PRF+ARSSARTWLL++AR+V  D+IRH  +RPR + +A  E+  DG   +    +
Sbjct  63   VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKS-AAEVEQ-CDGT-TSSLWAE  119

Query  121  LVEVTTMIADLTTDQREALLLTQLLGLSYADAAAVCGCPVGTIRSRV  167
             V+V  +I  L +++REAL+LTQ+LG+SY +AA + +  +GTIRSRV
Sbjct  120  WVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGTIRSRV  166

77) sigC in NC_000962


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  137 bits (503),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 87/167 (53%), Positives = 126/167 (76%), Gaps = 3/167 (1%)

Query  1    MTATASDDEAVTALALSAAKGNGRALEAFIKATQQDVWRFVAYLSDVGSADDLTQETFLR  60
            M ++  DD+ VTALAL A++G+  AL AFI+ATQ DVWR++A L++ + ADDLTQET+LR
Sbjct  3    MKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLR  62

Query  61   AIGAIPRFSARSSARTWLLAIARHVVADHIRHVRSRPRTTRGARPEHLIDGDRHARGFED  120
             ++A+PRF+ARSSARTWLL++AR+V  D+IRH  +RPR + +A  E+  DG   +    +
Sbjct  63   VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKS-AAEVEQ-CDGT-TSSLWAE  119

Query  121  LVEVTTMIADLTTDQREALLLTQLLGLSYADAAAVCGCPVGTIRSRV  167
             V+V  +I  L +++REAL+LTQ+LG+SY +AA + +  +GTIRSRV
Sbjct  120  WVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGTIRSRV  166

78) TBXG_001897 in NC_018078


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  137 bits (503),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 87/167 (53%), Positives = 126/167 (76%), Gaps = 3/167 (1%)

Query  1    MTATASDDEAVTALALSAAKGNGRALEAFIKATQQDVWRFVAYLSDVGSADDLTQETFLR  60
            M ++  DD+ VTALAL A++G+  AL AFI+ATQ DVWR++A L++ + ADDLTQET+LR
Sbjct  3    MKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLR  62

Query  61   AIGAIPRFSARSSARTWLLAIARHVVADHIRHVRSRPRTTRGARPEHLIDGDRHARGFED  120
             ++A+PRF+ARSSARTWLL++AR+V  D+IRH  +RPR + +A  E+  DG   +    +
Sbjct  63   VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKS-AAEVEQ-CDGT-TSSLWAE  119

Query  121  LVEVTTMIADLTTDQREALLLTQLLGLSYADAAAVCGCPVGTIRSRV  167
             V+V  +I  L +++REAL+LTQ+LG+SY +AA + +  +GTIRSRV
Sbjct  120  WVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGTIRSRV  166

79) MRGA327_12740 in NC_017026


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  137 bits (503),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 87/167 (53%), Positives = 126/167 (76%), Gaps = 3/167 (1%)

Query  1    MTATASDDEAVTALALSAAKGNGRALEAFIKATQQDVWRFVAYLSDVGSADDLTQETFLR  60
            M ++  DD+ VTALAL A++G+  AL AFI+ATQ DVWR++A L++ + ADDLTQET+LR
Sbjct  3    MKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLR  62

Query  61   AIGAIPRFSARSSARTWLLAIARHVVADHIRHVRSRPRTTRGARPEHLIDGDRHARGFED  120
             ++A+PRF+ARSSARTWLL++AR+V  D+IRH  +RPR + +A  E+  DG   +    +
Sbjct  63   VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKS-AAEVEQ-CDGT-TSSLWAE  119

Query  121  LVEVTTMIADLTTDQREALLLTQLLGLSYADAAAVCGCPVGTIRSRV  167
             V+V  +I  L +++REAL+LTQ+LG+SY +AA + +  +GTIRSRV
Sbjct  120  WVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGTIRSRV  166

80) MRGA423_12885 in NC_017528


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  137 bits (503),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 87/167 (53%), Positives = 126/167 (76%), Gaps = 3/167 (1%)

Query  1    MTATASDDEAVTALALSAAKGNGRALEAFIKATQQDVWRFVAYLSDVGSADDLTQETFLR  60
            M ++  DD+ VTALAL A++G+  AL AFI+ATQ DVWR++A L++ + ADDLTQET+LR
Sbjct  3    MKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLR  62

Query  61   AIGAIPRFSARSSARTWLLAIARHVVADHIRHVRSRPRTTRGARPEHLIDGDRHARGFED  120
             ++A+PRF+ARSSARTWLL++AR+V  D+IRH  +RPR + +A  E+  DG   +    +
Sbjct  63   VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKS-AAEVEQ-CDGT-TSSLWAE  119

Query  121  LVEVTTMIADLTTDQREALLLTQLLGLSYADAAAVCGCPVGTIRSRV  167
             V+V  +I  L +++REAL+LTQ+LG+SY +AA + +  +GTIRSRV
Sbjct  120  WVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGTIRSRV  166

81) sigC in NC_020089


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  137 bits (503),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 87/167 (53%), Positives = 126/167 (76%), Gaps = 3/167 (1%)

Query  1    MTATASDDEAVTALALSAAKGNGRALEAFIKATQQDVWRFVAYLSDVGSADDLTQETFLR  60
            M ++  DD+ VTALAL A++G+  AL AFI+ATQ DVWR++A L++ + ADDLTQET+LR
Sbjct  3    MKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLR  62

Query  61   AIGAIPRFSARSSARTWLLAIARHVVADHIRHVRSRPRTTRGARPEHLIDGDRHARGFED  120
             ++A+PRF+ARSSARTWLL++AR+V  D+IRH  +RPR + +A  E+  DG   +    +
Sbjct  63   VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKS-AAEVEQ-CDGT-TSSLWAE  119

Query  121  LVEVTTMIADLTTDQREALLLTQLLGLSYADAAAVCGCPVGTIRSRV  167
             V+V  +I  L +++REAL+LTQ+LG+SY +AA + +  +GTIRSRV
Sbjct  120  WVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGTIRSRV  166

82) sigC in NC_016934


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  137 bits (503),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 87/167 (53%), Positives = 126/167 (76%), Gaps = 3/167 (1%)

Query  1    MTATASDDEAVTALALSAAKGNGRALEAFIKATQQDVWRFVAYLSDVGSADDLTQETFLR  60
            M ++  DD+ VTALAL A++G+  AL AFI+ATQ DVWR++A L++ + ADDLTQET+LR
Sbjct  3    MKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLR  62

Query  61   AIGAIPRFSARSSARTWLLAIARHVVADHIRHVRSRPRTTRGARPEHLIDGDRHARGFED  120
             ++A+PRF+ARSSARTWLL++AR+V  D+IRH  +RPR + +A  E+  DG   +    +
Sbjct  63   VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKS-AAEVEQ-CDGT-TSSLWAE  119

Query  121  LVEVTTMIADLTTDQREALLLTQLLGLSYADAAAVCGCPVGTIRSRV  167
             V+V  +I  L +++REAL+LTQ+LG+SY +AA + +  +GTIRSRV
Sbjct  120  WVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGTIRSRV  166

83) sigC in NC_009142


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  135 bits (496),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 88/165 (54%), Positives = 120/165 (73%), Gaps = 1/165 (0%)

Query  1    MSRSAADDAWLTELALAAGTGDRRALEEFIRATQRDVWRFVAHLASVEQADDLAQETYVR  60
            M  S  DD  +T LAL AG GDR AL  FIRATQ DVWR++AHL++ + ADDL+QETY+R
Sbjct  3    MKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLR  62

Query  61   VLRSLPRFAGRASARTWLLSIARRVVVDQVRYARSRPrttaavewataaerpaPGFEDIV  120
            V+ +LPRFA+R+SARTWLLS+ARRV VD++R   +RP   +A E        ++   + V
Sbjct  63   VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARP-RKSAAEVEQCDGTTSSLWAEWV  121

Query  121  ELNMLLAGLDEQRREVLLLTQVLGLSYQETADICGCPVGTVRSRV  165
            ++ ML+ +L  +RRE L+LTQVLG+SY+E+A I +  +GT+RSRV
Sbjct  122  DVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGTIRSRV  166

84) GPOL_c36330 in NC_016906


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  133 bits (488),  Expect = 8e-33, Method: Compositional matrix adjust.
 Identities = 79/139 (57%), Positives = 111/139 (80%), Gaps = 3/139 (2%)

Query  27   FIRATQKDVWRFIAHLGHASTADDLTQETYLRAMKSISRFRAEASAKTWLLSIARRVCAD  86
            FIRATQ DVWR++AHLG +  ADDLTQETYLR M +++RF A +SA+TWLLS+ARRV  D
Sbjct  31   FIRATQTDVWRLLAHLGGTDIADDLTQETYLRVMSALPRFAARSSARTWLLSLARRVWVD  90

Query  87   EVRHDRSRPRVSPGVDWISAAEARASRPRWEDMVEVNLLLEDLPAERREALVLTQILGLS  146
            ++RHD +RPR S++   +   ++ ++ + W + V+V +L++ LPAERREAL+LTQ+LG+S
Sbjct  91   NIRHDMARPRKSAAE--VEQCDG-TTSSLWAEWVDVRMLIDALPAERREALILTQVLGFS  147

Query  147  YQEAAEVTGTPIGTIRSRV  165
            Y+EAA +++  IGTIRSRV
Sbjct  148  YEEAAKIADVRIGTIRSRV  166

85) Amir_2773 in NC_013093


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  131 bits (481),  Expect = 3e-32, Method: Compositional matrix adjust.
 Identities = 84/155 (55%), Positives = 118/155 (77%), Gaps = 7/155 (4%)

Query  20   ALRARSGDRNALEQFVRGTQRDVWRFTAHLAGVDVADDLSQETYARALTSLHRFAGRSSA  79
            AL+A  GDR AL  F+R+TQ DVWR+ AHL+G D+ADDL+QETY R +++L RFA+RSSA
Sbjct  17   ALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLRVMSALPRFAARSSA  76

Query  80   RTWLLVIARRVVVDQVRMAQSRPRLSPGADWVREADRRPAATG--FEDAVELNLLLDSLD  137
            RTWLL +ARRV VD++R   +RPR S++     E ++  ++T+    + V++ +L+D+L 
Sbjct  77   RTWLLSLARRVWVDNIRHDMARPRKSAA-----EVEQCDGTTSSLWAEWVDVRMLIDALP  131

Query  138  QDRREALVLTQVLGLSYAEAADVAGCPVGTIRSRV  172
             +RREAL+LTQVLG+SY EAA +A+  +GTIRSRV
Sbjct  132  AERREALILTQVLGFSYEEAAKIADVRIGTIRSRV  166

86) Mycch_1876 in NC_018027


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  130 bits (475),  Expect = 9e-32, Method: Compositional matrix adjust.
 Identities = 86/157 (55%), Positives = 116/157 (74%), Gaps = 3/157 (1%)

Query  6    DDDQVTHLAKLAGRGDQAALTQFIALTQQDVWRTVAYLADPGSADDLTQETFLRAMKSLP  65
            DDD VT LA  AGRGD+AALT FI  TQ DVWR +A L++ + ADDLTQET+LR M +LP
Sbjct  9    DDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLRVMSALP  68

Query  66   RFSGRSTAKTWLLSIARRVVVDQIRYNTSRPRPAHIVdlddmldgtgggARIENMVEIRI  125
            RF++RS+A+TWLLS+ARRV VD+IR + +RPR +     +     ++  A   + V++R+
Sbjct  69   RFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQCDGTTSSLWA---EWVDVRM  125

Query  126  LLEGLDQDRREALVLTQVLGLSYAEAADICGCPIGTI  162
            L+++L  +RREAL+LTQVLG+SY EAA I +  IGTI
Sbjct  126  LIDALPAERREALILTQVLGFSYEEAAKIADVRIGTI  162

87) MLBr_01448 in NC_011896


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  128 bits (469),  Expect = 2e-31, Method: Compositional matrix adjust.
 Identities = 77/164 (47%), Positives = 119/164 (73%), Gaps = 3/164 (1%)

Query  3    ASSGDEAVTDLALAAARGSKRALEAFIKATQQDVWRFVAYLSDVGNADDLTQETFLRAIG  62
            +  +D+ VT LAL A+RG + AL AFI+ATQ DVWR++A L++ + ADDLTQET+LR ++
Sbjct  6    SERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLRVMS  65

Query  63   AIERFSGHSSGRTWLLAIARRVVADHIRRAQTRPRTTFDGYPERMLNADRHARGFEDLVE  122
            A+ RF+++SS+RTWLL++ARRV  D+IR+  +RPR +     +     +  +    + V+
Sbjct  66   ALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQ---CDGTTSSLWAEWVD  122

Query  123  VTTMIANLATEQREALLLTQLLGLPYADAAAVCGCPVGTIRSRV  166
            V  +I  L++E+REAL+LTQ+LG++Y +AA + +  +GTIRSRV
Sbjct  123  VRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGTIRSRV  166

88) ML1448 in NC_002677


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  128 bits (469),  Expect = 2e-31, Method: Compositional matrix adjust.
 Identities = 77/164 (47%), Positives = 119/164 (73%), Gaps = 3/164 (1%)

Query  3    ASSGDEAVTDLALAAARGSKRALEAFIKATQQDVWRFVAYLSDVGNADDLTQETFLRAIG  62
            +  +D+ VT LAL A+RG + AL AFI+ATQ DVWR++A L++ + ADDLTQET+LR ++
Sbjct  6    SERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLRVMS  65

Query  63   AIERFSGHSSGRTWLLAIARRVVADHIRRAQTRPRTTFDGYPERMLNADRHARGFEDLVE  122
            A+ RF+++SS+RTWLL++ARRV  D+IR+  +RPR +     +     +  +    + V+
Sbjct  66   ALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVEQ---CDGTTSSLWAEWVD  122

Query  123  VTTMIANLATEQREALLLTQLLGLPYADAAAVCGCPVGTIRSRV  166
            V  +I  L++E+REAL+LTQ+LG++Y +AA + +  +GTIRSRV
Sbjct  123  VRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGTIRSRV  166

89) O3I_034420 in NC_018681


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  124 bits (455),  Expect = 3e-30, Method: Compositional matrix adjust.
 Identities = 79/142 (56%), Positives = 109/142 (77%), Gaps = 6/142 (4%)

Query  27   SFIRATQKDVWRLLAHLTEVGRADDLTQETYLRALGSIKRFEGRASARTWLLSIARRVVV  86
            +FIRATQ DVWRLLAHL   + ADDLTQETYLR ++++ RF +R+SARTWLLS+ARRV V
Sbjct  30   AFIRATQTDVWRLLAHLGGTDIADDLTQETYLRVMSALPRFAARSSARTWLLSLARRVWV  89

Query  87   DQVRMAVARPKIAHGVDWAAAADRQVSRRDGL-AEIVELNLLLDDLAPERREALVLTQVL  145
            D++R  +ARP+ +     AA  ++  +   +L AE V++ +L+D L++ERREAL+LTQVL
Sbjct  90   DNIRHDMARPRKS-----AAEVEQCDGTTSSLWAEWVDVRMLIDALPAERREALILTQVL  144

Query  146  GLSYAEAATVCGCPVGTVRSRV  167
            G+SY EAA + +  +GT+RSRV
Sbjct  145  GFSYEEAAKIADVRIGTIRSRV  166

90) Sros_3479 in NC_013595


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  123 bits (449),  Expect = 9e-30, Method: Compositional matrix adjust.
 Identities = 81/166 (49%), Positives = 117/166 (71%), Gaps = 5/166 (3%)

Query  17   AARSDDHLTVLALAARGGAPADVEAFTRAVYADVRRFIAYLAGSHSAEDLTQETFLRVLG  76
            + R DD +T LAL A  G  A + AF RA  +DV+R++A L+G++ A+DLTQET+LRV++
Sbjct  6    SERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLRVMS  65

Query  77   SLPRFAGRSSARTWLLSIARRVVVDRFRSAAARPVVADLSDWQAAAERCQPRGLPGREDG  136
            +LPRFA+RSSARTWLLS+ARRV VD +R   ARP  +      A  E+C+    + + + 
Sbjct  66   ALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSA-----AEVEQCDGTTSSLWAEW  120

Query  137  VALADLLAKVPRERREAFVLTQLVGLPYAEAAAMIGCPIGTVRSRV  182
            V +  L+  +P ERREA++LTQ++G++Y EAA + +  IGT+RSRV
Sbjct  121  VDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGTIRSRV  166

91) Mycch_5904 in NC_018022


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  118 bits (432),  Expect = 2e-28, Method: Compositional matrix adjust.
 Identities = 89/168 (53%), Positives = 122/168 (73%), Gaps = 10/168 (5%)

Query  29   RDAE-VTRLALAAGRGDNDALGQFVRYTRRDVWRLVAYLSNVGTADDLTQETFLRAIGSL  87
            RD + VT LAL AGRGD  AL  F+R T+ DVWRL+A L+  + ADDLTQET+LR +++L
Sbjct  8    RDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLRVMSAL  67

Query  88   PSFSGRSSARTWLFSIArrvvvdqirrdrcrPRTCAATHFSNVVELSRFRGNRQAVAGFE  147
            P F++RSSARTWL+S+ARRV VD+IR+D  RPR  AA       E+ +  G   ++    
Sbjct  68   PRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAA-------EVEQCDGTTSSL--WA  118

Query  148  DIVELRILLDGLDVERRQALLLTQVLGLTYAEAATVCGCPVGTIRSRV  195
            + V++R+L+D+L  ERR+AL+LTQVLG++Y EAA + +  +GTIRSRV
Sbjct  119  EWVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGTIRSRV  166

92) KSE_70250 in NC_016109


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  111 bits (405),  Expect = 3e-26, Method: Compositional matrix adjust.
 Identities = 86/166 (52%), Positives = 116/166 (70%), Gaps = 10/166 (6%)

Query  31   DDAEVTAWALAARGGDPVAVERFVRATRADVWRFVARLSGEPQAADDLTQDTYLRALRSL  90
            DD  VTA AL A  GD  A+  F+RAT++DVWR++A+L+G  + ADDLTQ+TYLR + +L
Sbjct  9    DDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGG-TDIADDLTQETYLRVMSAL  67

Query  91   PRFEGRSSARTWLLAIARRVVVDRHRFAACRPRLLDTDDWQGAAERAQPRGLPG--FDEG  148
            PRF +RSSARTWLL++ARRV VD  R    RPR       ++AAE  Q  G  +    E 
Sbjct  68   PRFAARSSARTWLLSLARRVWVDNIRHDMARPR-------KSAAEVEQCDGTTSSLWAEW  120

Query  149  VALGDLLAALPAERRDAFVLTALLGLPYERAAEVAGCPVGTVRSRV  194
            V +  L+ ALPAERR+A++LT +LG++YE AA +A+  +GT+RSRV
Sbjct  121  VDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGTIRSRV  166

93) RAM_33490 in NC_017186


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  109 bits (398),  Expect = 1e-25, Method: Compositional matrix adjust.
 Identities = 82/169 (49%), Positives = 117/169 (70%), Gaps = 5/169 (2%)

Query  1    MTPERADDADITRWALLAGRGDGPALEQFLRSTQPYVWRFVAGLADAQSADDLTQETYLR  60
            M P   DD  +T  AL AGRGD +AL  F+R+TQ  VWR++A L++++ ADDLTQETYLR
Sbjct  3    MKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLR  62

Query  61   ALGSLPRFKGDSSARTWLLSIARRTVADHIRALQARPRQASVTDWeaaaeraepsraerI  120
             +++LPRF + SSARTWLLS+ARR   D+IR   ARPR+++        E+ + + +   
Sbjct  63   VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAE-----VEQCDGTTSSLW  117

Query  121  DEQVVLDQLVKALDPDRRVAFVLTQTLGLSYVDAAQVCGCPVGTIRSRV  169
             E V +  L+ AL ++RR A++LTQ LG+SY +AA++ +  +GTIRSRV
Sbjct  118  AEWVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGTIRSRV  166

94) SCAB_41571 in NC_013929


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  109 bits (396),  Expect = 2e-25, Method: Compositional matrix adjust.
 Identities = 77/169 (46%), Positives = 113/169 (67%), Gaps = 6/169 (3%)

Query  13   SPRSTTDESITAWALAARGGDPEAVERFVGALQRDVRRFVAHLCADPQAVDDLAQDTFLR  72
             P    D+ +TA AL A  GD  A+  F+ A Q DV+R++AHL ++ +  DDL+Q+T+LR
Sbjct  4    KPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHL-GGTDIADDLTQETYLR  62

Query  73   ALGSLHRFEGRCSARTWLLSIARRAVTDSFRYAAARPRLSDVPDWRLAVEHAQPRGLPGF  132
             +++L RF +R SARTWLLS+ARR   D++R   ARPR S        VE+ +    +  
Sbjct  63   VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAA-----EVEQCDGTTSSLW  117

Query  133  DDGVALTDLLGALPEERREAFVLTQMLGLSYEDAAELAGCPVGTVRSRV  181
             + V +  L++ALP ERREA++LTQ+LG+SYE+AA +A+  +GT+RSRV
Sbjct  118  AEWVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGTIRSRV  166

95) J113_14280 in NC_021193


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  108 bits (393),  Expect = 2e-25, Method: Compositional matrix adjust.
 Identities = 70/138 (51%), Positives = 102/138 (74%), Gaps = 3/138 (2%)

Query  1    MTATASDDEAVTALALSAAKGNGRALEAFIKATQQDVWRFVAYLSDVGSADDLTQETFLR  60
            M ++  DD+ VTALAL A++G+  AL AFI+ATQ DVWR++A L++ + ADDLTQET+LR
Sbjct  3    MKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLR  62

Query  61   AIGAIPRFSARSSARTWLLAIARHVVADHIRHVRSRPRTTRGARPEHLIDGDRHARGFED  120
             ++A+PRF+ARSSARTWLL++AR+V  D+IRH  +RPR + +A  E+  DG   +    +
Sbjct  63   VMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKS-AAEVEQ-CDGT-TSSLWAE  119

Query  121  LVEVTTMIADLTTDQREA  138
             V+V  +I  L +++REA
Sbjct  120  WVDVRMLIDALPAERREA  137

96) MycrhN_3035 in NC_016604


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  107 bits (389),  Expect = 6e-25, Method: Compositional matrix adjust.
 Identities = 92/167 (56%), Positives = 130/167 (78%), Gaps = 8/167 (4%)

Query  19   REDDAVTRLALSAGRGDPDALEQFVRSTRRDVWRLMAYLADVGSADDLTQETFLRAIGSL  78
            R+DD VT LAL AGRGD  AL  F+R+T+ DVWRL+A L++ + ADDLTQET+LR +++L
Sbjct  8    RDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLRVMSAL  67

Query  79   PRFAGRSSARTWLLSIArrvvvdqirrdrcrPRATATDLHNVVELDRFQGQRRAGAQFEE  138
            PRFA+RSSARTWLLS+ARRV VD+IR+D  RPR +A++++        Q +  +++   E
Sbjct  68   PRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAEVE--------QCDGTTSSLWAE  119

Query  139  VVEIRMlldrldtdrrqalllTQVFGLSYAEAAQVCGCPVGTIRSRV  185
             V++RML+D L ++RR+AL+LTQV+G+SY EAA++ +  +GTIRSRV
Sbjct  120  WVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGTIRSRV  166

97) rpoE in NC_022116


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  106 bits (387),  Expect = 8e-25, Method: Compositional matrix adjust.
 Identities = 81/170 (48%), Positives = 117/170 (69%), Gaps = 5/170 (2%)

Query  31   GVTPERADDADITRWALLAGRGDGPALEQFLRSTQPYVWRFVAGLADAQSADDLTQETYL  90
             + P   DD  +T  AL AGRGD +AL  F+R+TQ  VWR++A L++++ ADDLTQETYL
Sbjct  2    NMKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYL  61

Query  91   RALGSLPRFKGDSSARTWLLSIARRTVADHIRALQARPRQASVTDWeaaaeraepsraer  150
            R +++LPRF + SSARTWLLS+ARR   D+IR   ARPR+++        E+ + + +  
Sbjct  62   RVMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAE-----VEQCDGTTSSL  116

Query  151  IDEQVVLDQLVKALDPDRRVAFVLTQTLGLSYVDAAQVCGCPVGTIRSRV  200
              E V +  L+ AL ++RR A++LTQ LG+SY +AA++ +  +GTIRSRV
Sbjct  117  WAEWVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGTIRSRV  166

98) rpoE in NC_018266


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  106 bits (387),  Expect = 8e-25, Method: Compositional matrix adjust.
 Identities = 81/170 (48%), Positives = 117/170 (69%), Gaps = 5/170 (2%)

Query  31   GVTPERADDADITRWALLAGRGDGPALEQFLRSTQPYVWRFVAGLADAQSADDLTQETYL  90
             + P   DD  +T  AL AGRGD +AL  F+R+TQ  VWR++A L++++ ADDLTQETYL
Sbjct  2    NMKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYL  61

Query  91   RALGSLPRFKGDSSARTWLLSIARRTVADHIRALQARPRQASVTDWeaaaeraepsraer  150
            R +++LPRF + SSARTWLLS+ARR   D+IR   ARPR+++        E+ + + +  
Sbjct  62   RVMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAE-----VEQCDGTTSSL  116

Query  151  IDEQVVLDQLVKALDPDRRVAFVLTQTLGLSYVDAAQVCGCPVGTIRSRV  200
              E V +  L+ AL ++RR A++LTQ LG+SY +AA++ +  +GTIRSRV
Sbjct  117  WAEWVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGTIRSRV  166

99) rpoE in NC_014318


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  106 bits (387),  Expect = 8e-25, Method: Compositional matrix adjust.
 Identities = 81/170 (48%), Positives = 117/170 (69%), Gaps = 5/170 (2%)

Query  31   GVTPERADDADITRWALLAGRGDGPALEQFLRSTQPYVWRFVAGLADAQSADDLTQETYL  90
             + P   DD  +T  AL AGRGD +AL  F+R+TQ  VWR++A L++++ ADDLTQETYL
Sbjct  2    NMKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYL  61

Query  91   RALGSLPRFKGDSSARTWLLSIARRTVADHIRALQARPRQASVTDWeaaaeraepsraer  150
            R +++LPRF + SSARTWLLS+ARR   D+IR   ARPR+++        E+ + + +  
Sbjct  62   RVMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAE-----VEQCDGTTSSL  116

Query  151  IDEQVVLDQLVKALDPDRRVAFVLTQTLGLSYVDAAQVCGCPVGTIRSRV  200
              E V +  L+ AL ++RR A++LTQ LG+SY +AA++ +  +GTIRSRV
Sbjct  117  WAEWVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGTIRSRV  166

100) rpoE in NC_022116


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  104 bits (378),  Expect = 4e-24, Method: Compositional matrix adjust.
 Identities = 84/167 (51%), Positives = 121/167 (73%), Gaps = 7/167 (4%)

Query  6    DRDDERITALALAAARGDQRAYADWVRSTQADVWRFVAHLTDPVVADDLTQETYARAVTS  65
            +RDD+ +TALAL A+RGD+ A +  +R+TQ+DVWR++AHL +  +ADDLTQETY R +++
Sbjct  7    ERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLRVMSA  66

Query  66   LSRFAGRSSSRTWLLSIARRAVVDHFRARSARPQLSGQDWTaaaeeqsarsraaasGFee  125
            L+RFA+RSS+RTWLLS+ARR  VD++R   ARP+ S+ +             +++S   E
Sbjct  67   LPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAE-------VEQCDGTTSSLWAE  119

Query  126  vvevgvllrdldeeRREALVLTQLLGHTYAEAAEICGCPVGTVRSRV  172
             V+V +L+  L  ERREAL+LTQ+LG +Y EAA I +  +GT+RSRV
Sbjct  120  WVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGTIRSRV  166

101) RAM_33495 in NC_017186


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  104 bits (378),  Expect = 4e-24, Method: Compositional matrix adjust.
 Identities = 84/167 (51%), Positives = 121/167 (73%), Gaps = 7/167 (4%)

Query  6    DRDDERITALALAAARGDQRAYADWVRSTQADVWRFVAHLTDPVVADDLTQETYARAVTS  65
            +RDD+ +TALAL A+RGD+ A +  +R+TQ+DVWR++AHL +  +ADDLTQETY R +++
Sbjct  7    ERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLRVMSA  66

Query  66   LSRFAGRSSSRTWLLSIARRAVVDHFRARSARPQLSGQDWTaaaeeqsarsraaasGFee  125
            L+RFA+RSS+RTWLLS+ARR  VD++R   ARP+ S+ +             +++S   E
Sbjct  67   LPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAE-------VEQCDGTTSSLWAE  119

Query  126  vvevgvllrdldeeRREALVLTQLLGHTYAEAAEICGCPVGTVRSRV  172
             V+V +L+  L  ERREAL+LTQ+LG +Y EAA I +  +GT+RSRV
Sbjct  120  WVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGTIRSRV  166

102) rpoE in NC_018266


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  104 bits (378),  Expect = 4e-24, Method: Compositional matrix adjust.
 Identities = 84/167 (51%), Positives = 121/167 (73%), Gaps = 7/167 (4%)

Query  6    DRDDERITALALAAARGDQRAYADWVRSTQADVWRFVAHLTDPVVADDLTQETYARAVTS  65
            +RDD+ +TALAL A+RGD+ A +  +R+TQ+DVWR++AHL +  +ADDLTQETY R +++
Sbjct  7    ERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLRVMSA  66

Query  66   LSRFAGRSSSRTWLLSIARRAVVDHFRARSARPQLSGQDWTaaaeeqsarsraaasGFee  125
            L+RFA+RSS+RTWLLS+ARR  VD++R   ARP+ S+ +             +++S   E
Sbjct  67   LPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAE-------VEQCDGTTSSLWAE  119

Query  126  vvevgvllrdldeeRREALVLTQLLGHTYAEAAEICGCPVGTVRSRV  172
             V+V +L+  L  ERREAL+LTQ+LG +Y EAA I +  +GT+RSRV
Sbjct  120  WVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGTIRSRV  166

103) rpoE in NC_014318


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  104 bits (378),  Expect = 4e-24, Method: Compositional matrix adjust.
 Identities = 84/167 (51%), Positives = 121/167 (73%), Gaps = 7/167 (4%)

Query  6    DRDDERITALALAAARGDQRAYADWVRSTQADVWRFVAHLTDPVVADDLTQETYARAVTS  65
            +RDD+ +TALAL A+RGD+ A +  +R+TQ+DVWR++AHL +  +ADDLTQETY R +++
Sbjct  7    ERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLRVMSA  66

Query  66   LSRFAGRSSSRTWLLSIARRAVVDHFRARSARPQLSGQDWTaaaeeqsarsraaasGFee  125
            L+RFA+RSS+RTWLLS+ARR  VD++R   ARP+ S+ +             +++S   E
Sbjct  67   LPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAE-------VEQCDGTTSSLWAE  119

Query  126  vvevgvllrdldeeRREALVLTQLLGHTYAEAAEICGCPVGTVRSRV  172
             V+V +L+  L  ERREAL+LTQ+LG +Y EAA I +  +GT+RSRV
Sbjct  120  WVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGTIRSRV  166

104) sigC in NC_017955


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  103 bits (372),  Expect = 1e-23, Method: Compositional matrix adjust.
 Identities = 71/144 (50%), Positives = 103/144 (72%), Gaps = 12/144 (8%)

Query  22   LIRETQADVWRLCAHLADRQVAEDLTQETYLRALPALARFEGRSSLRTWLLSIARRVCAD  81
            +IR TQ+DVWRL AHL++ ++A+DLTQETYLR ++AL+RF +RSS RTWLLS+ARRV  D
Sbjct  31   FIRATQTDVWRLLAHLGGTDIADDLTQETYLRVMSALPRFAARSSARTWLLSLARRVWVD  90

Query  82   HLR---TRKRRGLVLVGE-DTDLAALERDAPADEVAGTVAAQDVLDRLEPERREAFVLTQ  137
            ++R   +R R++   V + D   ++L         A  V  + ++D L +ERREA++LTQ
Sbjct  91   NIRHDMARPRKSAAEVEQCDGTTSSL--------WAEWVDVRMLIDALPAERREALILTQ  142

Query  138  LIGLPYAEAAEVVGCPIGTIRSRV  161
            ++G++Y EAA + +  IGTIRSRV
Sbjct  143  VLGFSYEEAAKIADVRIGTIRSRV  166

105) rpoE in NC_021252


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  100 bits (361),  Expect = 8e-23, Method: Compositional matrix adjust.
 Identities = 77/144 (54%), Positives = 106/144 (74%), Gaps = 11/144 (7%)

Query  31   VRATQADVWRFVAHLADVGAADDLTQETYLRAFGSLRRFAGRSSSRTWLLsiarrvvvdr  90
            +RATQ+DVWR++AHL++ + ADDLTQETYLR  ++L RFA+RSS+RTWLLS+ARRV VD 
Sbjct  32   IRATQTDVWRLLAHLGGTDIADDLTQETYLRVMSALPRFAARSSARTWLLSLARRVWVDN  91

Query  91   iraasarPKLADVDWEATAERRGARQAEGVAG--FEDLVELRMLLDGLDPERREVLVLTQ  148
            IR   ARP+ +  +           Q +G ++    + V++RML+D+L +ERRE L+LTQ
Sbjct  92   IRHDMARPRKSAAE---------VEQCDGTTSSLWAEWVDVRMLIDALPAERREALILTQ  142

Query  149  VLGLSYAEAAEICGCPVGTVRSRV  172
            VLG+SY EAA I +  +GT+RSRV
Sbjct  143  VLGFSYEEAAKIADVRIGTIRSRV  166

106) L083_4562 in NC_021191


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score =  100 bits (361),  Expect = 9e-23, Method: Compositional matrix adjust.
 Identities = 66/137 (49%), Positives = 95/137 (70%), Gaps = 5/137 (3%)

Query  28   TQRQVWRFLHHLAGPADVEDLTQETYLRALRSLPAFAARSSARTWLFTIARRVAADHVRT  87
            TQ +VWR+L HL+G    +DLTQETYLR + +LP FAARSSARTWL+++ARRV  D++R 
Sbjct  35   TQTDVWRLLAHLGGTDIADDLTQETYLRVMSALPRFAARSSARTWLLSLARRVWVDNIRH  94

Query  88   AVSRPRIaatedwqaaadsaaaPGRPRFEDEVVLRDLLNRLAPERREAFVATQLIGLSYA  147
             ++RPR        A  +   +   +   + V +R L++ L++ERREA++ TQ++G+SY 
Sbjct  95   DMARPR-----KSAAEVEQCDGTTSSLWAEWVDVRMLIDALPAERREALILTQVLGFSYE  149

Query  148  EAAAVCDCPVGTIRSRV  164
            EAA + D  +GTIRSRV
Sbjct  150  EAAKIADVRIGTIRSRV  166

107) Micau_1194 in NC_014391


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score = 98.9 bits (356),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 76/156 (49%), Positives = 102/156 (66%), Gaps = 11/156 (7%)

Query  28   ALAARDGNRDAQAAFVRATQAEVWRFAAALVDPDSADDLTQETYLRAFRALSGFEGRSSV  87
            AL A  G+R A +AF+RATQ++VWR+ A L + D ADDLTQETYLR   AL+ F +RSS 
Sbjct  17   ALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLRVMSALPRFAARSSA  76

Query  88   RTWLLGIARRACADHLrtvvrrrrldarlaaqaatdrPYPDPAGQL-----GATDLVRRL  142
            RTWLL++ARR   D++      R+  AR    AA      + ++ L     +   L+  L
Sbjct  77   RTWLLSLARRVWVDNI------RHDMARPRKSAAEVEQCDGTTSSLWAEWVDVRMLIDAL  130

Query  143  PAERRSAFVLTQLLGLSYAEAADVEGVPVGTIRSRV  178
            PAERR A++LTQ+LG+SY EAA + +V +GTIRSRV
Sbjct  131  PAERREALILTQVLGFSYEEAAKIADVRIGTIRSRV  166

108) ML5_1459 in NC_014815


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score = 98.3 bits (354),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 73/150 (49%), Positives = 99/150 (66%), Gaps = 11/150 (7%)

Query  34   GNRDAQAAFVRATQAEVWRFAAALVDPDSADDLTQETYLRAFRALSGFEGRSSVRTWLLG  93
            G+R A +AF+RATQ++VWR+ A L + D ADDLTQETYLR   AL+ F +RSS RTWLL+
Sbjct  23   GDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLRVMSALPRFAARSSARTWLLS  82

Query  94   IARRACADHLrtvvrrrrldarlaaqaatdrPYPDPAGQL-----GATDLVRRLPAERRS  148
            +ARR   D++      R+  AR    AA      + ++ L     +   L+  LPAERR 
Sbjct  83   LARRVWVDNI------RHDMARPRKSAAEVEQCDGTTSSLWAEWVDVRMLIDALPAERRE  136

Query  149  AFVLTQLLGLSYAEAADVEGVPVGTIRSRV  178
            A++LTQ+LG+SY EAA + +V +GTIRSRV
Sbjct  137  ALILTQVLGFSYEEAAKIADVRIGTIRSRV  166

109) sig10 in NC_020504


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score = 97.5 bits (351),  Expect = 6e-22, Method: Compositional matrix adjust.
 Identities = 72/158 (46%), Positives = 108/158 (69%), Gaps = 6/158 (3%)

Query  24   DESITAWALAARTGDPAAVEHFVRALHRDVLRYVAHLCADPQAVDDLAQDTFLRALGSLH  83
            D+ +TA AL A  GD AA+  F+RA + DV R +AHL ++ +  DDL+Q+T+LR +++L 
Sbjct  10   DDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHL-GGTDIADDLTQETYLRVMSALP  68

Query  84   RFEGRSSARSWLLAIARRAVIDSYRHAAARPRLSDLPDWQLAVENAQPRgvpgfddgvvl  143
            RF +RSSAR+WLL++ARR  +D+ RH  ARPR S        VE+ +    +   + V +
Sbjct  69   RFAARSSARTWLLSLARRVWVDNIRHDMARPRKSA-----AEVEQCDGTTSSLWAEWVDV  123

Query  144  ldllASLPAERREAFVLTQLLGLPYAEAAEVSDCPVGT  181
              L+ +LPAERREA++LTQ+LG++Y EAA ++D  +GT
Sbjct  124  RMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGT  161

110) Tpau_3772 in NC_014158


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score = 95.2 bits (342),  Expect = 3e-21, Method: Compositional matrix adjust.
 Identities = 70/141 (50%), Positives = 103/141 (74%), Gaps = 5/141 (3%)

Query  29   FVALTQHDVRRFVALVAGADEADDLVQETYLRAFGSLHRFEGRSSARTWLTSIARHVVID  88
            F+  TQ DV+R++A ++G+D ADDL QETYLR  ++L RF +RSSARTWL S+AR+V +D
Sbjct  31   FIRATQTDVWRLLAHLGGTDIADDLTQETYLRVMSALPRFAARSSARTWLLSLARRVWVD  90

Query  89   AIRHRTARPSTPVGDGTDLDGLAAAPHRDLPEHARVelrdlleridddrrealVLTQVIG  148
             IRH  ARP  + ++  + DG +++   +     +V++R L++ +  +RREAL+LTQV+G
Sbjct  91   NIRHDMARPRKSAAEVEQCDGTTSSLWAE-----WVDVRMLIDALPAERREALILTQVLG  145

Query  149  FSYAETAQIVGCAIGTIRSRV  169
            FSY E+A+I +  IGTIRSRV
Sbjct  146  FSYEEAAKIADVRIGTIRSRV  166

111) Strvi_5372 in NC_015957


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score = 94.1 bits (338),  Expect = 6e-21, Method: Compositional matrix adjust.
 Identities = 74/156 (48%), Positives = 105/156 (68%), Gaps = 6/156 (3%)

Query  30   ALAARDGDRDAVDHFIRATYRDVRRFVLHLSADPHGCEDLAQETYLRALTGLSRFAGRSS  89
            AL A  GDR A+  FIRAT  DV+R++ HL++  +  +DL+QETYLR +++L+RFA+RSS
Sbjct  17   ALKAGRGDRAALTAFIRATQTDVWRLLAHLGG-TDIADDLTQETYLRVMSALPRFAARSS  75

Query  90   ARTWLLSIARRVVVDRYRMAAARPRTLEADDWQEVAERAQPVGLPGFDEGValmdllaal  149
            ARTWLLS+ARRV VD  R   ARPR   A+      E+ +    +   E V +  L+ AL
Sbjct  76   ARTWLLSLARRVWVDNIRHDMARPRKSAAE-----VEQCDGTTSSLWAEWVDVRMLIDAL  130

Query  150  apaRREMFLLTTVLGLPYADVATATGCPIGTVRSRV  185
            ++ RRE ++LT VLG++Y + A  ++  IGT+RSRV
Sbjct  131  PAERREALILTQVLGFSYEEAAKIADVRIGTIRSRV  166

112) SCM2.17c in NC_003888


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score = 92.0 bits (330),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 67/142 (48%), Positives = 103/142 (73%), Gaps = 6/142 (4%)

Query  31   FVRELQRDVRRYVAYLADDVQAADDLTQDTFLRALTALPRFEGRSSARVWLLSIARRAVV  90
            F+R  Q DV+R +A L++  + ADDLTQ+T+LR ++ALPRF +RSSAR WLLS+ARR  V
Sbjct  31   FIRATQTDVWRLLAHLGG-TDIADDLTQETYLRVMSALPRFAARSSARTWLLSLARRVWV  89

Query  91   DSLrraacrprtactDDWQAAAERAQPTGLPGFDEGIALWELVDSLPGERREAFVLTQLL  150
            D++R+   RPR + ++      E+ + T  +   E + ++ L+D+LP+ERREA++LTQ+L
Sbjct  90   DNIRHDMARPRKSAAE-----VEQCDGTTSSLWAEWVDVRMLIDALPAERREALILTQVL  144

Query  151  GLPYAEAAEMSRCPVGTVRSRV  172
            G++Y EAA ++   +GT+RSRV
Sbjct  145  GFSYEEAAKIADVRIGTIRSRV  166

113) B446_03440 in NC_021985


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score = 92.0 bits (330),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 72/158 (46%), Positives = 105/158 (67%), Gaps = 6/158 (3%)

Query  23   DESVTAWALAARGGDPDAVERFVRALHRDVRRYVAHLCADPQAVDDLAQDTFLRALGSLH  82
            D+ VTA AL A  GD  A+  F+RA + DV+R +AHL ++ +  DDL+Q+T+LR +++L 
Sbjct  10   DDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHL-GGTDIADDLTQETYLRVMSALP  68

Query  83   RFEGRSSARVWLLSIARRAVLDSYRHAAARPRLSDAPDWQAAVERAQTRGLPGFDEGVVL  142
            RF +RSSAR WLLS+ARR  +D+ RH  ARPR S      A VE+ +    +   E V +
Sbjct  69   RFAARSSARTWLLSLARRVWVDNIRHDMARPRKSA-----AEVEQCDGTTSSLWAEWVDV  123

Query  143  LDLLAALPGERREAFVLTQLAGLPYaaaaaaSGCPVGT  180
              L+ ALP+ERREA++LTQ+ G++Y  AA  ++  +GT
Sbjct  124  RMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGT  161

114) sigC in NC_017803


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score = 89.9 bits (322),  Expect = 1e-19, Method: Compositional matrix adjust.
 Identities = 64/145 (45%), Positives = 92/145 (64%), Gaps = 1/145 (0%)

Query  24   GDPVAQAAFVRATQTEVWRFTAALVDPGAADDLTQETFLRAFRALDSFQGRSTVRTWLLG  83
            GD  A +AF+RATQT+VWR+ A L + + ADDLTQET+LR   AL  F +RS+ RTWLL+
Sbjct  23   GDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLRVMSALPRFAARSSARTWLLS  82

Query  84   IARRACadhlravvrrrrldvrlaaqaateapapdpaHRMTSADLLSRLSDERRTAFVLT  143
            +ARR    +       R        +    + ++  A+++    L+  L+ ERR A++LT
Sbjct  83   LARRV-WVDNIRHDMARPRKSAAEVEQCDGTTSSLWAEWVDVRMLIDALPAERREALILT  141

Query  144  QVIGLSYAEAAEVEGVPVGTIRSRV  168
            QV+G+SY EAA + +V +GTIRSRV
Sbjct  142  QVLGFSYEEAAKIADVRIGTIRSRV  166

115) sigC2 in NC_016943


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score = 88.9 bits (318),  Expect = 2e-19, Method: Compositional matrix adjust.
 Identities = 71/140 (51%), Positives = 94/140 (68%), Gaps = 6/140 (4%)

Query  23   VRATQSDVWRLCATLGDRDAADDLTQETYLRAFGSLHRFEARSSVRTWLLTIArrvcada  82
            +RATQ+DVWRL A LG+ D ADDLTQETYLR  ++L RF ARSS RTWLL++ARRV  D 
Sbjct  32   IRATQTDVWRLLAHLGGTDIADDLTQETYLRVMSALPRFAARSSARTWLLSLARRVWVDN  91

Query  83   lrtrrrrrltlvrEAADLELLAPESGGDAV-AEGAAVTDLLGRLEPDRREAFALTQLLGL  141
            +R    R      E  +      ++   ++ AE   V  L++ L ++RREA+ LTQ+LG+
Sbjct  92   IRHDMARPRKSAAEVEQ-----CDGTTSSLWAEWVDVRMLIDALPAERREALILTQVLGF  146

Query  142  SYAEAAEVAGCPVGTIRSRV  161
            SY EAA +A+  +GTIRSRV
Sbjct  147  SYEEAAKIADVRIGTIRSRV  166

116) Gobs_1273 in NC_013757


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score = 87.3 bits (312),  Expect = 6e-19, Method: Compositional matrix adjust.
 Identities = 68/138 (50%), Positives = 97/138 (71%), Gaps = 4/138 (2%)

Query  24   RATQSDVWRLCAALGDRQSADDLTQETYLRAFGSLHRFEGRSSLRTWLLSIarrvcadav  83
            RATQ+DVWRL A LG+ + ADDLTQETYLR  ++L RF +RSS RTWLLS+ARRV  D +
Sbjct  33   RATQTDVWRLLAHLGGTDIADDLTQETYLRVMSALPRFAARSSARTWLLSLARRVWVDNI  92

Query  84   rsrrrrrltlvrEDADLEALGAGNDGDRVGEGAAVADLLARLSPDRREAFVLTQLLGLPY  143
            R    R      E  + ++  ++  +++V+    V  L+  L+++RREA++LTQ+LG++Y
Sbjct  93   RHDMARPRKSAAEVEQCDGTTSSLWAEWVD----VRMLIDALPAERREALILTQVLGFSY  148

Query  144  AEAAEVAGCPVGTIRSRV  161
             EAA +A+  +GTIRSRV
Sbjct  149  EEAAKIADVRIGTIRSRV  166

117) sig9 in NC_016582


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score = 85.2 bits (304),  Expect = 3e-18, Method: Compositional matrix adjust.
 Identities = 76/158 (49%), Positives = 108/158 (69%), Gaps = 8/158 (5%)

Query  22   ALAARGGDPEAVDRFVRATRRDVWRYVHRLSDDPHAADDLVQETYLRALRGLPRFEGRSS  81
            AL A  GD  A+  F+RAT+ DVWR + +L++  + ADDL QETYLR + +LPRF +RSS
Sbjct  17   ALKAGRGDRAALTAFIRATQTDVWRLLAHLGG-TDIADDLTQETYLRVMSALPRFAARSS  75

Query  82   ARTWLLSIARRAVVdrlrrnaarpraadtddWqaaaeraqrraaPDTGFDEGVALTQLLA  141
            ARTWLLS+ARR  VD +R++ ARPR       ++AAE  Q  ++  +   E V +  L+ 
Sbjct  76   ARTWLLSLARRVWVDNIRHDMARPR-------KSAAEVEQCDGTTSSLWAEWVDVRMLID  128

Query  142  LLPYDRREVFVLTQLLGLPYAEAALVVGCPVGTVRSRV  179
             LP +RRE ++LTQ+LG++Y EAA + +  +GT+RSRV
Sbjct  129  ALPAERREALILTQVLGFSYEEAAKIADVRIGTIRSRV  166

118) SHJG_8323 in NC_017765


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score = 84.2 bits (300),  Expect = 6e-18, Method: Compositional matrix adjust.
 Identities = 66/146 (46%), Positives = 98/146 (68%), Gaps = 6/146 (4%)

Query  32   RGDADAVEHFVRALHRDVQRYVAHLCADPQAVDDLAQDTFLRALGSLHRFEGRSSARAWL  91
            RGD  A+  F+RA + DV R +AHL ++ +  DDL+Q+T+LR +++L RF +RSSAR+WL
Sbjct  22   RGDRAALTAFIRATQTDVWRLLAHL-GGTDIADDLTQETYLRVMSALPRFAARSSARTWL  80

Query  92   LSIARRAVTDSHRRAAARPRLSDAADWQRAVESAQPRGLPgfddgialldllaglpaERR  151
            LS+ARR   D+ R+  ARPR S A      VE  +    +   + + +  L+ +LPAERR
Sbjct  81   LSLARRVWVDNIRHDMARPRKSAA-----EVEQCDGTTSSLWAEWVDVRMLIDALPAERR  135

Query  152  EAFVLTQLLGLPYAEAAEAGDCPVGT  177
            EA++LTQ+LG++Y EAA  +D  +GT
Sbjct  136  EALILTQVLGFSYEEAAKIADVRIGT  161

119) SHJGH_8084 in NC_020895


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score = 84.2 bits (300),  Expect = 6e-18, Method: Compositional matrix adjust.
 Identities = 66/146 (46%), Positives = 98/146 (68%), Gaps = 6/146 (4%)

Query  32   RGDADAVEHFVRALHRDVQRYVAHLCADPQAVDDLAQDTFLRALGSLHRFEGRSSARAWL  91
            RGD  A+  F+RA + DV R +AHL ++ +  DDL+Q+T+LR +++L RF +RSSAR+WL
Sbjct  22   RGDRAALTAFIRATQTDVWRLLAHL-GGTDIADDLTQETYLRVMSALPRFAARSSARTWL  80

Query  92   LSIARRAVTDSHRRAAARPRLSDAADWQRAVESAQPRGLPgfddgialldllaglpaERR  151
            LS+ARR   D+ R+  ARPR S A      VE  +    +   + + +  L+ +LPAERR
Sbjct  81   LSLARRVWVDNIRHDMARPRKSAA-----EVEQCDGTTSSLWAEWVDVRMLIDALPAERR  135

Query  152  EAFVLTQLLGLPYAEAAEAGDCPVGT  177
            EA++LTQ+LG++Y EAA  +D  +GT
Sbjct  136  EALILTQVLGFSYEEAAKIADVRIGT  161

120) SCM2.19c in NC_003888


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score = 83.1 bits (296),  Expect = 1e-17, Method: Compositional matrix adjust.
 Identities = 68/166 (41%), Positives = 104/166 (63%), Gaps = 8/166 (4%)

Query  19   TPEERTPADELVTAWALTARGGDPEAVERFVGALHRDVRRFVAYLSadpqaaddlaqdTF  78
             P ER   D+ VTA AL A  GD  A+  F+ A + DV+R++A L++   A D   + T+
Sbjct  4    KPSER--DDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQE-TY  60

Query  79   LRALGSLHRFEGRSSARVWLLSIARRAVIDNYRYASARPRLADVDDWQDAAERAQERGLP  138
            LR +++L RF +RSSAR WLLS+ARR  +DN R   ARPR +  +      E+ +    +
Sbjct  61   LRVMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAAE-----VEQCDGTTSS  115

Query  139  GFEDGIALADLLSALPAERREAFVLTQLVGLPYAEAAELSGCPVGT  184
               + + +  L+ ALPAERREA++LTQ++G++Y EAA +++  +GT
Sbjct  116  LWAEWVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGT  161

121) sigC in NC_016943


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score = 82.8 bits (295),  Expect = 1e-17, Method: Compositional matrix adjust.
 Identities = 69/138 (50%), Positives = 93/138 (68%), Gaps = 2/138 (1%)

Query  22   LVRATQSEVWRLCAVLGDRQSADDLTQETYLRAFAALHRFEGRSSLRTWLLSIARRVCAD  81
            ++RATQ++VWRL A LG+ + ADDLTQETYLR  +AL RF +RSS RTWLLS+ARRV  D
Sbjct  31   FIRATQTDVWRLLAHLGGTDIADDLTQETYLRVMSALPRFAARSSARTWLLSLARRVWVD  90

Query  82   AIRSRRRRPTLARGvepadaevpddadRVGEQaavrdllarldrdrrEAFVLTQLLGLPY  141
             IR    RP   ++    +      +   +E   VR L+  L  +RREA++LTQ+LG++Y
Sbjct  91   NIRHDMARPR--KSAAEVEQCDGTTSSLWAEWVDVRMLIDALPAERREALILTQVLGFSY  148

Query  142  AEAAEVVGCPVGTIRSRV  159
             EAA + +  +GTIRSRV
Sbjct  149  EEAAKIADVRIGTIRSRV  166

122) sigC in NC_020520


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score = 77.1 bits (273),  Expect = 8e-16, Method: Compositional matrix adjust.
 Identities = 72/160 (45%), Positives = 106/160 (67%), Gaps = 6/160 (3%)

Query  7    TTRLLLEAQAGDHDALARFIAATQVEVWNLCRYLGDARDADDLAQETYERAISSIHRFRA  66
             T L L A  GD+ AL+ FI ATQ +VW L   LG++  ADDL+QETY R +S++ RF A
Sbjct  13   VTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLRVMSALPRFAA  72

Query  67   DGSARSWILSIARHVCADHvrraqrrrardgrytatatagggvgsvvdaddtaRVdldll  126
             +SAR+W+LS+AR+V  D+       R   +R   +A+     ++   +  + +VD+ +L
Sbjct  73   RSSARTWLLSLARRVWVDN------IRHDMARPRKSAAEVEQCDGTTSSLWAEWVDVRML  126

Query  127  ldglssdRREAFVLTQVLGMSYEDAAESLGCPIGTIRSRV  166
            +D+L+++RREA++LTQVLG SYE+AA   +  IGTIRSRV
Sbjct  127  IDALPAERREALILTQVLGFSYEEAAKIADVRIGTIRSRV  166

123) sigC in NC_021191


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score = 76.8 bits (272),  Expect = 9e-16, Method: Compositional matrix adjust.
 Identities = 66/137 (49%), Positives = 94/137 (69%), Gaps = 2/137 (1%)

Query  26   VRGTQAEVWRFTAALVDPGAADDLTQETFLRAFKALPAFEARAGVRTWLLGIARRTCadh  85
            +R+TQ++VWR+ A L + + ADDLTQET+LR   ALP F AR++ RTWLL++ARR   D+
Sbjct  32   IRATQTDVWRLLAHLGGTDIADDLTQETYLRVMSALPRFAARSSARTWLLSLARRVWVDN  91

Query  86   lravvrrrrldarlaaQVWTDRPHHPDPAHRLGAADLLDRLSEERRTAFVLTQVLGLSYa  145
            +R  + R R  A    Q   D    +  A++++   L+D L+ ERR A++LTQVLG+SY 
Sbjct  92   IRHDMARPRKSAAEVEQC--DGTTSSLWAEWVDVRMLIDALPAERREALILTQVLGFSYE  149

Query  146  eaaeveevpvGTIRSRV  162
            EAA + +V +GTIRSRV
Sbjct  150  EAAKIADVRIGTIRSRV  166

124) rpoE in NC_022116


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score = 75.5 bits (267),  Expect = 2e-15, Method: Compositional matrix adjust.
 Identities = 76/138 (56%), Positives = 105/138 (77%), Gaps = 3/138 (2%)

Query  29   VSATQADIWRFlahltdtaaaddltQETYLRAFGSLRRFAGRSSSRTWLLSIARRVVVDQ  88
            + ATQ+D+WR+LAHL +T  ADDLTQETYLR  ++L RFA+RSS+RTWLLS+ARRV VD+
Sbjct  32   IRATQTDVWRLLAHLGGTDIADDLTQETYLRVMSALPRFAARSSARTWLLSLARRVWVDN  91

Query  89   IRAAGARPKIAATDWEAAAQRTPDPAAGFeelvelrllldglepdrreVLVLTQVLGLSY  148
            IR   ARP+ +A++     Q     ++   E V++R+L+D+L ++RRE L+LTQVLG+SY
Sbjct  92   IRHDMARPRKSAAE---VEQCDGTTSSLWAEWVDVRMLIDALPAERREALILTQVLGFSY  148

Query  149  AEAADVCGCPIGTVRSRV  166
             EAA + +  IGT+RSRV
Sbjct  149  EEAAKIADVRIGTIRSRV  166

125) RAM_15210 in NC_017186


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score = 75.5 bits (267),  Expect = 2e-15, Method: Compositional matrix adjust.
 Identities = 76/138 (56%), Positives = 105/138 (77%), Gaps = 3/138 (2%)

Query  29   VSATQADIWRFlahltdtaaaddltQETYLRAFGSLRRFAGRSSSRTWLLSIARRVVVDQ  88
            + ATQ+D+WR+LAHL +T  ADDLTQETYLR  ++L RFA+RSS+RTWLLS+ARRV VD+
Sbjct  32   IRATQTDVWRLLAHLGGTDIADDLTQETYLRVMSALPRFAARSSARTWLLSLARRVWVDN  91

Query  89   IRAAGARPKIAATDWEAAAQRTPDPAAGFeelvelrllldglepdrreVLVLTQVLGLSY  148
            IR   ARP+ +A++     Q     ++   E V++R+L+D+L ++RRE L+LTQVLG+SY
Sbjct  92   IRHDMARPRKSAAE---VEQCDGTTSSLWAEWVDVRMLIDALPAERREALILTQVLGFSY  148

Query  149  AEAADVCGCPIGTVRSRV  166
             EAA + +  IGT+RSRV
Sbjct  149  EEAAKIADVRIGTIRSRV  166

126) rpoE in NC_018266


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score = 75.5 bits (267),  Expect = 2e-15, Method: Compositional matrix adjust.
 Identities = 76/138 (56%), Positives = 105/138 (77%), Gaps = 3/138 (2%)

Query  29   VSATQADIWRFlahltdtaaaddltQETYLRAFGSLRRFAGRSSSRTWLLSIARRVVVDQ  88
            + ATQ+D+WR+LAHL +T  ADDLTQETYLR  ++L RFA+RSS+RTWLLS+ARRV VD+
Sbjct  32   IRATQTDVWRLLAHLGGTDIADDLTQETYLRVMSALPRFAARSSARTWLLSLARRVWVDN  91

Query  89   IRAAGARPKIAATDWEAAAQRTPDPAAGFeelvelrllldglepdrreVLVLTQVLGLSY  148
            IR   ARP+ +A++     Q     ++   E V++R+L+D+L ++RRE L+LTQVLG+SY
Sbjct  92   IRHDMARPRKSAAE---VEQCDGTTSSLWAEWVDVRMLIDALPAERREALILTQVLGFSY  148

Query  149  AEAADVCGCPIGTVRSRV  166
             EAA + +  IGT+RSRV
Sbjct  149  EEAAKIADVRIGTIRSRV  166

127) rpoE in NC_014318


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score = 75.5 bits (267),  Expect = 2e-15, Method: Compositional matrix adjust.
 Identities = 76/138 (56%), Positives = 105/138 (77%), Gaps = 3/138 (2%)

Query  29   VSATQADIWRFlahltdtaaaddltQETYLRAFGSLRRFAGRSSSRTWLLSIARRVVVDQ  88
            + ATQ+D+WR+LAHL +T  ADDLTQETYLR  ++L RFA+RSS+RTWLLS+ARRV VD+
Sbjct  32   IRATQTDVWRLLAHLGGTDIADDLTQETYLRVMSALPRFAARSSARTWLLSLARRVWVDN  91

Query  89   IRAAGARPKIAATDWEAAAQRTPDPAAGFeelvelrllldglepdrreVLVLTQVLGLSY  148
            IR   ARP+ +A++     Q     ++   E V++R+L+D+L ++RRE L+LTQVLG+SY
Sbjct  92   IRHDMARPRKSAAE---VEQCDGTTSSLWAEWVDVRMLIDALPAERREALILTQVLGFSY  148

Query  149  AEAADVCGCPIGTVRSRV  166
             EAA + +  IGT+RSRV
Sbjct  149  EEAAKIADVRIGTIRSRV  166

128) VAB18032_06790 in NC_015434


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score = 74.7 bits (264),  Expect = 4e-15, Method: Compositional matrix adjust.
 Identities = 75/138 (55%), Positives = 96/138 (70%), Gaps = 7/138 (5%)

Query  30   TQHDVHRFLAHLPGVRDVDDLVQETYLRAWRALPSFAGRSTARTWLLaiarrvavdqvra  89
            TQ DV R+LAHL G    DDL QETYLR   ALP FA+RS+ARTWLL++ARRV VD++R 
Sbjct  35   TQTDVWRLLAHLGGTDIADDLTQETYLRVMSALPRFAARSSARTWLLSLARRVWVDNIRH  94

Query  90   aaarprtanlaDWQAAAEATSAGVRAGVDDEVVLYRML-DGLTSDRREAFVATQLLGLSY  148
              ARPR +      AA      G  +++  E V  RML D+L ++RREA++ TQ+LG+SY
Sbjct  95   DMARPRKS------AAEVEQCDGTTSSLWAEWVDVRMLIDALPAERREALILTQVLGFSY  148

Query  149  AEAAQVCDVPVGTIRSRV  166
             EAA++ DV +GTIRSRV
Sbjct  149  EEAAKIADVRIGTIRSRV  166

129) sig10 in NC_003155


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score = 72.6 bits (256),  Expect = 2e-14, Method: Compositional matrix adjust.
 Identities = 67/162 (42%), Positives = 102/162 (63%), Gaps = 6/162 (3%)

Query  16   PASADESITAWALAARGGDPEAVERFVRALHRDVVRYVAHLSadpqaaddlaqdTFLRAL  75
            +   D+ +TA AL A  GD  A+  F+RA + DV R +AHL++   A D   + T+LR +
Sbjct  6    SERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQE-TYLRVM  64

Query  76   GSLHRFEGRSSARAWLMSIARRAVVDSFRHAAARPRLSDIPDWQLAVELAQPCdlpgldd  135
            ++L RF +RSSAR+WL+S+ARR  VD++RH  ARPR S        VE  +    +   +
Sbjct  65   SALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAA-----EVEQCDGTTSSLWAE  119

Query  136  gialldllavlpdERREAFVLTQLMGLPYAEAAEVSGCPIGT  177
             + +  L+  LP ERREA++LTQ++G++Y EAA +++  IGT
Sbjct  120  WVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGT  161

130) Psed_5845 in NC_015312


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score = 70.5 bits (248),  Expect = 7e-14, Method: Compositional matrix adjust.
 Identities = 63/137 (46%), Positives = 99/137 (73%), Gaps = 1/137 (0%)

Query  28   FVRATRDDVRGFLVHLAGADEADDLLQETYLRAVRSLPGFTGDGParawllaiarraaad  87
            F+RAT+ DV+ +L HL+G+D ADDL QETYLR + +LP F++ ++AR+WLL++ARR   D
Sbjct  31   FIRATQTDVWRLLAHLGGTDIADDLTQETYLRVMSALPRFAARSSARTWLLSLARRVWVD  90

Query  88   avrdavrrprtvavddWEAVNAPRGRASDEAVLVGALVDRLEPDRRDAFVLTQLLGLAYA  147
             +R+ + RPR  A +  E  ++  +    E V V  L+D L ++RR+A++LTQ+LG++Y 
Sbjct  91   NIRHDMARPRKSAAEV-EQCDGTTSSLWAEWVDVRMLIDALPAERREALILTQVLGFSYE  149

Query  148  DAAQVCGCPVGTIRSRV  164
            +AA++ +  +GTIRSRV
Sbjct  150  EAAKIADVRIGTIRSRV  166

131) sigC in NC_008611


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score = 69.4 bits (244),  Expect = 2e-13, Method: Compositional matrix adjust.
 Identities = 68/136 (50%), Positives = 101/136 (75%), Gaps = 3/136 (2%)

Query  31   IKATQQDVWRFVAYLSDAGSADDLTQETFLraigairrfggrssarTWLLAIARRVVADH  90
            I+ATQ DVWR++A L++++ ADDLTQET+LR ++A+ RF++RSSARTWLL++ARRV  D+
Sbjct  32   IRATQTDVWRLLAHLGGTDIADDLTQETYLRVMSALPRFAARSSARTWLLSLARRVWVDN  91

Query  91   IRHLQARPRAAHGVDPELLLDRGRRARGFEDLVEVTTMIAQLTSDQREAllltqllglSY  150
            IRH  ARPR +    +E+    G  +    + V+V  +I  L +++REAL+LTQ+LG+SY
Sbjct  92   IRHDMARPRKS---AAEVEQCDGTTSSLWAEWVDVRMLIDALPAERREALILTQVLGFSY  148

Query  151  TDAAAVCGCPVGTIRS  166
             +AA + +  +GTIRS
Sbjct  149  EEAAKIADVRIGTIRS  164

132) sigC in NC_020133


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score = 69.2 bits (243),  Expect = 2e-13, Method: Compositional matrix adjust.
 Identities = 68/136 (50%), Positives = 101/136 (75%), Gaps = 3/136 (2%)

Query  29   IKATQQDVWRFVAYLSDAGSADDLTQETFLraigairrfggrssarTWLLAIARRVVADH  88
            I+ATQ DVWR++A L++++ ADDLTQET+LR ++A+ RF++RSSARTWLL++ARRV  D+
Sbjct  32   IRATQTDVWRLLAHLGGTDIADDLTQETYLRVMSALPRFAARSSARTWLLSLARRVWVDN  91

Query  89   IRHLQARPRAAHGVDPELLLDRGRRARGFEDLVEVTTMIAQLTSDQREAllltqllglSY  148
            IRH  ARPR +    +E+    G  +    + V+V  +I  L +++REAL+LTQ+LG+SY
Sbjct  92   IRHDMARPRKS---AAEVEQCDGTTSSLWAEWVDVRMLIDALPAERREALILTQVLGFSY  148

Query  149  TDAAAVCGCPVGTIRS  164
             +AA + +  +GTIRS
Sbjct  149  EEAAKIADVRIGTIRS  164

133) sigC in NC_010612


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score = 69.2 bits (243),  Expect = 2e-13, Method: Compositional matrix adjust.
 Identities = 68/136 (50%), Positives = 101/136 (75%), Gaps = 3/136 (2%)

Query  29   IKATQQDVWRFVAYLSDAGSADDLTQETFLraigairrfggrssarTWLLAIARRVVADH  88
            I+ATQ DVWR++A L++++ ADDLTQET+LR ++A+ RF++RSSARTWLL++ARRV  D+
Sbjct  32   IRATQTDVWRLLAHLGGTDIADDLTQETYLRVMSALPRFAARSSARTWLLSLARRVWVDN  91

Query  89   IRHLQARPRAAHGVDPELLLDRGRRARGFEDLVEVTTMIAQLTSDQREAllltqllglSY  148
            IRH  ARPR +    +E+    G  +    + V+V  +I  L +++REAL+LTQ+LG+SY
Sbjct  92   IRHDMARPRKS---AAEVEQCDGTTSSLWAEWVDVRMLIDALPAERREALILTQVLGFSY  148

Query  149  TDAAAVCGCPVGTIRS  164
             +AA + +  +GTIRS
Sbjct  149  EEAAKIADVRIGTIRS  164

134) Micau_3015 in NC_014391


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score = 68.4 bits (240),  Expect = 3e-13, Method: Compositional matrix adjust.
 Identities = 60/145 (42%), Positives = 86/145 (60%), Gaps = 30/145 (20%)

Query  35   VWRFLAHLAGPAEADDLAQETFLRALRSLPGFAGRSSART---------WIFTIarrvav  85
            VWR+LAHL+G   ADDL+QET+LR + +LP FA+RSSART         W+  I + +A 
Sbjct  39   VWRLLAHLGGTDIADDLTQETYLRVMSALPRFAARSSARTWLLSLARRVWVDNIRHDMAR  98

Query  86   dhvraatarp---rvaaL-PDWQaaaeaagavtgggedgvvLRGLIATLAPDRREAFVAT  141
             +  AA         ++L ++W                 V +R LI +L+++RREA++ T
Sbjct  99   PRKSAAEVEQCDGTTSSLWAEW-----------------VDVRMLIDALPAERREALILT  141

Query  142  QVLGLSYAEAAEVCGCPVGTIRSRV  166
            QVLG+SY EAA + +  +GTIRSRV
Sbjct  142  QVLGFSYEEAAKIADVRIGTIRSRV  166

135) ML5_5372 in NC_014815


> NC_016783_P1|9|G9|375292177|YP_005126716.1|Corynebacterium_diphtheriae_INCA_402|-|10425..10991|sigC|CDB402_0203|ECF-family 
sigma factor C
Length=188

 Score = 67.3 bits (236),  Expect = 7e-13, Method: Compositional matrix adjust.
 Identities = 59/145 (41%), Positives = 85/145 (59%), Gaps = 30/145 (20%)

Query  35   VWRFLAHLAGPAEADDLAQETFLRALRSLPGFAGRSSART---------WIFTIarrvav  85
            VWR+LAHL+G   ADDL+QET+LR + +LP FA+RSSART         W+  I + +A 
Sbjct  39   VWRLLAHLGGTDIADDLTQETYLRVMSALPRFAARSSARTWLLSLARRVWVDNIRHDMAR  98

Query  86   dhvraatarp---rvaaL-PDWQaaaeaagavtgggedgvvLRGLIATLAPDRRAAFVAT  141
             +  AA         ++L ++W                 V +R LI +L+++RR A++ T
Sbjct  99   PRKSAAEVEQCDGTTSSLWAEW-----------------VDVRMLIDALPAERREALILT  141

Query  142  QVLGLSYAEAAEVCGCPVGTIRSRV  166
            QVLG+SY EAA + +  +GTIRSRV
Sbjct  142  QVLGFSYEEAAKIADVRIGTIRSRV  166