Homolog Viewer

PAthogenisity Island DataBase (PAI DB)

Home PAIs REIs Genomes Search Links

Homologs of smi_1697 gene of NC_013853_P1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) smi_1697
( YP_003446799.1 )

AraC family transcriptional regulator

NC_013853
(Streptococcus mitis B6)

4e-146

100

2) CLS_04630
( YP_007848283.1 )

transcriptional regulator, AraC family

NC_021047
(Clostridium saccharolyticum K10)

7e-92

• Sequence Alignments

1) smi_1697 in NC_013853


> NC_013853_P1|9|G9|289168530|YP_003446799.1|Streptococcus_mitis_B6|+|6753..7712|-|smi_1697|AraC 
family transcriptional regulator
Length=319

 Score =  510 bits (1925),  Expect = 4e-146, Method: Compositional matrix adjust.
 Identities = 319/319 (100%), Positives = 319/319 (100%), Gaps = 0/319 (0%)

Query  1    MIGMDNRFNKSWYGDKAQLVDSDNDCVIIDYGCKGKGIITSYNLYDGITLCFLDFYTDEI  60
            MIGMDNRFNKSWYGDKAQLVDSDNDCVIIDYGCKGKGIITSYNLYDGITLCFLDFYTDEI
Sbjct  1    MIGMDNRFNKSWYGDKAQLVDSDNDCVIIDYGCKGKGIITSYNLYDGITLCFLDFYTDEI  60

Query  61   MPSQKFNPDIISIVHCQAGRYECEFSNHQMFYLSEGYFSIMGTKHLPISFSFPLKKCYAF  120
            MPSQKFNPDIISIVHCQAGRYECEFSNHQMFYLSEGYFSIMGTKHLPISFSFPLKKCYAF
Sbjct  61   MPSQKFNPDIISIVHCQAGRYECEFSNHQMFYLSEGYFSIMGTKHLPISFSFPLKKCYAF  120

Query  121  SLVIDKHALSADTQKILNDFCLDMDKISERLKLNKNGYLSHADFELGHLFEEFYNAKDKE  180
            SLVIDKHALSADTQKILNDFCLDMDKISERLKLNKNGYLSHADFELGHLFEEFYNAKDKE
Sbjct  121  SLVIDKHALSADTQKILNDFCLDMDKISERLKLNKNGYLSHADFELGHLFEEFYNAKDKE  180

Query  181  SITYFRVKAIEFLYFINKLSGNEETEFRYFNKKYIQITKDVCKYMTEHLEEKVSLEQLAY  240
            SITYFRVKAIEFLYFINKLSGNEETEFRYFNKKYIQITKDVCKYMTEHLEEKVSLEQLAY
Sbjct  181  SITYFRVKAIEFLYFINKLSGNEETEFRYFNKKYIQITKDVCKYMTEHLEEKVSLEQLAY  240

Query  241  EKGINLSLLYKVFAQVYGDTPYSYIKKYKMNIASNELRNSKRKINDIALSLGYSNASKFS  300
            EKGINLSLLYKVFAQVYGDTPYSYIKKYKMNIASNELRNSKRKINDIALSLGYSNASKFS
Sbjct  241  EKGINLSLLYKVFAQVYGDTPYSYIKKYKMNIASNELRNSKRKINDIALSLGYSNASKFS  300

Query  301  IAFQSVYGILPKDYRKAEN  319
            IAFQSVYGILPKDYRKAEN
Sbjct  301  IAFQSVYGILPKDYRKAEN  319

2) CLS_04630 in NC_021047


> NC_013853_P1|9|G9|289168530|YP_003446799.1|Streptococcus_mitis_B6|+|6753..7712|-|smi_1697|AraC 
family transcriptional regulator
Length=319

 Score =  330 bits (1238),  Expect = 7e-92, Method: Compositional matrix adjust.
 Identities = 174/313 (56%), Positives = 248/313 (80%), Gaps = 0/313 (0%)

Query  3    GKNFRQEWYGSQAKIMEQTRDCVVVDYGCNGRGIVKNYNLFEGIQFCFLDFETDGAMKAQ  62
            ++ F + WYG +A++++   DCV++DYGC+G+GI+ +YNL++GI +CFLDF TD  M +Q
Sbjct  5    DNRFNKSWYGDKAQLVDSDNDCVIIDYGCKGKGIITSYNLYDGITLCFLDFYTDEIMPSQ  64

Query  63   KFNPDIIQITHCQTGRYECEFANHTVSYLPEGYFSVAATEHLPVSFSFPLRKYYGVSLVI  122
            KFNPDII I HCQ+GRYECEF+NH + YL+EGYFS+ +T HLP+SFSFPL+K Y+ SLVI
Sbjct  65   KFNPDIISIVHCQAGRYECEFSNHQMFYLSEGYFSIMGTKHLPISFSFPLKKCYAFSLVI  124

Query  123  DRQVLSDATRRMMQTIPIDLDKIGTTLGLETRWYVSDTPPQLQHLFSELYTAVDTEPIGY  182
            D++ LS  T+++++ + +D+DKI+  L L+   Y+S++  +L HLF E+Y A D E+I Y
Sbjct  125  DKHALSADTQKILNDFCLDMDKISERLKLNKNGYLSHADFELGHLFEEFYNAKDKESITY  184

Query  183  FKIKAIELLYHMDQLTQINGCDLKYFDKKQIQTTKAIREYLISHLDEKVSLEQLAKEAHL  242
            F++KAIE+LY +++L+  +  +++YF+KK IQ TK +  Y+  HL+EKVSLEQLA E  +
Sbjct  185  FRVKAIEFLYFINKLSGNEETEFRYFNKKYIQITKDVCKYMTEHLEEKVSLEQLAYEKGI  244

Query  243  NLSVFHLVFSHIYGDTPYAYLKKYKMNLAAQWLSEHKMKIGDIALELGYSNASKFAKAFQ  302
            NLS++  VF+++YGDTPY+Y+KKYKMN+A++ L + K KI DIAL LGYSNASKF+ AFQ
Sbjct  245  NLSLLYKVFAQVYGDTPYSYIKKYKMNIASNELRNSKRKINDIALSLGYSNASKFSIAFQ  304

Query  303  SVYGVLPKDYRKN  315
            SVYG+LPKDYRK 
Sbjct  305  SVYGILPKDYRKA  317