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Homologs of CPR_0633 gene of NC_008262_P3

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) CPR_0633
( YP_697960.1 )

replication protein

NC_008262
(Clostridium perfringens SM101)

4e-152

100

2) CPR_B0010
( YP_699929.1 )

replication protein

NC_008264
(Clostridium perfringens SM101)

4e-142

3) ctp45
( NP_783816.1 )

putative replication protein

NC_004565
(Clostridium tetani E88)

5e-55

4) ctp1
( NP_783730.1 )

putative replication protein

NC_004565
(Clostridium tetani E88)

1e-52

5) CBF_P0022
( YP_005676578.1 )

replication protein

NC_017298
(Clostridium botulinum 230613)

2e-52

6) CLI_A0021
( YP_001393025.1 )

replication protein

NC_009700
(Clostridium botulinum Langeland)

2e-52

7) CLL_0045
( YP_001893666.1 )

replication protein

NC_010680
(Clostridium botulinum Eklund 17B)

4e-46

• Sequence Alignments

1) CPR_0633 in NC_008262


> NC_008262_P3|9|G9|110803247|YP_697960.1|Clostridium_perfringens_SM101|+|8769..9875|-|CPR_0633|replication 
protein
Length=368

 Score =  530 bits (2001),  Expect = 4e-152, Method: Compositional matrix adjust.
 Identities = 348/348 (100%), Positives = 348/348 (100%), Gaps = 0/348 (0%)

Query  1    MRNALQVNNVSYIDNLHSNSKGWITRSVIDKKGYRQWHYKYAELKDLDISGENIYITLNT  60
            MRNALQVNNVSYIDNLHSNSKGWITRSVIDKKGYRQWHYKYAELKDLDISGENIYITLNT
Sbjct  1    MRNALQVNNVSYIDNLHSNSKGWITRSVIDKKGYRQWHYKYAELKDLDISGENIYITLNT  60

Query  61   FYKPCRRLENIKELNTLFIDLDYYKTGKTKDQVLMDLEKNYFNQSIPIPNYVIDSGRGMY  120
            FYKPCRRLENIKELNTLFIDLDYYKTGKTKDQVLMDLEKNYFNQSIPIPNYVIDSGRGMY
Sbjct  61   FYKPCRRLENIKELNTLFIDLDYYKTGKTKDQVLMDLEKNYFNQSIPIPNYVIDSGRGMY  120

Query  121  LIWRINSVPSKALPLWKAVQDYLYKQLKCFGADRQALDATRILRVPGSINSKSKTVVNIL  180
            LIWRINSVPSKALPLWKAVQDYLYKQLKCFGADRQALDATRILRVPGSINSKSKTVVNIL
Sbjct  121  LIWRINSVPSKALPLWKAVQDYLYKQLKCFGADRQALDATRILRVPGSINSKSKTVVNIL  180

Query  181  DEYEYIYDLREIQNGFLPELKPYEKKKGRPSKINYIYRERSLYYGRIQDIIKLCELREYD  240
            DEYEYIYDLREIQNGFLPELKPYEKKKGRPSKINYIYRERSLYYGRIQDIIKLCELREYD
Sbjct  181  DEYEYIYDLREIQNGFLPELKPYEKKKGRPSKINYIYRERSLYYGRIQDIIKLCELREYD  240

Query  241  LKGHRELILFLYRYYLCSFTEDIEKALNDVLELNSMFRQHLSEREVIRATRSAERCYLDK  300
            LKGHRELILFLYRYYLCSFTEDIEKALNDVLELNSMFRQHLSEREVIRATRSAERCYLDK
Sbjct  241  LKGHRELILFLYRYYLCSFTEDIEKALNDVLELNSMFRQHLSEREVIRATRSAERCYLDK  300

Query  301  NKQYKYKNetlielleiteeeQKYMTIIISKKEYKRRENIRGKKLPRA  348
            NKQYKYKNETLIELLEITEEEQKYMTIIISKKEYKRRENIRGKKLPRA
Sbjct  301  NKQYKYKNETLIELLEITEEEQKYMTIIISKKEYKRRENIRGKKLPRA  348

2) CPR_B0010 in NC_008264


> NC_008262_P3|9|G9|110803247|YP_697960.1|Clostridium_perfringens_SM101|+|8769..9875|-|CPR_0633|replication 
protein
Length=368

 Score =  497 bits (1875),  Expect = 4e-142, Method: Compositional matrix adjust.
 Identities = 324/344 (95%), Positives = 336/344 (98%), Gaps = 0/344 (0%)

Query  1    MEYALKLNKINYIDNVHSNSKGWITRSVIDKKGYSQWHYKYAELKDLDMSGENIYITLNT  60
            M  AL++N+++YIDN+HSNSKGWITRSVIDKKGY QWHYKYAELKDLD+SGENIYITLNT
Sbjct  1    MRNALQVNNVSYIDNLHSNSKGWITRSVIDKKGYRQWHYKYAELKDLDISGENIYITLNT  60

Query  61   FYKPCRRLENIKELNTLFIDLDYYKTCKTKDQVLMDLEKNYFNQSIPIPNYVIDSGRGMY  120
            FYKPCRRLENIKELNTLFIDLDYYKT KTKDQVLMDLEKNYFNQSIPIPNYVIDSGRGMY
Sbjct  61   FYKPCRRLENIKELNTLFIDLDYYKTGKTKDQVLMDLEKNYFNQSIPIPNYVIDSGRGMY  120

Query  121  LIWIINAVPSKALPLWKAVQEYLYNQLKYFGADRQALDATRILRVPGSINSKSKTVVNIL  180
            LIW IN+VPSKALPLWKAVQ+YLY+QLK FGADRQALDATRILRVPGSINSKSKTVVNIL
Sbjct  121  LIWRINSVPSKALPLWKAVQDYLYKQLKCFGADRQALDATRILRVPGSINSKSKTVVNIL  180

Query  181  DEYEYIYDLREIQNGFLPELKPYEKKKGRPSKINYIYRERSLYYGRIQDIIKLCELREYD  240
            DEYEYIYDLREIQNGFLPELKPYEKKKGRPSKINYIYRERSLYYGRIQDIIKLCELREYD
Sbjct  181  DEYEYIYDLREIQNGFLPELKPYEKKKGRPSKINYIYRERSLYYGRIQDIIKLCELREYD  240

Query  241  LKGHRELILFLYRYYLCSFTEDIQKALEDALELNSMFRQALSEREVIRATRSAERCYLDK  300
            LKGHRELILFLYRYYLCSFTEDI+KAL+D LELNSMFRQ LSEREVIRATRSAERCYLDK
Sbjct  241  LKGHRELILFLYRYYLCSFTEDIEKALNDVLELNSMFRQHLSEREVIRATRSAERCYLDK  300

Query  301  NKQYKYKNetlielleiteeeQKYMTIIISKKEYKRRENIRGKK  344
            NKQYKYKNETLIELLEITEEEQKYMTIIISKKEYKRRENIRGKK
Sbjct  301  NKQYKYKNETLIELLEITEEEQKYMTIIISKKEYKRRENIRGKK  344

3) ctp45 in NC_004565


> NC_008262_P3|9|G9|110803247|YP_697960.1|Clostridium_perfringens_SM101|+|8769..9875|-|CPR_0633|replication 
protein
Length=368

 Score =  208 bits (775),  Expect = 5e-55, Method: Compositional matrix adjust.
 Identities = 157/387 (41%), Positives = 250/387 (65%), Gaps = 34/387 (8%)

Query  32   NIQKATFHMDTLHKGDDGYITIAIKHNNDWSQYHYKIEELKENVGKVLSIDGVNIYLSPN  91
            ++++ ++ +D LH    G IT ++ ++++  Q HYK  ELK+     L I G NIY++ N
Sbjct  6    QVNNVSY-IDNLHSNSKGWITRSVIDKKGYRQWHYKYAELKD-----LDISGENIYITLN  59

Query  92   SFYKPIRRIENVRKLNSLYIDLDYYTLDKFKDLTVDQILWNLEADYFKSKVPEANFIVIT  151
            +FYKP RR+EN++ LN+L+IDLDYY  +K    T DQ+L +LE +YF+  +P +N+++ +
Sbjct  60   TFYKPCRRLENIKELNTLFIDLDYYKTGK----TKDQVLMDLEKNYFNQSIPIPNYVIDS  115

Query  152  GRGLAIYWLIEAVPYKALPLWNAVQKNFLNKLKEIGADEKSIDAARVMRLSGSVNQKNGH  211
            GRG+ + W I++VP KALPLW+AVQ  + ++LK +GAD +++DA+R++R++GS+N K+  
Sbjct  116  GRGMYLIWRINSVPSKALPLWKAVQDYLYKQLKCFGADRQALDATRILRVPGSINSKSKT  175

Query  212  AVDLLFYNDNKYNLRDIQENYLPDLTPYVKNPYHKAKGRRKKVVNLFNLYSLHYARLRDL  271
             V++L   +  Y+LR+IQ+ +LP+L     +PY+K KGR  K+  ++   SL Y+R++D+
Sbjct  176  VVNILDEYEYIYDLREIQNGFLPEL-----KPYEKKKGRPSKINYIYRERSLYYGRIQDI  230

Query  272  VKLMELREGMCRMEDGSLKATGLRELMCFLYRYWSSCYERDTENALQSTLDFNKQFREPL  331
            +KL       C + +  LK  G REL+ FLYRY    +  D E+AL+  L++N  FR+ L
Sbjct  231  IKL-------CELREYDLK--GHRELILFLYRYYLCSFTEDIEKALNDVLELNSMFRQHL  281

Query  332  NISEVEKATNSAQKAYKAWLKDCPTGTYSRGGYNYKNKTLIKLLNITEDEMKVLETIIDN  391
            +  EV +AT SA++ Y                Y+YKN TLI LL+ITE+E K +  II +
Sbjct  282  SEREVIRATRSAERCYLD----------KNKQYKYKNETLIELLEITEEEQKYMTIIISK  331

Query  392  KEVKRRTNIRTNKHHKAKRRNEKGLTK  418
            KE KRR NIR +K  +A + + K+  K
Sbjct  332  KEYKRRENIRGKKLPRAIKSSRKSNKK  358

4) ctp1 in NC_004565


> NC_008262_P3|9|G9|110803247|YP_697960.1|Clostridium_perfringens_SM101|+|8769..9875|-|CPR_0633|replication 
protein
Length=368

 Score =  200 bits (744),  Expect = 1e-52, Method: Compositional matrix adjust.
 Identities = 151/359 (43%), Positives = 235/359 (66%), Gaps = 33/359 (9%)

Query  40   MDTLHKGDDGYITIAIKHNNDWAQHHYKIEELKDNVGKVLSIDGVNIYLSPNSFYKPIRR  99
            +D LH    G IT ++ ++++  Q HYK  ELKD     L I G NIY++ N+FYKP RR
Sbjct  13   IDNLHSNSKGWITRSVIDKKGYRQWHYKYAELKD-----LDISGENIYITLNTFYKPCRR  67

Query  100  IENVRKLNSLYIDLDYYTLDKFKDLTVDQILWNLEADYFKSKVPEANFIVITGRGLAIYW  159
            +EN++ LN+L+IDLDYY  +K    T DQ+L +LE +YF+  +P +N+++ +GRG+ + W
Sbjct  68   LENIKELNTLFIDLDYYKTGK----TKDQVLMDLEKNYFNQSIPIPNYVIDSGRGMYLIW  123

Query  160  LIEAVPYKALPLWNAVQKNFLNKLKDIGADEKSIDAARVMRLSGSVNQKNGHAVDLLFYN  219
             I++VP KALPLW+AVQ  + ++LK +GAD +++DA+R++R++GS+N K+   V++L   
Sbjct  124  RINSVPSKALPLWKAVQDYLYKQLKCFGADRQALDATRILRVPGSINSKSKTVVNILDEY  183

Query  220  DNKYNLRDIQENYLPDLTPYVKNPYHKAKGRRKRVVNLFNLYSLHYARLRDLVKLMELRE  279
            +  Y+LR+IQ+ +LP+L     +PY+K KGR  ++  ++   SL Y+R++D++KL     
Sbjct  184  EYIYDLREIQNGFLPEL-----KPYEKKKGRPSKINYIYRERSLYYGRIQDIIKL-----  233

Query  280  GMCRMEDGSLKATGLREFMCFLYRYWSSCYEGDIENALKSTLDFNKQFKEPLSIGEVERA  339
              C + +  LK  G RE++ FLYRY    +  DIE+AL+  L++N  F++ LS  EV RA
Sbjct  234  --CELREYDLK--GHRELILFLYRYYLCSFTEDIEKALNDVLELNSMFRQHLSEREVIRA  289

Query  340  TKSATKAYKQWLKDCPTGTYSRGGYNYKNKTLIKLLNITEDEMKVLETIIDNKEVKRRD  398
            T+SA + Y +              Y+YKN TLI LL+ITE+E K +  II +KE KRR+
Sbjct  290  TRSAERCYLD----------KNKQYKYKNETLIELLEITEEEQKYMTIIISKKEYKRRE  338

5) CBF_P0022 in NC_017298


> NC_008262_P3|9|G9|110803247|YP_697960.1|Clostridium_perfringens_SM101|+|8769..9875|-|CPR_0633|replication 
protein
Length=368

 Score =  200 bits (742),  Expect = 2e-52, Method: Compositional matrix adjust.
 Identities = 164/376 (44%), Positives = 241/376 (65%), Gaps = 33/376 (8%)

Query  41   IELLHEKDDGFITIAVKKQNKWMQYHYSKDELKDNIGKILSIEGINVYLSANSFYKPFRR  100
            I+ LH +  G IT +V  ++   Q HY   ELKD     L I G N+Y++ N+FYKP RR
Sbjct  13   IDNLHSNSKGWITRSVIDKKGYRQWHYKYAELKD-----LDISGENIYITLNTFYKPCRR  67

Query  101  IENIRKLNSLYIDLDYYSLKNFKNLTTDQIIWQLECDYFREKVPEANFIILTGRGIAIYW  160
            +ENI+ LN+L+IDLDYY   +    T DQ++ +LE +YF + +P +N++I +GRG+ + W
Sbjct  68   LENIKELNTLFIDLDYYKTGK----TKDQVLMDLEKNYFNQSIPIPNYVIDSGRGMYLIW  123

Query  161  LIEPVPYKALPLWNAVQKHFLKELKDIGADEKSIDSSRVMRLAGSINQKSGKNADILVYS  220
             I++VP KALPLW+AVQ  + K+LK +GAD +++D++R++R++GSIN KS    +IL   
Sbjct  124  RINSVPSKALPLWKAVQDYLYKQLKCFGADRQALDATRILRVPGSINSKSKTVVNILDEY  183

Query  221  EDRYILREIQEEYLPELTPYVKNPYYKSKGRNPKIVNFFTLYSLHYARLRDIVTLQKIRE  280
            E  Y LREIQ+ +LPEL PY K+     KGR +KI  ++   SL Y+R++DI+ L     
Sbjct  184  EYIYDLREIQNGFLPELKPYEKK-----KGRPSKINYIYRERSLYYGRIQDIIKL-----  233

Query  281  GYCKNKEGSLVKSGQREFMCFLYRYWSCCYEANKEKALENTIDFNKEFKVPLEYKEVERA  340
              C  +E  L   G+RE++ FLYRY  C +  + EKAL++ +++N  F+  L  +EV RA
Sbjct  234  --CELREYDL--KGHRELILFLYRYYLCSFTEDIEKALNDVLELNSMFRQHLSEREVIRA  289

Query  341  TRSAEKAYEAWFKDSPSGTYKRGGYNYKNETLIEKLNITDEEMKTLETIIGKKEVKRRDN  400
            TRSAE+ Y            K   Y+YKNETLIE L+IT+EE K +  II+KKE KRR+N
Sbjct  290  TRSAERCYLD----------KNKQYKYKNETLIELLEITEEEQKYMTIIISKKEYKRREN  339

Query  401  QKNKIRQKAKRRNEKG  416
             + K   +A + + K+
Sbjct  340  IRGKKLPRAIKSSRKS  355

6) CLI_A0021 in NC_009700


> NC_008262_P3|9|G9|110803247|YP_697960.1|Clostridium_perfringens_SM101|+|8769..9875|-|CPR_0633|replication 
protein
Length=368

 Score =  200 bits (742),  Expect = 2e-52, Method: Compositional matrix adjust.
 Identities = 164/376 (44%), Positives = 241/376 (65%), Gaps = 33/376 (8%)

Query  41   IELLHEKDDGFITIAVKKQNKWMQYHYSKDELKDNIGKILSIEGINVYLSANSFYKPFRR  100
            I+ LH +  G IT +V  ++   Q HY   ELKD     L I G N+Y++ N+FYKP RR
Sbjct  13   IDNLHSNSKGWITRSVIDKKGYRQWHYKYAELKD-----LDISGENIYITLNTFYKPCRR  67

Query  101  IENIRKLNSLYIDLDYYSLKNFKNLTTDQIIWQLECDYFREKVPEANFIILTGRGIAIYW  160
            +ENI+ LN+L+IDLDYY   +    T DQ++ +LE +YF + +P +N++I +GRG+ + W
Sbjct  68   LENIKELNTLFIDLDYYKTGK----TKDQVLMDLEKNYFNQSIPIPNYVIDSGRGMYLIW  123

Query  161  LIEPVPYKALPLWNAVQKHFLKELKDIGADEKSIDSSRVMRLAGSINQKSGKNADILVYS  220
             I++VP KALPLW+AVQ  + K+LK +GAD +++D++R++R++GSIN KS    +IL   
Sbjct  124  RINSVPSKALPLWKAVQDYLYKQLKCFGADRQALDATRILRVPGSINSKSKTVVNILDEY  183

Query  221  EDRYILREIQEEYLPELTPYVKNPYYKSKGRNPKIVNFFTLYSLHYARLRDIVTLQKIRE  280
            E  Y LREIQ+ +LPEL PY K+     KGR +KI  ++   SL Y+R++DI+ L     
Sbjct  184  EYIYDLREIQNGFLPELKPYEKK-----KGRPSKINYIYRERSLYYGRIQDIIKL-----  233

Query  281  GYCKNKEGSLVKSGQREFMCFLYRYWSCCYEANKEKALENTIDFNKEFKVPLEYKEVERA  340
              C  +E  L   G+RE++ FLYRY  C +  + EKAL++ +++N  F+  L  +EV RA
Sbjct  234  --CELREYDL--KGHRELILFLYRYYLCSFTEDIEKALNDVLELNSMFRQHLSEREVIRA  289

Query  341  TRSAEKAYEAWFKDSPSGTYKRGGYNYKNETLIEKLNITDEEMKTLETIIGKKEVKRRDN  400
            TRSAE+ Y            K   Y+YKNETLIE L+IT+EE K +  II+KKE KRR+N
Sbjct  290  TRSAERCYLD----------KNKQYKYKNETLIELLEITEEEQKYMTIIISKKEYKRREN  339

Query  401  QKNKIRQKAKRRNEKG  416
             + K   +A + + K+
Sbjct  340  IRGKKLPRAIKSSRKS  355

7) CLL_0045 in NC_010680


> NC_008262_P3|9|G9|110803247|YP_697960.1|Clostridium_perfringens_SM101|+|8769..9875|-|CPR_0633|replication 
protein
Length=368

 Score =  179 bits (663),  Expect = 4e-46, Method: Compositional matrix adjust.
 Identities = 154/338 (46%), Positives = 228/338 (68%), Gaps = 19/338 (5%)

Query  26   RKGFKGIYQRHYKKQDLEEALDVFFSGGYNNELYISMNTFLKPNRTSENLRYLNALYIDI  85
            +KG++   Q+HYK  +L + LD+  SG   +++YI++NTF KP R  EN++ LN+L+ID+
Sbjct  31   KKGYR---QWHYKYAELKD-LDI--SG---ENIYITLNTFYKPCRRLENIKELNTLFIDL  81

Query  86   DCYKLNIRKESVLFFLENDFYNKIIPEPSVVVDSGRGLYLVWFIEPVPSRALTLWRAMQY  145
            D YK    K+ VL  LE++++N+ IP P+ V+DSGRG+YL+W I++VPS+AL LW+A+Q 
Sbjct  82   DYYKTGKTKDQVLMDLEKNYFNQSIPIPNYVIDSGRGMYLIWRINSVPSKALPLWKAVQD  141

Query  146  YLYSALKEFGADRAALDESRVLRVVGSYNSKSDSYVKIVDFNNFRYTLKDLKSEYLPEik  205
            YLY  LK FGADR ALD +R+LRV GS NSKS + V+I+D  ++ Y L+++++ +LPE  
Sbjct  142  YLYKQLKCFGADRQALDATRILRVPGSINSKSKTVVNILDEYEYIYDLREIQNGFLPE--  199

Query  206  kedkkikkkrksnkihiFNFYGLHKSRMEDIYKLVQLRSYDMKGKRELILFLYRYY-ATL  264
                  KK R S+   I+   +L  +R++DI KL +LR YD+KG RELILFLYRYY  ++
Sbjct  200  LKPYEKKKGRPSKINYIYRERSLYYGRIQDIIKLCELREYDLKGHRELILFLYRYYLCSF  259

Query  265  VEGETVAEEMTLELNESFIEPLPLNEI----NSTKSNYIGK---YNYKNKTLVELLEISL  317
             E+   A +  LELN  F + L+  E+     S+   Y++K   Y+YKN TL+ELLEI+ 
Sbjct  260  TEDIEKALNDVLELNSMFRQHLSEREVIRATRSAERCYLDKNKQYKYKNETLIELLEITE  319

Query  318  EEMKHMTSLISKEHKFQRNNERRKSLRRNENGLTKREQ  355
            EE K MT +ISK +  +R+N R K L R  ++  K ++
Sbjct  320  EEQKYMTIIISKKEYKRRENIRGKKLPRAIKSSRKSNK  357