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Homologs of SAUSA300_0034 gene of NC_007793_R1

DNA-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) unnamed
( - )

NC_016941
(Staphylococcus aureus MSHR1132)

0.0

100

2) SAR2236
( - )

NC_002952
(Staphylococcus aureus MRSA252)

e-280

82.6

3) SACOL2172
( - )

NC_002951
(Staphylococcus aureus COL)

e-246

84.7

4) SAUSA300_2141
( - )

NC_007793
(Staphylococcus aureus FPR3757)

e-246

84.7

5) USA300HOU_2174
( - )

NC_010079
(Staphylococcus aureus TCH1516)

e-246

84.7

6) SA957_0877
( - )

NC_022442
(Staphylococcus aureus SA957)

e-244

7) SACOL1744
( - )

NC_002951
(Staphylococcus aureus COL)

e-244

83.1

8) SAUSA300_1643
( - )

NC_007793
(Staphylococcus aureus FPR3757)

e-244

83.1

9) SATW20_16870
( - )

NC_017331
(Staphylococcus aureus TW20)

e-244

83.1

10) SAEMRSA15_16950
( - )

NC_017763
(Staphylococcus aureus HO 5096 0412)

e-242

84.8

11) SACOL1834
( - )

NC_002951
(Staphylococcus aureus COL)

e-233

83.2

12) SAUSA300_1727
( - )

NC_007793
(Staphylococcus aureus FPR3757)

e-233

82.9

13) SATW20_17750
( - )

NC_017331
(Staphylococcus aureus TW20)

e-233

82.9

14) SAOUHSC_01905
( - )

NC_007795
(Staphylococcus aureus NCTC 8325)

e-200

81.8

15) SAOUHSC_01805
( - )

NC_007795
(Staphylococcus aureus NCTC 8325)

e-184

82.1

• Sequence Alignments

1) unnamed in NC_016941


>NC_007793_R1|9|G9|87160780|YP_492755.1|Staphylococcus_aureus_subsp._aureus_USA300_FPR3757|-|8270..9781|-|SAUSA300_0034|IS1272, 
          Length = 1512

 Score = 2423 bits (6252), Expect = 0.0
 Identities = 1263/1263 (100%)
 Strand = Plus / Minus

Query: 1    agtccgggacataaagttcttggataagtgaaaaaagacaatttctattgaaataatata 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1485 agtccgggacataaagttcttggataagtgaaaaaagacaatttctattgaaataatata 1426

Query: 61   gaaattgtcttttttataaattttttgattattttcagctcgttgagctactacttttct 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1425 gaaattgtcttttttataaattttttgattattttcagctcgttgagctactacttttct 1366

Query: 121  tatattaagtgccattaatacaaaaccaagttctcttttgactttattgagtcctcggac 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1365 tatattaagtgccattaatacaaaaccaagttctcttttgactttattgagtcctcggac 1306

Query: 181  agacatccgagtgaaacccaaaatagccttcataaatccaaaaacaggttccacatcaat 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1305 agacatccgagtgaaacccaaaatagccttcataaatccaaaaacaggttccacatcaat 1246

Query: 241  ttttctttgactgtagatattttttgtttctggttctgaaagctttttgttaatttggga 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1245 ttttctttgactgtagatattttttgtttctggttctgaaagctttttgttaatttggga 1186

Query: 301  tttaaaatattcccagttataattcttcattatttttttgtttgtttttgaattgaagtt 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1185 tttaaaatattcccagttataattcttcattatttttttgtttgtttttgaattgaagtt 1126

Query: 361  catacattgatttttcagaggacattctgaacaatcatcacattcatataatttgaagtc 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1125 catacattgatttttcagaggacattctgaacaatcatcacattcatataatttgaagtc 1066

Query: 421  tcgcttataaccatacttatcatgacgataggcatatcttttaaaacctagccgtttatt 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1065 tcgcttataaccatacttatcatgacgataggcatatcttttaaaacctagccgtttatt 1006

Query: 481  attcggacaaatgaattcgtcattaatttcgtcatagttccaattttgagtattaaagat 540
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1005 attcggacaaatgaattcgtcattaatttcgtcatagttccaattttgagtattaaagat 946

Query: 541  gtcacttttatattttttagttttatcttttataaacattccatatgttatgagtggcgt 600
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 945  gtcacttttatattttttagttttatcttttataaacattccatatgttatgagtggcgt 886

Query: 601  tcgattaaagtcatctataattgccttataatttgattcactaccataacctgcatcagc 660
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 885  tcgattaaagtcatctataattgccttataatttgattcactaccataacctgcatcagc 826

Query: 661  tacaatatattcaggtaaatgaccgtaggtctcttgaattgaatttaaaaatggaatcat 720
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 825  tacaatatattcaggtaaatgaccgtaggtctcttgaattgaatttaaaaatggaatcat 766

Query: 721  cgttctagtatccgttggattttgatacacattataagataaaacaaattgggaatttgt 780
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765  cgttctagtatccgttggattttgatacacattataagataaaacaaattgggaatttgt 706

Query: 781  tgctatttgtaaattataccctggcttaagttgtccatttttcatgtgatcttctttcat 840
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705  tgctatttgtaaattataccctggcttaagttgtccatttttcatgtgatcttctttcat 646

Query: 841  tctcataaatgtcgcatcataatctgtcttagaataactatttctatcctttaaaataga 900
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645  tctcataaatgtcgcatcataatctgtcttagaataactatttctatcctttaaaataga 586

Query: 901  tttttgaaattcgtatcgatactttcgctcaaaataatcattgatttgctttttgtattt 960
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585  tttttgaaattcgtatcgatactttcgctcaaaataatcattgatttgctttttgtattt 526

Query: 961  tttgattttagttcttttgagacgtatttgttttcttgttttagtacatttttcattgtt 1020
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525  tttgattttagttcttttgagacgtatttgttttcttgttttagtacatttttcattgtt 466

Query: 1021 gatatgttggtttaaatcttcgatttctttatctaagtgactaccaatcaaatctatttc 1080
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465  gatatgttggtttaaatcttcgatttctttatctaagtgactaccaatcaaatctatttc 406

Query: 1081 ttcttttgttaattcattatcatgatcttctttaatttccggtatgattttattggttac 1140
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405  ttcttttgttaattcattatcatgatcttctttaatttccggtatgattttattggttac 346

Query: 1141 caattcatggtagagggctttagaatcctcattcatctttgattcatggttttgaatact 1200
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345  caattcatggtagagggctttagaatcctcattcatctttgattcatggttttgaatact 286

Query: 1201 ctttttccatacaaatgtatatcgattggcatttgcttcaatttttgtaccatcaataaa 1260
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285  ctttttccatacaaatgtatatcgattggcatttgcttcaatttttgtaccatcaataaa 226

Query: 1261 aat 1263
            |||
Sbjct: 225  aat 223

2) SAR2236 in NC_002952


>NC_007793_R1|9|G9|87160780|YP_492755.1|Staphylococcus_aureus_subsp._aureus_USA300_FPR3757|-|8270..9781|-|SAUSA300_0034|IS1272, 
          Length = 1512

 Score = 961 bits (2479), Expect = e-280
 Identities = 626/785 (80%)
 Strand = Plus / Plus

Query: 188 tatatgcatacactcaatctgtattttctggtcgtagaatagagaaattacttcatgaca 247
           ||||||| ||||| ||||||||||| || ||||||| |||||| ||| | ||| |||| |
Sbjct: 8   tatatgcctacacacaatctgtattctcaggtcgtaaaatagaaaaaatgcttaatgata 67

Query: 248 gtattcgattgatgtggttagctcaaaatcaaacaccttcttataaaactattaatcgtt 307
           | || ||| |||||||| || | |||||||||| ||||||||||||||| |||||||  |
Sbjct: 68  gcatccgaatgatgtggctatcacaaaatcaaaaaccttcttataaaacaattaatcaat 127

Query: 308 ttagagtaaatcctaatactgatgcattaattgaatctttatttattcagtttcatagtc 367
           ||||||||||||| ||    ||||| ||| | ||||||||||||||||| ||| | ||||
Sbjct: 128 ttagagtaaatccaaaagtagatgctttattagaatctttatttattcaattttacagtc 187

Query: 368 aatgtttaaagcaaaatcttattgatgataattcaatttttattgatggtacaaaagtag 427
           | ||| |||| ||||||||||| ||||||||  | ||||||||||||||||||||| | |
Sbjct: 188 agtgtgtaaaacaaaatcttatagatgataaagctatttttattgatggtacaaaaattg 247

Query: 428 aagctaatgccaataggtatacatttgtgtggaagaaaagtattcaaaatcacgaatcga 487
           |||| ||||||||| | ||||||||||| ||||| || ||||||||||| || ||||| |
Sbjct: 248 aagcaaatgccaatcgatatacatttgtatggaaaaagagtattcaaaaccatgaatcaa 307

Query: 488 aattgaacgaaaattcaaaagcattatatcgtgacttagttgaagaaaaaataataccag 547
           |  |||| ||  |||| |||||  | || | ||| || ||     | ||||| ||||| |
Sbjct: 308 agatgaatgaggattctaaagccctctaccatgaattggtaaccaataaaatcataccgg 367

Query: 548 agataaaagaagatggagatagcgatttaacaatagaagaaatagatttaattggtagtc 607
           | || |||||||||   ||||  || ||||||| ||||||||||||||| ||||||||||
Sbjct: 368 aaattaaagaagatcatgataatgaattaacaaaagaagaaatagatttgattggtagtc 427

Query: 608 atttagataaagaaatcgaagatttaaatcattctattcagaacgaagattgtactcaaa 667
           | |||||||||||||||||||||||||| ||   |||  | || ||| | |||||| |||
Sbjct: 428 acttagataaagaaatcgaagatttaaaccaacatatcaacaatgaaaaatgtactaaaa 487

Query: 668 ttagaaaacagacccgtaaaaaaagaactgagattaagaagttcaaaaagaaatttgatg 727
             |||||||| |  |||   ||||||||| | || || || | ||||||| || |  |||
Sbjct: 488 caagaaaacaaatacgtctcaaaagaactaaaatcaaaaaatacaaaaagcaaatcaatg 547

Query: 728 attattccgaaagaaaaagtaaatatgaagaacaaaaatcgattcttaaagatagaaata 787
           ||||||  ||  ||||   |  ||| |||   |||||||| ||| | || ||||||||||
Sbjct: 548 attattttgagcgaaagtatcgatacgaatttcaaaaatctattttaaaggatagaaata 607

Query: 788 gcttttctaaaactgatcatgatgcaacttttatgagaatgaaggaagaccatatgaaaa 847
           | | |||||| || ||| ||||||| || |||||||||||||| ||||| || |||||||
Sbjct: 608 gttattctaagacagattatgatgcgacatttatgagaatgaaagaagatcacatgaaaa 667

Query: 848 atggccaacttaagccaggatacaatttacaaatagcgacaaattctcaatttgttttat 907
           |||| |||||||||||||| || |||||||||||||| |||||||| |||||||||||||
Sbjct: 668 atggacaacttaagccagggtataatttacaaatagcaacaaattcccaatttgttttat 727

Query: 908 cctatgacctatttcaaaacccgacagatactagaactttaattccatttttaacaatga 967
           | ||| |  | | |||||| || || |||||||||||  | |||||||||||||     |
Sbjct: 728 cttataatgtgtatcaaaatccaacggatactagaacgatgattccatttttaa-----a 782

Query: 968 ttcaa 972
           |||||
Sbjct: 783 ttcaa 787


 Score = 829 bits (2139), Expect = e-240
 Identities = 509/597 (85%)
 Strand = Plus / Plus

Query: 976  accttcggttatttaccggagtatattgttagctgatgcaggttatggtagtgagcaaaa 1035
            |||| |||| ||||||| || ||||||| |||||||||||||||||||||||||   |||
Sbjct: 796  acctacggtcatttacctgaatatattg-tagctgatgcaggttatggtagtgaatcaaa 854

Query: 1036 ctatatggctattatagatgattttaataaaacgccacttattacgtatggtatgtttat 1095
             |||| ||| ||||||||||| ||||||  ||||||||| || || ||||| ||||||||
Sbjct: 855  ttataaggcaattatagatgactttaatcgaacgccactcataacatatggaatgtttat 914

Query: 1096 taaagataaaacgagaaagtttaaaagtgacatttttaacactcaaaactggaaatatga 1155
             ||||||||||| | ||| | |||||||||||| ||||| |||||||| ||||| |||||
Sbjct: 915  aaaagataaaactaaaaaatataaaagtgacatctttaatactcaaaattggaactatga 974

Query: 1156 cgaacttaatgatgaatttatatgtcctaataacaaaagaataggttttaaaagatatgc 1215
            |||| ||||||| ||||| || ||||| ||||| ||| |  |||||||||||||||||||
Sbjct: 975  cgaaattaatgacgaattcatttgtccgaataataaacggctaggttttaaaagatatgc 1034

Query: 1216 ataccgtaatgatagatatggttttaaacgtgacttcaaactatatgaatgcgatgactg 1275
             || ||| ||||||  ||||||| ||| || ||||||||| |||||||||| ||||| ||
Sbjct: 1035 ctatcgtcatgataagtatggttataagcgagacttcaaattatatgaatgtgatgattg 1094

Query: 1276 ttcagcatgttctttgaggcaacaatgcatgaagccaaattcgaaatccaataagaaaat 1335
            ||||| |||| || |||   | ||||| |||||    ||||| ||| | || || |||||
Sbjct: 1095 ttcagaatgtcctctgaaaaatcaatgtatgaacttcaattcaaaaacaaacaaaaaaat 1154

Query: 1336 catgaagaattataattgggaatactttaaagcccaaattaatcaaaagctttctgaacc 1395
             |||||||||||||| |||||||| |||||| ||||||||||  |||||||||| |||||
Sbjct: 1155 aatgaagaattataactgggaatattttaaatcccaaattaacaaaaagctttcagaacc 1214

Query: 1396 agaaacgaaaaaaatctatagtcaaagaaaaattgatgtagagcctgtttttggatttat 1455
            |||||| ||||| ||||| |||||||||||||||||||| || |||||||||||||||||
Sbjct: 1215 agaaacaaaaaatatctacagtcaaagaaaaattgatgtggaacctgtttttggatttat 1274

Query: 1456 gaaggctattttgggtttcactcgaatgtcagttcgaggaataaataaagttaaacgaga 1515
            |||||||||||||||||||||||| ||||| || |||||| | |||||||| ||| ||||
Sbjct: 1275 gaaggctattttgggtttcactcggatgtctgtccgaggactcaataaagtcaaaagaga 1334

Query: 1516 gctaggttttgtattaatggcacttaatataaggaaaa-tagtagctcgacgagctg 1571
             || ||||||||||||||||||||||||||||| |||| ||||||||| ||||||||
Sbjct: 1335 acttggttttgtattaatggcacttaatataag-aaaagtagtagctcaacgagctg 1390

3) SACOL2172 in NC_002951


>NC_007793_R1|9|G9|87160780|YP_492755.1|Staphylococcus_aureus_subsp._aureus_USA300_FPR3757|-|8270..9781|-|SAUSA300_0034|IS1272, 
          Length = 1512

 Score = 846 bits (2184), Expect = e-246
 Identities = 511/596 (86%)
 Strand = Plus / Plus

Query: 954  accttcggttatttaccggagtatattgtagctgatgcaggttatggtagtgagcaaaac 1013
            |||| |||| ||||||| || ||||||||||||||||||||||||||||||||   ||| 
Sbjct: 796  acctacggtcatttacctgaatatattgtagctgatgcaggttatggtagtgaatcaaat 855

Query: 1014 tatatggctattatagatgattttaataaaacgccacttattacgtatggcatgtttatt 1073
            |||| ||| ||||||||||| ||||||  ||||||||| || || ||||| |||||||| 
Sbjct: 856  tataaggcaattatagatgactttaatcgaacgccactcataacatatggaatgtttata 915

Query: 1074 aaagataaaactagaaagtttaaaagtgacattttcaacacttaaaattggaaatatgac 1133
            ||||||||||||| ||| | |||||||||||| || || ||| |||||||||| ||||||
Sbjct: 916  aaagataaaactaaaaaatataaaagtgacatctttaatactcaaaattggaactatgac 975

Query: 1134 gaacttaatgatgaatttatatgtcctaataacaaaagaataggttttaaaagatatgca 1193
            ||| ||||||| ||||| || ||||| ||||| ||| |  ||||||||||||||||||| 
Sbjct: 976  gaaattaatgacgaattcatttgtccgaataataaacggctaggttttaaaagatatgcc 1035

Query: 1194 taccgtaatgatagatatggttttaaacgagacttcaaactatatgaatgtgatgactgt 1253
            || ||| ||||||  ||||||| ||| |||||||||||| |||||||||||||||| |||
Sbjct: 1036 tatcgtcatgataagtatggttataagcgagacttcaaattatatgaatgtgatgattgt 1095

Query: 1254 tcatcatgttctttgagacatcaatgcatgaaaccaaattcgaaatccaataagaaaatc 1313
            |||  |||| || ||| | ||||||| |||||    ||||| ||| | || || ||||| 
Sbjct: 1096 tcagaatgtcctctgaaaaatcaatgtatgaacttcaattcaaaaacaaacaaaaaaata 1155

Query: 1314 atgaagaattataattgggaatactttaaagtccaaattaatcaaaagctttctgaacca 1373
            |||||||||||||| |||||||| ||||||  |||||||||  |||||||||| ||||||
Sbjct: 1156 atgaagaattataactgggaatattttaaatcccaaattaacaaaaagctttcagaacca 1215

Query: 1374 gaaacgaaaaaaatctatagtcaaagaaaaattgatgtagagcctgtttttggatttatg 1433
            ||||| ||||| ||||| |||||||||||||||||||| || ||||||||||||||||||
Sbjct: 1216 gaaacaaaaaatatctacagtcaaagaaaaattgatgtggaacctgtttttggatttatg 1275

Query: 1434 aaggctattttgggtttcactcgaatgtcagttcgaggaataaataaagttaaacgagag 1493
            ||||||||||||||||||||||| ||||| || |||||| | |||||||| ||| |||| 
Sbjct: 1276 aaggctattttgggtttcactcggatgtctgtccgaggactcaataaagtcaaaagagaa 1335

Query: 1494 ctaggttttgtattaatggcacttaatataaggaaaa-tagcagctcaacgagctg 1548
            || ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||
Sbjct: 1336 cttggttttgtattaatggcacttaatataag-aaaagtagtagctcaacgagctg 1390


 Score = 291 bits (750), Expect = 1e-78
 Identities = 184/229 (80%)
 Strand = Plus / Plus

Query: 386 ttattgatggtacaaaagtagaagctaatgccaataggtatacatttgtgtggaagaaaa 445
           ||||||||||||||||| | ||||| ||||||||| | ||||||||||| ||||| || |
Sbjct: 227 ttattgatggtacaaaaattgaagcaaatgccaatcgatatacatttgtatggaaaaaga 286

Query: 446 gtattcaaaatcacgaatcgaaattgaacgaaaattcaaaaacattatatcgtgacttag 505
           |||||||||| || ||||| ||  |||| ||  |||| ||| |  | || | ||| || |
Sbjct: 287 gtattcaaaaccatgaatcaaagatgaatgaggattctaaagccctctaccatgaattgg 346

Query: 506 ttgaagaaaaaataataccagagataaaagaagatggagatagcgatttaacaatagaag 565
           |     | ||||| ||||| || || |||||||||   ||||  || ||||||| |||||
Sbjct: 347 taaccaataaaatcataccggaaattaaagaagatcatgataatgaattaacaaaagaag 406

Query: 566 aaatagatttaattggtagtcatttagataaagaaatcgaaggtttaaa 614
           |||||||||| ||||||||||| ||||||||||||||||||| ||||||
Sbjct: 407 aaatagatttgattggtagtcacttagataaagaaatcgaagatttaaa 455


 Score = 235 bits (605), Expect = 7e-62
 Identities = 141/167 (84%)
 Strand = Plus / Plus

Query: 784 atgatgcaacttttatgagaatgaaggaagaccatatgaaaaatggccaacttaagccag 843
           ||||||| || |||||||||||||| ||||| || ||||||||||| |||||||||||||
Sbjct: 626 atgatgcgacatttatgagaatgaaagaagatcacatgaaaaatggacaacttaagccag 685

Query: 844 gatacaatttacaaatagcgacaaattctcaatttgttttatcctatgacctatttcaaa 903
           | || |||||||||||||| |||||||| |||||||||||||| ||| |  | | |||||
Sbjct: 686 ggtataatttacaaatagcaacaaattcccaatttgttttatcttataatgtgtatcaaa 745

Query: 904 acccaacagatactagaactttaattccatttttaacaatgattcaa 950
           | ||||| |||||||||||  | |||||||||||||     ||||||
Sbjct: 746 atccaacggatactagaacgatgattccatttttaa-----attcaa 787


 Score = 211 bits (543), Expect = 1e-54
 Identities = 136/166 (82%)
 Strand = Plus / Plus

Query: 188 tatatgcatatactcaatctgtattttctggtcgtagaatagagaaattacttcatgaca 247
           ||||||| || || ||||||||||| || ||||||| |||||| ||| | ||| |||| |
Sbjct: 8   tatatgcctacacacaatctgtattctcaggtcgtaaaatagaaaaaatgcttaatgata 67

Query: 248 gtattcgaatgatgtggttagctcaaaatcaaacaccttcttataaaactattaatcgta 307
           | || |||||||||||| || | |||||||||| ||||||||||||||| |||||||   
Sbjct: 68  gcatccgaatgatgtggctatcacaaaatcaaaaaccttcttataaaacaattaatcaat 127

Query: 308 ttagagtgaatcctaatactgatgcgttaattgaatctttatttat 353
           ||||||| ||||| ||    ||||| ||| | ||||||||||||||
Sbjct: 128 ttagagtaaatccaaaagtagatgctttattagaatctttatttat 173


 Score = 27 bits (69), Expect = 3e+01
 Identities = 16/19 (84%)
 Strand = Plus / Plus

Query: 1596 aatagaaatcagctttttt 1614
            |||||||||   |||||||
Sbjct: 1437 aatagaaattgtctttttt 1455


 Score = 15 bits (39), Expect = 8e+04
 Identities = 8/8 (100%)
 Strand = Plus / Plus

Query: 1579 atttctat 1586
            ||||||||
Sbjct: 1421 atttctat 1428


 Score = 15 bits (39), Expect = 1e+05
 Identities = 8/8 (100%)
 Strand = Plus / Plus

Query: 1553 ttataaaa 1560
            ||||||||
Sbjct: 1407 ttataaaa 1414

4) SAUSA300_2141 in NC_007793


>NC_007793_R1|9|G9|87160780|YP_492755.1|Staphylococcus_aureus_subsp._aureus_USA300_FPR3757|-|8270..9781|-|SAUSA300_0034|IS1272, 
          Length = 1512

 Score = 846 bits (2184), Expect = e-246
 Identities = 511/596 (86%)
 Strand = Plus / Plus

Query: 954  accttcggttatttaccggagtatattgtagctgatgcaggttatggtagtgagcaaaac 1013
            |||| |||| ||||||| || ||||||||||||||||||||||||||||||||   ||| 
Sbjct: 796  acctacggtcatttacctgaatatattgtagctgatgcaggttatggtagtgaatcaaat 855

Query: 1014 tatatggctattatagatgattttaataaaacgccacttattacgtatggcatgtttatt 1073
            |||| ||| ||||||||||| ||||||  ||||||||| || || ||||| |||||||| 
Sbjct: 856  tataaggcaattatagatgactttaatcgaacgccactcataacatatggaatgtttata 915

Query: 1074 aaagataaaactagaaagtttaaaagtgacattttcaacacttaaaattggaaatatgac 1133
            ||||||||||||| ||| | |||||||||||| || || ||| |||||||||| ||||||
Sbjct: 916  aaagataaaactaaaaaatataaaagtgacatctttaatactcaaaattggaactatgac 975

Query: 1134 gaacttaatgatgaatttatatgtcctaataacaaaagaataggttttaaaagatatgca 1193
            ||| ||||||| ||||| || ||||| ||||| ||| |  ||||||||||||||||||| 
Sbjct: 976  gaaattaatgacgaattcatttgtccgaataataaacggctaggttttaaaagatatgcc 1035

Query: 1194 taccgtaatgatagatatggttttaaacgagacttcaaactatatgaatgtgatgactgt 1253
            || ||| ||||||  ||||||| ||| |||||||||||| |||||||||||||||| |||
Sbjct: 1036 tatcgtcatgataagtatggttataagcgagacttcaaattatatgaatgtgatgattgt 1095

Query: 1254 tcatcatgttctttgagacatcaatgcatgaaaccaaattcgaaatccaataagaaaatc 1313
            |||  |||| || ||| | ||||||| |||||    ||||| ||| | || || ||||| 
Sbjct: 1096 tcagaatgtcctctgaaaaatcaatgtatgaacttcaattcaaaaacaaacaaaaaaata 1155

Query: 1314 atgaagaattataattgggaatactttaaagtccaaattaatcaaaagctttctgaacca 1373
            |||||||||||||| |||||||| ||||||  |||||||||  |||||||||| ||||||
Sbjct: 1156 atgaagaattataactgggaatattttaaatcccaaattaacaaaaagctttcagaacca 1215

Query: 1374 gaaacgaaaaaaatctatagtcaaagaaaaattgatgtagagcctgtttttggatttatg 1433
            ||||| ||||| ||||| |||||||||||||||||||| || ||||||||||||||||||
Sbjct: 1216 gaaacaaaaaatatctacagtcaaagaaaaattgatgtggaacctgtttttggatttatg 1275

Query: 1434 aaggctattttgggtttcactcgaatgtcagttcgaggaataaataaagttaaacgagag 1493
            ||||||||||||||||||||||| ||||| || |||||| | |||||||| ||| |||| 
Sbjct: 1276 aaggctattttgggtttcactcggatgtctgtccgaggactcaataaagtcaaaagagaa 1335

Query: 1494 ctaggttttgtattaatggcacttaatataaggaaaa-tagcagctcaacgagctg 1548
            || ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||
Sbjct: 1336 cttggttttgtattaatggcacttaatataag-aaaagtagtagctcaacgagctg 1390


 Score = 291 bits (750), Expect = 1e-78
 Identities = 184/229 (80%)
 Strand = Plus / Plus

Query: 386 ttattgatggtacaaaagtagaagctaatgccaataggtatacatttgtgtggaagaaaa 445
           ||||||||||||||||| | ||||| ||||||||| | ||||||||||| ||||| || |
Sbjct: 227 ttattgatggtacaaaaattgaagcaaatgccaatcgatatacatttgtatggaaaaaga 286

Query: 446 gtattcaaaatcacgaatcgaaattgaacgaaaattcaaaaacattatatcgtgacttag 505
           |||||||||| || ||||| ||  |||| ||  |||| ||| |  | || | ||| || |
Sbjct: 287 gtattcaaaaccatgaatcaaagatgaatgaggattctaaagccctctaccatgaattgg 346

Query: 506 ttgaagaaaaaataataccagagataaaagaagatggagatagcgatttaacaatagaag 565
           |     | ||||| ||||| || || |||||||||   ||||  || ||||||| |||||
Sbjct: 347 taaccaataaaatcataccggaaattaaagaagatcatgataatgaattaacaaaagaag 406

Query: 566 aaatagatttaattggtagtcatttagataaagaaatcgaaggtttaaa 614
           |||||||||| ||||||||||| ||||||||||||||||||| ||||||
Sbjct: 407 aaatagatttgattggtagtcacttagataaagaaatcgaagatttaaa 455


 Score = 235 bits (605), Expect = 7e-62
 Identities = 141/167 (84%)
 Strand = Plus / Plus

Query: 784 atgatgcaacttttatgagaatgaaggaagaccatatgaaaaatggccaacttaagccag 843
           ||||||| || |||||||||||||| ||||| || ||||||||||| |||||||||||||
Sbjct: 626 atgatgcgacatttatgagaatgaaagaagatcacatgaaaaatggacaacttaagccag 685

Query: 844 gatacaatttacaaatagcgacaaattctcaatttgttttatcctatgacctatttcaaa 903
           | || |||||||||||||| |||||||| |||||||||||||| ||| |  | | |||||
Sbjct: 686 ggtataatttacaaatagcaacaaattcccaatttgttttatcttataatgtgtatcaaa 745

Query: 904 acccaacagatactagaactttaattccatttttaacaatgattcaa 950
           | ||||| |||||||||||  | |||||||||||||     ||||||
Sbjct: 746 atccaacggatactagaacgatgattccatttttaa-----attcaa 787


 Score = 211 bits (543), Expect = 1e-54
 Identities = 136/166 (82%)
 Strand = Plus / Plus

Query: 188 tatatgcatatactcaatctgtattttctggtcgtagaatagagaaattacttcatgaca 247
           ||||||| || || ||||||||||| || ||||||| |||||| ||| | ||| |||| |
Sbjct: 8   tatatgcctacacacaatctgtattctcaggtcgtaaaatagaaaaaatgcttaatgata 67

Query: 248 gtattcgaatgatgtggttagctcaaaatcaaacaccttcttataaaactattaatcgta 307
           | || |||||||||||| || | |||||||||| ||||||||||||||| |||||||   
Sbjct: 68  gcatccgaatgatgtggctatcacaaaatcaaaaaccttcttataaaacaattaatcaat 127

Query: 308 ttagagtgaatcctaatactgatgcgttaattgaatctttatttat 353
           ||||||| ||||| ||    ||||| ||| | ||||||||||||||
Sbjct: 128 ttagagtaaatccaaaagtagatgctttattagaatctttatttat 173


 Score = 27 bits (69), Expect = 3e+01
 Identities = 16/19 (84%)
 Strand = Plus / Plus

Query: 1596 aatagaaatcagctttttt 1614
            |||||||||   |||||||
Sbjct: 1437 aatagaaattgtctttttt 1455


 Score = 15 bits (39), Expect = 8e+04
 Identities = 8/8 (100%)
 Strand = Plus / Plus

Query: 1579 atttctat 1586
            ||||||||
Sbjct: 1421 atttctat 1428


 Score = 15 bits (39), Expect = 1e+05
 Identities = 8/8 (100%)
 Strand = Plus / Plus

Query: 1553 ttataaaa 1560
            ||||||||
Sbjct: 1407 ttataaaa 1414

5) USA300HOU_2174 in NC_010079


>NC_007793_R1|9|G9|87160780|YP_492755.1|Staphylococcus_aureus_subsp._aureus_USA300_FPR3757|-|8270..9781|-|SAUSA300_0034|IS1272, 
          Length = 1512

 Score = 846 bits (2184), Expect = e-246
 Identities = 511/596 (86%)
 Strand = Plus / Plus

Query: 954  accttcggttatttaccggagtatattgtagctgatgcaggttatggtagtgagcaaaac 1013
            |||| |||| ||||||| || ||||||||||||||||||||||||||||||||   ||| 
Sbjct: 796  acctacggtcatttacctgaatatattgtagctgatgcaggttatggtagtgaatcaaat 855

Query: 1014 tatatggctattatagatgattttaataaaacgccacttattacgtatggcatgtttatt 1073
            |||| ||| ||||||||||| ||||||  ||||||||| || || ||||| |||||||| 
Sbjct: 856  tataaggcaattatagatgactttaatcgaacgccactcataacatatggaatgtttata 915

Query: 1074 aaagataaaactagaaagtttaaaagtgacattttcaacacttaaaattggaaatatgac 1133
            ||||||||||||| ||| | |||||||||||| || || ||| |||||||||| ||||||
Sbjct: 916  aaagataaaactaaaaaatataaaagtgacatctttaatactcaaaattggaactatgac 975

Query: 1134 gaacttaatgatgaatttatatgtcctaataacaaaagaataggttttaaaagatatgca 1193
            ||| ||||||| ||||| || ||||| ||||| ||| |  ||||||||||||||||||| 
Sbjct: 976  gaaattaatgacgaattcatttgtccgaataataaacggctaggttttaaaagatatgcc 1035

Query: 1194 taccgtaatgatagatatggttttaaacgagacttcaaactatatgaatgtgatgactgt 1253
            || ||| ||||||  ||||||| ||| |||||||||||| |||||||||||||||| |||
Sbjct: 1036 tatcgtcatgataagtatggttataagcgagacttcaaattatatgaatgtgatgattgt 1095

Query: 1254 tcatcatgttctttgagacatcaatgcatgaaaccaaattcgaaatccaataagaaaatc 1313
            |||  |||| || ||| | ||||||| |||||    ||||| ||| | || || ||||| 
Sbjct: 1096 tcagaatgtcctctgaaaaatcaatgtatgaacttcaattcaaaaacaaacaaaaaaata 1155

Query: 1314 atgaagaattataattgggaatactttaaagtccaaattaatcaaaagctttctgaacca 1373
            |||||||||||||| |||||||| ||||||  |||||||||  |||||||||| ||||||
Sbjct: 1156 atgaagaattataactgggaatattttaaatcccaaattaacaaaaagctttcagaacca 1215

Query: 1374 gaaacgaaaaaaatctatagtcaaagaaaaattgatgtagagcctgtttttggatttatg 1433
            ||||| ||||| ||||| |||||||||||||||||||| || ||||||||||||||||||
Sbjct: 1216 gaaacaaaaaatatctacagtcaaagaaaaattgatgtggaacctgtttttggatttatg 1275

Query: 1434 aaggctattttgggtttcactcgaatgtcagttcgaggaataaataaagttaaacgagag 1493
            ||||||||||||||||||||||| ||||| || |||||| | |||||||| ||| |||| 
Sbjct: 1276 aaggctattttgggtttcactcggatgtctgtccgaggactcaataaagtcaaaagagaa 1335

Query: 1494 ctaggttttgtattaatggcacttaatataaggaaaa-tagcagctcaacgagctg 1548
            || ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||
Sbjct: 1336 cttggttttgtattaatggcacttaatataag-aaaagtagtagctcaacgagctg 1390


 Score = 291 bits (750), Expect = 1e-78
 Identities = 184/229 (80%)
 Strand = Plus / Plus

Query: 386 ttattgatggtacaaaagtagaagctaatgccaataggtatacatttgtgtggaagaaaa 445
           ||||||||||||||||| | ||||| ||||||||| | ||||||||||| ||||| || |
Sbjct: 227 ttattgatggtacaaaaattgaagcaaatgccaatcgatatacatttgtatggaaaaaga 286

Query: 446 gtattcaaaatcacgaatcgaaattgaacgaaaattcaaaaacattatatcgtgacttag 505
           |||||||||| || ||||| ||  |||| ||  |||| ||| |  | || | ||| || |
Sbjct: 287 gtattcaaaaccatgaatcaaagatgaatgaggattctaaagccctctaccatgaattgg 346

Query: 506 ttgaagaaaaaataataccagagataaaagaagatggagatagcgatttaacaatagaag 565
           |     | ||||| ||||| || || |||||||||   ||||  || ||||||| |||||
Sbjct: 347 taaccaataaaatcataccggaaattaaagaagatcatgataatgaattaacaaaagaag 406

Query: 566 aaatagatttaattggtagtcatttagataaagaaatcgaaggtttaaa 614
           |||||||||| ||||||||||| ||||||||||||||||||| ||||||
Sbjct: 407 aaatagatttgattggtagtcacttagataaagaaatcgaagatttaaa 455


 Score = 235 bits (605), Expect = 7e-62
 Identities = 141/167 (84%)
 Strand = Plus / Plus

Query: 784 atgatgcaacttttatgagaatgaaggaagaccatatgaaaaatggccaacttaagccag 843
           ||||||| || |||||||||||||| ||||| || ||||||||||| |||||||||||||
Sbjct: 626 atgatgcgacatttatgagaatgaaagaagatcacatgaaaaatggacaacttaagccag 685

Query: 844 gatacaatttacaaatagcgacaaattctcaatttgttttatcctatgacctatttcaaa 903
           | || |||||||||||||| |||||||| |||||||||||||| ||| |  | | |||||
Sbjct: 686 ggtataatttacaaatagcaacaaattcccaatttgttttatcttataatgtgtatcaaa 745

Query: 904 acccaacagatactagaactttaattccatttttaacaatgattcaa 950
           | ||||| |||||||||||  | |||||||||||||     ||||||
Sbjct: 746 atccaacggatactagaacgatgattccatttttaa-----attcaa 787


 Score = 211 bits (543), Expect = 1e-54
 Identities = 136/166 (82%)
 Strand = Plus / Plus

Query: 188 tatatgcatatactcaatctgtattttctggtcgtagaatagagaaattacttcatgaca 247
           ||||||| || || ||||||||||| || ||||||| |||||| ||| | ||| |||| |
Sbjct: 8   tatatgcctacacacaatctgtattctcaggtcgtaaaatagaaaaaatgcttaatgata 67

Query: 248 gtattcgaatgatgtggttagctcaaaatcaaacaccttcttataaaactattaatcgta 307
           | || |||||||||||| || | |||||||||| ||||||||||||||| |||||||   
Sbjct: 68  gcatccgaatgatgtggctatcacaaaatcaaaaaccttcttataaaacaattaatcaat 127

Query: 308 ttagagtgaatcctaatactgatgcgttaattgaatctttatttat 353
           ||||||| ||||| ||    ||||| ||| | ||||||||||||||
Sbjct: 128 ttagagtaaatccaaaagtagatgctttattagaatctttatttat 173


 Score = 27 bits (69), Expect = 3e+01
 Identities = 16/19 (84%)
 Strand = Plus / Plus

Query: 1596 aatagaaatcagctttttt 1614
            |||||||||   |||||||
Sbjct: 1437 aatagaaattgtctttttt 1455


 Score = 15 bits (39), Expect = 8e+04
 Identities = 8/8 (100%)
 Strand = Plus / Plus

Query: 1579 atttctat 1586
            ||||||||
Sbjct: 1421 atttctat 1428


 Score = 15 bits (39), Expect = 1e+05
 Identities = 8/8 (100%)
 Strand = Plus / Plus

Query: 1553 ttataaaa 1560
            ||||||||
Sbjct: 1407 ttataaaa 1414

6) SA957_0877 in NC_022442


>NC_007793_R1|9|G9|87160780|YP_492755.1|Staphylococcus_aureus_subsp._aureus_USA300_FPR3757|-|8270..9781|-|SAUSA300_0034|IS1272, 
          Length = 1512

 Score = 842 bits (2173), Expect = e-244
 Identities = 510/596 (86%)
 Strand = Plus / Plus

Query: 980  accttcggttatttaccggagtatattgtagctgatgcaggttatggtagtgagcaaaac 1039
            |||| |||| ||||||| || ||||||||||||||||||||||||||||||||   ||| 
Sbjct: 796  acctacggtcatttacctgaatatattgtagctgatgcaggttatggtagtgaatcaaat 855

Query: 1040 tatatggctattatagatgattttaataaaacgccacttattacgtatggcatgtttatt 1099
            |||| ||| ||||||||||| ||||||  ||||||||| || || ||||| |||||||| 
Sbjct: 856  tataaggcaattatagatgactttaatcgaacgccactcataacatatggaatgtttata 915

Query: 1100 aaagataaaactagaaagtttaaaagtgacatttttaacactcaaaattggaaatatgac 1159
            ||||||||||||| ||| | |||||||||||| ||||| |||||||||||||| ||||||
Sbjct: 916  aaagataaaactaaaaaatataaaagtgacatctttaatactcaaaattggaactatgac 975

Query: 1160 gaacttaatgatgaatttatatgtcctaataacaaaagaataggttttaaaagatatgca 1219
            ||| ||||||| ||||| || ||||| ||||| ||| |  ||||||||||||||||||| 
Sbjct: 976  gaaattaatgacgaattcatttgtccgaataataaacggctaggttttaaaagatatgcc 1035

Query: 1220 taccgtaatgatagatatggttttaaacgtgacttcaagctatatgaatgcgatgactgt 1279
            || ||| ||||||  ||||||| ||| || ||||||||  |||||||||| ||||| |||
Sbjct: 1036 tatcgtcatgataagtatggttataagcgagacttcaaattatatgaatgtgatgattgt 1095

Query: 1280 tcagcatgttctttgaggcaacaatgcatgaagccaaattcgaaatccaataagaaaatc 1339
            |||| |||| || |||   | ||||| |||||    ||||| ||| | || || ||||| 
Sbjct: 1096 tcagaatgtcctctgaaaaatcaatgtatgaacttcaattcaaaaacaaacaaaaaaata 1155

Query: 1340 atgaagaattataattgggaatactttaaagcccaaattaatcaaaagctttctgaacca 1399
            |||||||||||||| |||||||| |||||| ||||||||||  |||||||||| ||||||
Sbjct: 1156 atgaagaattataactgggaatattttaaatcccaaattaacaaaaagctttcagaacca 1215

Query: 1400 gaaacgaaaaaaatctatagtcaaagaaaaattgatgtagagcctgtttttggatttatg 1459
            ||||| ||||| ||||| |||||||||||||||||||| || ||||||||||||||||||
Sbjct: 1216 gaaacaaaaaatatctacagtcaaagaaaaattgatgtggaacctgtttttggatttatg 1275

Query: 1460 aaggctattttgggtttcactcgaatgtcagttcgaggaataaataaagttaaacgagag 1519
            ||||||||||||||||||||||| ||||| || |||||| | |||||||| ||| |||| 
Sbjct: 1276 aaggctattttgggtttcactcggatgtctgtccgaggactcaataaagtcaaaagagaa 1335

Query: 1520 ctaggttttgtattaatggcacttaatataaggaaaa-tagtagctcgacgagctg 1574
            || ||||||||||||||||||||||||||||| |||| ||||||||| ||||||||
Sbjct: 1336 cttggttttgtattaatggcacttaatataag-aaaagtagtagctcaacgagctg 1390


 Score = 314 bits (809), Expect = 1e-85
 Identities = 197/236 (83%)
 Strand = Plus / Plus

Query: 188 tatatgcatatactcaatctgtattttctggtcgtagaatagagaaattacttcatgaca 247
           ||||||| || || ||||||||||| || ||||||| |||||| ||| | ||| |||| |
Sbjct: 8   tatatgcctacacacaatctgtattctcaggtcgtaaaatagaaaaaatgcttaatgata 67

Query: 248 gtattcgaatgatgtggttagctcaaaatcaaacaccttcttataaaactattaatcgtt 307
           | || |||||||||||| || | |||||||||| ||||||||||||||| |||||||  |
Sbjct: 68  gcatccgaatgatgtggctatcacaaaatcaaaaaccttcttataaaacaattaatcaat 127

Query: 308 ttagagtaaatcctaatactgatgcattaattgaatctttatttatccagtttcatagtc 367
           ||||||||||||| ||    ||||| ||| | |||||||||||||| || ||| | ||||
Sbjct: 128 ttagagtaaatccaaaagtagatgctttattagaatctttatttattcaattttacagtc 187

Query: 368 aatgtttaaagcaaaatcttattgatgataattcaatttttattgatggtacaaaa 423
           | ||| |||| ||||||||||| ||||||||  | |||||||||||||||||||||
Sbjct: 188 agtgtgtaaaacaaaatcttatagatgataaagctatttttattgatggtacaaaa 243


 Score = 273 bits (705), Expect = 2e-73
 Identities = 195/249 (78%)
 Strand = Plus / Plus

Query: 549 attaaagaagatggagatagcgatttaacaatagaagaaatagatttaattggtagtcat 608
           ||||||||||||   ||||  || ||||||| ||||||||||||||| ||||||||||| 
Sbjct: 370 attaaagaagatcatgataatgaattaacaaaagaagaaatagatttgattggtagtcac 429

Query: 609 ttagataaagaaatcgaagatttaaatcattctattgagaacgaagattgtactcaaatt 668
           |||||||||||||||||||||||||| ||   |||  | || ||| | |||||| |||  
Sbjct: 430 ttagataaagaaatcgaagatttaaaccaacatatcaacaatgaaaaatgtactaaaaca 489

Query: 669 agaaaacagacccgtaaaaaaagaactgagattaataagttcaaaaagaaatttgatgat 728
           |||||||| |  |||   ||||||||| | || || || | ||||||| || |  |||||
Sbjct: 490 agaaaacaaatacgtctcaaaagaactaaaatcaaaaaatacaaaaagcaaatcaatgat 549

Query: 729 tattccgaaagaaaaaataaatatgaagaacaaaaatcgattcttaaa-gatagaaatag 787
           ||||  ||  ||||  ||  ||| |||   |||||||| ||| ||||| |||||||||||
Sbjct: 550 tattttgagcgaaagtatcgatacgaatttcaaaaatctatt-ttaaaggatagaaatag 608

Query: 788 tttttctaa 796
           || ||||||
Sbjct: 609 ttattctaa 617


 Score = 231 bits (597), Expect = 7e-61
 Identities = 139/167 (83%)
 Strand = Plus / Plus

Query: 810 atgatgcaacttttatgagaatgaaggaaggccatatgaaaaatggccaacttaagccag 869
           ||||||| || |||||||||||||| ||||  || ||||||||||| |||||||||||||
Sbjct: 626 atgatgcgacatttatgagaatgaaagaagatcacatgaaaaatggacaacttaagccag 685

Query: 870 gatacaatttacaaatagcgacaaattctcaatttgttttatcctatgacctatttcaaa 929
           | || |||||||||||||| |||||||| |||||||||||||| ||| |  | | |||||
Sbjct: 686 ggtataatttacaaatagcaacaaattcccaatttgttttatcttataatgtgtatcaaa 745

Query: 930 acccaacagatactagaacattaatcccatttttaacaatgattcaa 976
           | ||||| |||||||||||  | || ||||||||||     ||||||
Sbjct: 746 atccaacggatactagaacgatgattccatttttaa-----attcaa 787

7) SACOL1744 in NC_002951


>NC_007793_R1|9|G9|87160780|YP_492755.1|Staphylococcus_aureus_subsp._aureus_USA300_FPR3757|-|8270..9781|-|SAUSA300_0034|IS1272, 
          Length = 1512

 Score = 840 bits (2169), Expect = e-244
 Identities = 508/596 (85%)
 Strand = Plus / Plus

Query: 981  accttcggttatttaccagagtatattgtagctgatgcaggttatggtagtgagcaaaac 1040
            |||| |||| ||||||| || ||||||||||||||||||||||||||||||||   ||| 
Sbjct: 796  acctacggtcatttacctgaatatattgtagctgatgcaggttatggtagtgaatcaaat 855

Query: 1041 tatatggctattatagatgattttaataaaacgccacttattacgtatggcatgtttatt 1100
            |||| ||| ||||||||||| ||||||  ||||||||| || || ||||| |||||||| 
Sbjct: 856  tataaggcaattatagatgactttaatcgaacgccactcataacatatggaatgtttata 915

Query: 1101 aaagataaaactagaaagtttaaaagtggcattttcaacactcaaaattggaaatatgac 1160
            ||||||||||||| ||| | |||||||| ||| || || |||||||||||||| ||||||
Sbjct: 916  aaagataaaactaaaaaatataaaagtgacatctttaatactcaaaattggaactatgac 975

Query: 1161 gaacttaataatgaatttatatgtcctaataacaaaagaataggttttaaaagatatgca 1220
            ||| ||||| | ||||| || ||||| ||||| ||| |  ||||||||||||||||||| 
Sbjct: 976  gaaattaatgacgaattcatttgtccgaataataaacggctaggttttaaaagatatgcc 1035

Query: 1221 taccgtaatgatagatatggttttaaacgagacttcaaactatatgaatgtgatgactgt 1280
            || ||| ||||||  ||||||| ||| |||||||||||| |||||||||||||||| |||
Sbjct: 1036 tatcgtcatgataagtatggttataagcgagacttcaaattatatgaatgtgatgattgt 1095

Query: 1281 tcatcatgttctttgagacatcaatgcatgaaaccaaattcgaaatccaataagaaaatc 1340
            |||  |||| || ||| | ||||||| |||||    ||||| ||| | || || ||||| 
Sbjct: 1096 tcagaatgtcctctgaaaaatcaatgtatgaacttcaattcaaaaacaaacaaaaaaata 1155

Query: 1341 atgaagaattataattgggaatactttaaagtccaaattaatcaaaagctttctgaacca 1400
            |||||||||||||| |||||||| ||||||  |||||||||  |||||||||| ||||||
Sbjct: 1156 atgaagaattataactgggaatattttaaatcccaaattaacaaaaagctttcagaacca 1215

Query: 1401 gaaacgaaaaacatctatagtcaaagaaaaattgatgtagagcctgcttttggatttatg 1460
            ||||| ||||| ||||| |||||||||||||||||||| || |||| |||||||||||||
Sbjct: 1216 gaaacaaaaaatatctacagtcaaagaaaaattgatgtggaacctgtttttggatttatg 1275

Query: 1461 aaggctattttgggtttcactcgaatgtcagttcgaggaataaataaagttaaacgagag 1520
            ||||||||||||||||||||||| ||||| || |||||| | |||||||| ||| |||| 
Sbjct: 1276 aaggctattttgggtttcactcggatgtctgtccgaggactcaataaagtcaaaagagaa 1335

Query: 1521 ctaggttttgtattgatggcacttaatataaggaaaa-tagcagctcaacgagctg 1575
            || ||||||||||| ||||||||||||||||| |||| ||| ||||||||||||||
Sbjct: 1336 cttggttttgtattaatggcacttaatataag-aaaagtagtagctcaacgagctg 1390


 Score = 438 bits (1129), Expect = e-123
 Identities = 306/396 (77%)
 Strand = Plus / Plus

Query: 403 atttttattgatggtacaaaagtagaagctaatgccaatagatatacatttgtgtggaag 462
           ||||||||||||||||||||| | ||||| ||||||||| ||||||||||||| ||||| 
Sbjct: 223 atttttattgatggtacaaaaattgaagcaaatgccaatcgatatacatttgtatggaaa 282

Query: 463 aaaagtattcaaaatcacgaatcgaaattgaacgaaaattcaaaaacattatatcgtgac 522
           || ||||||||||| || ||||| ||  |||| ||  |||| ||| |  | || | ||| 
Sbjct: 283 aagagtattcaaaaccatgaatcaaagatgaatgaggattctaaagccctctaccatgaa 342

Query: 523 ttagttgaagaaaaaataataccagagataaaagaagatggagatagcgatttaacaata 582
           || ||     | ||||| ||||| || || |||||||||   ||||  || ||||||| |
Sbjct: 343 ttggtaaccaataaaatcataccggaaattaaagaagatcatgataatgaattaacaaaa 402

Query: 583 gaagaaatagatttaattggtagtcatttagataaagaaatcgaagatttaaatcattct 642
           |||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||   |
Sbjct: 403 gaagaaatagatttgattggtagtcacttagataaagaaatcgaagatttaaaccaacat 462

Query: 643 attgagaacgaagattgtgctcaaattagaaaacagacccgtaaaaaaataactgagatt 702
           ||  | || ||| | ||| || |||  |||||||| |  |||   |||| |||| | || 
Sbjct: 463 atcaacaatgaaaaatgtactaaaacaagaaaacaaatacgtctcaaaagaactaaaatc 522

Query: 703 aagaagttcaaaaagaaatttgatgattattccgaaagaaaaaataaatatgaagaacaa 762
           || || | ||||||| || |  |||||||||  ||  ||||  ||  ||| |||   |||
Sbjct: 523 aaaaaatacaaaaagcaaatcaatgattattttgagcgaaagtatcgatacgaatttcaa 582

Query: 763 aaatcgattcttaaa-gatagaaatagtttttctaa 797
           ||||| ||| ||||| ||||||||||||| ||||||
Sbjct: 583 aaatctatt-ttaaaggatagaaatagttattctaa 617


 Score = 265 bits (685), Expect = 4e-71
 Identities = 172/211 (82%)
 Strand = Plus / Plus

Query: 188 tatatgcatatactcaatctgtattttctggtcgtagaatagaaaaattacttcatgaca 247
           ||||||| || || ||||||||||| || ||||||| |||||||||| | ||| |||| |
Sbjct: 8   tatatgcctacacacaatctgtattctcaggtcgtaaaatagaaaaaatgcttaatgata 67

Query: 248 gtattcgaatgatgtggttagctcaagatcaaacaccttcttataaaactattaatcgtt 307
           | || |||||||||||| || | ||| |||||| ||||||||||||||| |||||||  |
Sbjct: 68  gcatccgaatgatgtggctatcacaaaatcaaaaaccttcttataaaacaattaatcaat 127

Query: 308 ttagagtgaatcctaatactgatgcgttaattgaatctttatttattcagttccatagtc 367
           ||||||| ||||| ||    ||||| ||| | ||||||||||||||||| ||  | ||||
Sbjct: 128 ttagagtaaatccaaaagtagatgctttattagaatctttatttattcaattttacagtc 187

Query: 368 aatgtttaaagcaaaatcttat---tgataa 395
           | ||| |||| |||||||||||   ||||||
Sbjct: 188 agtgtgtaaaacaaaatcttatagatgataa 218


 Score = 234 bits (603), Expect = 1e-61
 Identities = 140/167 (84%)
 Strand = Plus / Plus

Query: 811 atgatgcaacttttatgagaatgaaggaagaccatatgaaaaatggccaacttaagccag 870
           ||||||| || |||||||||||||| ||||| || ||||||||||| |||||||||||||
Sbjct: 626 atgatgcgacatttatgagaatgaaagaagatcacatgaaaaatggacaacttaagccag 685

Query: 871 gatacaatttacaaatagcgacaaattctcaatttgttttatcctatgacctatttcaaa 930
           | || |||||||||||||| |||||||| |||||||||||||| ||| |  | | |||||
Sbjct: 686 ggtataatttacaaatagcaacaaattcccaatttgttttatcttataatgtgtatcaaa 745

Query: 931 acccaacagatactagaacattaatcccatttttaacaatgattcaa 977
           | ||||| |||||||||||  | || ||||||||||     ||||||
Sbjct: 746 atccaacggatactagaacgatgattccatttttaa-----attcaa 787


 Score = 27 bits (69), Expect = 3e+01
 Identities = 16/19 (84%)
 Strand = Plus / Plus

Query: 1623 aatagaaatcagctttttt 1641
            |||||||||   |||||||
Sbjct: 1437 aatagaaattgtctttttt 1455


 Score = 15 bits (39), Expect = 8e+04
 Identities = 8/8 (100%)
 Strand = Plus / Plus

Query: 1606 atttctat 1613
            ||||||||
Sbjct: 1421 atttctat 1428


 Score = 15 bits (39), Expect = 1e+05
 Identities = 8/8 (100%)
 Strand = Plus / Plus

Query: 1580 ttataaaa 1587
            ||||||||
Sbjct: 1407 ttataaaa 1414

8) SATW20_16870 in NC_017331


>NC_007793_R1|9|G9|87160780|YP_492755.1|Staphylococcus_aureus_subsp._aureus_USA300_FPR3757|-|8270..9781|-|SAUSA300_0034|IS1272, 
          Length = 1512

 Score = 840 bits (2169), Expect = e-244
 Identities = 508/596 (85%)
 Strand = Plus / Plus

Query: 981  accttcggttatttaccagagtatattgtagctgatgcaggttatggtagtgagcaaaac 1040
            |||| |||| ||||||| || ||||||||||||||||||||||||||||||||   ||| 
Sbjct: 796  acctacggtcatttacctgaatatattgtagctgatgcaggttatggtagtgaatcaaat 855

Query: 1041 tatatggctattatagatgattttaataaaacgccacttattacgtatggcatgtttatt 1100
            |||| ||| ||||||||||| ||||||  ||||||||| || || ||||| |||||||| 
Sbjct: 856  tataaggcaattatagatgactttaatcgaacgccactcataacatatggaatgtttata 915

Query: 1101 aaagataaaactagaaagtttaaaagtggcattttcaacactcaaaattggaaatatgac 1160
            ||||||||||||| ||| | |||||||| ||| || || |||||||||||||| ||||||
Sbjct: 916  aaagataaaactaaaaaatataaaagtgacatctttaatactcaaaattggaactatgac 975

Query: 1161 gaacttaataatgaatttatatgtcctaataacaaaagaataggttttaaaagatatgca 1220
            ||| ||||| | ||||| || ||||| ||||| ||| |  ||||||||||||||||||| 
Sbjct: 976  gaaattaatgacgaattcatttgtccgaataataaacggctaggttttaaaagatatgcc 1035

Query: 1221 taccgtaatgatagatatggttttaaacgagacttcaaactatatgaatgtgatgactgt 1280
            || ||| ||||||  ||||||| ||| |||||||||||| |||||||||||||||| |||
Sbjct: 1036 tatcgtcatgataagtatggttataagcgagacttcaaattatatgaatgtgatgattgt 1095

Query: 1281 tcatcatgttctttgagacatcaatgcatgaaaccaaattcgaaatccaataagaaaatc 1340
            |||  |||| || ||| | ||||||| |||||    ||||| ||| | || || ||||| 
Sbjct: 1096 tcagaatgtcctctgaaaaatcaatgtatgaacttcaattcaaaaacaaacaaaaaaata 1155

Query: 1341 atgaagaattataattgggaatactttaaagtccaaattaatcaaaagctttctgaacca 1400
            |||||||||||||| |||||||| ||||||  |||||||||  |||||||||| ||||||
Sbjct: 1156 atgaagaattataactgggaatattttaaatcccaaattaacaaaaagctttcagaacca 1215

Query: 1401 gaaacgaaaaacatctatagtcaaagaaaaattgatgtagagcctgcttttggatttatg 1460
            ||||| ||||| ||||| |||||||||||||||||||| || |||| |||||||||||||
Sbjct: 1216 gaaacaaaaaatatctacagtcaaagaaaaattgatgtggaacctgtttttggatttatg 1275

Query: 1461 aaggctattttgggtttcactcgaatgtcagttcgaggaataaataaagttaaacgagag 1520
            ||||||||||||||||||||||| ||||| || |||||| | |||||||| ||| |||| 
Sbjct: 1276 aaggctattttgggtttcactcggatgtctgtccgaggactcaataaagtcaaaagagaa 1335

Query: 1521 ctaggttttgtattgatggcacttaatataaggaaaa-tagcagctcaacgagctg 1575
            || ||||||||||| ||||||||||||||||| |||| ||| ||||||||||||||
Sbjct: 1336 cttggttttgtattaatggcacttaatataag-aaaagtagtagctcaacgagctg 1390


 Score = 438 bits (1129), Expect = e-123
 Identities = 306/396 (77%)
 Strand = Plus / Plus

Query: 403 atttttattgatggtacaaaagtagaagctaatgccaatagatatacatttgtgtggaag 462
           ||||||||||||||||||||| | ||||| ||||||||| ||||||||||||| ||||| 
Sbjct: 223 atttttattgatggtacaaaaattgaagcaaatgccaatcgatatacatttgtatggaaa 282

Query: 463 aaaagtattcaaaatcacgaatcgaaattgaacgaaaattcaaaaacattatatcgtgac 522
           || ||||||||||| || ||||| ||  |||| ||  |||| ||| |  | || | ||| 
Sbjct: 283 aagagtattcaaaaccatgaatcaaagatgaatgaggattctaaagccctctaccatgaa 342

Query: 523 ttagttgaagaaaaaataataccagagataaaagaagatggagatagcgatttaacaata 582
           || ||     | ||||| ||||| || || |||||||||   ||||  || ||||||| |
Sbjct: 343 ttggtaaccaataaaatcataccggaaattaaagaagatcatgataatgaattaacaaaa 402

Query: 583 gaagaaatagatttaattggtagtcatttagataaagaaatcgaagatttaaatcattct 642
           |||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||   |
Sbjct: 403 gaagaaatagatttgattggtagtcacttagataaagaaatcgaagatttaaaccaacat 462

Query: 643 attgagaacgaagattgtgctcaaattagaaaacagacccgtaaaaaaataactgagatt 702
           ||  | || ||| | ||| || |||  |||||||| |  |||   |||| |||| | || 
Sbjct: 463 atcaacaatgaaaaatgtactaaaacaagaaaacaaatacgtctcaaaagaactaaaatc 522

Query: 703 aagaagttcaaaaagaaatttgatgattattccgaaagaaaaaataaatatgaagaacaa 762
           || || | ||||||| || |  |||||||||  ||  ||||  ||  ||| |||   |||
Sbjct: 523 aaaaaatacaaaaagcaaatcaatgattattttgagcgaaagtatcgatacgaatttcaa 582

Query: 763 aaatcgattcttaaa-gatagaaatagtttttctaa 797
           ||||| ||| ||||| ||||||||||||| ||||||
Sbjct: 583 aaatctatt-ttaaaggatagaaatagttattctaa 617


 Score = 265 bits (685), Expect = 4e-71
 Identities = 172/211 (82%)
 Strand = Plus / Plus

Query: 188 tatatgcatatactcaatctgtattttctggtcgtagaatagaaaaattacttcatgaca 247
           ||||||| || || ||||||||||| || ||||||| |||||||||| | ||| |||| |
Sbjct: 8   tatatgcctacacacaatctgtattctcaggtcgtaaaatagaaaaaatgcttaatgata 67

Query: 248 gtattcgaatgatgtggttagctcaagatcaaacaccttcttataaaactattaatcgtt 307
           | || |||||||||||| || | ||| |||||| ||||||||||||||| |||||||  |
Sbjct: 68  gcatccgaatgatgtggctatcacaaaatcaaaaaccttcttataaaacaattaatcaat 127

Query: 308 ttagagtgaatcctaatactgatgcgttaattgaatctttatttattcagttccatagtc 367
           ||||||| ||||| ||    ||||| ||| | ||||||||||||||||| ||  | ||||
Sbjct: 128 ttagagtaaatccaaaagtagatgctttattagaatctttatttattcaattttacagtc 187

Query: 368 aatgtttaaagcaaaatcttat---tgataa 395
           | ||| |||| |||||||||||   ||||||
Sbjct: 188 agtgtgtaaaacaaaatcttatagatgataa 218


 Score = 234 bits (603), Expect = 1e-61
 Identities = 140/167 (84%)
 Strand = Plus / Plus

Query: 811 atgatgcaacttttatgagaatgaaggaagaccatatgaaaaatggccaacttaagccag 870
           ||||||| || |||||||||||||| ||||| || ||||||||||| |||||||||||||
Sbjct: 626 atgatgcgacatttatgagaatgaaagaagatcacatgaaaaatggacaacttaagccag 685

Query: 871 gatacaatttacaaatagcgacaaattctcaatttgttttatcctatgacctatttcaaa 930
           | || |||||||||||||| |||||||| |||||||||||||| ||| |  | | |||||
Sbjct: 686 ggtataatttacaaatagcaacaaattcccaatttgttttatcttataatgtgtatcaaa 745

Query: 931 acccaacagatactagaacattaatcccatttttaacaatgattcaa 977
           | ||||| |||||||||||  | || ||||||||||     ||||||
Sbjct: 746 atccaacggatactagaacgatgattccatttttaa-----attcaa 787


 Score = 27 bits (69), Expect = 3e+01
 Identities = 16/19 (84%)
 Strand = Plus / Plus

Query: 1623 aatagaaatcagctttttt 1641
            |||||||||   |||||||
Sbjct: 1437 aatagaaattgtctttttt 1455


 Score = 15 bits (39), Expect = 8e+04
 Identities = 8/8 (100%)
 Strand = Plus / Plus

Query: 1606 atttctat 1613
            ||||||||
Sbjct: 1421 atttctat 1428


 Score = 15 bits (39), Expect = 1e+05
 Identities = 8/8 (100%)
 Strand = Plus / Plus

Query: 1580 ttataaaa 1587
            ||||||||
Sbjct: 1407 ttataaaa 1414

9) SAUSA300_1643 in NC_007793


>NC_007793_R1|9|G9|87160780|YP_492755.1|Staphylococcus_aureus_subsp._aureus_USA300_FPR3757|-|8270..9781|-|SAUSA300_0034|IS1272, 
          Length = 1512

 Score = 840 bits (2169), Expect = e-244
 Identities = 508/596 (85%)
 Strand = Plus / Plus

Query: 981  accttcggttatttaccagagtatattgtagctgatgcaggttatggtagtgagcaaaac 1040
            |||| |||| ||||||| || ||||||||||||||||||||||||||||||||   ||| 
Sbjct: 796  acctacggtcatttacctgaatatattgtagctgatgcaggttatggtagtgaatcaaat 855

Query: 1041 tatatggctattatagatgattttaataaaacgccacttattacgtatggcatgtttatt 1100
            |||| ||| ||||||||||| ||||||  ||||||||| || || ||||| |||||||| 
Sbjct: 856  tataaggcaattatagatgactttaatcgaacgccactcataacatatggaatgtttata 915

Query: 1101 aaagataaaactagaaagtttaaaagtggcattttcaacactcaaaattggaaatatgac 1160
            ||||||||||||| ||| | |||||||| ||| || || |||||||||||||| ||||||
Sbjct: 916  aaagataaaactaaaaaatataaaagtgacatctttaatactcaaaattggaactatgac 975

Query: 1161 gaacttaataatgaatttatatgtcctaataacaaaagaataggttttaaaagatatgca 1220
            ||| ||||| | ||||| || ||||| ||||| ||| |  ||||||||||||||||||| 
Sbjct: 976  gaaattaatgacgaattcatttgtccgaataataaacggctaggttttaaaagatatgcc 1035

Query: 1221 taccgtaatgatagatatggttttaaacgagacttcaaactatatgaatgtgatgactgt 1280
            || ||| ||||||  ||||||| ||| |||||||||||| |||||||||||||||| |||
Sbjct: 1036 tatcgtcatgataagtatggttataagcgagacttcaaattatatgaatgtgatgattgt 1095

Query: 1281 tcatcatgttctttgagacatcaatgcatgaaaccaaattcgaaatccaataagaaaatc 1340
            |||  |||| || ||| | ||||||| |||||    ||||| ||| | || || ||||| 
Sbjct: 1096 tcagaatgtcctctgaaaaatcaatgtatgaacttcaattcaaaaacaaacaaaaaaata 1155

Query: 1341 atgaagaattataattgggaatactttaaagtccaaattaatcaaaagctttctgaacca 1400
            |||||||||||||| |||||||| ||||||  |||||||||  |||||||||| ||||||
Sbjct: 1156 atgaagaattataactgggaatattttaaatcccaaattaacaaaaagctttcagaacca 1215

Query: 1401 gaaacgaaaaacatctatagtcaaagaaaaattgatgtagagcctgcttttggatttatg 1460
            ||||| ||||| ||||| |||||||||||||||||||| || |||| |||||||||||||
Sbjct: 1216 gaaacaaaaaatatctacagtcaaagaaaaattgatgtggaacctgtttttggatttatg 1275

Query: 1461 aaggctattttgggtttcactcgaatgtcagttcgaggaataaataaagttaaacgagag 1520
            ||||||||||||||||||||||| ||||| || |||||| | |||||||| ||| |||| 
Sbjct: 1276 aaggctattttgggtttcactcggatgtctgtccgaggactcaataaagtcaaaagagaa 1335

Query: 1521 ctaggttttgtattgatggcacttaatataaggaaaa-tagcagctcaacgagctg 1575
            || ||||||||||| ||||||||||||||||| |||| ||| ||||||||||||||
Sbjct: 1336 cttggttttgtattaatggcacttaatataag-aaaagtagtagctcaacgagctg 1390


 Score = 438 bits (1129), Expect = e-123
 Identities = 306/396 (77%)
 Strand = Plus / Plus

Query: 403 atttttattgatggtacaaaagtagaagctaatgccaatagatatacatttgtgtggaag 462
           ||||||||||||||||||||| | ||||| ||||||||| ||||||||||||| ||||| 
Sbjct: 223 atttttattgatggtacaaaaattgaagcaaatgccaatcgatatacatttgtatggaaa 282

Query: 463 aaaagtattcaaaatcacgaatcgaaattgaacgaaaattcaaaaacattatatcgtgac 522
           || ||||||||||| || ||||| ||  |||| ||  |||| ||| |  | || | ||| 
Sbjct: 283 aagagtattcaaaaccatgaatcaaagatgaatgaggattctaaagccctctaccatgaa 342

Query: 523 ttagttgaagaaaaaataataccagagataaaagaagatggagatagcgatttaacaata 582
           || ||     | ||||| ||||| || || |||||||||   ||||  || ||||||| |
Sbjct: 343 ttggtaaccaataaaatcataccggaaattaaagaagatcatgataatgaattaacaaaa 402

Query: 583 gaagaaatagatttaattggtagtcatttagataaagaaatcgaagatttaaatcattct 642
           |||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||   |
Sbjct: 403 gaagaaatagatttgattggtagtcacttagataaagaaatcgaagatttaaaccaacat 462

Query: 643 attgagaacgaagattgtgctcaaattagaaaacagacccgtaaaaaaataactgagatt 702
           ||  | || ||| | ||| || |||  |||||||| |  |||   |||| |||| | || 
Sbjct: 463 atcaacaatgaaaaatgtactaaaacaagaaaacaaatacgtctcaaaagaactaaaatc 522

Query: 703 aagaagttcaaaaagaaatttgatgattattccgaaagaaaaaataaatatgaagaacaa 762
           || || | ||||||| || |  |||||||||  ||  ||||  ||  ||| |||   |||
Sbjct: 523 aaaaaatacaaaaagcaaatcaatgattattttgagcgaaagtatcgatacgaatttcaa 582

Query: 763 aaatcgattcttaaa-gatagaaatagtttttctaa 797
           ||||| ||| ||||| ||||||||||||| ||||||
Sbjct: 583 aaatctatt-ttaaaggatagaaatagttattctaa 617


 Score = 265 bits (685), Expect = 4e-71
 Identities = 172/211 (82%)
 Strand = Plus / Plus

Query: 188 tatatgcatatactcaatctgtattttctggtcgtagaatagaaaaattacttcatgaca 247
           ||||||| || || ||||||||||| || ||||||| |||||||||| | ||| |||| |
Sbjct: 8   tatatgcctacacacaatctgtattctcaggtcgtaaaatagaaaaaatgcttaatgata 67

Query: 248 gtattcgaatgatgtggttagctcaagatcaaacaccttcttataaaactattaatcgtt 307
           | || |||||||||||| || | ||| |||||| ||||||||||||||| |||||||  |
Sbjct: 68  gcatccgaatgatgtggctatcacaaaatcaaaaaccttcttataaaacaattaatcaat 127

Query: 308 ttagagtgaatcctaatactgatgcgttaattgaatctttatttattcagttccatagtc 367
           ||||||| ||||| ||    ||||| ||| | ||||||||||||||||| ||  | ||||
Sbjct: 128 ttagagtaaatccaaaagtagatgctttattagaatctttatttattcaattttacagtc 187

Query: 368 aatgtttaaagcaaaatcttat---tgataa 395
           | ||| |||| |||||||||||   ||||||
Sbjct: 188 agtgtgtaaaacaaaatcttatagatgataa 218


 Score = 234 bits (603), Expect = 1e-61
 Identities = 140/167 (84%)
 Strand = Plus / Plus

Query: 811 atgatgcaacttttatgagaatgaaggaagaccatatgaaaaatggccaacttaagccag 870
           ||||||| || |||||||||||||| ||||| || ||||||||||| |||||||||||||
Sbjct: 626 atgatgcgacatttatgagaatgaaagaagatcacatgaaaaatggacaacttaagccag 685

Query: 871 gatacaatttacaaatagcgacaaattctcaatttgttttatcctatgacctatttcaaa 930
           | || |||||||||||||| |||||||| |||||||||||||| ||| |  | | |||||
Sbjct: 686 ggtataatttacaaatagcaacaaattcccaatttgttttatcttataatgtgtatcaaa 745

Query: 931 acccaacagatactagaacattaatcccatttttaacaatgattcaa 977
           | ||||| |||||||||||  | || ||||||||||     ||||||
Sbjct: 746 atccaacggatactagaacgatgattccatttttaa-----attcaa 787


 Score = 27 bits (69), Expect = 3e+01
 Identities = 16/19 (84%)
 Strand = Plus / Plus

Query: 1623 aatagaaatcagctttttt 1641
            |||||||||   |||||||
Sbjct: 1437 aatagaaattgtctttttt 1455


 Score = 15 bits (39), Expect = 8e+04
 Identities = 8/8 (100%)
 Strand = Plus / Plus

Query: 1606 atttctat 1613
            ||||||||
Sbjct: 1421 atttctat 1428


 Score = 15 bits (39), Expect = 1e+05
 Identities = 8/8 (100%)
 Strand = Plus / Plus

Query: 1580 ttataaaa 1587
            ||||||||
Sbjct: 1407 ttataaaa 1414

10) SAEMRSA15_16950 in NC_017763


>NC_007793_R1|9|G9|87160780|YP_492755.1|Staphylococcus_aureus_subsp._aureus_USA300_FPR3757|-|8270..9781|-|SAUSA300_0034|IS1272, 
          Length = 1512

 Score = 833 bits (2151), Expect = e-242
 Identities = 509/596 (85%)
 Strand = Plus / Plus

Query: 949  accttcggttatttaccagagtatattgtagctgatgcaggttatggtagtgagcaaaac 1008
            |||| |||| ||||||| || ||||||||||||||||||||||||||||||||   ||| 
Sbjct: 796  acctacggtcatttacctgaatatattgtagctgatgcaggttatggtagtgaatcaaat 855

Query: 1009 tatatggctattatagatgattttaataaaacgccacttattacgtatggcatgtttatt 1068
            |||| ||| ||||||||||| ||||||  ||||||||| || || ||||| |||||||| 
Sbjct: 856  tataaggcaattatagatgactttaatcgaacgccactcataacatatggaatgtttata 915

Query: 1069 aaagataaaactagaaagtttaaaagtgacatttttaacactcaaaattggaaatatgac 1128
            ||||||||||||| ||| | |||||||||||| ||||| |||||||||||||| ||||||
Sbjct: 916  aaagataaaactaaaaaatataaaagtgacatctttaatactcaaaattggaactatgac 975

Query: 1129 gaacttaatgatgaatttatatgtcctaataacaaaagaataggttttaaaagatatgca 1188
            ||| ||||||| ||||| || ||||| ||||| ||| |  ||||||||||||||||||| 
Sbjct: 976  gaaattaatgacgaattcatttgtccgaataataaacggctaggttttaaaagatatgcc 1035

Query: 1189 taccgtaatgatagatatggttttaaacgtgacttcaagctataagaatgtgatgactgt 1248
            || ||| ||||||  ||||||| ||| || ||||||||  |||| ||||||||||| |||
Sbjct: 1036 tatcgtcatgataagtatggttataagcgagacttcaaattatatgaatgtgatgattgt 1095

Query: 1249 tcatcatgttctttgagacatcaatgcatgaagccaaattagaaatccaataagaaaatt 1308
            |||  |||| || ||| | ||||||| |||||    ||||  ||| | || || ||||| 
Sbjct: 1096 tcagaatgtcctctgaaaaatcaatgtatgaacttcaattcaaaaacaaacaaaaaaata 1155

Query: 1309 atgaagaattataattgggaattctttaaagcccaaattaatcaaaagctttctgaacca 1368
            |||||||||||||| |||||||  |||||| ||||||||||  |||||||||| ||||||
Sbjct: 1156 atgaagaattataactgggaatattttaaatcccaaattaacaaaaagctttcagaacca 1215

Query: 1369 gaaacgaaaaaaatctatagtcaaagaaaaattgatgtagagcctgtttttggatttatg 1428
            ||||| ||||| ||||| |||||||||||||||||||| || ||||||||||||||||||
Sbjct: 1216 gaaacaaaaaatatctacagtcaaagaaaaattgatgtggaacctgtttttggatttatg 1275

Query: 1429 aaggctattttgggtttcactcgaatgtcagttcgaggaataaataaagttaaacgagag 1488
            ||||||||||||||||||||||| ||||| || |||||| | |||||||| ||| |||| 
Sbjct: 1276 aaggctattttgggtttcactcggatgtctgtccgaggactcaataaagtcaaaagagaa 1335

Query: 1489 ctaggttttgtattaatggcacttaatataaggaaaa-tagcagctcaacgagctg 1543
            || ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||
Sbjct: 1336 cttggttttgtattaatggcacttaatataag-aaaagtagtagctcaacgagctg 1390


 Score = 301 bits (778), Expect = 6e-82
 Identities = 190/233 (82%)
 Strand = Plus / Plus

Query: 379 atttttattgatggtacataagtagaagctaatgccaatagatatacatttgtgtggaag 438
           |||||||||||||||||| || | ||||| ||||||||| ||||||||||||| ||||| 
Sbjct: 223 atttttattgatggtacaaaaattgaagcaaatgccaatcgatatacatttgtatggaaa 282

Query: 439 aaaagtattcaaaatcacgaatcgaaattgaacgaaaattcaaaagcattatatcgtgac 498
           || ||||||||||| || ||||| ||  |||| ||  |||| |||||  | || | ||| 
Sbjct: 283 aagagtattcaaaaccatgaatcaaagatgaatgaggattctaaagccctctaccatgaa 342

Query: 499 ttagttgaagaaaaaataataccagagataaaagaagatggagatagcgatttaacaata 558
           || ||     | ||||| ||||| || || |||||||||   ||||  || ||||||| |
Sbjct: 343 ttggtaaccaataaaatcataccggaaattaaagaagatcatgataatgaattaacaaaa 402

Query: 559 gaagaaatagatttaattggtagtcatttagataaagaaatcgaagatttaaa 611
           |||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 403 gaagaaatagatttgattggtagtcacttagataaagaaatcgaagatttaaa 455


 Score = 217 bits (560), Expect = 1e-56
 Identities = 138/167 (83%)
 Strand = Plus / Plus

Query: 781 atgatgcaacttttatgagaatgaaggaagaccatatgaaaaatggccaacttaagccag 840
           ||||||| || |||||||||||||| ||||| || ||||||||||| |||||||||||||
Sbjct: 626 atgatgcgacatttatgagaatgaaagaagatcacatgaaaaatggacaacttaagccag 685

Query: 841 gatacaatttacaaatagcgacaaattctcaattt--tttatcctatgacctatttcaaa 898
           | || |||||||||||||| |||||||| ||||||  |||||| ||| |  | | |||||
Sbjct: 686 ggtataatttacaaatagcaacaaattcccaatttgttttatcttataatgtgtatcaaa 745

Query: 899 ccccaacagatactagaactttaattccatttttaacaatgattcaa 945
             ||||| |||||||||||  | |||||||||||||     ||||||
Sbjct: 746 atccaacggatactagaacgatgattccatttttaa-----attcaa 787


 Score = 178 bits (460), Expect = 6e-45
 Identities = 119/146 (82%)
 Strand = Plus / Plus

Query: 229 cgaatgatgtggttagctcaaaatcaaacaccttcttataaaactattaatcgttttaga 288
           |||||||||||| || | |||||||||| ||||||||||||||| |||||||  ||||||
Sbjct: 73  cgaatgatgtggctatcacaaaatcaaaaaccttcttataaaacaattaatcaatttaga 132

Query: 289 gtgaatcctaatactgatgcgttaatttaatctttatttattcagttccatagtcaatgt 348
           || ||||| ||    ||||| ||| |  |||||||||||||||| ||  | ||||| |||
Sbjct: 133 gtaaatccaaaagtagatgctttattagaatctttatttattcaattttacagtcagtgt 192

Query: 349 ttaaagcaaaatcttat---tgataa 371
            |||| |||||||||||   ||||||
Sbjct: 193 gtaaaacaaaatcttatagatgataa 218


 Score = 27 bits (69), Expect = 3e+01
 Identities = 16/19 (84%)
 Strand = Plus / Plus

Query: 1591 aatagaaatcagctttttt 1609
            |||||||||   |||||||
Sbjct: 1437 aatagaaattgtctttttt 1455


 Score = 15 bits (39), Expect = 8e+04
 Identities = 8/8 (100%)
 Strand = Plus / Plus

Query: 1574 atttctat 1581
            ||||||||
Sbjct: 1421 atttctat 1428


 Score = 15 bits (39), Expect = 1e+05
 Identities = 8/8 (100%)
 Strand = Plus / Plus

Query: 1548 ttataaaa 1555
            ||||||||
Sbjct: 1407 ttataaaa 1414

11) SACOL1834 in NC_002951


>NC_007793_R1|9|G9|87160780|YP_492755.1|Staphylococcus_aureus_subsp._aureus_USA300_FPR3757|-|8270..9781|-|SAUSA300_0034|IS1272, 
          Length = 1512

 Score = 805 bits (2078), Expect = e-233
 Identities = 488/571 (85%)
 Strand = Plus / Plus

Query: 964  ttgtagctgatgcaggttatggtagtgagcaaaactatatggccattatagatgatttta 1023
            ||||||||||||||||||||||||||||   ||| |||| ||| ||||||||||| ||||
Sbjct: 821  ttgtagctgatgcaggttatggtagtgaatcaaattataaggcaattatagatgacttta 880

Query: 1024 ataaaacgccacttattacgtatggcatgtttattaaagataaaactagaaagtttaaaa 1083
            ||  ||||||||| || || ||||| |||||||| ||||||||||||| ||| | |||||
Sbjct: 881  atcgaacgccactcataacatatggaatgtttataaaagataaaactaaaaaatataaaa 940

Query: 1084 gtgacattttcaacactcaaaattggaaatatgacgaacttaatgatgaatttatatgtc 1143
            ||||||| || || |||||||||||||| ||||||||| ||||||| ||||| || ||||
Sbjct: 941  gtgacatctttaatactcaaaattggaactatgacgaaattaatgacgaattcatttgtc 1000

Query: 1144 ctaataacaaaagaataggttttaaaagatatgcataccgtaatgatagatatggtttta 1203
            | ||||| ||| |  ||||||||||||||||||| || ||| ||||||  ||||||| ||
Sbjct: 1001 cgaataataaacggctaggttttaaaagatatgcctatcgtcatgataagtatggttata 1060

Query: 1204 aacgagacttcaaactatatgaatgcgatgactgttcagcatgttctttgaggcaacaat 1263
            | |||||||||||| |||||||||| ||||| ||||||| |||| || |||   | ||||
Sbjct: 1061 agcgagacttcaaattatatgaatgtgatgattgttcagaatgtcctctgaaaaatcaat 1120

Query: 1264 gcatgaaaccaaattcaaaatccaataagaaaatcatgaagaattataattgggaatact 1323
            | |||||    ||||||||| | || || ||||| |||||||||||||| |||||||| |
Sbjct: 1121 gtatgaacttcaattcaaaaacaaacaaaaaaataatgaagaattataactgggaatatt 1180

Query: 1324 ttaaagtccaaattaatcaaaagctttctgaaccagaaacgaaaaaaatctatagtcaaa 1383
            |||||  |||||||||  |||||||||| ||||||||||| ||||| ||||| |||||||
Sbjct: 1181 ttaaatcccaaattaacaaaaagctttcagaaccagaaacaaaaaatatctacagtcaaa 1240

Query: 1384 gaaaaattgatgtagagcctgtttttggatttatgaaggctattttgggtttaactcgaa 1443
            ||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 1241 gaaaaattgatgtggaacctgtttttggatttatgaaggctattttgggtttcactcgga 1300

Query: 1444 cgtcagttcgaggaataaataaagttaaacgagagctaggttttgtattaatggcactta 1503
             ||| || |||||| | |||||||| ||| |||| || ||||||||||||||||||||||
Sbjct: 1301 tgtctgtccgaggactcaataaagtcaaaagagaacttggttttgtattaatggcactta 1360

Query: 1504 atataaggaaaa-tagcagctcaacgagctg 1533
            ||||||| |||| ||| ||||||||||||||
Sbjct: 1361 atataag-aaaagtagtagctcaacgagctg 1390


 Score = 693 bits (1788), Expect = e-200
 Identities = 451/570 (79%)
 Strand = Plus / Plus

Query: 379 atttttattgatggtacaaaagtagaagctaatgccaatagatatacatttgtgtggaag 438
           ||||||||||||||||||||| | ||||| ||||||||| ||||||||||||| ||||| 
Sbjct: 223 atttttattgatggtacaaaaattgaagcaaatgccaatcgatatacatttgtatggaaa 282

Query: 439 aaaagtattcaaaatcacgaatcgaaattgaacgaaaattcaaaagcattatatcgtgac 498
           || ||||||||||| || ||||| ||  |||| ||  |||| |||||  | || | ||| 
Sbjct: 283 aagagtattcaaaaccatgaatcaaagatgaatgaggattctaaagccctctaccatgaa 342

Query: 499 ttagttgaagaaaaaataataccagagataaaagaagatggagatagcgatttaacaata 558
           || ||     | ||||| ||||| || || |||||||||   ||||  || ||||||| |
Sbjct: 343 ttggtaaccaataaaatcataccggaaattaaagaagatcatgataatgaattaacaaaa 402

Query: 559 gaagaaatagatttaattggtagtcatttagataaagaaatcgaagatttaaatcattct 618
           |||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||   |
Sbjct: 403 gaagaaatagatttgattggtagtcacttagataaagaaatcgaagatttaaaccaacat 462

Query: 619 attgagaacgaagattgtgctcaaattagaaaacagacccgtaaaaaaagaactgagatt 678
           ||  | || ||| | ||| || |||  |||||||| |  |||   ||||||||| | || 
Sbjct: 463 atcaacaatgaaaaatgtactaaaacaagaaaacaaatacgtctcaaaagaactaaaatc 522

Query: 679 aagaagttcaaaaagaaatttgatgattattccgaaagaaaaaataaatatgaagaacaa 738
           || || | ||||||| || |  |||||||||  ||  ||||  ||  ||| |||   |||
Sbjct: 523 aaaaaatacaaaaagcaaatcaatgattattttgagcgaaagtatcgatacgaatttcaa 582

Query: 739 aaatcgattcttaaagatagaaatagtttttctaaaactgatcatgatgcaacttttatg 798
           ||||| ||| | || ||||||||||||| |||||| || ||| ||||||| || ||||||
Sbjct: 583 aaatctattttaaaggatagaaatagttattctaagacagattatgatgcgacatttatg 642

Query: 799 agaatgaaggaagaccatatgaaaaatggccaacttaagccaggatacaatttacaaata 858
           |||||||| ||||| || ||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 643 agaatgaaagaagatcacatgaaaaatggacaacttaagccagggtataatttacaaata 702

Query: 859 gcgacaaattctcaatttgttttatcctatgacctatttcaaaacccgacagatactaga 918
           || |||||||| |||||||||||||| ||| |  | | |||||| || || |||||||||
Sbjct: 703 gcaacaaattcccaatttgttttatcttataatgtgtatcaaaatccaacggatactaga 762

Query: 919 actttaattccatttttaacaatgattcaa 948
           ||  | |||||||||||||     ||||||
Sbjct: 763 acgatgattccatttttaa-----attcaa 787


 Score = 183 bits (472), Expect = 3e-46
 Identities = 120/146 (82%)
 Strand = Plus / Plus

Query: 229 cgaatgatgtggttagctcaaaatcaaacaccttcttataaaactattaatcgttttaga 288
           |||||||||||| || | |||||||||| ||||||||||||||| |||||||  ||||||
Sbjct: 73  cgaatgatgtggctatcacaaaatcaaaaaccttcttataaaacaattaatcaatttaga 132

Query: 289 gtgaatcctaatactgatgcgttaattgaatctttatttattcagttccatagtcaatgt 348
           || ||||| ||    ||||| ||| | ||||||||||||||||| ||  | ||||| |||
Sbjct: 133 gtaaatccaaaagtagatgctttattagaatctttatttattcaattttacagtcagtgt 192

Query: 349 ttaaagcaaaatcttat---tgataa 371
            |||| |||||||||||   ||||||
Sbjct: 193 gtaaaacaaaatcttatagatgataa 218


 Score = 27 bits (69), Expect = 3e+01
 Identities = 16/19 (84%)
 Strand = Plus / Plus

Query: 1581 aatagaaatcagctttttt 1599
            |||||||||   |||||||
Sbjct: 1437 aatagaaattgtctttttt 1455


 Score = 15 bits (39), Expect = 8e+04
 Identities = 8/8 (100%)
 Strand = Plus / Plus

Query: 1564 atttctat 1571
            ||||||||
Sbjct: 1421 atttctat 1428


 Score = 15 bits (39), Expect = 1e+05
 Identities = 8/8 (100%)
 Strand = Plus / Plus

Query: 1538 ttataaaa 1545
            ||||||||
Sbjct: 1407 ttataaaa 1414

12) SATW20_17750 in NC_017331


>NC_007793_R1|9|G9|87160780|YP_492755.1|Staphylococcus_aureus_subsp._aureus_USA300_FPR3757|-|8270..9781|-|SAUSA300_0034|IS1272, 
          Length = 1512

 Score = 805 bits (2078), Expect = e-233
 Identities = 488/571 (85%)
 Strand = Plus / Plus

Query: 820  ttgtagctgatgcaggttatggtagtgagcaaaactatatggccattatagatgatttta 879
            ||||||||||||||||||||||||||||   ||| |||| ||| ||||||||||| ||||
Sbjct: 821  ttgtagctgatgcaggttatggtagtgaatcaaattataaggcaattatagatgacttta 880

Query: 880  ataaaacgccacttattacgtatggcatgtttattaaagataaaactagaaagtttaaaa 939
            ||  ||||||||| || || ||||| |||||||| ||||||||||||| ||| | |||||
Sbjct: 881  atcgaacgccactcataacatatggaatgtttataaaagataaaactaaaaaatataaaa 940

Query: 940  gtgacattttcaacactcaaaattggaaatatgacgaacttaatgatgaatttatatgtc 999
            ||||||| || || |||||||||||||| ||||||||| ||||||| ||||| || ||||
Sbjct: 941  gtgacatctttaatactcaaaattggaactatgacgaaattaatgacgaattcatttgtc 1000

Query: 1000 ctaataacaaaagaataggttttaaaagatatgcataccgtaatgatagatatggtttta 1059
            | ||||| ||| |  ||||||||||||||||||| || ||| ||||||  ||||||| ||
Sbjct: 1001 cgaataataaacggctaggttttaaaagatatgcctatcgtcatgataagtatggttata 1060

Query: 1060 aacgagacttcaaactatatgaatgcgatgactgttcagcatgttctttgaggcaacaat 1119
            | |||||||||||| |||||||||| ||||| ||||||| |||| || |||   | ||||
Sbjct: 1061 agcgagacttcaaattatatgaatgtgatgattgttcagaatgtcctctgaaaaatcaat 1120

Query: 1120 gcatgaaaccaaattcaaaatccaataagaaaatcatgaagaattataattgggaatact 1179
            | |||||    ||||||||| | || || ||||| |||||||||||||| |||||||| |
Sbjct: 1121 gtatgaacttcaattcaaaaacaaacaaaaaaataatgaagaattataactgggaatatt 1180

Query: 1180 ttaaagtccaaattaatcaaaagctttctgaaccagaaacgaaaaaaatctatagtcaaa 1239
            |||||  |||||||||  |||||||||| ||||||||||| ||||| ||||| |||||||
Sbjct: 1181 ttaaatcccaaattaacaaaaagctttcagaaccagaaacaaaaaatatctacagtcaaa 1240

Query: 1240 gaaaaattgatgtagagcctgtttttggatttatgaaggctattttgggtttaactcgaa 1299
            ||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 1241 gaaaaattgatgtggaacctgtttttggatttatgaaggctattttgggtttcactcgga 1300

Query: 1300 cgtcagttcgaggaataaataaagttaaacgagagctaggttttgtattaatggcactta 1359
             ||| || |||||| | |||||||| ||| |||| || ||||||||||||||||||||||
Sbjct: 1301 tgtctgtccgaggactcaataaagtcaaaagagaacttggttttgtattaatggcactta 1360

Query: 1360 atataaggaaaa-tagcagctcaacgagctg 1389
            ||||||| |||| ||| ||||||||||||||
Sbjct: 1361 atataag-aaaagtagtagctcaacgagctg 1390


 Score = 693 bits (1788), Expect = e-200
 Identities = 451/570 (79%)
 Strand = Plus / Plus

Query: 235 atttttattgatggtacaaaagtagaagctaatgccaatagatatacatttgtgtggaag 294
           ||||||||||||||||||||| | ||||| ||||||||| ||||||||||||| ||||| 
Sbjct: 223 atttttattgatggtacaaaaattgaagcaaatgccaatcgatatacatttgtatggaaa 282

Query: 295 aaaagtattcaaaatcacgaatcgaaattgaacgaaaattcaaaagcattatatcgtgac 354
           || ||||||||||| || ||||| ||  |||| ||  |||| |||||  | || | ||| 
Sbjct: 283 aagagtattcaaaaccatgaatcaaagatgaatgaggattctaaagccctctaccatgaa 342

Query: 355 ttagttgaagaaaaaataataccagagataaaagaagatggagatagcgatttaacaata 414
           || ||     | ||||| ||||| || || |||||||||   ||||  || ||||||| |
Sbjct: 343 ttggtaaccaataaaatcataccggaaattaaagaagatcatgataatgaattaacaaaa 402

Query: 415 gaagaaatagatttaattggtagtcatttagataaagaaatcgaagatttaaatcattct 474
           |||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||   |
Sbjct: 403 gaagaaatagatttgattggtagtcacttagataaagaaatcgaagatttaaaccaacat 462

Query: 475 attgagaacgaagattgtgctcaaattagaaaacagacccgtaaaaaaagaactgagatt 534
           ||  | || ||| | ||| || |||  |||||||| |  |||   ||||||||| | || 
Sbjct: 463 atcaacaatgaaaaatgtactaaaacaagaaaacaaatacgtctcaaaagaactaaaatc 522

Query: 535 aagaagttcaaaaagaaatttgatgattattccgaaagaaaaaataaatatgaagaacaa 594
           || || | ||||||| || |  |||||||||  ||  ||||  ||  ||| |||   |||
Sbjct: 523 aaaaaatacaaaaagcaaatcaatgattattttgagcgaaagtatcgatacgaatttcaa 582

Query: 595 aaatcgattcttaaagatagaaatagtttttctaaaactgatcatgatgcaacttttatg 654
           ||||| ||| | || ||||||||||||| |||||| || ||| ||||||| || ||||||
Sbjct: 583 aaatctattttaaaggatagaaatagttattctaagacagattatgatgcgacatttatg 642

Query: 655 agaatgaaggaagaccatatgaaaaatggccaacttaagccaggatacaatttacaaata 714
           |||||||| ||||| || ||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 643 agaatgaaagaagatcacatgaaaaatggacaacttaagccagggtataatttacaaata 702

Query: 715 gcgacaaattctcaatttgttttatcctatgacctatttcaaaacccgacagatactaga 774
           || |||||||| |||||||||||||| ||| |  | | |||||| || || |||||||||
Sbjct: 703 gcaacaaattcccaatttgttttatcttataatgtgtatcaaaatccaacggatactaga 762

Query: 775 actttaattccatttttaacaatgattcaa 804
           ||  | |||||||||||||     ||||||
Sbjct: 763 acgatgattccatttttaa-----attcaa 787


 Score = 261 bits (673), Expect = 9e-70
 Identities = 171/211 (81%)
 Strand = Plus / Plus

Query: 20  tatatgcatatactcaatctgtattttctggtcgaagaatagagaaattacttcatgaca 79
           ||||||| || || ||||||||||| || ||||| | |||||| ||| | ||| |||| |
Sbjct: 8   tatatgcctacacacaatctgtattctcaggtcgtaaaatagaaaaaatgcttaatgata 67

Query: 80  gtattcgaatgatgtggttagctcaaaatcaaacaccttcttataaaactattaatcgtt 139
           | || |||||||||||| || | |||||||||| ||||||||||||||| |||||||  |
Sbjct: 68  gcatccgaatgatgtggctatcacaaaatcaaaaaccttcttataaaacaattaatcaat 127

Query: 140 ttagagtgaatcctaatactgatgcgttaattgaatctttatttattcagttccatagtc 199
           ||||||| ||||| ||    ||||| ||| | ||||||||||||||||| ||  | ||||
Sbjct: 128 ttagagtaaatccaaaagtagatgctttattagaatctttatttattcaattttacagtc 187

Query: 200 aatgtttaaagcaaaatcttat---tgataa 227
           | ||| |||| |||||||||||   ||||||
Sbjct: 188 agtgtgtaaaacaaaatcttatagatgataa 218


 Score = 27 bits (69), Expect = 3e+01
 Identities = 16/19 (84%)
 Strand = Plus / Plus

Query: 1437 aatagaaatcagctttttt 1455
            |||||||||   |||||||
Sbjct: 1437 aatagaaattgtctttttt 1455


 Score = 15 bits (39), Expect = 8e+04
 Identities = 8/8 (100%)
 Strand = Plus / Plus

Query: 1420 atttctat 1427
            ||||||||
Sbjct: 1421 atttctat 1428


 Score = 15 bits (39), Expect = 1e+05
 Identities = 8/8 (100%)
 Strand = Plus / Plus

Query: 1394 ttataaaa 1401
            ||||||||
Sbjct: 1407 ttataaaa 1414

13) SAUSA300_1727 in NC_007793


>NC_007793_R1|9|G9|87160780|YP_492755.1|Staphylococcus_aureus_subsp._aureus_USA300_FPR3757|-|8270..9781|-|SAUSA300_0034|IS1272, 
          Length = 1512

 Score = 805 bits (2078), Expect = e-233
 Identities = 488/571 (85%)
 Strand = Plus / Plus

Query: 820  ttgtagctgatgcaggttatggtagtgagcaaaactatatggccattatagatgatttta 879
            ||||||||||||||||||||||||||||   ||| |||| ||| ||||||||||| ||||
Sbjct: 821  ttgtagctgatgcaggttatggtagtgaatcaaattataaggcaattatagatgacttta 880

Query: 880  ataaaacgccacttattacgtatggcatgtttattaaagataaaactagaaagtttaaaa 939
            ||  ||||||||| || || ||||| |||||||| ||||||||||||| ||| | |||||
Sbjct: 881  atcgaacgccactcataacatatggaatgtttataaaagataaaactaaaaaatataaaa 940

Query: 940  gtgacattttcaacactcaaaattggaaatatgacgaacttaatgatgaatttatatgtc 999
            ||||||| || || |||||||||||||| ||||||||| ||||||| ||||| || ||||
Sbjct: 941  gtgacatctttaatactcaaaattggaactatgacgaaattaatgacgaattcatttgtc 1000

Query: 1000 ctaataacaaaagaataggttttaaaagatatgcataccgtaatgatagatatggtttta 1059
            | ||||| ||| |  ||||||||||||||||||| || ||| ||||||  ||||||| ||
Sbjct: 1001 cgaataataaacggctaggttttaaaagatatgcctatcgtcatgataagtatggttata 1060

Query: 1060 aacgagacttcaaactatatgaatgcgatgactgttcagcatgttctttgaggcaacaat 1119
            | |||||||||||| |||||||||| ||||| ||||||| |||| || |||   | ||||
Sbjct: 1061 agcgagacttcaaattatatgaatgtgatgattgttcagaatgtcctctgaaaaatcaat 1120

Query: 1120 gcatgaaaccaaattcaaaatccaataagaaaatcatgaagaattataattgggaatact 1179
            | |||||    ||||||||| | || || ||||| |||||||||||||| |||||||| |
Sbjct: 1121 gtatgaacttcaattcaaaaacaaacaaaaaaataatgaagaattataactgggaatatt 1180

Query: 1180 ttaaagtccaaattaatcaaaagctttctgaaccagaaacgaaaaaaatctatagtcaaa 1239
            |||||  |||||||||  |||||||||| ||||||||||| ||||| ||||| |||||||
Sbjct: 1181 ttaaatcccaaattaacaaaaagctttcagaaccagaaacaaaaaatatctacagtcaaa 1240

Query: 1240 gaaaaattgatgtagagcctgtttttggatttatgaaggctattttgggtttaactcgaa 1299
            ||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 1241 gaaaaattgatgtggaacctgtttttggatttatgaaggctattttgggtttcactcgga 1300

Query: 1300 cgtcagttcgaggaataaataaagttaaacgagagctaggttttgtattaatggcactta 1359
             ||| || |||||| | |||||||| ||| |||| || ||||||||||||||||||||||
Sbjct: 1301 tgtctgtccgaggactcaataaagtcaaaagagaacttggttttgtattaatggcactta 1360

Query: 1360 atataaggaaaa-tagcagctcaacgagctg 1389
            ||||||| |||| ||| ||||||||||||||
Sbjct: 1361 atataag-aaaagtagtagctcaacgagctg 1390


 Score = 693 bits (1788), Expect = e-200
 Identities = 451/570 (79%)
 Strand = Plus / Plus

Query: 235 atttttattgatggtacaaaagtagaagctaatgccaatagatatacatttgtgtggaag 294
           ||||||||||||||||||||| | ||||| ||||||||| ||||||||||||| ||||| 
Sbjct: 223 atttttattgatggtacaaaaattgaagcaaatgccaatcgatatacatttgtatggaaa 282

Query: 295 aaaagtattcaaaatcacgaatcgaaattgaacgaaaattcaaaagcattatatcgtgac 354
           || ||||||||||| || ||||| ||  |||| ||  |||| |||||  | || | ||| 
Sbjct: 283 aagagtattcaaaaccatgaatcaaagatgaatgaggattctaaagccctctaccatgaa 342

Query: 355 ttagttgaagaaaaaataataccagagataaaagaagatggagatagcgatttaacaata 414
           || ||     | ||||| ||||| || || |||||||||   ||||  || ||||||| |
Sbjct: 343 ttggtaaccaataaaatcataccggaaattaaagaagatcatgataatgaattaacaaaa 402

Query: 415 gaagaaatagatttaattggtagtcatttagataaagaaatcgaagatttaaatcattct 474
           |||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||   |
Sbjct: 403 gaagaaatagatttgattggtagtcacttagataaagaaatcgaagatttaaaccaacat 462

Query: 475 attgagaacgaagattgtgctcaaattagaaaacagacccgtaaaaaaagaactgagatt 534
           ||  | || ||| | ||| || |||  |||||||| |  |||   ||||||||| | || 
Sbjct: 463 atcaacaatgaaaaatgtactaaaacaagaaaacaaatacgtctcaaaagaactaaaatc 522

Query: 535 aagaagttcaaaaagaaatttgatgattattccgaaagaaaaaataaatatgaagaacaa 594
           || || | ||||||| || |  |||||||||  ||  ||||  ||  ||| |||   |||
Sbjct: 523 aaaaaatacaaaaagcaaatcaatgattattttgagcgaaagtatcgatacgaatttcaa 582

Query: 595 aaatcgattcttaaagatagaaatagtttttctaaaactgatcatgatgcaacttttatg 654
           ||||| ||| | || ||||||||||||| |||||| || ||| ||||||| || ||||||
Sbjct: 583 aaatctattttaaaggatagaaatagttattctaagacagattatgatgcgacatttatg 642

Query: 655 agaatgaaggaagaccatatgaaaaatggccaacttaagccaggatacaatttacaaata 714
           |||||||| ||||| || ||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 643 agaatgaaagaagatcacatgaaaaatggacaacttaagccagggtataatttacaaata 702

Query: 715 gcgacaaattctcaatttgttttatcctatgacctatttcaaaacccgacagatactaga 774
           || |||||||| |||||||||||||| ||| |  | | |||||| || || |||||||||
Sbjct: 703 gcaacaaattcccaatttgttttatcttataatgtgtatcaaaatccaacggatactaga 762

Query: 775 actttaattccatttttaacaatgattcaa 804
           ||  | |||||||||||||     ||||||
Sbjct: 763 acgatgattccatttttaa-----attcaa 787


 Score = 261 bits (673), Expect = 9e-70
 Identities = 171/211 (81%)
 Strand = Plus / Plus

Query: 20  tatatgcatatactcaatctgtattttctggtcgaagaatagagaaattacttcatgaca 79
           ||||||| || || ||||||||||| || ||||| | |||||| ||| | ||| |||| |
Sbjct: 8   tatatgcctacacacaatctgtattctcaggtcgtaaaatagaaaaaatgcttaatgata 67

Query: 80  gtattcgaatgatgtggttagctcaaaatcaaacaccttcttataaaactattaatcgtt 139
           | || |||||||||||| || | |||||||||| ||||||||||||||| |||||||  |
Sbjct: 68  gcatccgaatgatgtggctatcacaaaatcaaaaaccttcttataaaacaattaatcaat 127

Query: 140 ttagagtgaatcctaatactgatgcgttaattgaatctttatttattcagttccatagtc 199
           ||||||| ||||| ||    ||||| ||| | ||||||||||||||||| ||  | ||||
Sbjct: 128 ttagagtaaatccaaaagtagatgctttattagaatctttatttattcaattttacagtc 187

Query: 200 aatgtttaaagcaaaatcttat---tgataa 227
           | ||| |||| |||||||||||   ||||||
Sbjct: 188 agtgtgtaaaacaaaatcttatagatgataa 218


 Score = 27 bits (69), Expect = 3e+01
 Identities = 16/19 (84%)
 Strand = Plus / Plus

Query: 1437 aatagaaatcagctttttt 1455
            |||||||||   |||||||
Sbjct: 1437 aatagaaattgtctttttt 1455


 Score = 15 bits (39), Expect = 8e+04
 Identities = 8/8 (100%)
 Strand = Plus / Plus

Query: 1420 atttctat 1427
            ||||||||
Sbjct: 1421 atttctat 1428


 Score = 15 bits (39), Expect = 1e+05
 Identities = 8/8 (100%)
 Strand = Plus / Plus

Query: 1394 ttataaaa 1401
            ||||||||
Sbjct: 1407 ttataaaa 1414

14) SAOUHSC_01905 in NC_007795


>NC_007793_R1|9|G9|87160780|YP_492755.1|Staphylococcus_aureus_subsp._aureus_USA300_FPR3757|-|8270..9781|-|SAUSA300_0034|IS1272, 
          Length = 1512

 Score = 693 bits (1788), Expect = e-200
 Identities = 451/570 (79%)
 Strand = Plus / Plus

Query: 235 atttttattgatggtacaaaagtagaagctaatgccaatagatatacatttgtgtggaag 294
           ||||||||||||||||||||| | ||||| ||||||||| ||||||||||||| ||||| 
Sbjct: 223 atttttattgatggtacaaaaattgaagcaaatgccaatcgatatacatttgtatggaaa 282

Query: 295 aaaagtattcaaaatcacgaatcgaaattgaacgaaaattcaaaagcattatatcgtgac 354
           || ||||||||||| || ||||| ||  |||| ||  |||| |||||  | || | ||| 
Sbjct: 283 aagagtattcaaaaccatgaatcaaagatgaatgaggattctaaagccctctaccatgaa 342

Query: 355 ttagttgaagaaaaaataataccagagataaaagaagatggagatagcgatttaacaata 414
           || ||     | ||||| ||||| || || |||||||||   ||||  || ||||||| |
Sbjct: 343 ttggtaaccaataaaatcataccggaaattaaagaagatcatgataatgaattaacaaaa 402

Query: 415 gaagaaatagatttaattggtagtcatttagataaagaaatcgaagatttaaatcattct 474
           |||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||   |
Sbjct: 403 gaagaaatagatttgattggtagtcacttagataaagaaatcgaagatttaaaccaacat 462

Query: 475 attgagaacgaagattgtgctcaaattagaaaacagacccgtaaaaaaagaactgagatt 534
           ||  | || ||| | ||| || |||  |||||||| |  |||   ||||||||| | || 
Sbjct: 463 atcaacaatgaaaaatgtactaaaacaagaaaacaaatacgtctcaaaagaactaaaatc 522

Query: 535 aagaagttcaaaaagaaatttgatgattattccgaaagaaaaaataaatatgaagaacaa 594
           || || | ||||||| || |  |||||||||  ||  ||||  ||  ||| |||   |||
Sbjct: 523 aaaaaatacaaaaagcaaatcaatgattattttgagcgaaagtatcgatacgaatttcaa 582

Query: 595 aaatcgattcttaaagatagaaatagtttttctaaaactgatcatgatgcaacttttatg 654
           ||||| ||| | || ||||||||||||| |||||| || ||| ||||||| || ||||||
Sbjct: 583 aaatctattttaaaggatagaaatagttattctaagacagattatgatgcgacatttatg 642

Query: 655 agaatgaaggaagaccatatgaaaaatggccaacttaagccaggatacaatttacaaata 714
           |||||||| ||||| || ||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 643 agaatgaaagaagatcacatgaaaaatggacaacttaagccagggtataatttacaaata 702

Query: 715 gcgacaaattctcaatttgttttatcctatgacctatttcaaaacccgacagatactaga 774
           || |||||||| |||||||||||||| ||| |  | | |||||| || || |||||||||
Sbjct: 703 gcaacaaattcccaatttgttttatcttataatgtgtatcaaaatccaacggatactaga 762

Query: 775 actttaattccatttttaacaatgattcaa 804
           ||  | |||||||||||||     ||||||
Sbjct: 763 acgatgattccatttttaa-----attcaa 787


 Score = 605 bits (1562), Expect = e-173
 Identities = 366/435 (84%)
 Strand = Plus / Plus

Query: 820  ttgtagctgatgcaggttatggtagtgagcaaaactatatggccattatagatgatttta 879
            ||||||||||||||||||||||||||||   ||| |||| ||| ||||||||||| ||||
Sbjct: 821  ttgtagctgatgcaggttatggtagtgaatcaaattataaggcaattatagatgacttta 880

Query: 880  ataaaacgccacttattacgtatggcatgtttattaaagataaaactagaaagtttaaaa 939
            ||  ||||||||| || || ||||| |||||||| ||||||||||||| ||| | |||||
Sbjct: 881  atcgaacgccactcataacatatggaatgtttataaaagataaaactaaaaaatataaaa 940

Query: 940  gtgacattttcgacactcaaaattggaaatatgacgaacttaatgatgaatttatatgtc 999
            ||||||| ||  | |||||||||||||| ||||||||| ||||||| ||||| || ||||
Sbjct: 941  gtgacatctttaatactcaaaattggaactatgacgaaattaatgacgaattcatttgtc 1000

Query: 1000 ctaataacaaaagaataggttttaaaagatatgcataccgtaatgatagatatggtttta 1059
            | ||||| ||| |  ||||||||||||||||||| || ||| ||||||  ||||||| ||
Sbjct: 1001 cgaataataaacggctaggttttaaaagatatgcctatcgtcatgataagtatggttata 1060

Query: 1060 aacgagacttcaaactatatgaatgcgatgactgttcagcatgttctttgaggcaacaat 1119
            | |||||||||||| |||||||||| ||||| ||||||| |||| || |||   | ||||
Sbjct: 1061 agcgagacttcaaattatatgaatgtgatgattgttcagaatgtcctctgaaaaatcaat 1120

Query: 1120 gcatgaaaccaaattcaaaatccaataagaaaatcatgaagaattataattgggaatact 1179
            | |||||    ||||||||| | || || ||||| |||||||||||||| |||||||| |
Sbjct: 1121 gtatgaacttcaattcaaaaacaaacaaaaaaataatgaagaattataactgggaatatt 1180

Query: 1180 ttaaagtccaaattaatcaaaagctttctgaaccagaaacgaaaaaaatctatagtcaaa 1239
            |||||  |||||||||  |||||||||| ||||||||||| ||||| ||||| |||||||
Sbjct: 1181 ttaaatcccaaattaacaaaaagctttcagaaccagaaacaaaaaatatctacagtcaaa 1240

Query: 1240 gaaaaattgatgtag 1254
            ||||||||||||| |
Sbjct: 1241 gaaaaattgatgtgg 1255


 Score = 261 bits (673), Expect = 9e-70
 Identities = 171/211 (81%)
 Strand = Plus / Plus

Query: 20  tatatgcatatactcaatctgtattttctggtcgaagaatagagaaattacttcatgaca 79
           ||||||| || || ||||||||||| || ||||| | |||||| ||| | ||| |||| |
Sbjct: 8   tatatgcctacacacaatctgtattctcaggtcgtaaaatagaaaaaatgcttaatgata 67

Query: 80  gtattcgaatgatgtggttagctcaaaatcaaacaccttcttataaaactattaatcgtt 139
           | || |||||||||||| || | |||||||||| ||||||||||||||| |||||||  |
Sbjct: 68  gcatccgaatgatgtggctatcacaaaatcaaaaaccttcttataaaacaattaatcaat 127

Query: 140 ttagagtgaatcctaatactgatgcgttaattgaatctttatttattcagttccatagtc 199
           ||||||| ||||| ||    ||||| ||| | ||||||||||||||||| ||  | ||||
Sbjct: 128 ttagagtaaatccaaaagtagatgctttattagaatctttatttattcaattttacagtc 187

Query: 200 aatgtttaaagcaaaatcttat---tgataa 227
           | ||| |||| |||||||||||   ||||||
Sbjct: 188 agtgtgtaaaacaaaatcttatagatgataa 218

15) SAOUHSC_01805 in NC_007795


>NC_007793_R1|9|G9|87160780|YP_492755.1|Staphylococcus_aureus_subsp._aureus_USA300_FPR3757|-|8270..9781|-|SAUSA300_0034|IS1272, 
          Length = 1512

 Score = 641 bits (1655), Expect = e-184
 Identities = 387/460 (84%)
 Strand = Plus / Plus

Query: 981  accttcggttatttaccagagtatattgtagctgatgcaggttatggtagtgagcaaaac 1040
            |||| |||| ||||||| || ||||||||||||||||||||||||||||||||   ||| 
Sbjct: 796  acctacggtcatttacctgaatatattgtagctgatgcaggttatggtagtgaatcaaat 855

Query: 1041 tatatggctattatagatgattttaataaaacgccacttattacgtatggcatgtttatt 1100
            |||| ||| ||||||||||| ||||||  ||||||||| || || ||||| |||||||| 
Sbjct: 856  tataaggcaattatagatgactttaatcgaacgccactcataacatatggaatgtttata 915

Query: 1101 aaagataaaactagaaagtttaaaagtggcattttcaacactcaaaattggaaatatgac 1160
            ||||||||||||| ||| | |||||||| ||| || || |||||||||||||| ||||||
Sbjct: 916  aaagataaaactaaaaaatataaaagtgacatctttaatactcaaaattggaactatgac 975

Query: 1161 gaacttaataatgaatttatatgtcctaataacaaaagaataggttttaaaagatatgca 1220
            ||| ||||| | ||||| || ||||| ||||| ||| |  ||||||||||||||||||| 
Sbjct: 976  gaaattaatgacgaattcatttgtccgaataataaacggctaggttttaaaagatatgcc 1035

Query: 1221 taccgtaatgatagatatggttttaaacgagacttcaaactatatgaatgtgatgactgt 1280
            || ||| ||||||  ||||||| ||| |||||||||||| |||||||||||||||| |||
Sbjct: 1036 tatcgtcatgataagtatggttataagcgagacttcaaattatatgaatgtgatgattgt 1095

Query: 1281 tcatcatgttctttgagacatcaatgcatgaaaccaaattcgaaatccaataagaaaatc 1340
            |||  |||| || ||| | ||||||| |||||    ||||| ||| | || || ||||| 
Sbjct: 1096 tcagaatgtcctctgaaaaatcaatgtatgaacttcaattcaaaaacaaacaaaaaaata 1155

Query: 1341 atgaagaattataattgggaatactttaaagtccaaattaatcaaaagctttctgaacca 1400
            |||||||||||||| |||||||| ||||||  |||||||||  |||||||||| ||||||
Sbjct: 1156 atgaagaattataactgggaatattttaaatcccaaattaacaaaaagctttcagaacca 1215

Query: 1401 gaaacgaaaaacatctatagtcaaagaaaaattgatgtag 1440
            ||||| ||||| ||||| |||||||||||||||||||| |
Sbjct: 1216 gaaacaaaaaatatctacagtcaaagaaaaattgatgtgg 1255


 Score = 438 bits (1129), Expect = e-123
 Identities = 306/396 (77%)
 Strand = Plus / Plus

Query: 403 atttttattgatggtacaaaagtagaagctaatgccaatagatatacatttgtgtggaag 462
           ||||||||||||||||||||| | ||||| ||||||||| ||||||||||||| ||||| 
Sbjct: 223 atttttattgatggtacaaaaattgaagcaaatgccaatcgatatacatttgtatggaaa 282

Query: 463 aaaagtattcaaaatcacgaatcgaaattgaacgaaaattcaaaaacattatatcgtgac 522
           || ||||||||||| || ||||| ||  |||| ||  |||| ||| |  | || | ||| 
Sbjct: 283 aagagtattcaaaaccatgaatcaaagatgaatgaggattctaaagccctctaccatgaa 342

Query: 523 ttagttgaagaaaaaataataccagagataaaagaagatggagatagcgatttaacaata 582
           || ||     | ||||| ||||| || || |||||||||   ||||  || ||||||| |
Sbjct: 343 ttggtaaccaataaaatcataccggaaattaaagaagatcatgataatgaattaacaaaa 402

Query: 583 gaagaaatagatttaattggtagtcatttagataaagaaatcgaagatttaaatcattct 642
           |||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||   |
Sbjct: 403 gaagaaatagatttgattggtagtcacttagataaagaaatcgaagatttaaaccaacat 462

Query: 643 attgagaacgaagattgtgctcaaattagaaaacagacccgtaaaaaaataactgagatt 702
           ||  | || ||| | ||| || |||  |||||||| |  |||   |||| |||| | || 
Sbjct: 463 atcaacaatgaaaaatgtactaaaacaagaaaacaaatacgtctcaaaagaactaaaatc 522

Query: 703 aagaagttcaaaaagaaatttgatgattattccgaaagaaaaaataaatatgaagaacaa 762
           || || | ||||||| || |  |||||||||  ||  ||||  ||  ||| |||   |||
Sbjct: 523 aaaaaatacaaaaagcaaatcaatgattattttgagcgaaagtatcgatacgaatttcaa 582

Query: 763 aaatcgattcttaaa-gatagaaatagtttttctaa 797
           ||||| ||| ||||| ||||||||||||| ||||||
Sbjct: 583 aaatctatt-ttaaaggatagaaatagttattctaa 617


 Score = 265 bits (685), Expect = 4e-71
 Identities = 172/211 (82%)
 Strand = Plus / Plus

Query: 188 tatatgcatatactcaatctgtattttctggtcgtagaatagaaaaattacttcatgaca 247
           ||||||| || || ||||||||||| || ||||||| |||||||||| | ||| |||| |
Sbjct: 8   tatatgcctacacacaatctgtattctcaggtcgtaaaatagaaaaaatgcttaatgata 67

Query: 248 gtattcgaatgatgtggttagctcaagatcaaacaccttcttataaaactattaatcgtt 307
           | || |||||||||||| || | ||| |||||| ||||||||||||||| |||||||  |
Sbjct: 68  gcatccgaatgatgtggctatcacaaaatcaaaaaccttcttataaaacaattaatcaat 127

Query: 308 ttagagtgaatcctaatactgatgcgttaattgaatctttatttattcagttccatagtc 367
           ||||||| ||||| ||    ||||| ||| | ||||||||||||||||| ||  | ||||
Sbjct: 128 ttagagtaaatccaaaagtagatgctttattagaatctttatttattcaattttacagtc 187

Query: 368 aatgtttaaagcaaaatcttat---tgataa 395
           | ||| |||| |||||||||||   ||||||
Sbjct: 188 agtgtgtaaaacaaaatcttatagatgataa 218


 Score = 234 bits (603), Expect = 1e-61
 Identities = 140/167 (84%)
 Strand = Plus / Plus

Query: 811 atgatgcaacttttatgagaatgaaggaagaccatatgaaaaatggccaacttaagccag 870
           ||||||| || |||||||||||||| ||||| || ||||||||||| |||||||||||||
Sbjct: 626 atgatgcgacatttatgagaatgaaagaagatcacatgaaaaatggacaacttaagccag 685

Query: 871 gatacaatttacaaatagcgacaaattctcaatttgttttatcctatgacctatttcaaa 930
           | || |||||||||||||| |||||||| |||||||||||||| ||| |  | | |||||
Sbjct: 686 ggtataatttacaaatagcaacaaattcccaatttgttttatcttataatgtgtatcaaa 745

Query: 931 acccaacagatactagaacattaatcccatttttaacaatgattcaa 977
           | ||||| |||||||||||  | || ||||||||||     ||||||
Sbjct: 746 atccaacggatactagaacgatgattccatttttaa-----attcaa 787