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Homologs of hsdR gene of NC_003923_R1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) hsdR
( NP_644848.1 )

hypothetical protein

NC_003923
(Staphylococcus aureus MW2)

1e-46

100

2) SAKOR_00041
( YP_008490225.1 )

Type I restriction-modification system restriction subunit

NC_022226
(Staphylococcus aureus CN1)

1e-42

100

3) hsdR1
( YP_001573957.1 )

type I site-specific deoxyribonuclease restriction subunit

NC_010079
(Staphylococcus aureus TCH1516)

1e-42

100

4) MS7_0035
( YP_005756502.1 )

hypothetical protein

NC_017351
(Staphylococcus aureus 11819-97)

1e-34

5) SACOL0035
( YP_184946.1 )

hypothetical protein

NC_002951
(Staphylococcus aureus COL)

1e-34

6) BN843_650
( YP_007867144.1 )

Type I restriction-modification system,restriction subunit R

NC_021059
(Staphylococcus aureus M1)

1e-34

7) hsdR
( YP_008586682.1 )

type I restriction-modification system endonuclease

NC_022443
(Staphylococcus aureus SA40)

1e-34

8) rplL
( YP_005746515.1 )

50S ribosomal protein L7/L12

NC_017342
(Staphylococcus aureus TCH60)

1e-34

9) SAMSHR1132_00340
( YP_005324558.1 )

hypothetical protein

NC_016941
(Staphylococcus aureus MSHR1132)

1e-31

100

10) C248_2172
( YP_006710869.1 )

Type I restriction modification system subunit

NC_018608
(Staphylococcus aureus 08BA02176)

2e-21

11) ST398NM01_2197
( YP_006196231.1 )

Type I restriction-modification system restriction subunit

NC_017673
(Staphylococcus aureus 71193)

2e-21

12) SAPIG2197
( YP_005734955.1 )

type I restriction-modification enzyme, R subunit

NC_017333
(Staphylococcus aureus ST398)

2e-21

13) SAMSHR1132_19760
( YP_005326478.1 )

hypothetical protein

NC_016941
(Staphylococcus aureus MSHR1132)

6e-21

• Sequence Alignments

1) hsdR in NC_003923


> NC_003923_R1|9|G9|21281762|NP_644848.1|Staphylococcus_aureus_subsp._aureus_MW2|+|8108..8437|hsdR|MW0033|hypothetical 
protein
Length=109

 Score =  179 bits (663),  Expect = 1e-46, Method: Compositional matrix adjust.
 Identities = 109/109 (100%), Positives = 109/109 (100%), Gaps = 0/109 (0%)

Query  1    MLSILHFMIQCLNLIETSVLLRILYVVYRASHETAKEALGDKELRAIAHELTKTVKDNMS  60
            MLSILHFMIQCLNLIETSVLLRILYVVYRASHETAKEALGDKELRAIAHELTKTVKDNMS
Sbjct  1    MLSILHFMIQCLNLIETSVLLRILYVVYRASHETAKEALGDKELRAIAHELTKTVKDNMS  60

Query  61   VDWSKRDSAKAKMRVQVRRLLKKYGYPPDLQKMAVEQVVEQAELMASQQ  109
            VDWSKRDSAKAKMRVQVRRLLKKYGYPPDLQKMAVEQVVEQAELMASQQ
Sbjct  61   VDWSKRDSAKAKMRVQVRRLLKKYGYPPDLQKMAVEQVVEQAELMASQQ  109

2) SAKOR_00041 in NC_022226


> NC_003923_R1|9|G9|21281762|NP_644848.1|Staphylococcus_aureus_subsp._aureus_MW2|+|8108..8437|hsdR|MW0033|hypothetical 
protein
Length=109

 Score =  166 bits (613),  Expect = 1e-42, Method: Compositional matrix adjust.
 Identities = 102/102 (100%), Positives = 102/102 (100%), Gaps = 0/102 (0%)

Query  1    MIQCLNLIETSVLLRILYVVYRASHETAKEALGDKELRAIAHELTKTVKDNMSVDWSKRD  60
            MIQCLNLIETSVLLRILYVVYRASHETAKEALGDKELRAIAHELTKTVKDNMSVDWSKRD
Sbjct  8    MIQCLNLIETSVLLRILYVVYRASHETAKEALGDKELRAIAHELTKTVKDNMSVDWSKRD  67

Query  61   SAKAKMRVQVRRLLKKYGYPPDLQKMAVEQVVEQAELMASQQ  102
            SAKAKMRVQVRRLLKKYGYPPDLQKMAVEQVVEQAELMASQQ
Sbjct  68   SAKAKMRVQVRRLLKKYGYPPDLQKMAVEQVVEQAELMASQQ  109

3) hsdR1 in NC_010079


> NC_003923_R1|9|G9|21281762|NP_644848.1|Staphylococcus_aureus_subsp._aureus_MW2|+|8108..8437|hsdR|MW0033|hypothetical 
protein
Length=109

 Score =  166 bits (613),  Expect = 1e-42, Method: Compositional matrix adjust.
 Identities = 102/102 (100%), Positives = 102/102 (100%), Gaps = 0/102 (0%)

Query  1    MIQCLNLIETSVLLRILYVVYRASHETAKEALGDKELRAIAHELTKTVKDNMSVDWSKRD  60
            MIQCLNLIETSVLLRILYVVYRASHETAKEALGDKELRAIAHELTKTVKDNMSVDWSKRD
Sbjct  8    MIQCLNLIETSVLLRILYVVYRASHETAKEALGDKELRAIAHELTKTVKDNMSVDWSKRD  67

Query  61   SAKAKMRVQVRRLLKKYGYPPDLQKMAVEQVVEQAELMASQQ  102
            SAKAKMRVQVRRLLKKYGYPPDLQKMAVEQVVEQAELMASQQ
Sbjct  68   SAKAKMRVQVRRLLKKYGYPPDLQKMAVEQVVEQAELMASQQ  109

4) MS7_0035 in NC_017351


> NC_003923_R1|9|G9|21281762|NP_644848.1|Staphylococcus_aureus_subsp._aureus_MW2|+|8108..8437|hsdR|MW0033|hypothetical 
protein
Length=109

 Score =  139 bits (512),  Expect = 1e-34, Method: Compositional matrix adjust.
 Identities = 85/86 (99%), Positives = 86/86 (100%), Gaps = 0/86 (0%)

Query  1    MYVVYRASHETAKEALGDKELRAIAHELTKTVKDNMSVDWSKRDSAKAKMRVQVRRLLKK  60
            +YVVYRASHETAKEALGDKELRAIAHELTKTVKDNMSVDWSKRDSAKAKMRVQVRRLLKK
Sbjct  24   LYVVYRASHETAKEALGDKELRAIAHELTKTVKDNMSVDWSKRDSAKAKMRVQVRRLLKK  83

Query  61   YGYPPDLQKMAVEQVVEQAELMASQQ  86
            YGYPPDLQKMAVEQVVEQAELMASQQ
Sbjct  84   YGYPPDLQKMAVEQVVEQAELMASQQ  109

5) SACOL0035 in NC_002951


> NC_003923_R1|9|G9|21281762|NP_644848.1|Staphylococcus_aureus_subsp._aureus_MW2|+|8108..8437|hsdR|MW0033|hypothetical 
protein
Length=109

 Score =  139 bits (512),  Expect = 1e-34, Method: Compositional matrix adjust.
 Identities = 85/86 (99%), Positives = 86/86 (100%), Gaps = 0/86 (0%)

Query  1    MYVVYRASHETAKEALGDKELRAIAHELTKTVKDNMSVDWSKRDSAKAKMRVQVRRLLKK  60
            +YVVYRASHETAKEALGDKELRAIAHELTKTVKDNMSVDWSKRDSAKAKMRVQVRRLLKK
Sbjct  24   LYVVYRASHETAKEALGDKELRAIAHELTKTVKDNMSVDWSKRDSAKAKMRVQVRRLLKK  83

Query  61   YGYPPDLQKMAVEQVVEQAELMASQQ  86
            YGYPPDLQKMAVEQVVEQAELMASQQ
Sbjct  84   YGYPPDLQKMAVEQVVEQAELMASQQ  109

6) BN843_650 in NC_021059


> NC_003923_R1|9|G9|21281762|NP_644848.1|Staphylococcus_aureus_subsp._aureus_MW2|+|8108..8437|hsdR|MW0033|hypothetical 
protein
Length=109

 Score =  139 bits (512),  Expect = 1e-34, Method: Compositional matrix adjust.
 Identities = 85/86 (99%), Positives = 86/86 (100%), Gaps = 0/86 (0%)

Query  1    MYVVYRASHETAKEALGDKELRAIAHELTKTVKDNMSVDWSKRDSAKAKMRVQVRRLLKK  60
            +YVVYRASHETAKEALGDKELRAIAHELTKTVKDNMSVDWSKRDSAKAKMRVQVRRLLKK
Sbjct  24   LYVVYRASHETAKEALGDKELRAIAHELTKTVKDNMSVDWSKRDSAKAKMRVQVRRLLKK  83

Query  61   YGYPPDLQKMAVEQVVEQAELMASQQ  86
            YGYPPDLQKMAVEQVVEQAELMASQQ
Sbjct  84   YGYPPDLQKMAVEQVVEQAELMASQQ  109

7) hsdR in NC_022443


> NC_003923_R1|9|G9|21281762|NP_644848.1|Staphylococcus_aureus_subsp._aureus_MW2|+|8108..8437|hsdR|MW0033|hypothetical 
protein
Length=109

 Score =  139 bits (512),  Expect = 1e-34, Method: Compositional matrix adjust.
 Identities = 85/86 (99%), Positives = 86/86 (100%), Gaps = 0/86 (0%)

Query  1    MYVVYRASHETAKEALGDKELRAIAHELTKTVKDNMSVDWSKRDSAKAKMRVQVRRLLKK  60
            +YVVYRASHETAKEALGDKELRAIAHELTKTVKDNMSVDWSKRDSAKAKMRVQVRRLLKK
Sbjct  24   LYVVYRASHETAKEALGDKELRAIAHELTKTVKDNMSVDWSKRDSAKAKMRVQVRRLLKK  83

Query  61   YGYPPDLQKMAVEQVVEQAELMASQQ  86
            YGYPPDLQKMAVEQVVEQAELMASQQ
Sbjct  84   YGYPPDLQKMAVEQVVEQAELMASQQ  109

8) rplL in NC_017342


> NC_003923_R1|9|G9|21281762|NP_644848.1|Staphylococcus_aureus_subsp._aureus_MW2|+|8108..8437|hsdR|MW0033|hypothetical 
protein
Length=109

 Score =  139 bits (512),  Expect = 1e-34, Method: Compositional matrix adjust.
 Identities = 85/86 (99%), Positives = 86/86 (100%), Gaps = 0/86 (0%)

Query  1    MYVVYRASHETAKEALGDKELRAIAHELTKTVKDNMSVDWSKRDSAKAKMRVQVRRLLKK  60
            +YVVYRASHETAKEALGDKELRAIAHELTKTVKDNMSVDWSKRDSAKAKMRVQVRRLLKK
Sbjct  24   LYVVYRASHETAKEALGDKELRAIAHELTKTVKDNMSVDWSKRDSAKAKMRVQVRRLLKK  83

Query  61   YGYPPDLQKMAVEQVVEQAELMASQQ  86
            YGYPPDLQKMAVEQVVEQAELMASQQ
Sbjct  84   YGYPPDLQKMAVEQVVEQAELMASQQ  109

9) SAMSHR1132_00340 in NC_016941


> NC_003923_R1|9|G9|21281762|NP_644848.1|Staphylococcus_aureus_subsp._aureus_MW2|+|8108..8437|hsdR|MW0033|hypothetical 
protein
Length=109

 Score =  129 bits (472),  Expect = 1e-31, Method: Compositional matrix adjust.
 Identities = 80/80 (100%), Positives = 80/80 (100%), Gaps = 0/80 (0%)

Query  1    ASHETAKEALGDKELRAIAHELTKTVKDNMSVDWSKRDSAKAKMRVQVRRLLKKYGYPPD  60
            ASHETAKEALGDKELRAIAHELTKTVKDNMSVDWSKRDSAKAKMRVQVRRLLKKYGYPPD
Sbjct  30   ASHETAKEALGDKELRAIAHELTKTVKDNMSVDWSKRDSAKAKMRVQVRRLLKKYGYPPD  89

Query  61   LQKMAVEQVVEQAELMASQQ  80
            LQKMAVEQVVEQAELMASQQ
Sbjct  90   LQKMAVEQVVEQAELMASQQ  109

10) C248_2172 in NC_018608


> NC_003923_R1|9|G9|21281762|NP_644848.1|Staphylococcus_aureus_subsp._aureus_MW2|+|8108..8437|hsdR|MW0033|hypothetical 
protein
Length=109

 Score = 96.0 bits (345),  Expect = 2e-21, Method: Compositional matrix adjust.
 Identities = 52/79 (66%), Positives = 67/79 (85%), Gaps = 0/79 (0%)

Query  17   ASHDTAEHVLGDDTLKIIAHELTQSIKENMSIDWNLCESARAKMRVIVRRLLKKYGYPPE  76
            ASH+TA + LGD  L+ IAHELT+++K+NMS+DW+  +SA+AKMRV VRRLLKKYGYPP+
Sbjct  30   ASHETAKEALGDKELRAIAHELTKTVKDNMSVDWSKRDSAKAKMRVQVRRLLKKYGYPPD  89

Query  77   ISKQAVETVIEQAELMSEQ  95
            + K AVE V+EQAELM+ Q
Sbjct  90   LQKMAVEQVVEQAELMASQ  108

11) ST398NM01_2197 in NC_017673


> NC_003923_R1|9|G9|21281762|NP_644848.1|Staphylococcus_aureus_subsp._aureus_MW2|+|8108..8437|hsdR|MW0033|hypothetical 
protein
Length=109

 Score = 96.0 bits (345),  Expect = 2e-21, Method: Compositional matrix adjust.
 Identities = 52/79 (66%), Positives = 67/79 (85%), Gaps = 0/79 (0%)

Query  17   ASHDTAEHVLGDDTLKIIAHELTQSIKENMSIDWNLCESARAKMRVIVRRLLKKYGYPPE  76
            ASH+TA + LGD  L+ IAHELT+++K+NMS+DW+  +SA+AKMRV VRRLLKKYGYPP+
Sbjct  30   ASHETAKEALGDKELRAIAHELTKTVKDNMSVDWSKRDSAKAKMRVQVRRLLKKYGYPPD  89

Query  77   ISKQAVETVIEQAELMSEQ  95
            + K AVE V+EQAELM+ Q
Sbjct  90   LQKMAVEQVVEQAELMASQ  108

12) SAPIG2197 in NC_017333


> NC_003923_R1|9|G9|21281762|NP_644848.1|Staphylococcus_aureus_subsp._aureus_MW2|+|8108..8437|hsdR|MW0033|hypothetical 
protein
Length=109

 Score = 96.0 bits (345),  Expect = 2e-21, Method: Compositional matrix adjust.
 Identities = 52/79 (66%), Positives = 67/79 (85%), Gaps = 0/79 (0%)

Query  17   ASHDTAEHVLGDDTLKIIAHELTQSIKENMSIDWNLCESARAKMRVIVRRLLKKYGYPPE  76
            ASH+TA + LGD  L+ IAHELT+++K+NMS+DW+  +SA+AKMRV VRRLLKKYGYPP+
Sbjct  30   ASHETAKEALGDKELRAIAHELTKTVKDNMSVDWSKRDSAKAKMRVQVRRLLKKYGYPPD  89

Query  77   ISKQAVETVIEQAELMSEQ  95
            + K AVE V+EQAELM+ Q
Sbjct  90   LQKMAVEQVVEQAELMASQ  108

13) SAMSHR1132_19760 in NC_016941


> NC_003923_R1|9|G9|21281762|NP_644848.1|Staphylococcus_aureus_subsp._aureus_MW2|+|8108..8437|hsdR|MW0033|hypothetical 
protein
Length=109

 Score = 93.9 bits (337),  Expect = 6e-21, Method: Compositional matrix adjust.
 Identities = 51/79 (65%), Positives = 66/79 (84%), Gaps = 0/79 (0%)

Query  13   ASHDTAEQVLGDDTSKIIAHELTQSIKENMSIDWNLCESARAKMRVIVRRLLKKYGYPPE  72
            ASH+TA + LGD   + IAHELT+++K+NMS+DW+  +SA+AKMRV VRRLLKKYGYPP+
Sbjct  30   ASHETAKEALGDKELRAIAHELTKTVKDNMSVDWSKRDSAKAKMRVQVRRLLKKYGYPPD  89

Query  73   ISKQAVETVIEQAELMSEQ  91
            + K AVE V+EQAELM+ Q
Sbjct  90   LQKMAVEQVVEQAELMASQ  108