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Homologs of hrpL gene of AF232004

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) hrpL
( NP_791231.1 )

RNA polymerase sigma factor HrpL

NC_004578
(Pseudomonas syringae DC3000)

2e-84

2) hrpL
( YP_273553.1 )

RNA polymerase sigma factor HrpL

NC_005773
(Pseudomonas syringae 1448A)

5e-79

3) Psyr_1217
( YP_234309.1 )

sigma-70 region 2:sigma-70 region 4

NC_007005
(Pseudomonas syringae B728a)

3e-78

4) rspL
( YP_002870376.1 )

sigma factor

NC_012660
(Pseudomonas fluorescens SBW25)

4e-33

5) H045_00150
( YP_007395602.1 )

sigma factor

NC_020209
(Pseudomonas poae RE*1-1-14)

5e-33

6) rspL
( YP_006322223.1 )

RNA polymerase sigma factor RspL

NC_017911
(Pseudomonas fluorescens A506)

3e-32

7) PSEBR_a5390
( YP_004356901.1 )

RNA polymerase sigma factor

NC_015379
(Pseudomonas brassicacearum NFM421)

3e-31

8) hrpL
( YP_005210977.1 )

protein HrpL

NC_016830
(Pseudomonas fluorescens F113)

5e-29

9) Marme_1067
( YP_004312178.1 )

ECF subfamily RNA polymerase sigma-24 subunit

NC_015276
(Marinomonas mediterranea MMB-1)

1e-27

10) hrpL
( YP_050182.1 )

sigma factor

NC_004547
(Pectobacterium atrosepticum SCRI1043)

4e-25

11) H650_14875
( YP_008108775.1 )

hypothetical protein

NC_021500
(Enterobacter sp. R4-368)

4e-25

12) PC1_2204
( YP_003017779.1 )

ECF subfamily RNA polymerase sigma-24 subunit

NC_012917
(Pectobacterium carotovorum PC1)

2e-24

13) PCC21_022820
( YP_006646938.1 )

sigma factor

NC_018525
(Pectobacterium carotovorum PCC21)

2e-24

14) D781_3946
( YP_007346321.1 )

RNA polymerase sigma factor, sigma-70 family

NC_020064
(Serratia marcescens FGI94)

3e-24

15) hrpL
( YP_005804083.1 )

RNA polymerase sigma factor HrpL

NC_017390
(Erwinia pyrifoliae DSM 12163)

7e-24

16) hrpL
( YP_002650066.1 )

hrp/hrc type III secretion system-Hrp/hrc secretion/translocation pathway-sigma factor

NC_012214
(Erwinia pyrifoliae Ep1/96)

7e-24

17) hrpL
( YP_005818263.1 )

hrp/hrc Type III secretion system-Hrp/hrc secretion/translocation pathway-sigma factor

NC_017445
(Erwinia sp. Ejp617)

7e-24

18) hrpL
( YP_003539960.1 )

sigma factor HrpL

NC_013971
(Erwinia amylovora ATCC 49946)

8e-24

19) hrpL
( YP_003529894.1 )

RNA polymerase sigma factor HrpL

NC_013961
(Erwinia amylovora CFBP1430)

8e-24

20) hrpL
( YP_003883238.1 )

RNA polymerase sigma-54 factor rpoN

NC_014500
(Dickeya dadantii 3937)

1e-23

21) Dd586_1890
( YP_003333454.1 )

ECF subfamily RNA polymerase sigma-24 subunit

NC_013592
(Dickeya dadantii Ech586)

3e-23

22) Ser39006_2911
( YP_008523293.1 )

RNA polymerase, sigma-24 subunit, ECF subfamily

NC_022268
(Serratia sp. ATCC 39006)

9e-23

23) Dd1591_1893
( YP_003004222.1 )

RNA polymerase, sigma-24 subunit, ECF subfamily

NC_012912
(Dickeya zeae Ech1591)

1e-20

24) hrpL
( YP_001906471.1 )

Sigma factor HrpL (hrp cluster)

NC_010694
(Erwinia tasmaniensis Et1/99)

1e-18

• Sequence Alignments

1) hrpL in NC_004578


> AF232004|9|G8|13325078|AAG33875.2|Pseudomonas_syringae_pv._tomato_DC3000|-|10560..11114|hrpL|-|HrpL
Length=184

 Score =  304 bits (1139),  Expect = 2e-84, Method: Compositional matrix adjust.
 Identities = 183/184 (99%), Positives = 183/184 (99%), Gaps = 0/184 (0%)

Query  1    MFQKIVILDSTQPRQPSSSAGIRQMTADQIQMLRAFIQKRVMNPDDVDDILQCVFLEALR  60
            MFQKIVILDSTQPRQPSSSAGIRQMTADQIQMLRAFIQKRVMNPDDVDDILQCVFLEALR
Sbjct  1    MFQKIVILDSTQPRQPSSSAGIRQMTADQIQMLRAFIQKRVMNPDDVDDILQCVFLEALR  60

Query  61   NEHKFQHASKPQTWLCGIALNLIRNHFRKMYRQPYQESWEDEVHSELEGHGDVSHQVEGH  120
            NEHKFQHASKPQTWLCGIALNLIRNHFRKMYRQPYQESWEDEVHSELEGHGDVSHQVEGH
Sbjct  61   NEHKFQHASKPQTWLCGIALNLIRNHFRKMYRQPYQESWEDEVHSELEGHGDVSHQVEGH  120

Query  121  RQLARVIQAIDCLPSNMQKVLEVSLEMDGNYQETANSLGVPIGTVRSRLSRARVQLKQQI  180
            RQLARVIQAIDCLPSNMQKVLEVSLEMDGNYQETANSLGVPIGTVRSRLS ARVQLKQQI
Sbjct  121  RQLARVIQAIDCLPSNMQKVLEVSLEMDGNYQETANSLGVPIGTVRSRLSGARVQLKQQI  180

Query  181  DPFA  184
            DPFA
Sbjct  181  DPFA  184

2) hrpL in NC_005773


> AF232004|9|G8|13325078|AAG33875.2|Pseudomonas_syringae_pv._tomato_DC3000|-|10560..11114|hrpL|-|HrpL
Length=184

 Score =  286 bits (1071),  Expect = 5e-79, Method: Compositional matrix adjust.
 Identities = 167/184 (91%), Positives = 178/184 (97%), Gaps = 0/184 (0%)

Query  1    MFPNLVILDAPQPRQDSSSAGIRQLTADQIQMLRAFIQKRVMNPDDVDDILQCVFLEALR  60
            MF ++VILD+ QPRQ SSSAGIRQ+TADQIQMLRAFIQKRVMNPDDVDDILQCVFLEALR
Sbjct  1    MFQKIVILDSTQPRQPSSSAGIRQMTADQIQMLRAFIQKRVMNPDDVDDILQCVFLEALR  60

Query  61   NEHKFQHASKPQTWLCGIALNLIRNHFRKMYRQPYQESWEDDVHSELEWNGDITHQVDGH  120
            NEHKFQHASKPQTWLCGIALNLIRNHFRKMYRQPYQESWED+VHSELE +GD++HQV+GH
Sbjct  61   NEHKFQHASKPQTWLCGIALNLIRNHFRKMYRQPYQESWEDEVHSELEGHGDVSHQVEGH  120

Query  121  RQLARVIAAIDCLPSNMQKVLEVSLEMDGNYQDTANTLGVPIGTVRSRLSRARVQLKQQI  180
            RQLARVI AIDCLPSNMQKVLEVSLEMDGNYQ+TAN+LGVPIGTVRSRLS ARVQLKQQI
Sbjct  121  RQLARVIQAIDCLPSNMQKVLEVSLEMDGNYQETANSLGVPIGTVRSRLSGARVQLKQQI  180

Query  181  DPFA  184
            DPFA
Sbjct  181  DPFA  184

3) Psyr_1217 in NC_007005


> AF232004|9|G8|13325078|AAG33875.2|Pseudomonas_syringae_pv._tomato_DC3000|-|10560..11114|hrpL|-|HrpL
Length=184

 Score =  283 bits (1061),  Expect = 3e-78, Method: Compositional matrix adjust.
 Identities = 162/184 (89%), Positives = 180/184 (98%), Gaps = 0/184 (0%)

Query  1    MLPNLVILDATEPRQPSSSAGIRQLTADQVQMLRAFIQKRVKNADDVDDILQCVFLEALR  60
            M+ ++VILD+T+PRQPSSSAGIRQ+TADQ+QMLRAFIQKRV N+DDVDDILQCVFLEALR
Sbjct  1    MFQKIVILDSTQPRQPSSSAGIRQMTADQIQMLRAFIQKRVMNPDDVDDILQCVFLEALR  60

Query  61   NEHKFQHASKPQTWLCGIALNLIRNHFRKMYRQPYQESWEDEVHTDLEWNGDITHQVDGH  120
            NEHKFQHASKPQTWLCGIALNLIRNHFRKMYRQPYQESWEDEVH++LE +GD++HQV+GH
Sbjct  61   NEHKFQHASKPQTWLCGIALNLIRNHFRKMYRQPYQESWEDEVHSELEGHGDVSHQVEGH  120

Query  121  RQLARVIEAIDCLPTNMQKVLEVSLEMDGNYQETANTLGVPIGTVRSRLSRARVQLKQHI  180
            RQLARVI+AIDCLP+NMQKVLEVSLEMDGNYQETAN+LGVPIGTVRSRLS ARVQLKQ+I
Sbjct  121  RQLARVIQAIDCLPSNMQKVLEVSLEMDGNYQETANSLGVPIGTVRSRLSGARVQLKQQI  180

Query  181  DPFA  184
            DPFA
Sbjct  181  DPFA  184

4) rspL in NC_012660


> AF232004|9|G8|13325078|AAG33875.2|Pseudomonas_syringae_pv._tomato_DC3000|-|10560..11114|hrpL|-|HrpL
Length=184

 Score =  134 bits (490),  Expect = 4e-33, Method: Compositional matrix adjust.
 Identities = 76/160 (48%), Positives = 116/160 (73%), Gaps = 0/160 (0%)

Query  19   MHHLTDDQQKKLRRFIHKRVLNPEDADDLLQLTYLEAWRNRERFSGNATLSTWMCGIAQN  78
            ++++T DQ + LR FI+KRV+NP+D DD+LQ  +LEA RN ++F   +   TW+CGIA N
Sbjct  22   IRQMTADQIQMLRAFIQKRVMNPDDVDDILQCVFLEALRNEHKFQHASKPQTWLCGIALN  81

Query  79   LIRNHFRRLYAKPVHCEFDESLWHGQEDNHNLDWEFEINRRLEKTLSAIDHLPIEMRKTL  138
            LIRNHFR++Y +P +   ++ +    E++ ++  + E +R+L + + AID LP +M+K L
Sbjct  82   LIRNHFRKMYRQPYQESWEDEVHSELEGHGDVSHQVEGHRQLARVIQAIDCLPSNMQKVL  141

Query  139  YASLETDGSYQDTADALDIPIGTVRSRLSRAREQLKRATQ  178
              SLE DG+YQ+TA++L++PIGTVRSRLS AR QLK+  +
Sbjct  142  EVSLEMDGNYQETANSLGVPIGTVRSRLSGARVQLKQQID  181

5) H045_00150 in NC_020209


> AF232004|9|G8|13325078|AAG33875.2|Pseudomonas_syringae_pv._tomato_DC3000|-|10560..11114|hrpL|-|HrpL
Length=184

 Score =  133 bits (489),  Expect = 5e-33, Method: Compositional matrix adjust.
 Identities = 78/155 (51%), Positives = 112/155 (73%), Gaps = 0/155 (0%)

Query  21   QLTDDQQKKLRRFIHKRVLNPEDADDILQLTYLEAWRNRERFSGQASLSTWMCGIAQNLV  80
            Q+T DQ + LR FI+KRV+NP+D DDILQ  +LEA RN ++F   +   TW+CGIA NL+
Sbjct  24   QMTADQIQMLRAFIQKRVMNPDDVDDILQCVFLEALRNEHKFQHASKPQTWLCGIALNLI  83

Query  81   RNHFRRLYAKPVHCEFDESLWHGQEENKNLDWEFEINRRLEKTLSAIDHLPAEMRKTLYA  140
            RNHFR++Y +P +   ++ +    E + ++  + E +R+L + + AID LP++M+K L  
Sbjct  84   RNHFRKMYRQPYQESWEDEVHSELEGHGDVSHQVEGHRQLARVIQAIDCLPSNMQKVLEV  143

Query  141  SLETDGSYQDTANVLDIPIGTVRSRLSRAREQLKR  175
            SLE DG+YQ+TAN L++PIGTVRSRLS AR QLK+
Sbjct  144  SLEMDGNYQETANSLGVPIGTVRSRLSGARVQLKQ  178

6) rspL in NC_017911


> AF232004|9|G8|13325078|AAG33875.2|Pseudomonas_syringae_pv._tomato_DC3000|-|10560..11114|hrpL|-|HrpL
Length=184

 Score =  131 bits (479),  Expect = 3e-32, Method: Compositional matrix adjust.
 Identities = 75/155 (49%), Positives = 111/155 (72%), Gaps = 0/155 (0%)

Query  21   HLTDDQQKKLRRFIHKRVLNPEDADDLLQLTYLEAWRNRERFSGTATLSTWMCGIAQNLI  80
            ++T DQ + LR FI+KRV+NP+D DD+LQ  +LEA RN ++F  ++   TW+CGIA NLI
Sbjct  24   QMTADQIQMLRAFIQKRVMNPDDVDDILQCVFLEALRNEHKFQHASKPQTWLCGIALNLI  83

Query  81   RNHFRRLYAKPSHCEFDESLWHGHEENHSLDWEFEVNRRLENTLSAIDHLPTEMRRTLYA  140
            RNHFR++Y +P +   ++ +    E +  +  + E +R+L   + AID LP++M++ L  
Sbjct  84   RNHFRKMYRQPYQESWEDEVHSELEGHGDVSHQVEGHRQLARVIQAIDCLPSNMQKVLEV  143

Query  141  SLETDGSYQDTADVLDIPIGTVRSRLSRAREQLKR  175
            SLE DG+YQ+TA+ L++PIGTVRSRLS AR QLK+
Sbjct  144  SLEMDGNYQETANSLGVPIGTVRSRLSGARVQLKQ  178

7) PSEBR_a5390 in NC_015379


> AF232004|9|G8|13325078|AAG33875.2|Pseudomonas_syringae_pv._tomato_DC3000|-|10560..11114|hrpL|-|HrpL
Length=184

 Score =  128 bits (467),  Expect = 3e-31, Method: Compositional matrix adjust.
 Identities = 73/170 (43%), Positives = 120/170 (71%), Gaps = 0/170 (0%)

Query  22   APPQTSPAPTGAPGICFGEERKLRLFVQKRVLNQDDADDIIQLTYLEAWRNQQKFRGLAK  81
            + P+ +++++G   +  ++ + LR F+QKRV+N DD DDI+Q  +LEA RN++KF+  +K
Sbjct  11   TQPRQPSSSAGIRQMTADQIQMLRAFIQKRVMNPDDVDDILQCVFLEALRNEHKFQHASK  70

Query  82   QDTWLCGIALNLIRNHFRRFYAQPPLTTFDESEFHESSDDIDLSELCDNRRLLDRTLLAM  141
             +TWLCGIALNLIRNHFR+ Y QP   + ++    E  ++ D+S+  + +R L R + A+
Sbjct  71   PQTWLCGIALNLIRNHFRKMYRQPYQESWEDEVHSELEGHGDVSHQVEGHRQLARVIQAI  130

Query  142  DALSKDMRDTLWTAVDTESSYRDAAERLGVPIGTVRSRLFRAREQLKRSV  191
            D L+ +M+  L  +++ +++Y+++A+ LGVPIGTVRSRL  AR QLK+ +
Sbjct  131  DCLPSNMQKVLEVSLEMDGNYQETANSLGVPIGTVRSRLSGARVQLKQQI  180

8) hrpL in NC_016830


> AF232004|9|G8|13325078|AAG33875.2|Pseudomonas_syringae_pv._tomato_DC3000|-|10560..11114|hrpL|-|HrpL
Length=184

 Score =  120 bits (438),  Expect = 5e-29, Method: Compositional matrix adjust.
 Identities = 77/175 (44%), Positives = 124/175 (71%), Gaps = 3/175 (1%)

Query  6    LMLPPQTSQAPTGAPGI---CFGEERKLRLFVQKRVLNQDDADDIIQLTYLEAWRNQQKF  62
            ++L +  ++ P++++GI     ++ + LR F+QKRV+N DD DDI+Q  +LEA RN++KF
Sbjct  6    VILDSTQPRQPSSSAGIRQMTADQIQMLRAFIQKRVMNPDDVDDILQCVFLEALRNEHKF  65

Query  63   KGLAKQDTWLCGIALNLIRNHFRRFYAQPPlstfdesefsessddidlselCDNRRLLDR  122
            +  +K +TWLCGIALNLIRNHFR+ Y QP   + ++   SE  ++ D+S+  + +R L R
Sbjct  66   QHASKPQTWLCGIALNLIRNHFRKMYRQPYQESWEDEVHSELEGHGDVSHQVEGHRQLAR  125

Query  123  TLSAMDALPKDMRDTLWTAVDTESSYRDAAERLGVPIGTVRSRLFRAREQLKRSV  177
             + A+D LP +M+  L  +++ +++Y+++A+ LGVPIGTVRSRL  AR QLK+ +
Sbjct  126  VIQAIDCLPSNMQKVLEVSLEMDGNYQETANSLGVPIGTVRSRLSGARVQLKQQI  180

9) Marme_1067 in NC_015276


> AF232004|9|G8|13325078|AAG33875.2|Pseudomonas_syringae_pv._tomato_DC3000|-|10560..11114|hrpL|-|HrpL
Length=184

 Score =  115 bits (420),  Expect = 1e-27, Method: Compositional matrix adjust.
 Identities = 70/173 (41%), Positives = 118/173 (69%), Gaps = 2/173 (1%)

Query  4    LNSFEKNNQNNKIDIAHLHSNQNEKLRRFISKKIWHKEDAEEVLQFTYLEAIRCQHKFIG  63
            L+S +  + ++  +I ++ ++Q + LR FI K++ + +D +++LQ  +LEA+R +HKF  
Sbjct  8    LDSTQPRQPSSSAGIRQMTADQIQMLRAFIQKRVMNPDDVDDILQCVFLEALRNEHKFQH  67

Query  64   DSKPETWLFGIAANLTKNYFKRYYNAPELEEMTESLIMDLESEIEADPAMLVEHENLLTK  123
             SKP+TWL GIA NL +N F++ Y  P  E   + +  +LE+  ++D +  VE +  L++
Sbjct  68   ASKPQTWLCGIALNLIRNHFRKMYRQPYQESWEDEVHSELEG--HGDVSHQVEGHRQLAR  125

Query  124  TVDAMSQLPSDTQSILDMVIEKDFSYQEAADSIGVPIGTIRSRLSRARQLLKQ  176
             ++A+  LPS+ Q +L++ +E D +YQE+A+S+GVPIGT+RSRLS AR  LKQ
Sbjct  126  VIQAIDCLPSNMQKVLEVSLEMDGNYQETANSLGVPIGTVRSRLSGARVQLKQ  178

10) hrpL in NC_004547


> AF232004|9|G8|13325078|AAG33875.2|Pseudomonas_syringae_pv._tomato_DC3000|-|10560..11114|hrpL|-|HrpL
Length=184

 Score =  107 bits (388),  Expect = 4e-25, Method: Compositional matrix adjust.
 Identities = 67/150 (45%), Positives = 105/150 (70%), Gaps = 2/150 (1%)

Query  33   LHNFIRKRVSNHDDVEDLQQMTYLEVLKHQDKFAGASRPETWVFGIALNLVRNYFKQA-R  91
            L+ FI+KRV N DDV+D+ Q  +LE L++++KF  AS+P+TW+ GIALNL+RN F++  R
Sbjct  33   LRAFIQKRVMNPDDVDDILQCVFLEALRNEHKFQHASKPQTWLCGIALNLIRNHFRKMYR  92

Query  92   QRAQEM-GDEMLEHIAIELDPGAITESQRALKRAMDAIVSLPEDTRQMLMQLLDTDASYQ  150
            Q  QE   DE+  ++  + D +   E++R L R ++AI  LP + +++L   L+ D++YQ
Sbjct  93   QPYQESWEDEVHSELEGHGDVSHQVEGHRQLARVIQAIDCLPSNMQKVLEVSLEMDGNYQ  152

Query  151  DLALQLGIPIGTVRSRLSRARGVIRQAVES  180
            + A  LG+PIGTVRSRLS AR  ++Q +++
Sbjct  153  ETANSLGVPIGTVRSRLSGARVQLKQQIDP  182

11) H650_14875 in NC_021500


> AF232004|9|G8|13325078|AAG33875.2|Pseudomonas_syringae_pv._tomato_DC3000|-|10560..11114|hrpL|-|HrpL
Length=184

 Score =  107 bits (388),  Expect = 4e-25, Method: Compositional matrix adjust.
 Identities = 67/160 (42%), Positives = 109/160 (69%), Gaps = 2/160 (1%)

Query  19   DIDELVANTTTRLRKFISRRVYNQSDVDDLVQMTYLEAFRNQHKFIGASSKETWLFGIAS  78
            +I ++ A+    LR FI +RV N  DVDD++Q  +LEA+RN+HKF  AS  +TWL GIA 
Sbjct  21   GIRQMTADQIQMLRAFIQKRVMNPDDVDDILQCVFLEALRNEHKFQHASKPQTWLCGIAL  80

Query  79   NLVRNHFKKTFNKPEMVAL-DDVNFLISDQIFNPDYINEHKIQLSETIAMVDKLPLKMQN  137
            NL+RNHF+K + +P   +  D+V+  + ++   ++ ++ H+ QL+  I  +D LP +MQ+
Sbjct  81   NLIRNHFRKMYRQPYQESWEDEVHSELEGHGDVSHQVEGHR-QLARVIQAIDCLPSNMQK  139

Query  138  VIYHIMDSDTSYNDAAEQLGIPIGTIRSRLSRVRKILKNN  177
            V+   ++ D +Y+++A+ LG+PIGT+RSRLS  R  LK++
Sbjct  140  VLEVSLEMDGNYQETANSLGVPIGTVRSRLSGARVQLKQQ  179

12) PC1_2204 in NC_012917


> AF232004|9|G8|13325078|AAG33875.2|Pseudomonas_syringae_pv._tomato_DC3000|-|10560..11114|hrpL|-|HrpL
Length=184

 Score =  105 bits (380),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 66/150 (44%), Positives = 104/150 (70%), Gaps = 2/150 (1%)

Query  34   LHNFIRKRVSNHDDVEDLQQMTYLEVLKHQDKFAGASRPETWVFGIALNLVRNYFKQA-R  92
            L+ FI+KRV N DDV+D+ Q  +LE L++++KF  AS+P+TW+ GIALNL+RN F++  R
Sbjct  33   LRAFIQKRVMNPDDVDDILQCVFLEALRNEHKFQHASKPQTWLCGIALNLIRNHFRKMYR  92

Query  93   QRAQEM-GDEMLEHIAIDLDPGAIAESQRALKRAMDAIVSLPEDTRQMLMQLLDTDASYQ  151
            Q  QE   DE+  ++  + D +   E++R L R ++AI  LP + +++L   L+ D++YQ
Sbjct  93   QPYQESWEDEVHSELEGHGDVSHQVEGHRQLARVIQAIDCLPSNMQKVLEVSLEMDGNYQ  152

Query  152  DLALQLEIPIGTVRSRLSRARGVIRQAVES  181
            + A  L +PIGTVRSRLS AR  ++Q +++
Sbjct  153  ETANSLGVPIGTVRSRLSGARVQLKQQIDP  182

13) PCC21_022820 in NC_018525


> AF232004|9|G8|13325078|AAG33875.2|Pseudomonas_syringae_pv._tomato_DC3000|-|10560..11114|hrpL|-|HrpL
Length=184

 Score =  105 bits (380),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 66/150 (44%), Positives = 104/150 (70%), Gaps = 2/150 (1%)

Query  34   LHNFIRKRVSNHDDVEDLQQMTYLEVLKHQDKFAGASRPETWVFGIALNLVRNYFKQA-R  92
            L+ FI+KRV N DDV+D+ Q  +LE L++++KF  AS+P+TW+ GIALNL+RN F++  R
Sbjct  33   LRAFIQKRVMNPDDVDDILQCVFLEALRNEHKFQHASKPQTWLCGIALNLIRNHFRKMYR  92

Query  93   QRAQEM-GDEMLEHIAIELDPGAITESQRSLKRAMDAIVSLPEDTRQMLMQLLDTDASYQ  151
            Q  QE   DE+  ++  + D +   E++R L R ++AI  LP + +++L   L+ D++YQ
Sbjct  93   QPYQESWEDEVHSELEGHGDVSHQVEGHRQLARVIQAIDCLPSNMQKVLEVSLEMDGNYQ  152

Query  152  DLALQLEIPIGTVRSRLSRARGVIRQAVES  181
            + A  L +PIGTVRSRLS AR  ++Q +++
Sbjct  153  ETANSLGVPIGTVRSRLSGARVQLKQQIDP  182

14) D781_3946 in NC_020064


> AF232004|9|G8|13325078|AAG33875.2|Pseudomonas_syringae_pv._tomato_DC3000|-|10560..11114|hrpL|-|HrpL
Length=184

 Score =  104 bits (379),  Expect = 3e-24, Method: Compositional matrix adjust.
 Identities = 68/151 (46%), Positives = 103/151 (69%), Gaps = 2/151 (1%)

Query  30   KKLINFIRRRVASTEDVEDIAQMTCLEVLRNRHKFTGASLPETWMFGIAINLIRNHYKRQ  89
            + L  FI++RV + +DV+DI Q   LE LRN HKF  AS P+TW+ GIA+NLIRNH+++ 
Sbjct  31   QMLRAFIQKRVMNPDDVDDILQCVFLEALRNEHKFQHASKPQTWLCGIALNLIRNHFRKM  90

Query  90   -QHRYLFDTLNDEVLENLLHDDDPSALTEHQRLLTTALTSIDRLPEEIKHMLTILIGDDG  148
             ++ Y  ++ +DEV  +L  ++D S   E +R L+  + +ID LP +++ +L + +  DG
Sbjct  91   YRQPYQ-ESWEDEVHSELEGHGDVSHQVEGHRQLARVIQAIDCLPSNMQKVLEVSLEMDG  149

Query  149  SYQDIAQQLNIPIGTVRSRLSRARETLKSQV  179
            +YQ+ A+ L +PIGTVRSRLS AR  LK Q+
Sbjct  150  NYQETANSLGVPIGTVRSRLSGARVQLKQQI  180

15) hrpL in NC_017445


> AF232004|9|G8|13325078|AAG33875.2|Pseudomonas_syringae_pv._tomato_DC3000|-|10560..11114|hrpL|-|HrpL
Length=184

 Score =  103 bits (373),  Expect = 7e-24, Method: Compositional matrix adjust.
 Identities = 66/153 (44%), Positives = 103/153 (68%), Gaps = 2/153 (1%)

Query  30   EHGRRVHHFIRKRVSHREDAEDLEQMTWLEVLRNRDKFAGASRPETWVFGIALNLVRNHF  89
            ++ + ++ FI+KRV + +D +D+ Q   LE LRN +KF  AS+P+TW+ GIALNL+RNHF
Sbjct  28   DQIQMLRAFIQKRVMNPDDVDDILQCVFLEALRNEHKFQHASKPQTWLCGIALNLIRNHF  87

Query  90   RLQSGRPRCDELDDDI--ILTQGDDPSHITEYQRLLNSTLNSIAVLPEDARRLMNMLVEK  147
            R    +P  +  +D++   L   +D SH  E +R L   +++I  LP + ++++++ +E 
Sbjct  88   RKMYRQPYQESWEDEVHSELEGHGDVSHQVEGHRQLARVIQAIDCLPSNMQKVLEVSLEM  147

Query  148  DGSYQDIAAHLNIPIGTVRSRLSRARVTLKQSV  180
            DG+YQ+ A  L +PIGTVRSRLS ARV LKQ +
Sbjct  148  DGNYQETANSLGVPIGTVRSRLSGARVQLKQQI  180

16) hrpL in NC_017390


> AF232004|9|G8|13325078|AAG33875.2|Pseudomonas_syringae_pv._tomato_DC3000|-|10560..11114|hrpL|-|HrpL
Length=184

 Score =  103 bits (373),  Expect = 7e-24, Method: Compositional matrix adjust.
 Identities = 66/153 (44%), Positives = 103/153 (68%), Gaps = 2/153 (1%)

Query  30   EHGRRVHHFIRKRVSHREDAEDLEQMTWLEVLRNRDKFAGASRPETWVFGIALNLVRNHF  89
            ++ + ++ FI+KRV + +D +D+ Q   LE LRN +KF  AS+P+TW+ GIALNL+RNHF
Sbjct  28   DQIQMLRAFIQKRVMNPDDVDDILQCVFLEALRNEHKFQHASKPQTWLCGIALNLIRNHF  87

Query  90   RLQSGRPRCDELDDDI--ILTQGDDPSHITEYQRLLNSTLNSIAVLPEDARRLMNMLVEK  147
            R    +P  +  +D++   L   +D SH  E +R L   +++I  LP + ++++++ +E 
Sbjct  88   RKMYRQPYQESWEDEVHSELEGHGDVSHQVEGHRQLARVIQAIDCLPSNMQKVLEVSLEM  147

Query  148  DGSYQDIAAHLNIPIGTVRSRLSRARVTLKQSV  180
            DG+YQ+ A  L +PIGTVRSRLS ARV LKQ +
Sbjct  148  DGNYQETANSLGVPIGTVRSRLSGARVQLKQQI  180

17) hrpL in NC_012214


> AF232004|9|G8|13325078|AAG33875.2|Pseudomonas_syringae_pv._tomato_DC3000|-|10560..11114|hrpL|-|HrpL
Length=184

 Score =  103 bits (373),  Expect = 7e-24, Method: Compositional matrix adjust.
 Identities = 66/153 (44%), Positives = 103/153 (68%), Gaps = 2/153 (1%)

Query  30   EHGRRVHHFIRKRVSHREDAEDLEQMTWLEVLRNRDKFAGASRPETWVFGIALNLVRNHF  89
            ++ + ++ FI+KRV + +D +D+ Q   LE LRN +KF  AS+P+TW+ GIALNL+RNHF
Sbjct  28   DQIQMLRAFIQKRVMNPDDVDDILQCVFLEALRNEHKFQHASKPQTWLCGIALNLIRNHF  87

Query  90   RLQSGRPRCDELDDDI--ILTQGDDPSHITEYQRLLNSTLNSIAVLPEDARRLMNMLVEK  147
            R    +P  +  +D++   L   +D SH  E +R L   +++I  LP + ++++++ +E 
Sbjct  88   RKMYRQPYQESWEDEVHSELEGHGDVSHQVEGHRQLARVIQAIDCLPSNMQKVLEVSLEM  147

Query  148  DGSYQDIAAHLNIPIGTVRSRLSRARVTLKQSV  180
            DG+YQ+ A  L +PIGTVRSRLS ARV LKQ +
Sbjct  148  DGNYQETANSLGVPIGTVRSRLSGARVQLKQQI  180

18) hrpL in NC_013971


> AF232004|9|G8|13325078|AAG33875.2|Pseudomonas_syringae_pv._tomato_DC3000|-|10560..11114|hrpL|-|HrpL
Length=184

 Score =  103 bits (372),  Expect = 8e-24, Method: Compositional matrix adjust.
 Identities = 68/153 (45%), Positives = 102/153 (67%), Gaps = 2/153 (1%)

Query  30   EHGRRVHHFIRKRVSHREDAEDLEQMTWLEVLRNRDKFAGASRPETWVFGIALNLVRNHF  89
            ++ + ++ FI+KRV + +D +D+ Q   LE LRN +KF  AS+P+TW+ GIALNL+RNHF
Sbjct  28   DQIQMLRAFIQKRVMNPDDVDDILQCVFLEALRNEHKFQHASKPQTWLCGIALNLIRNHF  87

Query  90   RLQSGRPRCDELEDDI--ILTQGDDPSHITEYQRLLNSTLNSIANLPEDTRRLLNMLVEK  147
            R    +P  +  ED++   L   +D SH  E +R L   +++I  LP + +++L++ +E 
Sbjct  88   RKMYRQPYQESWEDEVHSELEGHGDVSHQVEGHRQLARVIQAIDCLPSNMQKVLEVSLEM  147

Query  148  DGSYQAIAAHLNIPIGTVRSRLSRARVTLKQSV  180
            DG+YQ  A  L +PIGTVRSRLS ARV LKQ +
Sbjct  148  DGNYQETANSLGVPIGTVRSRLSGARVQLKQQI  180

19) hrpL in NC_013961


> AF232004|9|G8|13325078|AAG33875.2|Pseudomonas_syringae_pv._tomato_DC3000|-|10560..11114|hrpL|-|HrpL
Length=184

 Score =  103 bits (372),  Expect = 8e-24, Method: Compositional matrix adjust.
 Identities = 68/153 (45%), Positives = 102/153 (67%), Gaps = 2/153 (1%)

Query  30   EHGRRVHHFIRKRVSHREDAEDLEQMTWLEVLRNRDKFAGASRPETWVFGIALNLVRNHF  89
            ++ + ++ FI+KRV + +D +D+ Q   LE LRN +KF  AS+P+TW+ GIALNL+RNHF
Sbjct  28   DQIQMLRAFIQKRVMNPDDVDDILQCVFLEALRNEHKFQHASKPQTWLCGIALNLIRNHF  87

Query  90   RLQSGRPRCDELEDDI--ILTQGDDPSHITEYQRLLNSTLNSIANLPEDTRRLLNMLVEK  147
            R    +P  +  ED++   L   +D SH  E +R L   +++I  LP + +++L++ +E 
Sbjct  88   RKMYRQPYQESWEDEVHSELEGHGDVSHQVEGHRQLARVIQAIDCLPSNMQKVLEVSLEM  147

Query  148  DGSYQAIAAHLNIPIGTVRSRLSRARVTLKQSV  180
            DG+YQ  A  L +PIGTVRSRLS ARV LKQ +
Sbjct  148  DGNYQETANSLGVPIGTVRSRLSGARVQLKQQI  180

20) hrpL in NC_014500


> AF232004|9|G8|13325078|AAG33875.2|Pseudomonas_syringae_pv._tomato_DC3000|-|10560..11114|hrpL|-|HrpL
Length=184

 Score =  102 bits (371),  Expect = 1e-23, Method: Compositional matrix adjust.
 Identities = 69/153 (46%), Positives = 102/153 (67%), Gaps = 5/153 (3%)

Query  34   LQNFIRKRVSNREDVEDLQQMTYLEVLKNREKFAGASRPETWVFGIALNLVRNHFKQARY  93
            L+ FI+KRV N +DV+D+ Q  +LE L+N +KF  AS+P+TW+ GIALNL+RNHF++  Y
Sbjct  33   LRAFIQKRVMNPDDVDDILQCVFLEALRNEHKFQHASKPQTWLCGIALNLIRNHFRK-MY  91

Query  94   RAV--DISDDALEVAEILSTDIDPSRITECDHSLNRALAASAHLPEETRKMLMMLLDADV  151
            R    +  +D  EV   L  + D S+  E ++ L R + A   LP + +K+L + L+ D 
Sbjct  92   RQPYQESWED--EVHSELEGHGDVSHQVEGHRQLARVIQAIDCLPSNMQKVLEVSLEMDG  149

Query  152  SYQDIAEQLNIPIGTVRSRLSRARGYLRQAVDA  184
            +YQ+ A+ L +PIGTVRSRLS AR  L+Q +D+
Sbjct  150  NYQETANSLGVPIGTVRSRLSGARVQLKQQIDP  182

21) Dd586_1890 in NC_013592


> AF232004|9|G8|13325078|AAG33875.2|Pseudomonas_syringae_pv._tomato_DC3000|-|10560..11114|hrpL|-|HrpL
Length=184

 Score =  100 bits (364),  Expect = 3e-23, Method: Compositional matrix adjust.
 Identities = 67/153 (44%), Positives = 101/153 (67%), Gaps = 5/153 (3%)

Query  34   LQNFIRKRVSNREDVEDLQQMTYLEVLKNREKFAGASRPETWVFGIALNLVRNHFKQARY  93
            L+ FI+KRV N +DV+D+ Q  +LE L+N +KF  AS+P+TW+ GIALNL+RNHF++  Y
Sbjct  33   LRAFIQKRVMNPDDVDDILQCVFLEALRNEHKFQHASKPQTWLCGIALNLIRNHFRK-MY  91

Query  94   RTV--DISDEVLEVVEVMSTDIDPSRITECDHALDRALAASAHLPEDTRKMLVMLLDADI  151
            R    +  ++  EV   +  + D S+  E ++ L R + A   LP + +K+L + L+ D 
Sbjct  92   RQPYQESWED--EVHSELEGHGDVSHQVEGHRQLARVIQAIDCLPSNMQKVLEVSLEMDG  149

Query  152  SYQDIATQLNIPIGTVRSRLSRARGYLRQAVDA  184
            +YQ+ A  L +PIGTVRSRLS AR  L+Q +D+
Sbjct  150  NYQETANSLGVPIGTVRSRLSGARVQLKQQIDP  182

22) Ser39006_2911 in NC_022268


> AF232004|9|G8|13325078|AAG33875.2|Pseudomonas_syringae_pv._tomato_DC3000|-|10560..11114|hrpL|-|HrpL
Length=184

 Score = 99.6 bits (359),  Expect = 9e-23, Method: Compositional matrix adjust.
 Identities = 67/150 (45%), Positives = 102/150 (68%), Gaps = 2/150 (1%)

Query  34   LHNFIRKRVSNREDVEDLQQMTYLEVLKNSEKFAGASRPETWVFGIALNLVRNHFKQARI  93
            L+ FI+KRV N +DV+D+ Q  +LE L+N +KF  AS+P+TW+ GIALNL+RNHF++   
Sbjct  33   LRAFIQKRVMNPDDVDDILQCVFLEALRNEHKFQHASKPQTWLCGIALNLIRNHFRKMYR  92

Query  94   RANEVG--DEILEFLSNDIDPSRIVECDYSLVRAVAATAQLPEETRKMLLMLIDSDVSYQ  151
            ++ + +  DE+   L  + D S+ VE +  L R + A   LP + +K+L + ++ D +YQ
Sbjct  93   QPYQESWEDEVHSELEGHGDVSHQVEGHRQLARVIQAIDCLPSNMQKVLEVSLEMDGNYQ  152

Query  152  DIANMLNIPIGTVRSRLSRARHFLRQAVDA  181
            + AN L +PIGTVRSRLS AR  L+Q +D+
Sbjct  153  ETANSLGVPIGTVRSRLSGARVQLKQQIDP  182

23) Dd1591_1893 in NC_012912


> AF232004|9|G8|13325078|AAG33875.2|Pseudomonas_syringae_pv._tomato_DC3000|-|10560..11114|hrpL|-|HrpL
Length=184

 Score = 92.8 bits (333),  Expect = 1e-20, Method: Compositional matrix adjust.
 Identities = 70/152 (47%), Positives = 105/152 (70%), Gaps = 3/152 (1%)

Query  34   LQNFIRKRVSNREDVEDLQQMTYLEVLKNREKFAGASRPETWVFGIALNLVRNHFKQARY  93
            L+ FI+KRV N +DV+D+ Q  +LE L+N +KF  AS+P+TW+ GIALNL+RNHF++  Y
Sbjct  33   LRAFIQKRVMNPDDVDDILQCVFLEALRNEHKFQHASKPQTWLCGIALNLIRNHFRK-MY  91

Query  94   R-AFDISDEALEVAEILSTDIDPSRITECDhslsralaasahlPEETRKMLMMLLDADVS  152
            R +++ S E  EV   L  + D S+  E ++ L+R + A   LP + +K+L + L+ D +
Sbjct  92   RQPYQESWED-EVHSELEGHGDVSHQVEGHRQLARVIQAIDCLPSNMQKVLEVSLEMDGN  150

Query  153  YQDIAEQLNIPIGTVRSRLSRARGYLRQAVDA  184
            YQ+ A+ L +PIGTVRSRLS AR  L+Q +D+
Sbjct  151  YQETANSLGVPIGTVRSRLSGARVQLKQQIDP  182

24) hrpL in NC_010694


> AF232004|9|G8|13325078|AAG33875.2|Pseudomonas_syringae_pv._tomato_DC3000|-|10560..11114|hrpL|-|HrpL
Length=184

 Score = 85.7 bits (306),  Expect = 1e-18, Method: Compositional matrix adjust.
 Identities = 55/137 (41%), Positives = 91/137 (67%), Gaps = 2/137 (1%)

Query  30   EHGRRVHHFIRKRVSHREDAEDLEQMTWLEVLRNRDKFAGASRPETWVFGIALNLVRNHF  89
            ++ + ++ FI+KRV + +D +D+ Q   LE LRN +KF  AS+P+TW+ GIALNL+RNHF
Sbjct  28   DQIQMLRAFIQKRVMNPDDVDDILQCVFLEALRNEHKFQHASKPQTWLCGIALNLIRNHF  87

Query  90   RLQSGRPRCDELEDDI-VVVQG-DDPSHITEHQRILTSTLNSIAALPEDTRRLMSMLVEK  147
            R    +P  +  ED++   ++G +D SH  E +R L+  +++I  LP + ++++ + +E 
Sbjct  88   RKMYRQPYQESWEDEVHSELEGHGDVSHQVEGHRQLARVIQAIDCLPSNMQKVLEVSLEM  147

Query  148  DGSYQAIAAHLNIPIGT  164
            DG+YQ  A  L +PIGT
Sbjct  148  DGNYQETANSLGVPIGT  164