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PAthogenisity Island DataBase (PAI DB)

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Homologs of SSU98_0993 gene of NC_009443_P1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) SAG1297
( NP_688295.1 )

C-5 cytosine-specific DNA methylase

NC_004116
(Streptococcus agalactiae 2603V/R)

0.0

2) SDE12394_04580
( YP_006012994.1 )

C-5 cytosine-specific DNA methylase

NC_017567
(Streptococcus dysgalactiae ATCC 12394)

0.0

3) SSUD12_1338
( YP_006082874.1 )

DNA-cytosine methyltransferase

NC_017621
(Streptococcus suis D12)

0.0

4) SSUBM407_0458
( YP_003028219.1 )

C-5 cytosine-specific DNA methylase

NC_012926
(Streptococcus suis BM407)

0.0

5) SSU12_0908
( YP_006078339.1 )

C-5 cytosine-specific DNA methylase

NC_017619
(Streptococcus suis SS12)

0.0

6) SSUD9_1083
( YP_006080532.1 )

DNA-cytosine methyltransferase

NC_017620
(Streptococcus suis D9)

0.0

7) BSA_13780
( YP_008085027.1 )

DNA-cytosine methyltransferase

NC_021485
(Streptococcus agalactiae 09mas018883)

0.0

8) SP70585_1071
( YP_002740333.1 )

methyl transferase

NC_012468
(Streptococcus pneumoniae 70585)

0.0

9) SSUJS14_0569
( YP_006075937.1 )

DNA-cytosine methyltransferase

NC_017618
(Streptococcus suis JS14)

0.0

10) NJAUSS_0563
( YP_007570518.1 )

C-5 cytosine-specific DNA methylase

NC_020526
(Streptococcus suis SC070731)

0.0

11) dcm.2
( YP_004559289.1 )

DNA (cytosine-5-)-methyltransferase

NC_015600
(Streptococcus pasteurianus ATCC 43144)

0.0

12) SSU05_0979
( YP_001198345.1 )

C-5 cytosine-specific DNA methylase

NC_009442
(Streptococcus suis 05ZYH33)

0.0

100

13) SSU98_0993
( YP_001200551.1 )

C-5 cytosine-specific DNA methylase

NC_009443
(Streptococcus suis 98HAH33)

0.0

100

14) SSUBM407_0935
( YP_003028680.1 )

C-5 cytosine-specific DNA methylase

NC_012926
(Streptococcus suis BM407)

0.0

100

15) SSUSC84_0887
( YP_003024896.1 )

C-5 cytosine-specific DNA methylase

NC_012924
(Streptococcus suis SC84)

0.0

100

16) SANR_1206
( YP_008500921.1 )

DNA methylase

NC_022239
(Streptococcus anginosus C238)

0.0

17) SZO_17990
( YP_002745294.1 )

C-5 cytosine-specific DNA methylase

NC_012470
(Streptococcus equi H70)

7e-178

18) gbs1370
( NP_735807.1 )

hypothetical protein

NC_004368
(Streptococcus agalactiae NEM316)

1e-177

19) SMA_1430
( YP_005095049.1 )

Modification methylase HgiDII

NC_016749
(Streptococcus macedonicus ACA-DC 198)

6e-177

20) STH8232_0659
( YP_006040338.1 )

C-5 cytosine-specific DNA methylase

NC_017581
(Streptococcus thermophilus JIM 8232)

1e-169

21) HMPREF1038_01337
( YP_006743493.1 )

type II DNA modification methyltransferase Spn5252IP

NC_018630
(Streptococcus pneumoniae gamPNI0373)

1e-163

22) SPH_1233
( YP_001694558.1 )

methyl transferase

NC_010380
(Streptococcus pneumoniae Hungary19A-6)

5e-163

23) smi_0787
( YP_003445902.1 )

methyl transferase

NC_013853
(Streptococcus mitis B6)

1e-160

24) SPP_1145
( YP_002738290.1 )

methyl transferase

NC_012467
(Streptococcus pneumoniae P1031)

2e-160

25) SPN23F_13150
( YP_002511246.1 )

DNA methylase

NC_011900
(Streptococcus pneumoniae ATCC 700669)

2e-160

26) SPCG_1339
( YP_001836056.1 )

type II DNA modification methyltransferase Spn5252IP

NC_010582
(Streptococcus pneumoniae CGSP14)

2e-160

27) Spaf_1137
( YP_006309939.1 )

putative DNA methylase

NC_017905
(Streptococcus parasanguinis FW213)

7e-160

28) SPG_1291
( YP_002037999.1 )

Tn5253 C-5 cytosine-specific DNA methylase

NC_011072
(Streptococcus pneumoniae G54)

2e-159

29) SII_0621
( YP_008496803.1 )

DNA methylase

NC_022237
(Streptococcus intermedius C270)

1e-152

30) SP_1336
( NP_345794.1 )

type II DNA modification methyltransferase Spn5252IP

NC_003028
(Streptococcus pneumoniae TIGR4)

2e-148

31) dcm
( YP_006043458.1 )

C-5 cytosine-specific DNA methylase

NC_017582
(Streptococcus equi ATCC 35246)

3e-147

32) SPAP_1364
( YP_003876952.1 )

site-specific DNA methylase

NC_014494
(Streptococcus pneumoniae AP200)

9e-144

33) dcm2
( YP_006035011.1 )

DNA (cytosine-5-)-methyltransferase

NC_017576
(Streptococcus gallolyticus ATCC 43143)

1e-117

34) KE3_1019
( YP_008356317.1 )

C-5 cytosine-specific DNA methylase

NC_021900
(Streptococcus lutetiensis 033)

1e-117

35) SAG1869
( NP_688859.1 )

prophage LambdaSa2, type II DNA modification methyltransferase

NC_004116
(Streptococcus agalactiae 2603V/R)

1e-105

36) MYY_0063
( YP_006252261.1 )

type II DNA modification methyltransferase

NC_017769
(Streptococcus pneumoniae ST556)

5e-106

37) lmo4a_1229
( YP_005926222.1 )

C-5 cytosine-specific DNA methylase

NC_017529
(Listeria monocytogenes L99)

8e-100

38) lmo4a_2641
( YP_005927634.1 )

C-5 cytosine-specific DNA methylase

NC_017529
(Listeria monocytogenes L99)

8e-100

39) LM220_21930
( YP_008291214.1 )

DNA methyltransferase

NC_021830
(Listeria monocytogenes J1-220)

7e-99

40) EFAU085_02797
( YP_008396317.1 )

C-5 cytosine-specific DNA methylase

NC_021994
(Enterococcus faecium AUS0085)

3e-95

41) EFAU004_01862
( YP_005355064.1 )

C-5 cytosine-specific DNA methylase

NC_017022
(Enterococcus faecium Aus0004)

2e-94

42) EFAU085_01892
( YP_008395414.1 )

C-5 cytosine-specific DNA methylase

NC_021994
(Enterococcus faecium AUS0085)

2e-94

43) HMPREF0351_11823
( YP_006376429.1 )

DNA (cytosine-5-)-methyltransferase

NC_017960
(Enterococcus faecium DO)

2e-94

44) SPN23F_15670
( YP_002511465.1 )

DNA methylase

NC_011900
(Streptococcus pneumoniae ATCC 700669)

2e-91

45) EFD32_pB0060
( YP_006539321.1 )

C-5 cytosine-specific DNA methylase

NC_018223
(Enterococcus faecalis D32)

2e-85

46) Bsph_3739
( YP_001699353.1 )

modification methylase SPRI

NC_010382
(Lysinibacillus sphaericus C3-41)

6e-84

47) LMHCC_1402
( YP_002350361.1 )

cytosine-specific methyltransferase

NC_011660
(Listeria monocytogenes HCC23)

1e-81

48) LMM7_1254
( YP_005947317.1 )

cytosine-specific methyltransferase

NC_017537
(Listeria monocytogenes M7)

1e-81

49) EF2340
( NP_815995.1 )

C-5 cytosine-specific DNA methylase

NC_004668
(Enterococcus faecalis V583)

1e-72

50) Clocel_0773
( YP_003842307.1 )

DNA-cytosine methyltransferase

NC_014393
(Clostridium cellulovorans 743B)

2e-49

• Sequence Alignments

1) SAG1297 in NC_004116


> NC_009443_P1|86|G86|146320840|YP_001200551.1|Streptococcus_suis_98HAH33|-|86097..87452|-|SSU98_0993|C-5 
cytosine-specific 
DNA methylase
Length=451

 Score =  706 bits (2670),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 425/435 (98%), Positives = 435/435 (100%), Gaps = 0/435 (0%)

Query  1    MKFLDLFAGIGGFRLGMESQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHD  60
            MKFLDLFAGIGGFRLGMESQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHD
Sbjct  1    MKFLDLFAGIGGFRLGMESQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHD  60

Query  61   FRQFRGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL  120
            FRQFRGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL
Sbjct  61   FRQFRGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL  120

Query  121  LNHDEGRTFATILSTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYRSRFIFPLR  180
            LNHDEGRTFATILSTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYR+RF+FPLR
Sbjct  121  LNHDEGRTFATILSTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYRPRFLFPLR  180

Query  181  REDSPAHLERLGNINPSKHGLNGEVYLTSGLAPTLTRGKGEGAKIAIPVLTPDRLEKRQH  240
            RE+SPAHLERLGNINPSK+GLNGEVYLT+GLAPTLTRGKGEGAKIAIPVLTPDRLEKRQH
Sbjct  181  RENSPAHLERLGNINPSKRGLNGEVYLTNGLAPTLTRGKGEGAKIAIPVLTPDRLEKRQH  240

Query  241  GRRFKDNQDPMFTLTSQDKHGVVVAGNLPTSFDQTGRVFDISGLSPTLTTMQGGDKVPKI  300
            GRR+KDNQDPMFTLTSQD+HGVVVAGNLPTSFDQTGRVFDISGLSPTLTTMQGGDKVPKI
Sbjct  241  GRRLKDNQDPMFTLTSQDRHGVVVAGNLPTSFDQTGRVFDISGLSPTLTTMQGGDKVPKI  300

Query  301  LLREELPFLKIKEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNMGVVV  360
            LLREELPFLKIKEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNMGVVV
Sbjct  301  LLREELPFLKIKEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNMGVVV  360

Query  361  AALEYRQDKWYEVTGIVLEGKLYRLRIRRLTPRECFRLQGFPDWAYERAESVSSKSQLYK  420
            AALEYRQDKWYEVTGIVLEGKLYRLRIRRLTPRECFRLQGFPDWA+++AESVSSKSQLYK
Sbjct  361  AALEYRQDKWYEVTGIVLEGKLYRLRIRRLTPRECFRLQGFPDWAFDKAESVSSKSQLYK  420

Query  421  QAGNSVTVTVIEAIA  435
            QAGNSVTVTVIEAIA
Sbjct  421  QAGNSVTVTVIEAIA  435

2) SDE12394_04580 in NC_017567


> NC_009443_P1|86|G86|146320840|YP_001200551.1|Streptococcus_suis_98HAH33|-|86097..87452|-|SSU98_0993|C-5 
cytosine-specific 
DNA methylase
Length=451

 Score =  706 bits (2670),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 425/435 (98%), Positives = 435/435 (100%), Gaps = 0/435 (0%)

Query  1    MKFLDLFAGIGGFRLGMESQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHD  60
            MKFLDLFAGIGGFRLGMESQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHD
Sbjct  1    MKFLDLFAGIGGFRLGMESQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHD  60

Query  61   FRQFRGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL  120
            FRQFRGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL
Sbjct  61   FRQFRGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL  120

Query  121  LNHDEGRTFATILSTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYRSRFIFPLR  180
            LNHDEGRTFATILSTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYR+RF+FPLR
Sbjct  121  LNHDEGRTFATILSTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYRPRFLFPLR  180

Query  181  REDSPAHLERLGNINPSKHGLNGEVYLTSGLAPTLTRGKGEGAKIAIPVLTPDRLEKRQH  240
            RE+SPAHLERLGNINPSK+GLNGEVYLT+GLAPTLTRGKGEGAKIAIPVLTPDRLEKRQH
Sbjct  181  RENSPAHLERLGNINPSKRGLNGEVYLTNGLAPTLTRGKGEGAKIAIPVLTPDRLEKRQH  240

Query  241  GRRFKDNQDPMFTLTSQDKHGVVVAGNLPTSFDQTGRVFDISGLSPTLTTMQGGDKVPKI  300
            GRR+KDNQDPMFTLTSQD+HGVVVAGNLPTSFDQTGRVFDISGLSPTLTTMQGGDKVPKI
Sbjct  241  GRRLKDNQDPMFTLTSQDRHGVVVAGNLPTSFDQTGRVFDISGLSPTLTTMQGGDKVPKI  300

Query  301  LLREELPFLKIKEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNMGVVV  360
            LLREELPFLKIKEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNMGVVV
Sbjct  301  LLREELPFLKIKEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNMGVVV  360

Query  361  AALEYRQDKWYEVTGIVLEGKLYRLRIRRLTPRECFRLQGFPDWAYERAESVSSKSQLYK  420
            AALEYRQDKWYEVTGIVLEGKLYRLRIRRLTPRECFRLQGFPDWA+++AESVSSKSQLYK
Sbjct  361  AALEYRQDKWYEVTGIVLEGKLYRLRIRRLTPRECFRLQGFPDWAFDKAESVSSKSQLYK  420

Query  421  QAGNSVTVTVIEAIA  435
            QAGNSVTVTVIEAIA
Sbjct  421  QAGNSVTVTVIEAIA  435

3) SSUD12_1338 in NC_017621


> NC_009443_P1|86|G86|146320840|YP_001200551.1|Streptococcus_suis_98HAH33|-|86097..87452|-|SSU98_0993|C-5 
cytosine-specific 
DNA methylase
Length=451

 Score =  706 bits (2670),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 424/435 (98%), Positives = 434/435 (99%), Gaps = 0/435 (0%)

Query  1    MKFLDLFAGIGGFRLGMESQGHECLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHD  60
            MKFLDLFAGIGGFRLGMESQGH CLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHD
Sbjct  1    MKFLDLFAGIGGFRLGMESQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHD  60

Query  61   FRQFRGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL  120
            FRQFRGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL
Sbjct  61   FRQFRGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL  120

Query  121  LNHDEGRTFATILSTMDELGYDVEWQVLNSKDFQVPQNRERVYIIGHSRRYRPRFIFPLR  180
            LNHDEGRTFATILST+DELGYDVEWQVLNSKDFQVPQNRERV+IIGHSRRYRPRF+FPLR
Sbjct  121  LNHDEGRTFATILSTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYRPRFLFPLR  180

Query  181  RENSPAHLERLGNINPSKRGLNGEVYLTSGLAPTLTRGKGEGAKIAIPVLTPDRLEKRQH  240
            RENSPAHLERLGNINPSKRGLNGEVYLT+GLAPTLTRGKGEGAKIAIPVLTPDRLEKRQH
Sbjct  181  RENSPAHLERLGNINPSKRGLNGEVYLTNGLAPTLTRGKGEGAKIAIPVLTPDRLEKRQH  240

Query  241  GRRFKDNQDPMFTLTSQDKHGIVVAGNLPTSFDQTGRVFDISGLSPTLTTMQGGDKVPKI  300
            GRR+KDNQDPMFTLTSQD+HG+VVAGNLPTSFDQTGRVFDISGLSPTLTTMQGGDKVPKI
Sbjct  241  GRRLKDNQDPMFTLTSQDRHGVVVAGNLPTSFDQTGRVFDISGLSPTLTTMQGGDKVPKI  300

Query  301  LLREELPFLKIKEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNMGVVV  360
            LLREELPFLKIKEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNMGVVV
Sbjct  301  LLREELPFLKIKEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNMGVVV  360

Query  361  AALEYRQDKWYEVTGIVLEGKLYRLRIRRLTPRECFRLQGFPDWAYERAESVSSKSQLYK  420
            AALEYRQDKWYEVTGIVLEGKLYRLRIRRLTPRECFRLQGFPDWA+++AESVSSKSQLYK
Sbjct  361  AALEYRQDKWYEVTGIVLEGKLYRLRIRRLTPRECFRLQGFPDWAFDKAESVSSKSQLYK  420

Query  421  QAGNSVTVTVIEAIA  435
            QAGNSVTVTVIEAIA
Sbjct  421  QAGNSVTVTVIEAIA  435

4) SSUBM407_0458 in NC_012926


> NC_009443_P1|86|G86|146320840|YP_001200551.1|Streptococcus_suis_98HAH33|-|86097..87452|-|SSU98_0993|C-5 
cytosine-specific 
DNA methylase
Length=451

 Score =  704 bits (2661),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 424/435 (98%), Positives = 433/435 (99%), Gaps = 0/435 (0%)

Query  1    MKFLDLFAGIGGFRLGMESQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHD  60
            MKFLDLFAGIGGFRLGMESQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHD
Sbjct  1    MKFLDLFAGIGGFRLGMESQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHD  60

Query  61   FRQFRGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL  120
            FRQFRGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL
Sbjct  61   FRQFRGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL  120

Query  121  LNHDEGRTFATILSTMDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYRSRFIFPLR  180
            LNHDEGRTFATILST+DELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYR+RF+FPLR
Sbjct  121  LNHDEGRTFATILSTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYRPRFLFPLR  180

Query  181  GENSPAHLERLGNINPSKRGLNGEVYLTSGLAPTLTRGKGEGAKIAIPVLTPDRLEKRQH  240
             ENSPAHLERLGNINPSKRGLNGEVYLT+GLAPTLTRGKGEGAKIAIPVLTPDRLEKRQH
Sbjct  181  RENSPAHLERLGNINPSKRGLNGEVYLTNGLAPTLTRGKGEGAKIAIPVLTPDRLEKRQH  240

Query  241  GRRFKDNQDPMFTLTSQDRHGVVVAGNLPTSFDQTGRVFDISGLSPTLTTMQGGDKVPKI  300
            GRR+KDNQDPMFTLTSQDRHGVVVAGNLPTSFDQTGRVFDISGLSPTLTTMQGGDKVPKI
Sbjct  241  GRRLKDNQDPMFTLTSQDRHGVVVAGNLPTSFDQTGRVFDISGLSPTLTTMQGGDKVPKI  300

Query  301  LLREELPFLKIKEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNMGVVV  360
            LLREELPFLKIKEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNMGVVV
Sbjct  301  LLREELPFLKIKEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNMGVVV  360

Query  361  AAMEYRQAKWYEVTGIVLEGKLYRLRIRRLTPRECFRLQGFPDWAYERAESVSSKSQLYK  420
            AA+EYRQ KWYEVTGIVLEGKLYRLRIRRLTPRECFRLQGFPDWA+++AESVSSKSQLYK
Sbjct  361  AALEYRQDKWYEVTGIVLEGKLYRLRIRRLTPRECFRLQGFPDWAFDKAESVSSKSQLYK  420

Query  421  QAGNSVTVTVIEAIA  435
            QAGNSVTVTVIEAIA
Sbjct  421  QAGNSVTVTVIEAIA  435

5) SSU12_0908 in NC_017619


> NC_009443_P1|86|G86|146320840|YP_001200551.1|Streptococcus_suis_98HAH33|-|86097..87452|-|SSU98_0993|C-5 
cytosine-specific 
DNA methylase
Length=451

 Score =  703 bits (2660),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 422/435 (98%), Positives = 433/435 (99%), Gaps = 0/435 (0%)

Query  1    MKFLDLFAGIGGFRLGMESQGHKCVGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHD  60
            MKFLDLFAGIGGFRLGMESQGHKC+GFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHD
Sbjct  1    MKFLDLFAGIGGFRLGMESQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHD  60

Query  61   FRQFRGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAQQIQPRFLFLENVKGL  120
            FRQFRGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAA+QIQPRFLFLENVKGL
Sbjct  61   FRQFRGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL  120

Query  121  LNHDKGRTFATILSTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYRSRFIFPLR  180
            LNHD GRTFATILSTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYR+RF+FPLR
Sbjct  121  LNHDEGRTFATILSTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYRPRFLFPLR  180

Query  181  RENSPAHLERLGNINPSKRGLNGEVYLTSGLAPTLTRGKGEGAKIAIPVLTPDRLEKRQH  240
            RENSPAHLERLGNINPSKRGLNGEVYLT+GLAPTLTRGKGEGAKIAIPVLTPDRLEKRQH
Sbjct  181  RENSPAHLERLGNINPSKRGLNGEVYLTNGLAPTLTRGKGEGAKIAIPVLTPDRLEKRQH  240

Query  241  GRRFKDNQDPMFTLTSQDRHGVVVAGNLPTSFDQTGRVFDISGLSPTLTTMQGGEKVPKI  300
            GRR+KDNQDPMFTLTSQDRHGVVVAGNLPTSFDQTGRVFDISGLSPTLTTMQGG+KVPKI
Sbjct  241  GRRLKDNQDPMFTLTSQDRHGVVVAGNLPTSFDQTGRVFDISGLSPTLTTMQGGDKVPKI  300

Query  301  LLREELPFLKIKEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNMGVVV  360
            LLREELPFLKIKEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNMGVVV
Sbjct  301  LLREELPFLKIKEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNMGVVV  360

Query  361  AALEYRQAKWYEVTGIVLDGKLYRLRIRRLTPRECFRLQGFPDWAYERAESVSSKSQLYK  420
            AALEYRQ KWYEVTGIVL+GKLYRLRIRRLTPRECFRLQGFPDWA+++AESVSSKSQLYK
Sbjct  361  AALEYRQDKWYEVTGIVLEGKLYRLRIRRLTPRECFRLQGFPDWAFDKAESVSSKSQLYK  420

Query  421  QAGNSVTVTVIEAIA  435
            QAGNSVTVTVIEAIA
Sbjct  421  QAGNSVTVTVIEAIA  435

6) SSUD9_1083 in NC_017620


> NC_009443_P1|86|G86|146320840|YP_001200551.1|Streptococcus_suis_98HAH33|-|86097..87452|-|SSU98_0993|C-5 
cytosine-specific 
DNA methylase
Length=451

 Score =  701 bits (2650),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 435/451 (97%), Positives = 448/451 (99%), Gaps = 0/451 (0%)

Query  1    MKFLDLFAGIGGFRLGLESQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHD  60
            MKFLDLFAGIGGFRLG+ESQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHD
Sbjct  1    MKFLDLFAGIGGFRLGMESQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHD  60

Query  61   FRQFRGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL  120
            FRQFRGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL
Sbjct  61   FRQFRGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL  120

Query  121  LNHDEGRTFATILSTMDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYRPRFIFPLR  180
            LNHDEGRTFATILST+DELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYRPRF+FPLR
Sbjct  121  LNHDEGRTFATILSTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYRPRFLFPLR  180

Query  181  RENSPAHLERLGNINPSKRGLNGEVYLTSGLAPTLTRGKGEGAKIAIPVLTPDRLEKRQH  240
            RENSPAHLERLGNINPSKRGLNGEVYLT+GLAPTLTRGKGEGAKIAIPVLTPDRLEKRQH
Sbjct  181  RENSPAHLERLGNINPSKRGLNGEVYLTNGLAPTLTRGKGEGAKIAIPVLTPDRLEKRQH  240

Query  241  GHRFKENQDPMFTLTSQDRHGVVVAGNLPTSFDQTGRVFDISGLSPTLTTMQGGDKVPKI  300
            G+R+K+NQDPMFTLTSQDRHGVVVAGNLPTSFDQTGRVFDISGLSPTLTTMQGGDKVPKI
Sbjct  241  GRRLKDNQDPMFTLTSQDRHGVVVAGNLPTSFDQTGRVFDISGLSPTLTTMQGGDKVPKI  300

Query  301  LLREELPFLKIKEATKRGYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNMGVVV  360
            LLREELPFLKIKEATK GYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNMGVVV
Sbjct  301  LLREELPFLKIKEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNMGVVV  360

Query  361  AALEYRQDKWYEVTGIVLEGKLYRLKIRRLTPRECFRLQGFPDWAYERAEGVTSKSQLYK  420
            AALEYRQDKWYEVTGIVLEGKLYRL+IRRLTPRECFRLQGFPDWA+++AE+V+SKSQLYK
Sbjct  361  AALEYRQDKWYEVTGIVLEGKLYRLRIRRLTPRECFRLQGFPDWAFDKAESVSSKSQLYK  420

Query  421  QAGNSVTVTVieaiarefrrmeeeeKHEPTT  451
            QAGNSVTVTVIEAIA EFRR EEEEKHEPTT
Sbjct  421  QAGNSVTVTVIEAIASEFRRTEEEEKHEPTT  451

7) BSA_13780 in NC_021485


> NC_009443_P1|86|G86|146320840|YP_001200551.1|Streptococcus_suis_98HAH33|-|86097..87452|-|SSU98_0993|C-5 
cytosine-specific 
DNA methylase
Length=451

 Score =  695 bits (2628),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 423/435 (98%), Positives = 432/435 (99%), Gaps = 0/435 (0%)

Query  1    MKFLDLFAGIGGFRLGMESQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHD  60
            MKFLDLFAGIGGFRLGMESQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHD
Sbjct  1    MKFLDLFAGIGGFRLGMESQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHD  60

Query  61   FRQFRGQVDIICGGFPCQAFSLAGRRLGLEDTRGTLFFEIARAAKQIQPRFLFLENVKGL  120
            FRQFRGQVDIICGGFPCQAFSLAGRRLG+EDTRGTLFFEIARAAKQIQPRFLFLENVKGL
Sbjct  61   FRQFRGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL  120

Query  121  LNHDEGRTFATILSTMDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYRSRFLFPLR  180
            LNHDEGRTFATILST+DELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYR+RFLFPLR
Sbjct  121  LNHDEGRTFATILSTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYRPRFLFPLR  180

Query  181  GENSPAHLERLGNINPSKCGLNGEVYLTSGLAPTLTRGKGEGAKIAIPVLTPDRLEKRQH  240
             ENSPAHLERLGNINPSK GLNGEVYLT+GLAPTLTRGKGEGAKIAIPVLTPDRLEKRQH
Sbjct  181  RENSPAHLERLGNINPSKRGLNGEVYLTNGLAPTLTRGKGEGAKIAIPVLTPDRLEKRQH  240

Query  241  GRRFKDNQDLMFTLTSQDRHGVVVAGNLPTSFDQTGRVFDISGLSPTLTTMQGGDKVPKI  300
            GRR+KDNQD MFTLTSQDRHGVVVAGNLPTSFDQTGRVFDISGLSPTLTTMQGGDKVPKI
Sbjct  241  GRRLKDNQDPMFTLTSQDRHGVVVAGNLPTSFDQTGRVFDISGLSPTLTTMQGGDKVPKI  300

Query  301  LLREELPLLKIKEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNMGVVV  360
            LLREELP+LKIKEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNMGVVV
Sbjct  301  LLREELPFLKIKEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNMGVVV  360

Query  361  AALEYRQDKWYEVTGIVLEGKLYRLRIRRLTPRECFRLQGFPDWAYERAESVSSKSQLYK  420
            AALEYRQDKWYEVTGIVLEGKLYRLRIRRLTPRECFRLQGFPDWA+++AESVSSKSQLYK
Sbjct  361  AALEYRQDKWYEVTGIVLEGKLYRLRIRRLTPRECFRLQGFPDWAFDKAESVSSKSQLYK  420

Query  421  QAGNSVTVTVIEAIA  435
            QAGNSVTVTVIEAIA
Sbjct  421  QAGNSVTVTVIEAIA  435

8) SP70585_1071 in NC_012468


> NC_009443_P1|86|G86|146320840|YP_001200551.1|Streptococcus_suis_98HAH33|-|86097..87452|-|SSU98_0993|C-5 
cytosine-specific 
DNA methylase
Length=451

 Score =  694 bits (2625),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 431/451 (96%), Positives = 443/451 (99%), Gaps = 0/451 (0%)

Query  1    MKFLDLFAGIGGFRLGMEAQGHECLGFCEIDKFARTSYKAMFKTEEEIEYHDIKEVTDHD  60
            MKFLDLFAGIGGFRLGME+QGH CLGFCEIDKFARTSYKAMF+TE EIEYHDIKEVTDHD
Sbjct  1    MKFLDLFAGIGGFRLGMESQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHD  60

Query  61   IRQFRGQVDVICGGFPCQAFSLAGRRLGFEDTRGTLFFEIVRCAKQIQPRFLFLENVKGL  120
            +RQFRGQVD+ICGGFPCQAFSLAGRRLGFEDTRGTLFFEI R AKQIQPRFLFLENVKGL
Sbjct  61   FRQFRGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL  120

Query  121  LNHDEGRTFATILSTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYRSRFLFPLR  180
            LNHDEGRTFATILSTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYR+RFLFPLR
Sbjct  121  LNHDEGRTFATILSTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYRPRFLFPLR  180

Query  181  RENSPAHLERLGNINPSKRGLNGEVYLTTGLAPTLTRGKGEGAKIAIPVLTPDRLEKRQH  240
            RENSPAHLERLGNINPSKRGLNGEVYLT GLAPTLTRGKGEGAKIAIPVLTPDRLEKRQH
Sbjct  181  RENSPAHLERLGNINPSKRGLNGEVYLTNGLAPTLTRGKGEGAKIAIPVLTPDRLEKRQH  240

Query  241  GRRFKDNQDPMFTLTSQDRHGVVVAGNLPTSFDQTGRVFDIAGLSPTLTTMQGGDKVPKI  300
            GRR+KDNQDPMFTLTSQDRHGVVVAGNLPTSFDQTGRVFDI+GLSPTLTTMQGGDKVPKI
Sbjct  241  GRRLKDNQDPMFTLTSQDRHGVVVAGNLPTSFDQTGRVFDISGLSPTLTTMQGGDKVPKI  300

Query  301  LLREELPFLKIKEATKRGYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNMGVVV  360
            LLREELPFLKIKEATK GYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNMGVVV
Sbjct  301  LLREELPFLKIKEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNMGVVV  360

Query  361  AAMEYRQDKWYEVTGIVLDGKLYRLRIRRLTPRECFRLQGFPDWAYERAESVSSKSQLYK  420
            AA+EYRQDKWYEVTGIVL+GKLYRLRIRRLTPRECFRLQGFPDWA+++AESVSSKSQLYK
Sbjct  361  AALEYRQDKWYEVTGIVLEGKLYRLRIRRLTPRECFRLQGFPDWAFDKAESVSSKSQLYK  420

Query  421  QAGNSVTVTVieaiarefrrmeeeeKHEPTT  451
            QAGNSVTVTVIEAIA EFRR EEEEKHEPTT
Sbjct  421  QAGNSVTVTVIEAIASEFRRTEEEEKHEPTT  451

9) SSUJS14_0569 in NC_017618


> NC_009443_P1|86|G86|146320840|YP_001200551.1|Streptococcus_suis_98HAH33|-|86097..87452|-|SSU98_0993|C-5 
cytosine-specific 
DNA methylase
Length=451

 Score =  693 bits (2622),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 432/451 (96%), Positives = 442/451 (99%), Gaps = 0/451 (0%)

Query  1    MKFLDLFAGIGGFRLGMEAQGHECLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHD  60
            MKFLDLFAGIGGFRLGME+QGH CLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHD
Sbjct  1    MKFLDLFAGIGGFRLGMESQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHD  60

Query  61   FRQFRGQVEVICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL  120
            FRQFRGQV++ICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL
Sbjct  61   FRQFRGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL  120

Query  121  LNHDKGRTFATILSTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYRSRFLFPLK  180
            LNHD GRTFATILSTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYR+RFLFPL+
Sbjct  121  LNHDEGRTFATILSTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYRPRFLFPLR  180

Query  181  RENSPAHLERLGNINPSKRGLNGEVYLTTGLAPTLTRGKGEGAKIAIPVLTPDSLEKRQH  240
            RENSPAHLERLGNINPSKRGLNGEVYLT GLAPTLTRGKGEGAKIAIPVLTPD LEKRQH
Sbjct  181  RENSPAHLERLGNINPSKRGLNGEVYLTNGLAPTLTRGKGEGAKIAIPVLTPDRLEKRQH  240

Query  241  GRRFKENLDPMFTLTSQDRHGVVVAGNLLTSFDQTGRVFDISGLSPTLTTMQGGDKVPKI  300
            GRR+K+N DPMFTLTSQDRHGVVVAGNL TSFDQTGRVFDISGLSPTLTTMQGGDKVPKI
Sbjct  241  GRRLKDNQDPMFTLTSQDRHGVVVAGNLPTSFDQTGRVFDISGLSPTLTTMQGGDKVPKI  300

Query  301  LLREELPFLKIKEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNMGVVV  360
            LLREELPFLKIKEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNMGVVV
Sbjct  301  LLREELPFLKIKEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNMGVVV  360

Query  361  AALEYRQDKWYEVTGIVLEGKLYRLRIRRLTPRECFRLQGFPDWAYERAESVSSKSQLYK  420
            AALEYRQDKWYEVTGIVLEGKLYRLRIRRLTPRECFRLQGFPDWA+++AESVSSKSQLYK
Sbjct  361  AALEYRQDKWYEVTGIVLEGKLYRLRIRRLTPRECFRLQGFPDWAFDKAESVSSKSQLYK  420

Query  421  QVGNSVTVTVieaiarefrrieeeeKHEPTT  451
            Q GNSVTVTVIEAIA EFRR EEEEKHEPTT
Sbjct  421  QAGNSVTVTVIEAIASEFRRTEEEEKHEPTT  451

10) NJAUSS_0563 in NC_020526


> NC_009443_P1|86|G86|146320840|YP_001200551.1|Streptococcus_suis_98HAH33|-|86097..87452|-|SSU98_0993|C-5 
cytosine-specific 
DNA methylase
Length=451

 Score =  693 bits (2622),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 432/451 (96%), Positives = 442/451 (99%), Gaps = 0/451 (0%)

Query  1    MKFLDLFAGIGGFRLGMEAQGHECLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHD  60
            MKFLDLFAGIGGFRLGME+QGH CLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHD
Sbjct  1    MKFLDLFAGIGGFRLGMESQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHD  60

Query  61   FRQFRGQVEVICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL  120
            FRQFRGQV++ICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL
Sbjct  61   FRQFRGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL  120

Query  121  LNHDKGRTFATILSTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYRSRFLFPLK  180
            LNHD GRTFATILSTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYR+RFLFPL+
Sbjct  121  LNHDEGRTFATILSTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYRPRFLFPLR  180

Query  181  RENSPAHLERLGNINPSKRGLNGEVYLTTGLAPTLTRGKGEGAKIAIPVLTPDSLEKRQH  240
            RENSPAHLERLGNINPSKRGLNGEVYLT GLAPTLTRGKGEGAKIAIPVLTPD LEKRQH
Sbjct  181  RENSPAHLERLGNINPSKRGLNGEVYLTNGLAPTLTRGKGEGAKIAIPVLTPDRLEKRQH  240

Query  241  GRRFKENLDPMFTLTSQDRHGVVVAGNLLTSFDQTGRVFDISGLSPTLTTMQGGDKVPKI  300
            GRR+K+N DPMFTLTSQDRHGVVVAGNL TSFDQTGRVFDISGLSPTLTTMQGGDKVPKI
Sbjct  241  GRRLKDNQDPMFTLTSQDRHGVVVAGNLPTSFDQTGRVFDISGLSPTLTTMQGGDKVPKI  300

Query  301  LLREELPFLKIKEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNMGVVV  360
            LLREELPFLKIKEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNMGVVV
Sbjct  301  LLREELPFLKIKEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNMGVVV  360

Query  361  AALEYRQDKWYEVTGIVLEGKLYRLRIRRLTPRECFRLQGFPDWAYERAESVSSKSQLYK  420
            AALEYRQDKWYEVTGIVLEGKLYRLRIRRLTPRECFRLQGFPDWA+++AESVSSKSQLYK
Sbjct  361  AALEYRQDKWYEVTGIVLEGKLYRLRIRRLTPRECFRLQGFPDWAFDKAESVSSKSQLYK  420

Query  421  QVGNSVTVTVieaiarefrrieeeeKHEPTT  451
            Q GNSVTVTVIEAIA EFRR EEEEKHEPTT
Sbjct  421  QAGNSVTVTVIEAIASEFRRTEEEEKHEPTT  451

11) dcm.2 in NC_015600


> NC_009443_P1|86|G86|146320840|YP_001200551.1|Streptococcus_suis_98HAH33|-|86097..87452|-|SSU98_0993|C-5 
cytosine-specific 
DNA methylase
Length=451

 Score =  692 bits (2617),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 427/451 (95%), Positives = 444/451 (99%), Gaps = 0/451 (0%)

Query  1    MKFLDLFAGIGGFRLGMEAQGHECLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEITDHD  60
            MKFLDLFAGIGGFRLGME+QGH CLGFCEIDKFARTSYKAMFNTEGEIEYHDIKE+TDHD
Sbjct  1    MKFLDLFAGIGGFRLGMESQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHD  60

Query  61   FRQFRGQVEVICGGFPCQAFSLAGRRLGFEDTRGTLFFEITRAAKQIQPRFLFLENVKGL  120
            FRQFRGQV++ICGGFPCQAFSLAGRRLGFEDTRGTLFFEI+RAAKQIQPRFLFLENVKGL
Sbjct  61   FRQFRGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL  120

Query  121  LNHDEGRTFSTILSTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYRSRFLFPLR  180
            LNHDEGRTF+TILSTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYR+RFLFPLR
Sbjct  121  LNHDEGRTFATILSTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYRPRFLFPLR  180

Query  181  GENSPAHLERLGNINPSKHGLNGEVYLTSGLAPTLTRGKGEGVKIAIPVLTPDRLEKRQH  240
             ENSPAHLERLGNINPSK+GLNGEVYLT+GLAPTLTRGKGEG KIAIPVLTPDRLEKRQH
Sbjct  181  RENSPAHLERLGNINPSKRGLNGEVYLTNGLAPTLTRGKGEGAKIAIPVLTPDRLEKRQH  240

Query  241  GGRFKENQDPMFTLTSQDRHGVLVAGNLPTSFDQTGRVFDISGLSPTLTTMQGGDKVPKI  300
            G R+K+NQDPMFTLTSQDRHGV+VAGNLPTSFDQTGRVFDISGLSPTLTTMQGGDKVPKI
Sbjct  241  GRRLKDNQDPMFTLTSQDRHGVVVAGNLPTSFDQTGRVFDISGLSPTLTTMQGGDKVPKI  300

Query  301  LLREELPFLKIKEATKRGYAKATLGDSVNLAYPDSTKRRGRVGKGIANTLTTSDNMGVVV  360
            LLREELPFLKIKEATK GYAKATLGDSVNLAYPDSTKRRGRVGKGI+NTLTTSDNMGVVV
Sbjct  301  LLREELPFLKIKEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNMGVVV  360

Query  361  AAMEYRQDKWYEVTGIVLDGKLYRLRIRRLTPRECFRIQGFPDWAFDKAEAVSSKSQLYK  420
            AA+EYRQDKWYEVTGIVL+GKLYRLRIRRLTPRECFR+QGFPDWAFDKAE+VSSKSQLYK
Sbjct  361  AALEYRQDKWYEVTGIVLEGKLYRLRIRRLTPRECFRLQGFPDWAFDKAESVSSKSQLYK  420

Query  421  QAGNSVTVTVieaiarefrrmeeeeKHEPTT  451
            QAGNSVTVTVIEAIA EFRR EEEEKHEPTT
Sbjct  421  QAGNSVTVTVIEAIASEFRRTEEEEKHEPTT  451

12) SSU05_0979 in NC_009442


> NC_009443_P1|86|G86|146320840|YP_001200551.1|Streptococcus_suis_98HAH33|-|86097..87452|-|SSU98_0993|C-5 
cytosine-specific 
DNA methylase
Length=451

 Score =  683 bits (2581),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 436/436 (100%), Positives = 436/436 (100%), Gaps = 0/436 (0%)

Query  1    MKFLDLFAGIGGFRLGMESQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHD  60
            MKFLDLFAGIGGFRLGMESQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHD
Sbjct  1    MKFLDLFAGIGGFRLGMESQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHD  60

Query  61   FRQFRGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL  120
            FRQFRGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL
Sbjct  61   FRQFRGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL  120

Query  121  LNHDEGRTFATILSTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSrryrprflfplr  180
            LNHDEGRTFATILSTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYRPRFLFPLR
Sbjct  121  LNHDEGRTFATILSTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYRPRFLFPLR  180

Query  181  rENSPAHLERLGNINPSKRGLNGEVYLTNGLAPTLTRGKGEGAKIAIPVLTPDRLEKRQH  240
            RENSPAHLERLGNINPSKRGLNGEVYLTNGLAPTLTRGKGEGAKIAIPVLTPDRLEKRQH
Sbjct  181  RENSPAHLERLGNINPSKRGLNGEVYLTNGLAPTLTRGKGEGAKIAIPVLTPDRLEKRQH  240

Query  241  GRRLKDNQDPMFTLTSQDRHGVVVAGNLPTSFDQTGRVFDISGLSPTLTTMQGGDKVPKI  300
            GRRLKDNQDPMFTLTSQDRHGVVVAGNLPTSFDQTGRVFDISGLSPTLTTMQGGDKVPKI
Sbjct  241  GRRLKDNQDPMFTLTSQDRHGVVVAGNLPTSFDQTGRVFDISGLSPTLTTMQGGDKVPKI  300

Query  301  LLREELPFLKIKEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNMGVVV  360
            LLREELPFLKIKEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNMGVVV
Sbjct  301  LLREELPFLKIKEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNMGVVV  360

Query  361  AALEYRQDKWYEVTGIVLEGKLYRLRIRRLTPRECFRLQGFPDWAFDKAESVSSKSQLYK  420
            AALEYRQDKWYEVTGIVLEGKLYRLRIRRLTPRECFRLQGFPDWAFDKAESVSSKSQLYK
Sbjct  361  AALEYRQDKWYEVTGIVLEGKLYRLRIRRLTPRECFRLQGFPDWAFDKAESVSSKSQLYK  420

Query  421  QAGNSVTVTVIEAIAS  436
            QAGNSVTVTVIEAIAS
Sbjct  421  QAGNSVTVTVIEAIAS  436

13) SSU98_0993 in NC_009443


> NC_009443_P1|86|G86|146320840|YP_001200551.1|Streptococcus_suis_98HAH33|-|86097..87452|-|SSU98_0993|C-5 
cytosine-specific 
DNA methylase
Length=451

 Score =  683 bits (2581),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 436/436 (100%), Positives = 436/436 (100%), Gaps = 0/436 (0%)

Query  1    MKFLDLFAGIGGFRLGMESQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHD  60
            MKFLDLFAGIGGFRLGMESQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHD
Sbjct  1    MKFLDLFAGIGGFRLGMESQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHD  60

Query  61   FRQFRGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL  120
            FRQFRGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL
Sbjct  61   FRQFRGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL  120

Query  121  LNHDEGRTFATILSTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSrryrprflfplr  180
            LNHDEGRTFATILSTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYRPRFLFPLR
Sbjct  121  LNHDEGRTFATILSTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYRPRFLFPLR  180

Query  181  rENSPAHLERLGNINPSKRGLNGEVYLTNGLAPTLTRGKGEGAKIAIPVLTPDRLEKRQH  240
            RENSPAHLERLGNINPSKRGLNGEVYLTNGLAPTLTRGKGEGAKIAIPVLTPDRLEKRQH
Sbjct  181  RENSPAHLERLGNINPSKRGLNGEVYLTNGLAPTLTRGKGEGAKIAIPVLTPDRLEKRQH  240

Query  241  GRRLKDNQDPMFTLTSQDRHGVVVAGNLPTSFDQTGRVFDISGLSPTLTTMQGGDKVPKI  300
            GRRLKDNQDPMFTLTSQDRHGVVVAGNLPTSFDQTGRVFDISGLSPTLTTMQGGDKVPKI
Sbjct  241  GRRLKDNQDPMFTLTSQDRHGVVVAGNLPTSFDQTGRVFDISGLSPTLTTMQGGDKVPKI  300

Query  301  LLREELPFLKIKEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNMGVVV  360
            LLREELPFLKIKEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNMGVVV
Sbjct  301  LLREELPFLKIKEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNMGVVV  360

Query  361  AALEYRQDKWYEVTGIVLEGKLYRLRIRRLTPRECFRLQGFPDWAFDKAESVSSKSQLYK  420
            AALEYRQDKWYEVTGIVLEGKLYRLRIRRLTPRECFRLQGFPDWAFDKAESVSSKSQLYK
Sbjct  361  AALEYRQDKWYEVTGIVLEGKLYRLRIRRLTPRECFRLQGFPDWAFDKAESVSSKSQLYK  420

Query  421  QAGNSVTVTVIEAIAS  436
            QAGNSVTVTVIEAIAS
Sbjct  421  QAGNSVTVTVIEAIAS  436

14) SSUBM407_0935 in NC_012926


> NC_009443_P1|86|G86|146320840|YP_001200551.1|Streptococcus_suis_98HAH33|-|86097..87452|-|SSU98_0993|C-5 
cytosine-specific 
DNA methylase
Length=451

 Score =  683 bits (2581),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 436/436 (100%), Positives = 436/436 (100%), Gaps = 0/436 (0%)

Query  1    MKFLDLFAGIGGFRLGMESQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHD  60
            MKFLDLFAGIGGFRLGMESQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHD
Sbjct  1    MKFLDLFAGIGGFRLGMESQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHD  60

Query  61   FRQFRGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL  120
            FRQFRGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL
Sbjct  61   FRQFRGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL  120

Query  121  LNHDEGRTFATILSTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSrryrprflfplr  180
            LNHDEGRTFATILSTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYRPRFLFPLR
Sbjct  121  LNHDEGRTFATILSTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYRPRFLFPLR  180

Query  181  rENSPAHLERLGNINPSKRGLNGEVYLTNGLAPTLTRGKGEGAKIAIPVLTPDRLEKRQH  240
            RENSPAHLERLGNINPSKRGLNGEVYLTNGLAPTLTRGKGEGAKIAIPVLTPDRLEKRQH
Sbjct  181  RENSPAHLERLGNINPSKRGLNGEVYLTNGLAPTLTRGKGEGAKIAIPVLTPDRLEKRQH  240

Query  241  GRRLKDNQDPMFTLTSQDRHGVVVAGNLPTSFDQTGRVFDISGLSPTLTTMQGGDKVPKI  300
            GRRLKDNQDPMFTLTSQDRHGVVVAGNLPTSFDQTGRVFDISGLSPTLTTMQGGDKVPKI
Sbjct  241  GRRLKDNQDPMFTLTSQDRHGVVVAGNLPTSFDQTGRVFDISGLSPTLTTMQGGDKVPKI  300

Query  301  LLREELPFLKIKEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNMGVVV  360
            LLREELPFLKIKEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNMGVVV
Sbjct  301  LLREELPFLKIKEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNMGVVV  360

Query  361  AALEYRQDKWYEVTGIVLEGKLYRLRIRRLTPRECFRLQGFPDWAFDKAESVSSKSQLYK  420
            AALEYRQDKWYEVTGIVLEGKLYRLRIRRLTPRECFRLQGFPDWAFDKAESVSSKSQLYK
Sbjct  361  AALEYRQDKWYEVTGIVLEGKLYRLRIRRLTPRECFRLQGFPDWAFDKAESVSSKSQLYK  420

Query  421  QAGNSVTVTVIEAIAS  436
            QAGNSVTVTVIEAIAS
Sbjct  421  QAGNSVTVTVIEAIAS  436

15) SSUSC84_0887 in NC_012924


> NC_009443_P1|86|G86|146320840|YP_001200551.1|Streptococcus_suis_98HAH33|-|86097..87452|-|SSU98_0993|C-5 
cytosine-specific 
DNA methylase
Length=451

 Score =  683 bits (2581),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 436/436 (100%), Positives = 436/436 (100%), Gaps = 0/436 (0%)

Query  1    MKFLDLFAGIGGFRLGMESQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHD  60
            MKFLDLFAGIGGFRLGMESQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHD
Sbjct  1    MKFLDLFAGIGGFRLGMESQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHD  60

Query  61   FRQFRGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL  120
            FRQFRGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL
Sbjct  61   FRQFRGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL  120

Query  121  LNHDEGRTFATILSTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSrryrprflfplr  180
            LNHDEGRTFATILSTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYRPRFLFPLR
Sbjct  121  LNHDEGRTFATILSTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYRPRFLFPLR  180

Query  181  rENSPAHLERLGNINPSKRGLNGEVYLTNGLAPTLTRGKGEGAKIAIPVLTPDRLEKRQH  240
            RENSPAHLERLGNINPSKRGLNGEVYLTNGLAPTLTRGKGEGAKIAIPVLTPDRLEKRQH
Sbjct  181  RENSPAHLERLGNINPSKRGLNGEVYLTNGLAPTLTRGKGEGAKIAIPVLTPDRLEKRQH  240

Query  241  GRRLKDNQDPMFTLTSQDRHGVVVAGNLPTSFDQTGRVFDISGLSPTLTTMQGGDKVPKI  300
            GRRLKDNQDPMFTLTSQDRHGVVVAGNLPTSFDQTGRVFDISGLSPTLTTMQGGDKVPKI
Sbjct  241  GRRLKDNQDPMFTLTSQDRHGVVVAGNLPTSFDQTGRVFDISGLSPTLTTMQGGDKVPKI  300

Query  301  LLREELPFLKIKEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNMGVVV  360
            LLREELPFLKIKEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNMGVVV
Sbjct  301  LLREELPFLKIKEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNMGVVV  360

Query  361  AALEYRQDKWYEVTGIVLEGKLYRLRIRRLTPRECFRLQGFPDWAFDKAESVSSKSQLYK  420
            AALEYRQDKWYEVTGIVLEGKLYRLRIRRLTPRECFRLQGFPDWAFDKAESVSSKSQLYK
Sbjct  361  AALEYRQDKWYEVTGIVLEGKLYRLRIRRLTPRECFRLQGFPDWAFDKAESVSSKSQLYK  420

Query  421  QAGNSVTVTVIEAIAS  436
            QAGNSVTVTVIEAIAS
Sbjct  421  QAGNSVTVTVIEAIAS  436

16) SANR_1206 in NC_022239


> NC_009443_P1|86|G86|146320840|YP_001200551.1|Streptococcus_suis_98HAH33|-|86097..87452|-|SSU98_0993|C-5 
cytosine-specific 
DNA methylase
Length=451

 Score =  627 bits (2369),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 389/451 (87%), Positives = 429/451 (96%), Gaps = 1/451 (0%)

Query  1    MKFLDLFAGIGGFRLGLERQGHECVGFCEIDKFARKSYKAMYETEGEIEFHDIRQVTDQN  60
            MKFLDLFAGIGGFRLG+E QGH C+GFCEIDKFAR SYKAM++TEGEIE+HDI++VTD++
Sbjct  1    MKFLDLFAGIGGFRLGMESQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHD  60

Query  61   FRQLRGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL  120
            FRQ+RGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL
Sbjct  61   FRQFRGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL  120

Query  121  LNHDTGETFRTILATLDELGYDVEWQILNSKDFQVPQNRERVFIIGHsrryrprfllplr  180
            LNHD G TF TIL+TLDELGYDVEWQ+LNSKDFQVPQNRERVFIIGHSRRYRPRFL+PLR
Sbjct  121  LNHDEGRTFATILSTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYRPRFLFPLR  180

Query  181  resspTGLERLGNVNPSGKGMSGEVYLSHGLSPTLTRGKGEGAKIAISVLTPDRLKKRQH  240
            RE+SP+ LERLGN+NPS +G++GEVYL++GL+PTLTRGKGEGAKIAI+VLTPDRL KRQH
Sbjct  181  RENSPAHLERLGNINPSKRGLNGEVYLTNGLAPTLTRGKGEGAKIAIPVLTPDRLEKRQH  240

Query  241  GRRFKDNQAPMFTLTAQDRHGVVVAGTLPTSFVQTGRIYDISGVSPTLTTMQGGDKVPKI  300
            GRR+KDNQ PMFTLT+QDRHGVVVAG LPTSF QTGR++DISG+SPTLTTMQGGDKVPKI
Sbjct  241  GRRLKDNQDPMFTLTSQDRHGVVVAGNLPTSFDQTGRVFDISGLSPTLTTMQGGDKVPKI  300

Query  301  LCREEAPHLKIKEATKLGYVKATIGDSVNLAYPESTKRRGRVGKGVSNTITTSDNMGVVV  360
            L REE P LKIKEATK GY KAT+GDSVNLAYP+STKRRGRVGKG+SNT+TTSDNMGVVV
Sbjct  301  LLREELPFLKIKEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNMGVVV  360

Query  361  AALEYRKDKWYEVTGIVIDGKLYRLRIRRLTPRECFRLQGFPDWAYERAESVSSKSQLYK  420
            AALEYR+DKWYEVTGIV++GKLYRLRIRRLTPRECFRLQGFPDWA+++AESVSSKSQLYK
Sbjct  361  AALEYRQDKWYEVTGIVLEGKLYRLRIRRLTPRECFRLQGFPDWAFDKAESVSSKSQLYK  420

Query  421  QAGNSVTVTVIEAIAGAFRKIEEEE-HEVVT  450
            QAGNSVTVTVIEAIA+ FR+ EEEE HE  T
Sbjct  421  QAGNSVTVTVIEAIASEFRRTEEEEKHEPTT  451

17) SZO_17990 in NC_012470


> NC_009443_P1|86|G86|146320840|YP_001200551.1|Streptococcus_suis_98HAH33|-|86097..87452|-|SSU98_0993|C-5 
cytosine-specific 
DNA methylase
Length=451

 Score =  616 bits (2329),  Expect = 7e-178, Method: Compositional matrix adjust.
 Identities = 381/439 (87%), Positives = 415/439 (95%), Gaps = 0/439 (0%)

Query  1    MKFLDLFAGIGGFRLGLTRQGHKCIGFCEIDKFARKSYKAIYETKGEIEFHDIRQVTDQD  60
            MKFLDLFAGIGGFRLG+  QGHKC+GFCEIDKFAR SYKA+++T GEIE+HDI++VTD+D
Sbjct  1    MKFLDLFAGIGGFRLGMESQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHD  60

Query  61   FRQLRGQMDIICGGFPCQAFSLAGRRLGFEDTRGTWFFEIARAAKQIQPRFLFLENVKGL  120
            FRQ+RGQ+DIICGGFPCQAFSLAGRRLGFEDTRGT FFEIARAAKQIQPRFLFLENVKGL
Sbjct  61   FRQFRGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL  120

Query  121  LSHDKGETFRTILTTLDELGYDVEWQVLNSKDFQVPQNRERIFIIGHSrryrprflfplr  180
            L+HD G TF TIL+TLDELGYDVEWQVLNSKDFQVPQNRER+FIIGHSRRYRPRFLFPLR
Sbjct  121  LNHDEGRTFATILSTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYRPRFLFPLR  180

Query  181  GENSSAGLERLGNVNPSGKGMNGEVYLSRGIAPTLTRGKGEGTKIAIPVLTPDRLEKRQH  240
             ENS+A LERLGN+NPS +G+NGEVYL+ G+APTLTRGKGEG+KIAIPVLTPDRLEKRQH
Sbjct  181  RENSPAHLERLGNINPSKRGLNGEVYLTNGLAPTLTRGKGEGAKIAIPVLTPDRLEKRQH  240

Query  241  GRRFKDNQDPMFTLTGQDRHGVVVAGTLPTSFIQTGRVYDLSGLSPTLTTMQGGDKVPKI  300
            GRR+KDNQDPMFTLT+QDRHGVVVAG LPTSF QTGRV+D+SGLSPTLTTMQGGDKVPKI
Sbjct  241  GRRLKDNQDPMFTLTSQDRHGVVVAGNLPTSFDQTGRVFDISGLSPTLTTMQGGDKVPKI  300

Query  301  LCREEAPHLKIREATKLGYVKAIVGDSVNLAYPESTKRRGRVGKGISNTLITSDNMGVVV  360
            L REE P LKI+EATK GY KA +GDSVNLAYP+STKRRGRVGKGISNTL TSDNMGVVV
Sbjct  301  LLREELPFLKIKEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNMGVVV  360

Query  361  AALEYRKDKWYEVTGIILDGKLYRLRIRRLTPRECFRLQGFPDWAYERAERVSSKSQLYK  420
            AALEYR+DKWYEVTGI+L+GKLYRLRIRRLTPRECFRLQGFPDWA+++AE VSSKSQLYK
Sbjct  361  AALEYRQDKWYEVTGIVLEGKLYRLRIRRLTPRECFRLQGFPDWAFDKAESVSSKSQLYK  420

Query  421  QAGNSVTVTVIEAIAKVFR  439
            QAGNSVTVTVIEAIA  FR
Sbjct  421  QAGNSVTVTVIEAIASEFR  439

18) gbs1370 in NC_004368


> NC_009443_P1|86|G86|146320840|YP_001200551.1|Streptococcus_suis_98HAH33|-|86097..87452|-|SSU98_0993|C-5 
cytosine-specific 
DNA methylase
Length=451

 Score =  615 bits (2325),  Expect = 1e-177, Method: Compositional matrix adjust.
 Identities = 373/430 (87%), Positives = 415/430 (97%), Gaps = 0/430 (0%)

Query  1    MKFLDLFAGIGGFRLGLESQGHECLGFCEIDKFARKSYKAIFETEGEVEFHDIRQVTDQD  60
            MKFLDLFAGIGGFRLG+ESQGH CLGFCEIDKFAR SYKA+F+TEGE+E+HDI++VTD+D
Sbjct  1    MKFLDLFAGIGGFRLGMESQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHD  60

Query  61   FRKFRGQVDIICVGFPCQAFSLAGRRLGFEDTRGTLFFELARAAQQIQPRFLFLENVKGL  120
            FR+FRGQVDIIC GFPCQAFSLAGRRLGFEDTRGTLFFE+ARAA+QIQPRFLFLENVKGL
Sbjct  61   FRQFRGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL  120

Query  121  LSHDKGATFRTILTTLDELGYDVEWQVLNSKDFQVPQNRERVFLIGHSrryrprflfplr  180
            L+HD G TF TIL+TLDELGYDVEWQVLNSKDFQVPQNRERVF+IGHSRRYRPRFLFPLR
Sbjct  121  LNHDEGRTFATILSTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYRPRFLFPLR  180

Query  181  rEGSPTDIERLGNINPSKHGMSGQVYLTSGLAPTLTRGKGEGTKIAVPVLTPDRLEKRQN  240
            RE SP+++ERLGNINPSK+G++G+VYLT+GLAPTLTRGKGEG+KIA+PVLTPDRLEKRQ+
Sbjct  181  RENSPAHLERLGNINPSKRGLNGEVYLTNGLAPTLTRGKGEGAKIAIPVLTPDRLEKRQH  240

Query  241  GRRFKDNQDTMFTLTAQDKHGVVVAGNLPTAFVQTGRVYDISGISPTITTMQGGDKVPKI  300
            GRR+KDNQD MFTLT+QD+HGVVVAGNLPT+F QTGRV+DISG+SPT+TTMQGGDKVPKI
Sbjct  241  GRRLKDNQDPMFTLTSQDRHGVVVAGNLPTSFDQTGRVFDISGLSPTLTTMQGGDKVPKI  300

Query  301  LLRETLPHLKIKEATKTGFAKATLGDSVNLAYPKSNSHRGRVGQGISNTLTTSGNMGVVV  360
            LLRE LP LKIKEATKTG+AKATLGDSVNLAYP S  +RGRVG+GISNTLTTS+NMGVVV
Sbjct  301  LLREELPFLKIKEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNMGVVV  360

Query  361  AALEYRKDKWYEVTGIVLDGKLYRLRIRRLTPRECFRLQGFPDWAYERAEAVSSKSQLYK  420
            AALEYR+DKWYEVTGIVL+GKLYRLRIRRLTPRECFRLQGFPDWA+++AE+VSSKSQLYK
Sbjct  361  AALEYRQDKWYEVTGIVLEGKLYRLRIRRLTPRECFRLQGFPDWAFDKAESVSSKSQLYK  420

Query  421  QAGNSVTVNV  430
            QAGNSVTV V
Sbjct  421  QAGNSVTVTV  430

19) SMA_1430 in NC_016749


> NC_009443_P1|86|G86|146320840|YP_001200551.1|Streptococcus_suis_98HAH33|-|86097..87452|-|SSU98_0993|C-5 
cytosine-specific 
DNA methylase
Length=451

 Score =  613 bits (2317),  Expect = 6e-177, Method: Compositional matrix adjust.
 Identities = 379/430 (89%), Positives = 412/430 (96%), Gaps = 0/430 (0%)

Query  1    MKFLDLFAGIGGFRLGLTRQGHECIGFCEIDKFARKSYQAIYDTEGEIEFHDIRQVTDQD  60
            MKFLDLFAGIGGFRLG+  QGH C+GFCEIDKFAR SY+A+++TEGEIE+HDI++VTD+D
Sbjct  1    MKFLDLFAGIGGFRLGMESQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHD  60

Query  61   FRQLRGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL  120
            FRQ+RGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL
Sbjct  61   FRQFRGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL  120

Query  121  LSHDKGRTFRTILTTLDELGYDVEWQVLNSKDFQVPQNRERIFIIGHSrryrprflfplr  180
            L+HD GRTF TIL+TLDELGYDVEWQVLNSKDFQVPQNRER+FIIGHSRRYRPRFLFPLR
Sbjct  121  LNHDEGRTFATILSTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYRPRFLFPLR  180

Query  181  GENSSASLERLGNVNPSGKGMNGEVYLSRGIAPTLTRGKGEGTKIAIPVLTPDRLEKRQH  240
             ENS+A LERLGN+NPS +G+NGEVYL+ G+APTLTRGKGEG+KIAIPVLTPDRLEKRQH
Sbjct  181  RENSPAHLERLGNINPSKRGLNGEVYLTNGLAPTLTRGKGEGAKIAIPVLTPDRLEKRQH  240

Query  241  GRRFKGNDDPMFTLTSQDRHGVVVAGTLPTSFIQTGRVYDLSGLSPTLTTMQGGDKVPKI  300
            GRR+K+N+DPMFTLTSQDRHGVVVAG LPTSF QTGRV+D+SGLSPTLTTMQGGDKVPKI
Sbjct  241  GRRLKDNQDPMFTLTSQDRHGVVVAGNLPTSFDQTGRVFDISGLSPTLTTMQGGDKVPKI  300

Query  301  LCREEAPHLKIREATKLGYAKAIVGDSVNLAYPESTKRRGRVGKGISNTLTTSDNMGVVV  360
            L REE P LKI+EATK GYAKA +GDSVNLAYP+STKRRGRVGKGISNTLTTSDNMGVVV
Sbjct  301  LLREELPFLKIKEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNMGVVV  360

Query  361  AALEYRKDKWYEVTGIILEGKLYRLRIRRLTPRECFRLQGFPDWAYDRAERVSSKSQLYK  420
            AALEYR+DKWYEVTGI+LEGKLYRLRIRRLTPRECFRLQGFPDWA+D+AE VSSKSQLYK
Sbjct  361  AALEYRQDKWYEVTGIVLEGKLYRLRIRRLTPRECFRLQGFPDWAFDKAESVSSKSQLYK  420

Query  421  QAGNSVTVTV  430
            QAGNSVTVTV
Sbjct  421  QAGNSVTVTV  430

20) STH8232_0659 in NC_017581


> NC_009443_P1|86|G86|146320840|YP_001200551.1|Streptococcus_suis_98HAH33|-|86097..87452|-|SSU98_0993|C-5 
cytosine-specific 
DNA methylase
Length=451

 Score =  589 bits (2224),  Expect = 1e-169, Method: Compositional matrix adjust.
 Identities = 355/368 (97%), Positives = 367/368 (99%), Gaps = 0/368 (0%)

Query  1    MDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGLLNHDKGR  60
            +DIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGLLNHD GR
Sbjct  68   VDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGLLNHDEGR  127

Query  61   TFSTILTTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYRSRFIFPLRRENSSAH  120
            TF+TIL+TLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYR+RF+FPLRRENS+AH
Sbjct  128  TFATILSTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYRPRFLFPLRRENSPAH  187

Query  121  LERLGNINPSKRGLNGEVYLTSGLAPTLTRGKGEGAKIAIPVLTPDRLEKRQHGRRIKDN  180
            LERLGNINPSKRGLNGEVYLT+GLAPTLTRGKGEGAKIAIPVLTPDRLEKRQHGRR+KDN
Sbjct  188  LERLGNINPSKRGLNGEVYLTNGLAPTLTRGKGEGAKIAIPVLTPDRLEKRQHGRRLKDN  247

Query  181  QDPMFTLTSQDRHGVVVAGNLPTSFDQTGRVFDISGLSPTLTTMQGGDKVPKILLREELP  240
            QDPMFTLTSQDRHGVVVAGNLPTSFDQTGRVFDISGLSPTLTTMQGGDKVPKILLREELP
Sbjct  248  QDPMFTLTSQDRHGVVVAGNLPTSFDQTGRVFDISGLSPTLTTMQGGDKVPKILLREELP  307

Query  241  FLKIKEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNMGVVVAALEYRQ  300
            FLKIKEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNMGVVVAALEYRQ
Sbjct  308  FLKIKEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNMGVVVAALEYRQ  367

Query  301  DKWYEVTGIVLEGKLYRLRIRRLTPRECFRLQGFPDWAYERAEGVSSKSQLYKQAGNSVT  360
            DKWYEVTGIVLEGKLYRLRIRRLTPRECFRLQGFPDWA+++AE+VSSKSQLYKQAGNSVT
Sbjct  368  DKWYEVTGIVLEGKLYRLRIRRLTPRECFRLQGFPDWAFDKAESVSSKSQLYKQAGNSVT  427

Query  361  VTVIEAIA  368
            VTVIEAIA
Sbjct  428  VTVIEAIA  435

21) HMPREF1038_01337 in NC_018630


> NC_009443_P1|86|G86|146320840|YP_001200551.1|Streptococcus_suis_98HAH33|-|86097..87452|-|SSU98_0993|C-5 
cytosine-specific 
DNA methylase
Length=451

 Score =  569 bits (2150),  Expect = 1e-163, Method: Compositional matrix adjust.
 Identities = 326/433 (76%), Positives = 388/433 (90%), Gaps = 3/433 (0%)

Query  1    MRFIDLFSGIGGFRLGMESVGHECIGFCEIDKFARESYKSIFQTEGEIEYHDIKEVTDHD  60
            M+F+DLF+GIGGFRLGMES GH C+GFCEIDKFAR SYK++F+TEGEIEYHDIKEVTDHD
Sbjct  1    MKFLDLFAGIGGFRLGMESQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHD  60

Query  61   FRQFRGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL  120
            FRQFRGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL
Sbjct  61   FRQFRGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL  120

Query  121  LNHDKGRTFTTILTTFDELGFDVEWQVLNSKDFGVPQNRERVFIIGHSRKKGTRLLFPFR  180
            LNHD GRTF+TIL+T+DELG+DVEWQVLNSKDF VPQNRERVFIIGHSR+   R+LFP+R
Sbjct  121  LNHDEGRTFATILSTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYRPRFLFPLR  180

Query  181  REGQATNSETLKALGNLNPSKSGVSGKVYYSEGLAPTLVRGKGEGFKVAIPCMTPDRLDK  240
            RE  +++   L  LGN+NPSK G++G VY ++GLAPTL RGKGEG K+AIP +TPDRL+K
Sbjct  181  RENSPAH---LERLGNINPSKRGLNGEVYLTNGLAPTLTRGKGEGAKIAIPVLTPDRLEK  237

Query  241  RQNGRRFKENQEPMFTLNTQDRHGIVVVGDLPTSFKETGRVYGSEGLSPTLTTMQGGDKI  300
            RQ+GRR+K+NQ+PMFTL +QDRHG+VV G+LPTSF +TGRV++  GLSPTLTTMQGGDK+
Sbjct  238  RQHGRRLKDNQDPMFTLTSQDRHGVVVAGNLPTSFDQTGRVFDISGLSPTLTTMQGGDKV  297

Query  301  PKILIPEPIQFLKVREATKKGYAQAEIGDSINLERPSSQYRRGRVGKGIANTLTTSGQMG  360
            PKIL+ E + FLK++EATK GYA+A +GDS+NL  P S  RRGRVGKGI+NTLTTS++MG
Sbjct  298  PKILLREELPFLKIKEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNMG  357

Query  361  VVVASYEGEDKQVYQVAGVLIDGQFYRLRIRRITPKECFRLHGFPDWAFEAARKVSSNSQ  420
            VVVA+ E  + + Y+V+G++++G++YRLRIRR+TP+ECFRL+GFPDWAF+ A  VSS+SQ
Sbjct  358  VVVAALEYRQDKWYEVTGIVLEGKLYRLRIRRLTPRECFRLQGFPDWAFDKAESVSSKSQ  417

Query  421  LYKQAGNSVTVPV  433
            LYKQAGNSVTV V
Sbjct  418  LYKQAGNSVTVTV  430

22) SPH_1233 in NC_010380


> NC_009443_P1|86|G86|146320840|YP_001200551.1|Streptococcus_suis_98HAH33|-|86097..87452|-|SSU98_0993|C-5 
cytosine-specific 
DNA methylase
Length=451

 Score =  567 bits (2141),  Expect = 5e-163, Method: Compositional matrix adjust.
 Identities = 320/448 (72%), Positives = 398/448 (89%), Gaps = 3/448 (0%)

Query  1    MRFIDLFSGIGGFRLGMESVGHECIGFCEIDKFARESYKSIFQTEGEIEFHDIRDVSDDE  60
            M+F+DLF+GIGGFRLGMES GH C+GFCEIDKFAR SYK++F+TEGEIE+HDI++V+D++
Sbjct  1    MKFLDLFAGIGGFRLGMESQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHD  60

Query  61   FKKLRGKVDVICGGFPCQAFSIAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL  120
            F+++RG+VD+ICGGFPCQAFS+AGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL
Sbjct  61   FRQFRGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL  120

Query  121  LNHDKGRTFTTILTTLDELGFDVEWQVLNSKDFGVPQNRERVFIIGHSRKKGTRLLFPFR  180
            LNHD GRTF+TIL+TLDELG+DVEWQVLNSKDF VPQNRERVFIIGHSR+   R+LFP+R
Sbjct  121  LNHDEGRTFATILSTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYRPRFLFPLR  180

Query  181  REGQATNSETLKILGNLNPSKSGMSGKVYYSEGLAPTLVRSKGEGFKVAIPCMTPDRLDK  240
            RE  +++   L  LGN+NPSK G++G VY ++GLAPTL R+KGEG K+AIP +TPDRL+K
Sbjct  181  RENSPAH---LERLGNINPSKRGLNGEVYLTNGLAPTLTRGKGEGAKIAIPVLTPDRLEK  237

Query  241  RQNSRRFKENQGPMFTLNTQDRHGIVVVGDLPTSFKETGRVYGSEGLSPTLTTMQGGDKI  300
            RQ++RR+K+NQ+PMFTL +QDRHG+VV G+LPTSF +TGRV++  GLSPTLTTMQGGDK+
Sbjct  238  RQHGRRLKDNQDPMFTLTSQDRHGVVVAGNLPTSFDQTGRVFDISGLSPTLTTMQGGDKV  297

Query  301  PKILIPEPIQFLKVREATKKGYAQAEIGDSINLERPSSQYRRGRVGKGIANTLTTSGQMG  360
            PKIL+ E + FLK++EATK GYA+A +GDS+NL  P S  RRGRVGKGI+NTLTTS++MG
Sbjct  298  PKILLREELPFLKIKEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNMG  357

Query  361  VVVASYEGEDKQVYHVAGVLIDGQFYRLRIRRITPKECFRLQGFPDWAFEAARKVSSNSQ  420
            VVVA+ E  + + Y+V+G++++G++YRLRIRR+TP+ECFRLQGFPDWAF+ A  VSS+SQ
Sbjct  358  VVVAALEYRQDKWYEVTGIVLEGKLYRLRIRRLTPRECFRLQGFPDWAFDKAESVSSKSQ  417

Query  421  LYKQAGNSVTVPVIAAIANKLKEIEEKD  448
            LYKQAGNSVTV VI AIA+ ++  EE +
Sbjct  418  LYKQAGNSVTVTVIEAIASEFRRTEEEE  445

23) smi_0787 in NC_013853


> NC_009443_P1|86|G86|146320840|YP_001200551.1|Streptococcus_suis_98HAH33|-|86097..87452|-|SSU98_0993|C-5 
cytosine-specific 
DNA methylase
Length=451

 Score =  559 bits (2111),  Expect = 1e-160, Method: Compositional matrix adjust.
 Identities = 318/433 (74%), Positives = 388/433 (90%), Gaps = 3/433 (0%)

Query  1    MRFIDLFSGIGGFRLGMESVGHECIGFCEIDKFARKSYKSIFQTEGEIEFHDIRDVSDDE  60
            M+F+DLF+GIGGFRLGMES GH C+GFCEIDKFAR SYK++F+TEGEIE+HDI++V+D++
Sbjct  1    MKFLDLFAGIGGFRLGMESQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHD  60

Query  61   FKKLRGKVDVICGGFPCQAFSIAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL  120
            F+++RG+VD+ICGGFPCQAFS+AGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL
Sbjct  61   FRQFRGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL  120

Query  121  LNHDKGRTFTTILTTLDELGFDVEWQVLNSKDFGVPQNRERVFIIGHSRKRGTRLLFPFR  180
            LNHD GRTF+TIL+TLDELG+DVEWQVLNSKDF VPQNRERVFIIGHSR+   R+LFP+R
Sbjct  121  LNHDEGRTFATILSTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYRPRFLFPLR  180

Query  181  REGQATNSETLKILGNLNPSKSGMSGKVYYSEGLAPTLVRGKGEGFKVAIPCMTPDRLEK  240
            RE  +++   L  LGN+NPSK G++G VY ++GLAPTL RGKGEG K+AIP +TPDRLEK
Sbjct  181  RENSPAH---LERLGNINPSKRGLNGEVYLTNGLAPTLTRGKGEGAKIAIPVLTPDRLEK  237

Query  241  RQNGRRFKDNQEPMFTLNTQDRHGIVVVGDLPTSFKETGRVYGSEGLSPTLTTMQGGDKI  300
            RQ+GRR+KDNQ+PMFTL +QDRHG+VV G+LPTSF +TGRV++  GLSPTLTTMQGGDK+
Sbjct  238  RQHGRRLKDNQDPMFTLTSQDRHGVVVAGNLPTSFDQTGRVFDISGLSPTLTTMQGGDKV  297

Query  301  PKILIPEPIQFLKVREATKKGYAQAEIGDSINLERPSSQYRRGRVGKGIANTLTTSGQMG  360
            PKIL+ E + FLK++EATK GYA+A +GDS+NL  P S  RRGRVGKGI+NTLTTS++MG
Sbjct  298  PKILLREELPFLKIKEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNMG  357

Query  361  VVVASYEGEDKQVYHVAGVLIDGQFYRLRIRRITPKECFRLQGFPDWAFEAARKVSSNSQ  420
            VVVA+ E  + + Y+V+G++++G++YRLRIRR+TP+ECFRLQGFPDWAF+ A  VSS+SQ
Sbjct  358  VVVAALEYRQDKWYEVTGIVLEGKLYRLRIRRLTPRECFRLQGFPDWAFDKAESVSSKSQ  417

Query  421  LYKQAGNSVTVPV  433
            LYKQAGNSVTV V
Sbjct  418  LYKQAGNSVTVTV  430

24) SPP_1145 in NC_012467


> NC_009443_P1|86|G86|146320840|YP_001200551.1|Streptococcus_suis_98HAH33|-|86097..87452|-|SSU98_0993|C-5 
cytosine-specific 
DNA methylase
Length=451

 Score =  559 bits (2109),  Expect = 2e-160, Method: Compositional matrix adjust.
 Identities = 316/433 (73%), Positives = 386/433 (90%), Gaps = 3/433 (0%)

Query  1    MRFIDLFSGIGGFRLGMESVGHECIGFCEIDKFARKSYKSIFQTEGEIEFHDIRDVSDAE  60
            M+F+DLF+GIGGFRLGMES GH C+GFCEIDKFAR SYK++F+TEGEIE+HDI++V+D +
Sbjct  1    MKFLDLFAGIGGFRLGMESQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHD  60

Query  61   FKKLRGKVDIICGGFPCQAFSIAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL  120
            F+++RG+VDIICGGFPCQAFS+AGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL
Sbjct  61   FRQFRGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL  120

Query  121  LNHDKGRTFTTILTTLDELGFDVEWQLLNSKDFGVPQNRERVFIIGHSRKRGTRLLFPFR  180
            LNHD GRTF+TIL+TLDELG+DVEWQ+LNSKDF VPQNRERVFIIGHSR+   R+LFP+R
Sbjct  121  LNHDEGRTFATILSTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYRPRFLFPLR  180

Query  181  REGQTTNSETLKTLGNLNPSKSGMSGKVYYSEGLAPTLVRGKGEGFKVAIPCMTPDRLDK  240
            RE   ++   L  LGN+NPSK G++G VY ++GLAPTL RGKGEG K+AIP +TPDRL+K
Sbjct  181  RENSPAH---LERLGNINPSKRGLNGEVYLTNGLAPTLTRGKGEGAKIAIPVLTPDRLEK  237

Query  241  RQNGRRFKENQEPMFTLNTQDRHGIVVVGDLPTSFKETGRVYGSEGLSPTLTTMQGGDKI  300
            RQ+GRR+K+NQ+PMFTL +QDRHG+VV G+LPTSF +TGRV++  GLSPTLTTMQGGDK+
Sbjct  238  RQHGRRLKDNQDPMFTLTSQDRHGVVVAGNLPTSFDQTGRVFDISGLSPTLTTMQGGDKV  297

Query  301  PKILIPEPIQFLKVREATKKGYAQAEIGDSINLERPSSQYRRGRVGKGIANTLTTSGQMG  360
            PKIL+ E + FLK++EATK GYA+A +GDS+NL  P S  RRGRVGKGI+NTLTTS++MG
Sbjct  298  PKILLREELPFLKIKEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNMG  357

Query  361  VVVASYEGEDKQVYHVAGVLIDGQFYRLRIRRITPKECFRLQGFPDWAFEAARKVSSNSQ  420
            VVVA+ E  + + Y+V+G++++G++YRLRIRR+TP+ECFRLQGFPDWAF+ A  VSS+SQ
Sbjct  358  VVVAALEYRQDKWYEVTGIVLEGKLYRLRIRRLTPRECFRLQGFPDWAFDKAESVSSKSQ  417

Query  421  LYKQAGNSVTVPV  433
            LYKQAGNSVTV V
Sbjct  418  LYKQAGNSVTVTV  430

25) SPN23F_13150 in NC_011900


> NC_009443_P1|86|G86|146320840|YP_001200551.1|Streptococcus_suis_98HAH33|-|86097..87452|-|SSU98_0993|C-5 
cytosine-specific 
DNA methylase
Length=451

 Score =  558 bits (2108),  Expect = 2e-160, Method: Compositional matrix adjust.
 Identities = 318/433 (74%), Positives = 387/433 (90%), Gaps = 3/433 (0%)

Query  1    MRFIDLFSGIGGFRLGMESVGHECIGFCEIDKFARESYKSIFQTEGEIEFHDIRDVSDDE  60
            M+F+DLF+GIGGFRLGMES GH C+GFCEIDKFAR SYK++F+TEGEIE+HDI++V+D++
Sbjct  1    MKFLDLFAGIGGFRLGMESQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHD  60

Query  61   FKKLRGKVDIICGGFPCQAFSIAGRRLGFEDIRGTLFFEIARAAKQIQPRFLFLENVKGL  120
            F+++RG+VDIICGGFPCQAFS+AGRRLGFED RGTLFFEIARAAKQIQPRFLFLENVKGL
Sbjct  61   FRQFRGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL  120

Query  121  LNHDKGRTFTTILTTLDELGFDVEWQVLNSKDFGVPQNRERVFIIGHSRKKGIRLLFPFR  180
            LNHD GRTF+TIL+TLDELG+DVEWQVLNSKDF VPQNRERVFIIGHSR+   R+LFP+R
Sbjct  121  LNHDEGRTFATILSTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYRPRFLFPLR  180

Query  181  REGQATNSETLKTLGNLNPSKSGMSGKVYYSEGLAPTLVRGKGEGFKIAIPCMTPDRLDK  240
            RE  +++   L  LGN+NPSK G++G VY ++GLAPTL RGKGEG KIAIP +TPDRL+K
Sbjct  181  RENSPAH---LERLGNINPSKRGLNGEVYLTNGLAPTLTRGKGEGAKIAIPVLTPDRLEK  237

Query  241  RQNGRRFKENQEPMFTLNTQDRHGIVVVGDLPTSFKETGRVYGSEGLSPTLTTMQGGDKI  300
            RQ+GRR+K+NQ+PMFTL +QDRHG+VV G+LPTSF +TGRV++  GLSPTLTTMQGGDK+
Sbjct  238  RQHGRRLKDNQDPMFTLTSQDRHGVVVAGNLPTSFDQTGRVFDISGLSPTLTTMQGGDKV  297

Query  301  PKILIPEPIQFLKVREATKKGYAQAEIGDSINLERPSSQYRRGRVGKGIANTLTTSGQMG  360
            PKIL+ E + FLK++EATK GYA+A +GDS+NL  P S  RRGRVGKGI+NTLTTS++MG
Sbjct  298  PKILLREELPFLKIKEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNMG  357

Query  361  VVVASYEGEDKQVYHVAGILIDGQFYRLRIRRITPKECFRLQGFPDWAFEAARRVSSNSQ  420
            VVVA+ E  + + Y+V+GI+++G++YRLRIRR+TP+ECFRLQGFPDWAF+ A  VSS+SQ
Sbjct  358  VVVAALEYRQDKWYEVTGIVLEGKLYRLRIRRLTPRECFRLQGFPDWAFDKAESVSSKSQ  417

Query  421  LYKQAGNSVTVPV  433
            LYKQAGNSVTV V
Sbjct  418  LYKQAGNSVTVTV  430

26) SPCG_1339 in NC_010582


> NC_009443_P1|86|G86|146320840|YP_001200551.1|Streptococcus_suis_98HAH33|-|86097..87452|-|SSU98_0993|C-5 
cytosine-specific 
DNA methylase
Length=451

 Score =  558 bits (2108),  Expect = 2e-160, Method: Compositional matrix adjust.
 Identities = 318/433 (74%), Positives = 387/433 (90%), Gaps = 3/433 (0%)

Query  1    MRFIDLFSGIGGFRLGMESVGHECIGFCEIDKFARESYKSIFQTEGEIEFHDIRDVSDDE  60
            M+F+DLF+GIGGFRLGMES GH C+GFCEIDKFAR SYK++F+TEGEIE+HDI++V+D++
Sbjct  1    MKFLDLFAGIGGFRLGMESQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHD  60

Query  61   FKKLRGKVDIICGGFPCQAFSIAGRRLGFEDIRGTLFFEIARAAKQIQPRFLFLENVKGL  120
            F+++RG+VDIICGGFPCQAFS+AGRRLGFED RGTLFFEIARAAKQIQPRFLFLENVKGL
Sbjct  61   FRQFRGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL  120

Query  121  LNHDKGRTFTTILTTLDELGFDVEWQVLNSKDFGVPQNRERVFIIGHSRKKGIRLLFPFR  180
            LNHD GRTF+TIL+TLDELG+DVEWQVLNSKDF VPQNRERVFIIGHSR+   R+LFP+R
Sbjct  121  LNHDEGRTFATILSTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYRPRFLFPLR  180

Query  181  REGQATNSETLKTLGNLNPSKSGMSGKVYYSEGLAPTLVRGKGEGFKIAIPCMTPDRLDK  240
            RE  +++   L  LGN+NPSK G++G VY ++GLAPTL RGKGEG KIAIP +TPDRL+K
Sbjct  181  RENSPAH---LERLGNINPSKRGLNGEVYLTNGLAPTLTRGKGEGAKIAIPVLTPDRLEK  237

Query  241  RQNGRRFKENQEPMFTLNTQDRHGIVVVGDLPTSFKETGRVYGSEGLSPTLTTMQGGDKI  300
            RQ+GRR+K+NQ+PMFTL +QDRHG+VV G+LPTSF +TGRV++  GLSPTLTTMQGGDK+
Sbjct  238  RQHGRRLKDNQDPMFTLTSQDRHGVVVAGNLPTSFDQTGRVFDISGLSPTLTTMQGGDKV  297

Query  301  PKILIPEPIQFLKVREATKKGYAQAEIGDSINLERPSSQYRRGRVGKGIANTLTTSGQMG  360
            PKIL+ E + FLK++EATK GYA+A +GDS+NL  P S  RRGRVGKGI+NTLTTS++MG
Sbjct  298  PKILLREELPFLKIKEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNMG  357

Query  361  VVVASYEGEDKQVYHVAGILIDGQFYRLRIRRITPKECFRLQGFPDWAFEAARRVSSNSQ  420
            VVVA+ E  + + Y+V+GI+++G++YRLRIRR+TP+ECFRLQGFPDWAF+ A  VSS+SQ
Sbjct  358  VVVAALEYRQDKWYEVTGIVLEGKLYRLRIRRLTPRECFRLQGFPDWAFDKAESVSSKSQ  417

Query  421  LYKQAGNSVTVPV  433
            LYKQAGNSVTV V
Sbjct  418  LYKQAGNSVTVTV  430

27) Spaf_1137 in NC_017905


> NC_009443_P1|86|G86|146320840|YP_001200551.1|Streptococcus_suis_98HAH33|-|86097..87452|-|SSU98_0993|C-5 
cytosine-specific 
DNA methylase
Length=451

 Score =  557 bits (2102),  Expect = 7e-160, Method: Compositional matrix adjust.
 Identities = 317/433 (74%), Positives = 387/433 (90%), Gaps = 3/433 (0%)

Query  29   MKFIDLFSGIGGFRLGMESVGHECIGFCEIDKFARESYKSIFQTEGEIEFHDIRDVSDDE  88
            MKF+DLF+GIGGFRLGMES GH C+GFCEIDKFAR SYK++F+TEGEIE+HDI++V+D++
Sbjct  1    MKFLDLFAGIGGFRLGMESQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHD  60

Query  89   FKKLRGKVDVICGGFPCQAFSIAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL  148
            F+++RG+VD+ICGGFPCQAFS+AGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL
Sbjct  61   FRQFRGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL  120

Query  149  LNHDKGRTFTTILTTLDELGFDVEWQVLNSKDFGVPQNRERVFIIGHSRKKGTRLLFPFR  208
            LNHD GRTF+TIL+TLDELG+DVEWQVLNSKDF VPQNRERVFIIGHSR+   R+LFP+R
Sbjct  121  LNHDEGRTFATILSTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYRPRFLFPLR  180

Query  209  REGQATNSETLKALGNLNPSRSGMSGKVYYSEGLAPTLVRGKGEGFKVAIPCMTPDRLEK  268
            RE  +++   L  LGN+NPS+ G++G VY ++GLAPTL RGKGEG K+AIP +TPDRLEK
Sbjct  181  RENSPAH---LERLGNINPSKRGLNGEVYLTNGLAPTLTRGKGEGAKIAIPVLTPDRLEK  237

Query  269  RQNGRRFKDNQEPMFTLNTQDRHGIVVVGDLPTSFKETGRVYGSEGLSPTLTTMQGGDKI  328
            RQ+GRR+KDNQ+PMFTL +QDRHG+VV G+LPTSF +TGRV++  GLSPTLTTMQGGDK+
Sbjct  238  RQHGRRLKDNQDPMFTLTSQDRHGVVVAGNLPTSFDQTGRVFDISGLSPTLTTMQGGDKV  297

Query  329  PKILIPEPIQFLKVREATKKGYDQAEIGDSINLERPSSQYRRGRVGKGIANTLTTSGQMG  388
            PKIL+ E + FLK++EATK GY +A +GDS+NL  P S  RRGRVGKGI+NTLTTS++MG
Sbjct  298  PKILLREELPFLKIKEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNMG  357

Query  389  VVVASYEGEDKQVYHVAGVLIDGQFYRLRIRRITPKECFRLQGFPDWAFEAARKVSSNSQ  448
            VVVA+ E  + + Y+V+G++++G++YRLRIRR+TP+ECFRLQGFPDWAF+ A  VSS+SQ
Sbjct  358  VVVAALEYRQDKWYEVTGIVLEGKLYRLRIRRLTPRECFRLQGFPDWAFDKAESVSSKSQ  417

Query  449  LYKQAGNSVTVPV  461
            LYKQAGNSVTV V
Sbjct  418  LYKQAGNSVTVTV  430

28) SPG_1291 in NC_011072


> NC_009443_P1|86|G86|146320840|YP_001200551.1|Streptococcus_suis_98HAH33|-|86097..87452|-|SSU98_0993|C-5 
cytosine-specific 
DNA methylase
Length=451

 Score =  555 bits (2095),  Expect = 2e-159, Method: Compositional matrix adjust.
 Identities = 317/433 (74%), Positives = 385/433 (89%), Gaps = 3/433 (0%)

Query  1    MRFIDLFSGIGGFRLGMESVGHECIGFCEIDKFARESYKSIFQTEGEIEFHDIRDVSDDE  60
            M+F+DLF+GIGGFRLGMES GH C+GFCEIDKFAR SYK++F+TEGEIE+HDI++V+D++
Sbjct  1    MKFLDLFAGIGGFRLGMESQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHD  60

Query  61   FKKLRGKVDIICGGFPCQAFSIAGRRLGFEDIRGTLFFEIARAAKQIQPRFLFLENVKGL  120
            F+++RG+VDIICGGFPCQAFS+AGRRLGFED RGTLFFEIARAAKQIQPRFLFLENVKGL
Sbjct  61   FRQFRGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL  120

Query  121  LNHDKGRTFTTILTTLDELGFDVEWQVLNSKDFGVPQNRERVFIIGHSRKKGTRLLFPFR  180
            LNHD GRTF+TIL+TLDELG+DVEWQVLNSKDF VPQNRERVFIIGHSR+   R+LFP+R
Sbjct  121  LNHDEGRTFATILSTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYRPRFLFPLR  180

Query  181  REGQATNSETLKTLGNLNPSKSGMSGKVYYSEGLAPTLVRGKGEGFKVAIPCMTPDRLEK  240
            RE  +++   L  LGN+NPSK G++G VY ++GLAPTL RGKGEG K+AIP +TPDRLEK
Sbjct  181  RENSPAH---LERLGNINPSKRGLNGEVYLTNGLAPTLTRGKGEGAKIAIPVLTPDRLEK  237

Query  241  RQNGRRFKENQEPMFTLNTQDLHGIVVVGDLPTSFKETGRVYGSDGLSPTLTTMQGGDKI  300
            RQ+GRR+K+NQ+PMFTL +QD HG+VV G+LPTSF +TGRV++  GLSPTLTTMQGGDK+
Sbjct  238  RQHGRRLKDNQDPMFTLTSQDRHGVVVAGNLPTSFDQTGRVFDISGLSPTLTTMQGGDKV  297

Query  301  PKILIPEPIHFLKIREATKKGYAQAEIGDSINLERPSSQYRRGRVGKGIXNTLTTSGQMG  360
            PKIL+ E + FLKI+EATK GYA+A +GDS+NL  P S  RRGRVGKGI NTLTTS++MG
Sbjct  298  PKILLREELPFLKIKEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNMG  357

Query  361  VVVASYEGEDKQVYHVAGVLINGQFYRLRIRRITPKECFRLQGFPDWAFEAARKVSSNSQ  420
            VVVA+ E  + + Y+V+G++++G++YRLRIRR+TP+ECFRLQGFPDWAF+ A  VSS+SQ
Sbjct  358  VVVAALEYRQDKWYEVTGIVLEGKLYRLRIRRLTPRECFRLQGFPDWAFDKAESVSSKSQ  417

Query  421  LYKQAGNSVTVPV  433
            LYKQAGNSVTV V
Sbjct  418  LYKQAGNSVTVTV  430

29) SII_0621 in NC_022237


> NC_009443_P1|86|G86|146320840|YP_001200551.1|Streptococcus_suis_98HAH33|-|86097..87452|-|SSU98_0993|C-5 
cytosine-specific 
DNA methylase
Length=451

 Score =  532 bits (2009),  Expect = 1e-152, Method: Compositional matrix adjust.
 Identities = 315/433 (73%), Positives = 388/433 (90%), Gaps = 3/433 (0%)

Query  1    MRFIDLFSGIGGFRLGMESVGHECIGFCEIDKFARESYKSIFQTEGEIEFHDIRDVSDDE  60
            M+F+DLF+GIGGFRLGMES GH C+GFCEIDKFAR SYK++F+TEGEIE+HDI++V+D++
Sbjct  1    MKFLDLFAGIGGFRLGMESQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHD  60

Query  61   FKKLRGKVDIICGGFPCQAFSIAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL  120
            F+++RG+VDIICGGFPCQAFS+AGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL
Sbjct  61   FRQFRGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL  120

Query  121  LNHDKGRTFTTILTTLDELGFDVEWQVLNSKDFGVPQNRERVFIIGHSRKKSTRLLFPFR  180
            LNHD GRTF+TIL+TLDELG+DVEWQVLNSKDF VPQNRERVFIIGHSR+   R+LFP+R
Sbjct  121  LNHDEGRTFATILSTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYRPRFLFPLR  180

Query  181  REGQATNSEILKTLGNLIPSKSGMSGKVYYSEGLAPTLARGKGEGFKIAIPCIAPDRLDK  240
            RE  +++   L  LGN+ PSK G++G VY ++GLAPTL+RGKGEG KIAIP ++PDRL+K
Sbjct  181  RENSPAH---LERLGNINPSKRGLNGEVYLTNGLAPTLTRGKGEGAKIAIPVLTPDRLEK  237

Query  241  RQNGRRFKENQEAMFTLNTQDRHGIVVVGDLPTSFKETGRVYGSEGLSPTLTTMQGGDki  300
            RQ+GRR+K+NQ++MFTL +QDRHG+VV G+LPTSF +TGRV++  GLSPTLTTMQGGDK+
Sbjct  238  RQHGRRLKDNQDPMFTLTSQDRHGVVVAGNLPTSFDQTGRVFDISGLSPTLTTMQGGDKV  297

Query  301  pkilipepikflkVREATKKGYAQAEIGDSINLERPSSQYRRGRVGKGIANTLTTSGQMG  360
            PKIL+ E + FLK++EATK GYA+A +GDS+NL  P S  RRGRVGKGI+NTLTTS++MG
Sbjct  298  PKILLREELPFLKIKEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNMG  357

Query  361  VVVASYEGEDKQVYHVAGVLIDGQFYRLRIRRITPKECFRLQGFPDWAFEAARKVSSNSQ  420
            VVVA+ E  + + Y+V+G++++G++YRLRIRR+TP+ECFRLQGFPDWAF+ A  VSS+SQ
Sbjct  358  VVVAALEYRQDKWYEVTGIVLEGKLYRLRIRRLTPRECFRLQGFPDWAFDKAESVSSKSQ  417

Query  421  LYKQAGNSVTVPV  433
            LYKQAGNSVTV V
Sbjct  418  LYKQAGNSVTVTV  430

30) SP_1336 in NC_003028


> NC_009443_P1|86|G86|146320840|YP_001200551.1|Streptococcus_suis_98HAH33|-|86097..87452|-|SSU98_0993|C-5 
cytosine-specific 
DNA methylase
Length=451

 Score =  518 bits (1956),  Expect = 2e-148, Method: Compositional matrix adjust.
 Identities = 291/403 (73%), Positives = 362/403 (90%), Gaps = 3/403 (0%)

Query  5    LDLFAGIGGFRMGMEAQGHECLGFCEIDKFARKSYKSIFQTEGEIEFHDIRDVSDDEFKK  64
            LDLFAGIGGFR+GME+QGH CLGFCEIDKFAR SYK++F+TEGEIE+HDI++V+D++F++
Sbjct  4    LDLFAGIGGFRLGMESQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHDFRQ  63

Query  65   LRGKVDVICGGFPCQAFSIAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGLLNH  124
            +RG+VD+ICGGFPCQAFS+AGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGLLNH
Sbjct  64   FRGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGLLNH  123

Query  125  DKGRTFTTILTTLDELGFDVEWQVLNSKDFGVPKNRERVFIIGHSRKKGTRLLFPFRREG  184
            D GRTF+TIL+TLDELG+DVEWQVLNSKDF VP+NRERVFIIGHSR+   R+LFP+RRE 
Sbjct  124  DEGRTFATILSTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYRPRFLFPLRREN  183

Query  185  QATNSETLKALGNLNPSRSGMSGKVYYSEGLAPTLVRGKGEGFKVAIPCMTPDRLDKRQN  244
             +++   L  LGN+NPS+ G++G VY ++GLAPTL RGKGEG K+AIP +TPDRL+KRQ+
Sbjct  184  SPAH---LERLGNINPSKRGLNGEVYLTNGLAPTLTRGKGEGAKIAIPVLTPDRLEKRQH  240

Query  245  GRRFKENQEPMFTLNTQDRYGIVVVGDLPTSFKETGRVYGSEGLSPTLTTMQGGDKIPKI  304
            GRR+K+NQ+PMFTL +QDR G+VV G+LPTSF +TGRV++  GLSPTLTTMQGGDK+PKI
Sbjct  241  GRRLKDNQDPMFTLTSQDRHGVVVAGNLPTSFDQTGRVFDISGLSPTLTTMQGGDKVPKI  300

Query  305  LIPEPIQFLKVREATKKGYAQAEIGDSINLERPSSQYRRGRVGKGIANTLTTSGQMGVVV  364
            L+ E + FLK++EATK GYA+A +GDS+NL  P S  RRGRVGKGI+NTLTTS++MGVVV
Sbjct  301  LLREELPFLKIKEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNMGVVV  360

Query  365  ASYEGEDKQVYQVAGVLIDGQFYRLRIRRITPKECFRLHGFPD  407
            A+ E  + + Y+V+G++++G++YRLRIRR+TP+ECFRL+GFPD
Sbjct  361  AALEYRQDKWYEVTGIVLEGKLYRLRIRRLTPRECFRLQGFPD  403

31) dcm in NC_017582


> NC_009443_P1|86|G86|146320840|YP_001200551.1|Streptococcus_suis_98HAH33|-|86097..87452|-|SSU98_0993|C-5 
cytosine-specific 
DNA methylase
Length=451

 Score =  515 bits (1941),  Expect = 3e-147, Method: Compositional matrix adjust.
 Identities = 326/363 (90%), Positives = 349/363 (97%), Gaps = 0/363 (0%)

Query  1    MDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGLLSHDKGE  60
            +DIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGLL+HD G 
Sbjct  68   VDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGLLNHDEGR  127

Query  61   TFRTILTTLDELGYDVEWQVLNSKDFQVPQNRERIFIIGHSrryrprflfplrGENSSAG  120
            TF TIL+TLDELGYDVEWQVLNSKDFQVPQNRER+FIIGHSRRYRPRFLFPLR ENS+A 
Sbjct  128  TFATILSTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYRPRFLFPLRRENSPAH  187

Query  121  LERLGNVNPSGKGMNGEVYLSSGLAPTLTRGKGEGTKIAIPVLTPDRLEKRQHGRRFKGN  180
            LERLGN+NPS +G+NGEVYL++GLAPTLTRGKGEG+KIAIPVLTPDRLEKRQHGRR+K+N
Sbjct  188  LERLGNINPSKRGLNGEVYLTNGLAPTLTRGKGEGAKIAIPVLTPDRLEKRQHGRRLKDN  247

Query  181  DDPMFTLTSQDRHGVVVAGTLPTSFIQTGRVYDLSGLCPTLTTMQGGDKVPKILYREEAP  240
            +DPMFTLTSQDRHGVVVAG LPTSF QTGRV+D+SGL PTLTTMQGGDKVPKIL REE P
Sbjct  248  QDPMFTLTSQDRHGVVVAGNLPTSFDQTGRVFDISGLSPTLTTMQGGDKVPKILLREELP  307

Query  241  HLKIREATKLGYAKAIVGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNMGVVVAALEYRK  300
             LKI+EATK GYAKA +GDSVNLAYPDSTKRRGRVGKGISNTLTTSDNMGVVVAALEYR+
Sbjct  308  FLKIKEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNMGVVVAALEYRQ  367

Query  301  DKWYEVTGIILDGKLYRLRIRRLTPRECFRLQGFPDWAFERAESVSSKSQLYKQAGNSVT  360
            DKWYEVTGI+L+GKLYRLRIRRLTPRECFRLQGFPDWAF++AESVSSKSQLYKQAGNSVT
Sbjct  368  DKWYEVTGIVLEGKLYRLRIRRLTPRECFRLQGFPDWAFDKAESVSSKSQLYKQAGNSVT  427

Query  361  VTV  363
            VTV
Sbjct  428  VTV  430

32) SPAP_1364 in NC_014494


> NC_009443_P1|86|G86|146320840|YP_001200551.1|Streptococcus_suis_98HAH33|-|86097..87452|-|SSU98_0993|C-5 
cytosine-specific 
DNA methylase
Length=451

 Score =  503 bits (1896),  Expect = 9e-144, Method: Compositional matrix adjust.
 Identities = 280/392 (72%), Positives = 351/392 (90%), Gaps = 3/392 (0%)

Query  1    MGMEAQGHECLGFCEIDKFARKSYKSIFQTEGEIEFHDIRDVSDDEFKKLRGKVDVICGG  60
            +GME+QGH CLGFCEIDKFAR SYK++F+TEGEIE+HDI++V+D++F+++RG+VD+ICGG
Sbjct  15   LGMESQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHDFRQFRGQVDIICGG  74

Query  61   FPCQAFSIAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGLLNHDKGRTFTTILT  120
            FPCQAFS+AGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGLLNHD GRTF+TIL+
Sbjct  75   FPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGLLNHDEGRTFATILS  134

Query  121  TLDELGFDVEWQVLNSKDFGVPKNRERVFIIGHSRKKGTRLLFPFRREGQATNSETLKAL  180
            TLDELG+DVEWQVLNSKDF VP+NRERVFIIGHSR+   R+LFP+RRE  +++   L  L
Sbjct  135  TLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYRPRFLFPLRRENSPAH---LERL  191

Query  181  GNLNPSRSGMSGKVYYSEGLAPTLVRGKGEGFKVAIPCMTPDRLDKRQNGRRFKENQEPM  240
            GN+NPS+ G++G VY ++GLAPTL RGKGEG K+AIP +TPDRL+KRQ+GRR+K+NQ+PM
Sbjct  192  GNINPSKRGLNGEVYLTNGLAPTLTRGKGEGAKIAIPVLTPDRLEKRQHGRRLKDNQDPM  251

Query  241  FTLNTQDRYGIVVVGDLPTSFKETGRVYGSEGLSPTLTTMQGGDKIPKILIPEPIQFLKV  300
            FTL +QDR G+VV G+LPTSF +TGRV++  GLSPTLTTMQGGDK+PKIL+ E + FLK+
Sbjct  252  FTLTSQDRHGVVVAGNLPTSFDQTGRVFDISGLSPTLTTMQGGDKVPKILLREELPFLKI  311

Query  301  REATKKGYAQAEIGDSINLERPSSQYRRGRVGKGIANTLTTSGQMGVVVASYEGEDKQVY  360
            +EATK GYA+A +GDS+NL  P S  RRGRVGKGI+NTLTTS++MGVVVA+ E  + + Y
Sbjct  312  KEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNMGVVVAALEYRQDKWY  371

Query  361  QVAGVLIDGQFYRLRIRRITPKECFRLHGFPD  392
            +V+G++++G++YRLRIRR+TP+ECFRL+GFPD
Sbjct  372  EVTGIVLEGKLYRLRIRRLTPRECFRLQGFPD  403

33) dcm2 in NC_017576


> NC_009443_P1|86|G86|146320840|YP_001200551.1|Streptococcus_suis_98HAH33|-|86097..87452|-|SSU98_0993|C-5 
cytosine-specific 
DNA methylase
Length=451

 Score =  416 bits (1567),  Expect = 1e-117, Method: Compositional matrix adjust.
 Identities = 263/438 (61%), Positives = 324/438 (74%), Gaps = 53/438 (12%)

Query  1    MDFLDLFAGIGGFRMGLERLGHHCVGFCEIDKFARASYKAIYHTEGEVEFHDITKVRSEE  60
            M FLDLFAGIGGFR+G+E  GH C+GFCEIDKFAR+SYKA+++TEGE+E+HDI  V  ++
Sbjct  1    MKFLDLFAGIGGFRLGMESQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHD  60

Query  61   WRQFRGKVDLICGGFPCQAFSIAGKRRGFLDETRGTLFFEIARAAKEIKPPLLLLENVKG  120
             RQFRG+VD+ICGGFPCQAFS+AG+R GF ++TRGTLFFEIARAAK+I+P +L+LENVKG
Sbjct  61   FRQFRGQVDIICGGFPCQAFSLAGRRLGF-EDTRGTLFFEIARAAKQIQPRFLFLENVKG  119

Query  121  LLSHDKGRTFRTILSTLDELGYDAEWQVLNSKDFGVPQNRERVFIIGHLRGRSERTIFPI  180
            LL+HD GRTF TILSTLDELGYD EWQVLNSKDF VPQNRERVFIIGH R    R +FP+
Sbjct  120  LLNHDEGRTFATILSTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYRPRFLFPL  179

Query  181  RGESPTVDSCKPKRLGNINPSGRGMNGEVYRIDTPSPTVTTNKGEGSKIAIPVLTPDRAK  240
            R E++  +     RLGNINPS RG+NGEVY  +  +PT+T  KGEG+KIAIPVLTPDR  
Sbjct  180  RRENSPAH---LERLGNINPSKRGLNGEVYLTNGLAPTLTRGKGEGAKIAIPVLTPDRLE  236

Query  241  KRQNGRRFKTDGEPMFTLTSQDRHGIVIAGRLPSARQQSGRVYSSNGLAPTLSTMQGGDQ  300
            KRQ+GRR+K + +PMFTLTSQDRHG+V+AG LP++ +Q+GRV+  +GL+PTL+TMQGGD+
Sbjct  237  KRQHGRRLKDNQDPMFTLTSQDRHGVVVAGNLPTSFDQTGRVFDISGLSPTLTTMQGGDK  296

Query  301  EPKIIQRA------------RGYNKGG-------------------THQLSPTLSS----  325
             PKI+ R              GY K+                       +S TL++    
Sbjct  297  VPKILLREELPFLKIKEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNM  356

Query  326  -----------HHWQENHFVSLPQR---FRIRKLTPRECWRLQGFPDWAFDKAQAVNSNS  371
                       + W E   + L  +   +RIR+LTPREC RLQGFPDWAFDKA++V+S+S
Sbjct  357  GVVVAALEYRQDKWYEVTGIVLEGKLYRLRIRRLTPRECFRLQGFPDWAFDKAESVSSKS  416

Query  372  QLYKQAGNSVTVPVIEAI  389
            QLYKQAGNSVTV VIEAI
Sbjct  417  QLYKQAGNSVTVTVIEAI  434

34) KE3_1019 in NC_021900


> NC_009443_P1|86|G86|146320840|YP_001200551.1|Streptococcus_suis_98HAH33|-|86097..87452|-|SSU98_0993|C-5 
cytosine-specific 
DNA methylase
Length=451

 Score =  416 bits (1567),  Expect = 1e-117, Method: Compositional matrix adjust.
 Identities = 263/438 (61%), Positives = 324/438 (74%), Gaps = 53/438 (12%)

Query  1    MDFLDLFAGIGGFRMGLERLGHHCVGFCEIDKFARASYKAIYHTEGEVEFHDITKVRSEE  60
            M FLDLFAGIGGFR+G+E  GH C+GFCEIDKFAR+SYKA+++TEGE+E+HDI  V  ++
Sbjct  1    MKFLDLFAGIGGFRLGMESQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHD  60

Query  61   WRQFRGKVDLICGGFPCQAFSIAGKRRGFLDETRGTLFFEIARAAKEIKPPLLLLENVKG  120
             RQFRG+VD+ICGGFPCQAFS+AG+R GF ++TRGTLFFEIARAAK+I+P +L+LENVKG
Sbjct  61   FRQFRGQVDIICGGFPCQAFSLAGRRLGF-EDTRGTLFFEIARAAKQIQPRFLFLENVKG  119

Query  121  LLSHDKGRTFRTILSTLDELGYDAEWQVLNSKDFGVPQNRERVFIIGHLRGRSERTIFPI  180
            LL+HD GRTF TILSTLDELGYD EWQVLNSKDF VPQNRERVFIIGH R    R +FP+
Sbjct  120  LLNHDEGRTFATILSTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYRPRFLFPL  179

Query  181  RGESPTVDSCKPKRLGNINPSGRGMNGEVYRIDTPSPTVTTNKGEGSKIAIPVLTPDRAK  240
            R E++  +     RLGNINPS RG+NGEVY  +  +PT+T  KGEG+KIAIPVLTPDR  
Sbjct  180  RRENSPAH---LERLGNINPSKRGLNGEVYLTNGLAPTLTRGKGEGAKIAIPVLTPDRLE  236

Query  241  KRQNGRRFKTDGEPMFTLTSQDRHGIVIAGRLPSARQQSGRVYSSNGLAPTLSTMQGGDQ  300
            KRQ+GRR+K + +PMFTLTSQDRHG+V+AG LP++ +Q+GRV+  +GL+PTL+TMQGGD+
Sbjct  237  KRQHGRRLKDNQDPMFTLTSQDRHGVVVAGNLPTSFDQTGRVFDISGLSPTLTTMQGGDK  296

Query  301  EPKIIQRA------------RGYNKGG-------------------THQLSPTLSS----  325
             PKI+ R              GY K+                       +S TL++    
Sbjct  297  VPKILLREELPFLKIKEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNM  356

Query  326  -----------HHWQENHFVSLPQR---FRIRKLTPRECWRLQGFPDWAFDKAQAVNSNS  371
                       + W E   + L  +   +RIR+LTPREC RLQGFPDWAFDKA++V+S+S
Sbjct  357  GVVVAALEYRQDKWYEVTGIVLEGKLYRLRIRRLTPRECFRLQGFPDWAFDKAESVSSKS  416

Query  372  QLYKQAGNSVTVPVIEAI  389
            QLYKQAGNSVTV VIEAI
Sbjct  417  QLYKQAGNSVTVTVIEAI  434

35) SAG1869 in NC_004116


> NC_009443_P1|86|G86|146320840|YP_001200551.1|Streptococcus_suis_98HAH33|-|86097..87452|-|SSU98_0993|C-5 
cytosine-specific 
DNA methylase
Length=451

 Score =  377 bits (1416),  Expect = 1e-105, Method: Compositional matrix adjust.
 Identities = 261/471 (56%), Positives = 315/471 (67%), Gaps = 74/471 (15%)

Query  1    MKFLDLFAGIGGFRLGMEQAGHECIGFCEINKFARASYKVIHDTEGEIELHDITRVSD-E  59
            MKFLDLFAGIGGFRLGME  GH C+GFCEI+KFAR+SYK + +TEGEIE HDI  V+D +
Sbjct  1    MKFLDLFAGIGGFRLGMESQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHD  60

Query  60   FIRGIGSVDVICGGFPCQAFSIAGNRRGFEDTRGTLFFEIARFASILRPKYLFLENVKGL  119
            F +  G VD+ICGGFPCQAFS+AG R GFEDTRGTLFFEIAR A  ++P++LFLENVKGL
Sbjct  61   FRQFRGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL  120

Query  120  LNHEGGATFETIIRTLDELGYNVEWQIFNSKNFGVPQNRERVFIIGHLRGEGTRPIFPFE  179
            LNH+ G TF TI+ TLDELGY+VEWQ++NSK+F VPQNRERVFIIGH R    R +FP+ 
Sbjct  121  LNHDEGRTFATILSTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYRPRFLFPLR  180

Query  180  SSITENYPIHTRKIGNVNPSGNGMNGEVYDSEGLSPTLTTNKGEGVKIAVNVV-------  232
                EN P H  ++GN+NPS  G+NGEVY ++GL+PTLT  KGEG KIA+ V+       
Sbjct  181  R---ENSPAHLERLGNINPSKRGLNGEVYLTNGLAPTLTRGKGEGAKIAIPVLTPDRLEK  237

Query  233  ----------------------------GRLPGKFEMPNRVYDPDGLAPTIRTMQGGGLE  264
                                        G LP  F+   RV+D  GL+PT+ TMQGG+  
Sbjct  238  RQHGRRLKDNQDPMFTLTSQDRHGVVVAGNLPTSFDQTGRVFDISGLSPTLTTMQGGDKV  297

Query  265  PKIIQRGRGYNQGGEYEISPTVTCNSWQENNLLKIKEATKKGYSEAEAGDSVNLSHPNSE  324
            PKI+ R                     +E  +LKIKEATK GY+ A  GDSVNL+ P+S 
Sbjct  298  PKILLR---------------------EELPFLKIKEATKTGYAKATLGDSVNLAYPDST  336

Query  325  TRRGRVGKGIANTLLTGEEQGVVVYDLYNRRKK--DIVGTLtasghngntttgtfgisng  382
             RRGRVGKGI+NTL T+++ GVVV  L  R+ K  ++ G +              G    
Sbjct  337  KRRGRVGKGISNTLTTSDNMGVVVAALEYRQDKWYEVTGIV------------LEGKLYR  384

Query  383  FRIRKLTPRECWRLQGFPDWAFDKASQVNSNSQLYKQAGNSVTVNVIAAIA  433
            +RIR+LTPREC RLQGFPDWAFDKA  V+S+SQLYKQAGNSVTV VI AIA
Sbjct  385  LRIRRLTPRECFRLQGFPDWAFDKAESVSSKSQLYKQAGNSVTVTVIEAIA  435

36) MYY_0063 in NC_017769


> NC_009443_P1|86|G86|146320840|YP_001200551.1|Streptococcus_suis_98HAH33|-|86097..87452|-|SSU98_0993|C-5 
cytosine-specific 
DNA methylase
Length=451

 Score =  377 bits (1419),  Expect = 5e-106, Method: Compositional matrix adjust.
 Identities = 260/459 (57%), Positives = 312/459 (68%), Gaps = 77/459 (16%)

Query  1    MKFLDLFAGIGGFRIGMESAGHECIGFCEIDKFARASYKAIHDTKGEIELHDITTVSDDT  60
            MKFLDLFAGIGGFR+GMES GH C+GFCEIDKFAR+SYKA+ +T GEIE HDI  V+D+ 
Sbjct  1    MKFLDLFAGIGGFRLGMESQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHD  60

Query  61   IRGI-GSVDIICGGFPCQAFSIAGNRRGFEDTRGTLFFEIARFASILRPKYLFLENVKGL  119
            +R + G VDIICGGFPCQAFS+AG R GFEDTRGTLFFEIAR A  ++P++LFLENVKGL
Sbjct  61   FRQFRGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL  120

Query  120  LNHENGVTFETIISTLDELGYNVEWQVLNSKNFGVPQNRERVFIIGHLRGGSGRKVFPLS  179
            LNH++G TF TI+STLDELGY+VEWQVLNSK+F VPQNRERVFIIGH R    R +FPL 
Sbjct  121  LNHDEGRTFATILSTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYRPRFLFPLR  180

Query  180  RENQSISNQSVVKIGNVNPSGNGMNGEVYQADGLAPTLTTNKGEGQKIAI----------  229
            REN   S   + ++GN+NPS  G+NGEVY ++GLAPTLT  KGEG KIAI          
Sbjct  181  REN---SPAHLERLGNINPSKRGLNGEVYLTNGLAPTLTRGKGEGAKIAIPVLTPDRLEK  237

Query  230  -------KSNTIKQF-------------GVLQPNFNQCGVVYETDGIAPTIRAYQGGGLE  269
                   K N    F             G L  +F+Q G V++  G++PT+ + QGG+  
Sbjct  238  RQHGRRLKDNQDPMFTLTSQDRHGVVVAGNLPTSFDQTGRVFDISGLSPTLTTMQGGDKV  297

Query  270  PKIIQRGHGYNKGGEHDIAPTLTRNSYHENNVLKITEATSQGYAEATIGDSVNLSHPNSK  329
            PKI+ R                     +E   LKI EAT  GYA AT+GDSVNL+ P+S 
Sbjct  298  PKILLR---------------------EELPFLKIKEATKTGYAKATLGDSVNLAYPDST  336

Query  330  TRRGRVGKKIANTLLTGESQGVVEPD----------------------FRIRKLTPRECW  367
             RRGRVGK I+NTL T+++ GVV +                       +RIR+LTPREC 
Sbjct  337  KRRGRVGKGISNTLTTSDNMGVVVAALEYRQDKWYEVTGIVLEGKLYRLRIRRLTPRECF  396

Query  368  RLQGFPDWAFDKAQEVNSNSQLYKQAGNSVTVSVIAAIA  406
            RLQGFPDWAFDKA+ V+S+SQLYKQAGNSVTV+VI AIA
Sbjct  397  RLQGFPDWAFDKAESVSSKSQLYKQAGNSVTVTVIEAIA  435

37) lmo4a_1229 in NC_017529


> NC_009443_P1|86|G86|146320840|YP_001200551.1|Streptococcus_suis_98HAH33|-|86097..87452|-|SSU98_0993|C-5 
cytosine-specific 
DNA methylase
Length=451

 Score =  357 bits (1341),  Expect = 8e-100, Method: Compositional matrix adjust.
 Identities = 226/443 (52%), Positives = 309/443 (70%), Gaps = 25/443 (5%)

Query  1    MKFLDLFAGIGGFRLGMERAGHECVGYVEIDKFARKSYQAIHDTEGEWTREDITKVTDEE  60
            MKFLDLFAGIGGFRLGME  GH C+G+ EIDKFAR SY+A+ +TEGE   +DI  VTD++
Sbjct  1    MKFLDLFAGIGGFRLGMESQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHD  60

Query  61   WRTLRGTVDIICGGFPCQSFSIAGKRLGFEETRGTLFFEIARAAKQIQPRYLFLENVKGL  120
             R +RG VDIICGGFPCQ+FS+AG+RLGFE+TRGTLFFEIARAAKQIQPR+LFLENVKGL
Sbjct  61   FRQFRGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL  120

Query  121  LSHNKGETFATILTALHELGYDAEWQILNSKDFGVPQNRERVFIIGHLRGAGGREIFPLA  180
            L+H+ G TFATIL++L+ELGYD EWQ+LNSKDF VPQNRERVFIIGH R    R +FPL 
Sbjct  121  LNHDEGRTFATILSTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYRPRFLFPLR  180

Query  181  EASRTADESRVIANTLTARYPYSQREGTYIET------TRKSEQ----VMPVLTPDRIIK  230
              +  A+  R+     + R   +     Y+        TR   +     +PVLTPDR+ K
Sbjct  181  RENSPAHLERLGNINPSKR---GLNGEVYLTNGLAPTLTRGKGEGAKIAIPVLTPDRLEK  237

Query  231  RQNGRRFKTLGEPAFTLTAQDQHGIIVFGELEGSGREQSNRIYSEKGLAPTLTTMQGGGQ  290
            RQ+GRR+K   +P FTLT+QD+HG++V G+L  ++ +Q+ R++   GL+PTLTTMQGG++
Sbjct  238  RQHGRRLKDNQDPMFTLTSQDRHGVVVAGNL-PTSFDQTGRVFDISGLSPTLTTMQGGDK  296

Query  291  EPKIAIVGNVNPSK-RGMNGEVYSSEGLAPTLT-TNKGEGQKVAIIQKARGYNKGGKHDI  348
             PKI +  ++   K +      Y+   L+ ++  +  +  ++ + + K+ +      +++
Sbjct  297  VPKILLREELPFLKIKEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNM  356

Query  349  APTLSSSSWQENN-------LLQKGNF--RIRKLTPRECWRLQGFPDWAFDRAAEVNSNS  399
            +  +++   ++++       +L+   +  RIR+LTPREC RLQGFPDWAFD+A  V+S+S
Sbjct  357  GVVVAALEYRQDKWYEVTGIVLEGKLYRLRIRRLTPRECFRLQGFPDWAFDKAESVSSKS  416

Query  400  QLYKQSGNSVTENVIWKIAKLFK  422
            QLYKQ+GNSVT  VI  IA  F+
Sbjct  417  QLYKQAGNSVTVTVIEAIASEFR  439

38) lmo4a_2641 in NC_017529


> NC_009443_P1|86|G86|146320840|YP_001200551.1|Streptococcus_suis_98HAH33|-|86097..87452|-|SSU98_0993|C-5 
cytosine-specific 
DNA methylase
Length=451

 Score =  357 bits (1341),  Expect = 8e-100, Method: Compositional matrix adjust.
 Identities = 226/443 (52%), Positives = 309/443 (70%), Gaps = 25/443 (5%)

Query  1    MKFLDLFAGIGGFRLGMERAGHECVGYVEIDKFARKSYQAIHDTEGEWTREDITKVTDEE  60
            MKFLDLFAGIGGFRLGME  GH C+G+ EIDKFAR SY+A+ +TEGE   +DI  VTD++
Sbjct  1    MKFLDLFAGIGGFRLGMESQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHD  60

Query  61   WRTLRGTVDIICGGFPCQSFSIAGKRLGFEETRGTLFFEIARAAKQIQPRYLFLENVKGL  120
             R +RG VDIICGGFPCQ+FS+AG+RLGFE+TRGTLFFEIARAAKQIQPR+LFLENVKGL
Sbjct  61   FRQFRGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL  120

Query  121  LSHNKGETFATILTALHELGYDAEWQILNSKDFGVPQNRERVFIIGHLRGAGGREIFPLA  180
            L+H+ G TFATIL++L+ELGYD EWQ+LNSKDF VPQNRERVFIIGH R    R +FPL 
Sbjct  121  LNHDEGRTFATILSTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYRPRFLFPLR  180

Query  181  EASRTADESRVIANTLTARYPYSQREGTYIET------TRKSEQ----VMPVLTPDRIIK  230
              +  A+  R+     + R   +     Y+        TR   +     +PVLTPDR+ K
Sbjct  181  RENSPAHLERLGNINPSKR---GLNGEVYLTNGLAPTLTRGKGEGAKIAIPVLTPDRLEK  237

Query  231  RQNGRRFKTLGEPAFTLTAQDQHGIIVFGELEGSGREQSNRIYSEKGLAPTLTTMQGGGQ  290
            RQ+GRR+K   +P FTLT+QD+HG++V G+L  ++ +Q+ R++   GL+PTLTTMQGG++
Sbjct  238  RQHGRRLKDNQDPMFTLTSQDRHGVVVAGNL-PTSFDQTGRVFDISGLSPTLTTMQGGDK  296

Query  291  EPKIAIVGNVNPSK-RGMNGEVYSSEGLAPTLT-TNKGEGQKVAIIQKARGYNKGGKHDI  348
             PKI +  ++   K +      Y+   L+ ++  +  +  ++ + + K+ +      +++
Sbjct  297  VPKILLREELPFLKIKEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNM  356

Query  349  APTLSSSSWQENN-------LLQKGNF--RIRKLTPRECWRLQGFPDWAFDRAAEVNSNS  399
            +  +++   ++++       +L+   +  RIR+LTPREC RLQGFPDWAFD+A  V+S+S
Sbjct  357  GVVVAALEYRQDKWYEVTGIVLEGKLYRLRIRRLTPRECFRLQGFPDWAFDKAESVSSKS  416

Query  400  QLYKQSGNSVTENVIWKIAKLFK  422
            QLYKQ+GNSVT  VI  IA  F+
Sbjct  417  QLYKQAGNSVTVTVIEAIASEFR  439

39) LM220_21930 in NC_021830


> NC_009443_P1|86|G86|146320840|YP_001200551.1|Streptococcus_suis_98HAH33|-|86097..87452|-|SSU98_0993|C-5 
cytosine-specific 
DNA methylase
Length=451

 Score =  354 bits (1330),  Expect = 7e-99, Method: Compositional matrix adjust.
 Identities = 227/467 (49%), Positives = 316/467 (68%), Gaps = 40/467 (8%)

Query  1    MKFLDLFAGIGGFRLGMERAGHECVGYVEIDKFARKSYQAIHDTEGEWTREDITKVTDDE  60
            MKFLDLFAGIGGFRLGME  GH C+G+ EIDKFAR SY+A+ +TEGE   +DI  VTD++
Sbjct  1    MKFLDLFAGIGGFRLGMESQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHD  60

Query  61   WRTLRGTVDIICGGFPCQSFSIAGKRLGFEETRGTLFFEIARAAKQIQPRYLFLENVKGL  120
             R +RG VDIICGGFPCQ+FS+AG+RLGFE+TRGTLFFEIARAAKQIQPR+LFLENVKGL
Sbjct  61   FRQFRGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL  120

Query  121  LSHNKGETFATILTALHELGYDAEWQILNSKDFGVPQNRERVFIIGHLRGAGGREIFPLA  180
            L+H+ G TFATIL++L+ELGYD EWQ+LNSKDF VPQNRERVFIIGH R    R +FPL 
Sbjct  121  LNHDEGRTFATILSTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYRPRFLFPLR  180

Query  181  EASRTADESSVIANTLTARYPYSQREGTYIET------TRKSEQ----VMPVLTPDRIIK  230
              +  A+   +     + R   +     Y+        TR   +     +PVLTPDR+ K
Sbjct  181  RENSPAHLERLGNINPSKR---GLNGEVYLTNGLAPTLTRGKGEGAKIAIPVLTPDRLEK  237

Query  231  RQNGRRFKTPGEPAFTLTAQDQHGIIVFGELEGSRREQSNRIYSEKGLASTLTTMQGGGQ  290
            RQ+GRR+K   +P FTLT+QD+HG++V G+L  S  +Q+ R++   GL++TLTTMQGG++
Sbjct  238  RQHGRRLKDNQDPMFTLTSQDRHGVVVAGNLPTS-FDQTGRVFDISGLSPTLTTMQGGDK  296

Query  291  EPKIAIVGNVNPSK-RGMNGEVYSSEGLAPTLT-TNKGEGQKVAIIQKSRGFNQGGKHDI  348
             PKI +  ++   K +      Y+   L+ ++  +  +  ++ + + K+ +      +++
Sbjct  297  VPKILLREELPFLKIKEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNM  356

Query  349  APTLSSSSWQENNLLQIGGLYLNDSSRFFRGVLPNLSRTLKSSSNDAGVTDGIRIRKLTP  408
            +  +++   ++++  ++ G+ L+  ++++R                      +RIR+LTP
Sbjct  357  GVVVAALEYRQDKWYEVTGIVLE--GKLYR----------------------LRIRRLTP  392

Query  409  RECWRLQGFPDWAFDRAAEVNSNSQLYKQSGNSVTENVIWEIATKFK  455
            REC RLQGFPDWAFD+A  V+S+SQLYKQ+GNSVT  VI  IA+ F+
Sbjct  393  RECFRLQGFPDWAFDKAESVSSKSQLYKQAGNSVTVTVIEAIASEFR  439

40) EFAU085_02797 in NC_021994


> NC_009443_P1|86|G86|146320840|YP_001200551.1|Streptococcus_suis_98HAH33|-|86097..87452|-|SSU98_0993|C-5 
cytosine-specific 
DNA methylase
Length=451

 Score =  341 bits (1282),  Expect = 3e-95, Method: Compositional matrix adjust.
 Identities = 229/433 (53%), Positives = 289/433 (67%), Gaps = 70/433 (16%)

Query  1    MTFLDLFAGIGGFRLGMEQAGHQCIGFCEIDEFARRSYKAIHDTRKEVEMHDITSVSD-E  59
            M FLDLFAGIGGFRLGME  GH+C+GFCEID FAR SYKA+ +T  E+E HDI  V+D +
Sbjct  1    MKFLDLFAGIGGFRLGMESQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHD  60

Query  60   FVRSLGPVDILCGGFPCQAFSIAGKRQGFSDTRGTLFFEIARFATLLQPKFLFLENVRGL  119
            F +  G VDI+CGGFPCQAFS+AG+R GF DTRGTLFFEIAR A  +QP+FLFLENV+GL
Sbjct  61   FRQFRGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL  120

Query  120  LNHEGGATFETILRTLDGLGYDVEWQVLNSKAY-VPQSRERIFLIGHSRDACTEQVFPII  178
            LNH+ G TF TIL TLD LGYDVEWQVLNSK + VPQ+RER+F+IGHSR      +FP+ 
Sbjct  121  LNHDEGRTFATILSTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYRPRFLFPL-  179

Query  179  GSSSTSDQNIRNLVNINPSNRGMGGQVYGSDSVAPTLT--GDEGIKIALPV---------  227
                 S  ++  L NINPS+RG+ G+VY ++++APTLT   +EG KIA+PV         
Sbjct  180  -RRENSPAHLERLGNINPSKRGLNGEVYLTNGLAPTLTRGKGEGAKIAIPVLTPDRLEKR  238

Query  228  --------------------KDGISVAGMLSGNFEQGNRIYEVTGTAPTLSTKQGG---T  264
                                ++G+ VAG L+ +F+Q  R+++++G +PTL+T QGG    
Sbjct  239  QHGRRLKDNQDPMFTLTSQDRHGVVVAGNLPTSFDQTGRVFDISGLSPTLTTMQGGDKVP  298

Query  265  KIMIRKN----------ETEYQEVKPGDSVNLAFPNSTSRRGRLGKQSVHTLLTGDQQAV  314
            KI++R +           T Y     GDSVNLA+P+ST RRGR+GK   +TL T+D+ +V
Sbjct  299  KILLREELPFLKIKEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNMGV  358

Query  315  VTD--QY--------------------QIRKLTPRECWRLQGFPDWAFDRASQVNSDSQL  352
            V    +Y                    +IR+LTPREC RLQGFPDWAFD+A  V+S SQL
Sbjct  359  VVAALEYRQDKWYEVTGIVLEGKLYRLRIRRLTPRECFRLQGFPDWAFDKAESVSSKSQL  418

Query  353  YKQAGNSVTVPVI  365
            YKQAGNSVTV VI
Sbjct  419  YKQAGNSVTVTVI  431

41) EFAU004_01862 in NC_017022


> NC_009443_P1|86|G86|146320840|YP_001200551.1|Streptococcus_suis_98HAH33|-|86097..87452|-|SSU98_0993|C-5 
cytosine-specific 
DNA methylase
Length=451

 Score =  339 bits (1272),  Expect = 2e-94, Method: Compositional matrix adjust.
 Identities = 234/447 (53%), Positives = 292/447 (66%), Gaps = 70/447 (15%)

Query  1    MTFLDLFAGIGGFCLGMEQAGHQCIGFCEIDDFARQSYKAIHDTSKEVEMHDITSVSD-E  59
            M FLDLFAGIGGF LGME  GH+C+GFCEID FAR SYKA+ +T  E+E HDI  V+D +
Sbjct  1    MKFLDLFAGIGGFRLGMESQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHD  60

Query  60   FIQSLGPVDILCGGFPCQAFSIAGKRQGFSDTRGTLFFEIARFAAILQPKFLFLENVRGL  119
            F Q  G VDI+CGGFPCQAFS+AG+R GF DTRGTLFFEIAR A  +QP+FLFLENV+GL
Sbjct  61   FRQFRGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL  120

Query  120  LNHEGGATFETILRTLDGLGYDVEWQVLNSKAY-VPQNRERIFLIGHSRDACTEQVFPII  178
            LNH+ G TF TIL TLD LGYDVEWQVLNSK + VPQNRER+F+IGHSR      +FP+ 
Sbjct  121  LNHDEGRTFATILSTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYRPRFLFPL-  179

Query  179  GSSPTSDQNIRNLLNINPSNRGMGGQVYGSDDVAPTLT--GDEGIKIALPV---------  227
                 S  ++  L NINPS+RG+ G+VY ++++APTLT   +EG KIA+PV         
Sbjct  180  -RRENSPAHLERLGNINPSKRGLNGEVYLTNGLAPTLTRGKGEGAKIAIPVLTPDRLEKR  238

Query  228  --------------------DDGISVAGMLLGNFEQGNRVYEITGTAPTLSTKQGG---T  264
                                 +G+ VAG L  +F+Q  RV++I+G +PTL+T QGG    
Sbjct  239  QHGRRLKDNQDPMFTLTSQDRHGVVVAGNLPTSFDQTGRVFDISGLSPTLTTMQGGDKVP  298

Query  265  KIMLRKN----------ETEYQEVKPGNSVNLAFPNSTSRRGRLGKQSVHTLLTGDQQAV  314
            KI+LR +           T Y     G+SVNLA+P+ST RRGR+GK   +TL T+D+ +V
Sbjct  299  KILLREELPFLKIKEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNMGV  358

Query  315  VTD--QY--------------------QIRKLTPRECWRLQGFPDWAFDRASQVNSDSQL  352
            V    +Y                    +IR+LTPREC RLQGFPDWAFD+A  V+S SQL
Sbjct  359  VVAALEYRQDKWYEVTGIVLEGKLYRLRIRRLTPRECFRLQGFPDWAFDKAESVSSKSQL  418

Query  353  YKQAGNSVTVPVIFDIARRLKEVKTDD  379
            YKQAGNSVTV VI  IA  ++    ++
Sbjct  419  YKQAGNSVTVTVIEAIASEFRRTEEEE  445

42) EFAU085_01892 in NC_021994


> NC_009443_P1|86|G86|146320840|YP_001200551.1|Streptococcus_suis_98HAH33|-|86097..87452|-|SSU98_0993|C-5 
cytosine-specific 
DNA methylase
Length=451

 Score =  339 bits (1272),  Expect = 2e-94, Method: Compositional matrix adjust.
 Identities = 234/447 (53%), Positives = 292/447 (66%), Gaps = 70/447 (15%)

Query  1    MTFLDLFAGIGGFCLGMEQAGHQCIGFCEIDDFARQSYKAIHDTSKEVEMHDITSVSD-E  59
            M FLDLFAGIGGF LGME  GH+C+GFCEID FAR SYKA+ +T  E+E HDI  V+D +
Sbjct  1    MKFLDLFAGIGGFRLGMESQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHD  60

Query  60   FIQSLGPVDILCGGFPCQAFSIAGKRQGFSDTRGTLFFEIARFAAILQPKFLFLENVRGL  119
            F Q  G VDI+CGGFPCQAFS+AG+R GF DTRGTLFFEIAR A  +QP+FLFLENV+GL
Sbjct  61   FRQFRGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL  120

Query  120  LNHEGGATFETILRTLDGLGYDVEWQVLNSKAY-VPQNRERIFLIGHSRDACTEQVFPII  178
            LNH+ G TF TIL TLD LGYDVEWQVLNSK + VPQNRER+F+IGHSR      +FP+ 
Sbjct  121  LNHDEGRTFATILSTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYRPRFLFPL-  179

Query  179  GSSPTSDQNIRNLLNINPSNRGMGGQVYGSDDVAPTLT--GDEGIKIALPV---------  227
                 S  ++  L NINPS+RG+ G+VY ++++APTLT   +EG KIA+PV         
Sbjct  180  -RRENSPAHLERLGNINPSKRGLNGEVYLTNGLAPTLTRGKGEGAKIAIPVLTPDRLEKR  238

Query  228  --------------------DDGISVAGMLLGNFEQGNRVYEITGTAPTLSTKQGG---T  264
                                 +G+ VAG L  +F+Q  RV++I+G +PTL+T QGG    
Sbjct  239  QHGRRLKDNQDPMFTLTSQDRHGVVVAGNLPTSFDQTGRVFDISGLSPTLTTMQGGDKVP  298

Query  265  KIMLRKN----------ETEYQEVKPGNSVNLAFPNSTSRRGRLGKQSVHTLLTGDQQAV  314
            KI+LR +           T Y     G+SVNLA+P+ST RRGR+GK   +TL T+D+ +V
Sbjct  299  KILLREELPFLKIKEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNMGV  358

Query  315  VTD--QY--------------------QIRKLTPRECWRLQGFPDWAFDRASQVNSDSQL  352
            V    +Y                    +IR+LTPREC RLQGFPDWAFD+A  V+S SQL
Sbjct  359  VVAALEYRQDKWYEVTGIVLEGKLYRLRIRRLTPRECFRLQGFPDWAFDKAESVSSKSQL  418

Query  353  YKQAGNSVTVPVIFDIARRLKEVKTDD  379
            YKQAGNSVTV VI  IA  ++    ++
Sbjct  419  YKQAGNSVTVTVIEAIASEFRRTEEEE  445

43) HMPREF0351_11823 in NC_017960


> NC_009443_P1|86|G86|146320840|YP_001200551.1|Streptococcus_suis_98HAH33|-|86097..87452|-|SSU98_0993|C-5 
cytosine-specific 
DNA methylase
Length=451

 Score =  339 bits (1272),  Expect = 2e-94, Method: Compositional matrix adjust.
 Identities = 234/447 (53%), Positives = 292/447 (66%), Gaps = 70/447 (15%)

Query  1    MTFLDLFAGIGGFCLGMEQAGHQCIGFCEIDDFARQSYKAIHDTSKEVEMHDITSVSD-E  59
            M FLDLFAGIGGF LGME  GH+C+GFCEID FAR SYKA+ +T  E+E HDI  V+D +
Sbjct  1    MKFLDLFAGIGGFRLGMESQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHD  60

Query  60   FIQSLGPVDILCGGFPCQAFSIAGKRQGFSDTRGTLFFEIARFAAILQPKFLFLENVRGL  119
            F Q  G VDI+CGGFPCQAFS+AG+R GF DTRGTLFFEIAR A  +QP+FLFLENV+GL
Sbjct  61   FRQFRGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL  120

Query  120  LNHEGGATFETILRTLDGLGYDVEWQVLNSKAY-VPQNRERIFLIGHSRDACTEQVFPII  178
            LNH+ G TF TIL TLD LGYDVEWQVLNSK + VPQNRER+F+IGHSR      +FP+ 
Sbjct  121  LNHDEGRTFATILSTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYRPRFLFPL-  179

Query  179  GSSPTSDQNIRNLLNINPSNRGMGGQVYGSDDVAPTLT--GDEGIKIALPV---------  227
                 S  ++  L NINPS+RG+ G+VY ++++APTLT   +EG KIA+PV         
Sbjct  180  -RRENSPAHLERLGNINPSKRGLNGEVYLTNGLAPTLTRGKGEGAKIAIPVLTPDRLEKR  238

Query  228  --------------------DDGISVAGMLLGNFEQGNRVYEITGTAPTLSTKQGG---T  264
                                 +G+ VAG L  +F+Q  RV++I+G +PTL+T QGG    
Sbjct  239  QHGRRLKDNQDPMFTLTSQDRHGVVVAGNLPTSFDQTGRVFDISGLSPTLTTMQGGDKVP  298

Query  265  KIMLRKN----------ETEYQEVKPGNSVNLAFPNSTSRRGRLGKQSVHTLLTGDQQAV  314
            KI+LR +           T Y     G+SVNLA+P+ST RRGR+GK   +TL T+D+ +V
Sbjct  299  KILLREELPFLKIKEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNMGV  358

Query  315  VTD--QY--------------------QIRKLTPRECWRLQGFPDWAFDRASQVNSDSQL  352
            V    +Y                    +IR+LTPREC RLQGFPDWAFD+A  V+S SQL
Sbjct  359  VVAALEYRQDKWYEVTGIVLEGKLYRLRIRRLTPRECFRLQGFPDWAFDKAESVSSKSQL  418

Query  353  YKQAGNSVTVPVIFDIARRLKEVKTDD  379
            YKQAGNSVTV VI  IA  ++    ++
Sbjct  419  YKQAGNSVTVTVIEAIASEFRRTEEEE  445

44) SPN23F_15670 in NC_011900


> NC_009443_P1|86|G86|146320840|YP_001200551.1|Streptococcus_suis_98HAH33|-|86097..87452|-|SSU98_0993|C-5 
cytosine-specific 
DNA methylase
Length=451

 Score =  329 bits (1234),  Expect = 2e-91, Method: Compositional matrix adjust.
 Identities = 221/427 (52%), Positives = 283/427 (67%), Gaps = 66/427 (15%)

Query  1    MESAGHECIGFCEIDKFARASYKAIHDTKGEIELHDITTVSDDTIRGI-GHVDVICGGFP  59
            MES GH C+GFCEIDKFAR+SYKA+ +T GEIE HDI  V+D+ +R + G+VD+ICGGFP
Sbjct  17   MESQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHDFRQFRGQVDIICGGFP  76

Query  60   CQAFSIAGNRRGFEDTRGTLFFEIARFASILKPRYLFLENVKGLLNHDRGNTFEVILSAL  119
            CQAFS+AG R GFEDTRGTLFFEIAR A  ++PR+LFLENVKGLLNHD G TF  ILS+L
Sbjct  77   CQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGLLNHDEGRTFATILSTL  136

Query  120  DELGYDVEWQVLNSKNFGVPQNRERVFIIGHLRGGSGRKVFPLSGDGAAITCEQPKINKV  179
            DELGYDVEWQVLNSK+F VPQNRERVFIIGH R    R +FPL  + ++     + ++++
Sbjct  137  DELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYRPRFLFPLRRENSP-----AHLERL  191

Query  180  GNTRKKGKSQSGDVVSIDSLAPTLCSTTTQKDPLKV----------------LIENEIKQ  223
            GN     ++ +G+V   ++LAPTL     +   + +                L +N+   
Sbjct  192  GNINPSKRGLNGEVYLTNGLAPTLTRGKGEGAKIAIPVLTPDRLEKRQHGRRLKDNQDPM  251

Query  224  F-------------GVLQPNYNQSGVVYEIDGISPTIRAYQGGNLEPKI---------RV  261
            F             G L  +++Q+G V++I G+SPT+ + QGG+  PKI         ++
Sbjct  252  FTLTSQDRHGVVVAGNLPTSFDQTGRVFDISGLSPTLTTMQGGDKVPKILLREELPFLKI  311

Query  262  KEATKQGYQEAEIGDSVNLSHPNSKTRRGRVGKQIANTLLTGESQGVVEPD---------  312
            KEATK GY  A +GDSVNL+ P+S  RRGRVGK I+NTL T+++ GVV +          
Sbjct  312  KEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGISNTLTTSDNMGVVVAALEYRQDKWY  371

Query  313  -------------FRIRKLTPRECWRLQGFPDWAFDKAQEVNSNSQLYKQAGNSVTVNVI  359
                         +RIR+LTPREC RLQGFPDWAFDKA+ V+S+SQLYKQAGNSVTV VI
Sbjct  372  EVTGIVLEGKLYRLRIRRLTPRECFRLQGFPDWAFDKAESVSSKSQLYKQAGNSVTVTVI  431

Query  360  SAIAQGL  366
             AIA  +
Sbjct  432  EAIASEF  438

45) EFD32_pB0060 in NC_018223


> NC_009443_P1|86|G86|146320840|YP_001200551.1|Streptococcus_suis_98HAH33|-|86097..87452|-|SSU98_0993|C-5 
cytosine-specific 
DNA methylase
Length=451

 Score =  309 bits (1160),  Expect = 2e-85, Method: Compositional matrix adjust.
 Identities = 231/474 (49%), Positives = 298/474 (63%), Gaps = 92/474 (19%)

Query  6    LTFLDLFSGVGGFRLGLEKAGHRCIGFCEIDAKARESYKAIHNTENEVEMHDITTISD-E  64
            + FLDLF+G+GGFRLG+E  GH+C+GFCEID  AR SYKA+ NTE E+E HDI  ++D +
Sbjct  1    MKFLDLFAGIGGFRLGMESQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHD  60

Query  65   FVRGIGRVDIIAGGFPCQAFSVAGKRKGFRDTRGTLFFEIARFAHILQPKYLFLENVKGL  124
            F +  G+VDII GGFPCQAFS+AG+R GF DTRGTLFFEIAR A  +QP++LFLENVKGL
Sbjct  61   FRQFRGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL  120

Query  125  LNHDSGATFETILRTLDELGYNVEWQVLNSKNY-VPQNRERVFIIGRLRGASTNQIFPIT  183
            LNHD G TF TIL TLDELGY+VEWQVLNSK++ VPQNRERVFIIG+ R      +FP+ 
Sbjct  121  LNHDEGRTFATILSTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYRPRFLFPLR  180

Query  184  GEESQIIFKSAKINSKGRKQQVVGNVNPSARGMNGNVFSSDAISPTITCNNGEGSKIMVP  243
             E+S   +            + +GN+NPS RG+NG+V+ +++++PT+T  +GEG+KI +P
Sbjct  181  RENSPAHL------------ERLGNINPSKRGLNGEVYLTNGLAPTLTRGKGEGAKIAIP  228

Query  244  AQSKTTHVEKR-----------------------IIVEGLLDNKFRSSSAVVSVNGLSPT  280
              +   ++EKR                       ++V G L   F  ++ V  ++GLSPT
Sbjct  229  VLT-PDRLEKRQHGRRLKDNQDPMFTLTSQDRHGVVVAGNLPTSFDQTGRVFDISGLSPT  287

Query  281  LTTMGGGGQEPKILVR---------EATKEGYSEAGPGDSINFAFPNSKKRRGRVGKKYA  331
            LTTM GG++ PKIL+R         EATK GY+ A  GDS+N+A+P+S KRRGRVGK  +
Sbjct  288  LTTMQGGDKVPKILLREELPFLKIKEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGIS  347

Query  332  HTLLTGDQQAVVTEDFQ----------------------IRRLTPMECWRLQAFPDEAFL  369
            +TL T+D+ +VV   ++                      IRRLTP EC RLQ+FPD AF 
Sbjct  348  NTLTTSDNMGVVVAALEYRQDKWYEVTGIVLEGKLYRLRIRRLTPRECFRLQGFPDWAFD  407

Query  370  AAKFGSREIAKIIIENKLDHYHCEYEQKMSDSSLYKQAGNSVTVAVIYDIAKRF  423
             A                       E   S S LYKQAGNSVTV+VI  IA  F
Sbjct  408  KA-----------------------ESVSSKSQLYKQAGNSVTVTVIEAIASEF  438

46) Bsph_3739 in NC_010382


> NC_009443_P1|86|G86|146320840|YP_001200551.1|Streptococcus_suis_98HAH33|-|86097..87452|-|SSU98_0993|C-5 
cytosine-specific 
DNA methylase
Length=451

 Score =  304 bits (1140),  Expect = 6e-84, Method: Compositional matrix adjust.
 Identities = 219/448 (49%), Positives = 289/448 (65%), Gaps = 46/448 (10%)

Query  1    MQFLDFFAGIGGFRLGMEQAGHTCAGYVEWDKFARKSYEAIHNTEGEWTAHDITTVSDEE  60
            M+FLD+FAGIGGFRLGME  GH C G+ E DKFAR SY A+ NTEGE   HDI  V+D++
Sbjct  1    MKFLDLFAGIGGFRLGMESQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHD  60

Query  61   FSKFRGTVDIICGGFPCQAFSVAGKRQGFEDTRGTLFFEVARAAKQIQPRYLFLENVKGL  120
            F +FRG VDIICGGFPCQAFS+AG+R GFEDTRGTLFFE+ARAAKQIQPR+LFLENVKGL
Sbjct  61   FRQFRGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL  120

Query  121  LSHDKGKTFGIILDTLDELGYDVEWQVLNTKDFSTKERPTPQNRERIFIVGHLRGTSTRE  180
            L+HD G+TF+ IL TLDELGYDVEWQVLN+KDF       PQNRER+FI+GH R    R 
Sbjct  121  LNHDEGRTFATILSTLDELGYDVEWQVLNSKDF-----QVPQNRERVFIIGHSRRYRPRF  175

Query  181  VFPIGRESEGSNSKSKIKIFGSTQKNINTTLSQRELVYDSDGVVGSLMATDAKNPK-QVV  239
            +FP+ RE+  ++   ++  + ++++ +N        VY ++G+  +L    +  +K  + 
Sbjct  176  LFPLRRENSPAHL-ERLGNINPSKRGLNGE------VYLTNGLAPTLTRGKGEGAKIAIP  228

Query  240  IRTVGKLPGKHEQTNRVYHVKGLSPTLTQPPVPKICLPVLTPDRIEKRQNGRRIKGPDEP  299
            + T ++L  K+++  R+ + ++   TLT      + ++   P  +++      I G    
Sbjct  229  VLTPDRL-EKRQHGRRLKDNQDPMFTLTSQDRHGVVVAGNLPTSFDQTGRVFDISGLSPT  287

Query  300  MFTITAQNRHG----------VAIKEATTKGYDVAYPGDSVNFSVPNSTTRRGRVGKGIA  349
            + T+ + ++            + IKEAT  GY  A  GDSVN++ P+ST RRGRVGKGI+
Sbjct  288  LTTMQGGDKVPKILLREELPFLKIKEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGIS  347

Query  350  NTLDTGCQQGVLTDE----------------------FRIRRLTPLECWRLQGFPDEAFK  387
            NTL T+ + GV+                         +RIRRLTP EC RLQGFPD AF 
Sbjct  348  NTLTTSDNMGVVVAALEYRQDKWYEVTGIVLEGKLYRLRIRRLTPRECFRLQGFPDWAFD  407

Query  388  KATDVNSDSQLYKQAGNSVSVPVIYEIA  415
            KA  V+S SQLYKQAGNSV+V VI  IA
Sbjct  408  KAESVSSKSQLYKQAGNSVTVTVIEAIA  435

47) LMHCC_1402 in NC_011660


> NC_009443_P1|86|G86|146320840|YP_001200551.1|Streptococcus_suis_98HAH33|-|86097..87452|-|SSU98_0993|C-5 
cytosine-specific 
DNA methylase
Length=451

 Score =  296 bits (1109),  Expect = 1e-81, Method: Compositional matrix adjust.
 Identities = 184/341 (54%), Positives = 242/341 (71%), Gaps = 15/341 (4%)

Query  1    MKFLDLFAGIGGFRLGMERAGHECVGYVEIDKSPRKSYQAIHDTEGEWTREDITKVTDEE  60
            MKFLDLFAGIGGFRLGME  GH C+G+ EIDK +R SY+A+ +TEGE   +DI  VTD++
Sbjct  1    MKFLDLFAGIGGFRLGMESQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHD  60

Query  61   WRTLRGTVDIICGGFPCQSFSIAGKRLGFEETRGTLFFEIARAAKQIQPRYLFLENVKGL  120
             R +RG VDIICGGFPCQ+FS+AG+RLGFE+TRGTLFFEIARAAKQIQPR+LFLENVKGL
Sbjct  61   FRQFRGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL  120

Query  121  LSHNKGETFATILTALHELGYDAEWQILNSKDFGVPQNRERVFIIGHLRGAGGREIFPLA  180
            L+H+ G TFATIL++L+ELGYD EWQ+LNSKDF VPQNRERVFIIGH R    R +FPL 
Sbjct  121  LNHDEGRTFATILSTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYRPRFLFPLR  180

Query  181  EASRTADESRVIANTLTARYPYSQREGTYIET------TRKSEQ----VMPVLTPDRIIK  230
              +  A+  R+     + R   +     Y+        TR   +     +PVLTPDR+ K
Sbjct  181  RENSPAHLERLGNINPSKR---GLNGEVYLTNGLAPTLTRGKGEGAKIAIPVLTPDRLEK  237

Query  231  RQNGRRFKTLGEPAFTLTAQDQHGIIVFGELEGSGREQSNRIYSEKGLAPTLTTMQGGGQ  290
            RQ+GRR+K   +P FTLT+QD+HG++V G+L  ++ +Q+ R++   GL+PTLTTMQGG++
Sbjct  238  RQHGRRLKDNQDPMFTLTSQDRHGVVVAGNL-PTSFDQTGRVFDISGLSPTLTTMQGGDK  296

Query  291  EPKIAIVGNVNPSK-RGMNGEVYSSEGLAPTLTTNKGEGQK  330
             PKI +  ++   K +      Y+   L+ ++     ++ K
Sbjct  297  VPKILLREELPFLKIKEATKTGYAKATLGDSVNLAYPDSTK  337

48) LMM7_1254 in NC_017537


> NC_009443_P1|86|G86|146320840|YP_001200551.1|Streptococcus_suis_98HAH33|-|86097..87452|-|SSU98_0993|C-5 
cytosine-specific 
DNA methylase
Length=451

 Score =  296 bits (1109),  Expect = 1e-81, Method: Compositional matrix adjust.
 Identities = 184/341 (54%), Positives = 242/341 (71%), Gaps = 15/341 (4%)

Query  1    MKFLDLFAGIGGFRLGMERAGHECVGYVEIDKSPRKSYQAIHDTEGEWTREDITKVTDEE  60
            MKFLDLFAGIGGFRLGME  GH C+G+ EIDK +R SY+A+ +TEGE   +DI  VTD++
Sbjct  1    MKFLDLFAGIGGFRLGMESQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHD  60

Query  61   WRTLRGTVDIICGGFPCQSFSIAGKRLGFEETRGTLFFEIARAAKQIQPRYLFLENVKGL  120
             R +RG VDIICGGFPCQ+FS+AG+RLGFE+TRGTLFFEIARAAKQIQPR+LFLENVKGL
Sbjct  61   FRQFRGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRFLFLENVKGL  120

Query  121  LSHNKGETFATILTALHELGYDAEWQILNSKDFGVPQNRERVFIIGHLRGAGGREIFPLA  180
            L+H+ G TFATIL++L+ELGYD EWQ+LNSKDF VPQNRERVFIIGH R    R +FPL 
Sbjct  121  LNHDEGRTFATILSTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYRPRFLFPLR  180

Query  181  EASRTADESRVIANTLTARYPYSQREGTYIET------TRKSEQ----VMPVLTPDRIIK  230
              +  A+  R+     + R   +     Y+        TR   +     +PVLTPDR+ K
Sbjct  181  RENSPAHLERLGNINPSKR---GLNGEVYLTNGLAPTLTRGKGEGAKIAIPVLTPDRLEK  237

Query  231  RQNGRRFKTLGEPAFTLTAQDQHGIIVFGELEGSGREQSNRIYSEKGLAPTLTTMQGGGQ  290
            RQ+GRR+K   +P FTLT+QD+HG++V G+L  ++ +Q+ R++   GL+PTLTTMQGG++
Sbjct  238  RQHGRRLKDNQDPMFTLTSQDRHGVVVAGNL-PTSFDQTGRVFDISGLSPTLTTMQGGDK  296

Query  291  EPKIAIVGNVNPSK-RGMNGEVYSSEGLAPTLTTNKGEGQK  330
             PKI +  ++   K +      Y+   L+ ++     ++ K
Sbjct  297  VPKILLREELPFLKIKEATKTGYAKATLGDSVNLAYPDSTK  337

49) EF2340 in NC_004668


> NC_009443_P1|86|G86|146320840|YP_001200551.1|Streptococcus_suis_98HAH33|-|86097..87452|-|SSU98_0993|C-5 
cytosine-specific 
DNA methylase
Length=451

 Score =  266 bits (994),  Expect = 1e-72, Method: Compositional matrix adjust.
 Identities = 188/396 (48%), Positives = 246/396 (63%), Gaps = 70/396 (17%)

Query  3    DITSVSD-EFIQSLGPVDILCGGFPCQAFSIAGKRQGFSDTRGTLFFEIARFAALLQPKF  61
            DI  V+D +F Q  G VDI+CGGFPCQAFS+AG+R GF DTRGTLFFEIAR A  +QP+F
Sbjct  52   DIKEVTDHDFRQFRGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAKQIQPRF  111

Query  62   LFLENVRGLLNHEGGATFETILRTLDGLGYDVEWQVLNSKAY-VPQSRERVFLIGHSRDI  120
            LFLENV+GLLNH+ G TF TIL TLD LGYDVEWQVLNSK + VPQ+RERVF+IGHSR  
Sbjct  112  LFLENVKGLLNHDEGRTFATILSTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRY  171

Query  121  CTEQVFPIIESSATSDQNLRNLLNTNPSNRGMSEQVYGSDEFAPTVT--GDEGIKIALPV  178
                +FP+      S  +L  L N NPS+RG++ +VY ++ +APT+T   +EG KIA+PV
Sbjct  172  RPRFLFPL--RRENSPAHLERLGNINPSKRGLNGEVYLTNGLAPTLTRGKGEGAKIAIPV  229

Query  179  -----------------------------NDGISVVGMLPGNFEQGNRIYEVTGTAPTLS  209
                                          +G+ V G LP +F+Q  R+++++G +PTL+
Sbjct  230  LTPDRLEKRQHGRRLKDNQDPMFTLTSQDRHGVVVAGNLPTSFDQTGRVFDISGLSPTLT  289

Query  210  TKQGG---TKIMIRKN----------KIEYQEVKPEGSVNLAFPHSKSRRGRLEKQSVHT  256
            T QGG    KI++R +          K  Y      +SVNLA+P+S  RRGR+ K   +T
Sbjct  290  TMQGGDKVPKILLREELPFLKIKEATKTGYAKATLGDSVNLAYPDSTKRRGRVGKGISNT  349

Query  257  LLTGDQQAVITD--QY--------------------QIRKLTPRECWRLQGFPDWTFDRA  294
            L T+D+ +V+    +Y                    +IR+LTPREC RLQGFPDW+FD+A
Sbjct  350  LTTSDNMGVVVAALEYRQDKWYEVTGIVLEGKLYRLRIRRLTPRECFRLQGFPDWAFDKA  409

Query  295  SQVNSDSQLYKQAGNSVTVPVIFDIAKRLKEVKTDD  330
              V+S SQLYKQAGNSVTV VI  IA  ++    ++
Sbjct  410  ESVSSKSQLYKQAGNSVTVTVIEAIASEFRRTEEEE  445

50) Clocel_0773 in NC_014393


> NC_009443_P1|86|G86|146320840|YP_001200551.1|Streptococcus_suis_98HAH33|-|86097..87452|-|SSU98_0993|C-5 
cytosine-specific 
DNA methylase
Length=451

 Score =  190 bits (705),  Expect = 2e-49, Method: Compositional matrix adjust.
 Identities = 146/352 (42%), Positives = 205/352 (59%), Gaps = 80/352 (22%)

Query  4    MTFLDFCAGIGGFRLGLELTGHKCIGFCEKDKFAVKSYKAMFETEGEWYANDITELKSDE  63
            M FLD+ AGIGGFRLG+E  GHKC+GFCE DKFA  SYKAMF+TEGE   +DI E+  ++
Sbjct  1    MKFLDLFAGIGGFRLGMESQGHKCLGFCEIDKFARTSYKAMFNTEGEIEYHDIKEVTDHD  60

Query  64   I-PY---ADIWCFGFPCQDISVAGKQRGIRGKRSGIYFRIIDLIKGKEEKAKPTYLLIEN  119
            +  +    DI C GFPCQ +S+AG++ G+ + R+ ++F I    K    + +P +L++EN
Sbjct  61   FRQFRGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARAAK----QIQPRFLFLEN  116

Query  120  VKNLLSINNGFDFATVLLELDQAGYDARWQVLNSKDFGVPQNRERVFIIASLRSRGRREI  179
            VK LL+ ++G  FAT+L  LD+ GYD  WQVLNSKDF VPQNRERVFII+  R    R +
Sbjct  117  VKGLLNHDEGRTFATILSTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYRPRFL  176

Query  180  LPIGGENRATLKQIIGVCQGERVYDSEgvactltgcgggggaktglYCVGNINPSGNGMN  239
            +P        L++  +  + ER                          +GNINPS  G+N
Sbjct  177  FP--------LRRENSPAHLER--------------------------LGNINPSKRGLN  202

Query  240  GNVYSAEGIAPTVTVNKGQGSKIFIDQSNTKPQLTDISRCITSRYTGGVVNRTAMNSAVL  299
            G+VY ++G+APT+T  KG+G+KI                                     
Sbjct  203  GEVYLTNGLAPTLTRGKGEGAKI-------------------------------------  225

Query  300  EAYPVLTPERVDKRQNGRRMKEYNEPMFTLTSQDRHGIAIKNATKKGYVEAN  351
             A PVLTP+R++KRQ+GRR+K+ ++PMFTLTSQDRHG+ +      ++ ++ 
Sbjct  226  -AIPVLTPDRLEKRQHGRRLKDNQDPMFTLTSQDRHGVVVAGNLPTSFDQTG  276