Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
invasion-associated secreted protein. |
NC_003198 (Salmonella enterica CT18) |
4e-110 |
100 |
|
invasion-associated secreted protein |
NC_004631 (Salmonella enterica Ty2) |
4e-110 |
100 |
|
invasion-associated secreted protein |
NC_021176 (Salmonella enterica Ty21a) |
4e-110 |
100 |
|
invasion-associated secreted protein |
NC_011147 (Salmonella enterica AKU12601) |
8e-110 |
99 |
|
invasion-associated secreted protein |
NC_006511 (Salmonella enterica ATCC 9150) |
8e-110 |
99 |
|
type III secretion protein SopE |
NC_020307 (Salmonella enterica CFSAN001992) |
4e-109 |
99 |
|
guanine nucleotide exchange factor SopE |
NC_011094 (Salmonella enterica CVM19633) |
4e-109 |
99 |
|
invasion-associated secreted protein |
NC_016810 (Salmonella enterica SL1344) |
4e-109 |
99 |
|
invasion-associated secreted protein |
NC_016857 (Salmonella enterica ST4/74) |
4e-109 |
99 |
|
type III secretion protein SopE |
NC_021810 (Salmonella enterica 41578) |
2e-108 |
99 |
|
type III secretion protein SopE |
NC_021812 (Salmonella enterica CFSAN002069) |
2e-108 |
99 |
|
guanine nucleotide exchange factor SopE |
NC_011083 (Salmonella enterica SL476) |
2e-108 |
99 |
|
type III secretion system, secreted effector protein SopE |
NC_011294 (Salmonella enterica P125109) |
2e-98 |
91 |
|
guanine nucleotide exchange factor SopE |
NC_011205 (Salmonella enterica CT_02021853) |
3e-98 |
90 |
|
type III secretion system, effector protein SopE |
NC_011274 (Salmonella enterica 287/91) |
6e-98 |
90 |
|
type III secretion system, secreted effector protein (SopE) |
NC_016831 (Salmonella enterica RKS5078) |
6e-98 |
90 |
|
type III secretion protein SopE |
NC_021984 (Salmonella enterica S06004) |
6e-98 |
90 |
|
type III secretion protein SopE |
NC_021818 (Salmonella enterica CFSAN002050) |
9e-97 |
88 |
|
hypothetical protein |
NC_021820 (Salmonella enterica 08-1736) |
4e-82 |
70 |
|
type III-secreted effector protein |
NC_016856 (Salmonella enterica 14028S) |
4e-82 |
70 |
|
invasion-associated effector protein |
NC_011274 (Salmonella enterica 287/91) |
4e-82 |
70 |
|
guanine nucleotide exchange factor SopE |
NC_022241 (Salmonella enterica 3114) |
4e-82 |
70 |
|
type III secretion protein SopE2 |
NC_021810 (Salmonella enterica 41578) |
4e-82 |
70 |
|
invasion-associated secreted effector protein |
NC_022221 (Salmonella enterica CDC1983-67) |
4e-82 |
70 |
|
hypothetical protein |
NC_021844 (Salmonella enterica CFSAN000189) |
4e-82 |
70 |
|
hypothetical protein |
NC_021814 (Salmonella enterica CFSAN001921) |
4e-82 |
70 |
|
hypothetical protein |
NC_021812 (Salmonella enterica CFSAN002069) |
4e-82 |
70 |
|
guanine nucleotide exchange factor SopE |
NC_011205 (Salmonella enterica CT_02021853) |
4e-82 |
70 |
|
invasion-associated secreted effector protein (sopE2) |
NC_016854 (Salmonella enterica D23580) |
4e-82 |
70 |
|
type III-secreted effector protein |
NC_003197 (Salmonella enterica LT2) |
4e-82 |
70 |
|
invasion-associated secreted effector protein (sopE2) |
NC_016831 (Salmonella enterica RKS5078) |
4e-82 |
70 |
|
hypothetical protein |
NC_021984 (Salmonella enterica S06004) |
4e-82 |
70 |
|
invasion-associated secreted effector protein (sopE2) |
NC_016810 (Salmonella enterica SL1344) |
4e-82 |
70 |
|
guanine nucleotide exchange factor SopE |
NC_011080 (Salmonella enterica SL254) |
4e-82 |
70 |
|
guanine nucleotide exchange factor SopE |
NC_011083 (Salmonella enterica SL476) |
4e-82 |
70 |
|
type III-secreted effector protein |
NC_016857 (Salmonella enterica ST4/74) |
4e-82 |
70 |
|
guanine nucleotide exchange factor SopE |
NC_016860 (Salmonella enterica T000240) |
4e-82 |
70 |
|
type III secretion protein SopE2 |
NC_021151 (Salmonella enterica U288) |
4e-82 |
70 |
|
type III-secreted effector protein |
NC_016863 (Salmonella enterica UK-1) |
4e-82 |
70 |
|
invasion-associated secreted effector protein (sopE2) |
NC_011294 (Salmonella enterica P125109) |
1e-81 |
70 |
|
guanine nucleotide exchange factor SopE |
NC_011149 (Salmonella enterica SL483) |
2e-81 |
68 |
|
type III-secreted protein effector: invasion-associated protein |
NC_011147 (Salmonella enterica AKU12601) |
4e-81 |
68 |
|
Type III-secreted protein effector: invasion-associated protein |
NC_006511 (Salmonella enterica ATCC 9150) |
4e-81 |
68 |
|
invasion-associated type III-secreted protein effector |
NC_006905 (Salmonella enterica SC-B67) |
4e-81 |
69 |
|
hypothetical protein |
NC_010102 (Salmonella enterica SGSC4150; SPB7) |
4e-81 |
69 |
|
hypothetical protein |
NC_021818 (Salmonella enterica CFSAN002050) |
5e-81 |
68 |
|
hypothetical protein |
NC_010067 (Salmonella enterica RSK2980) |
6e-81 |
70 |
|
guanine nucleotide exchange factor SopE |
NC_011094 (Salmonella enterica CVM19633) |
1e-80 |
70 |
|
type III secretion protein SopE2 |
NC_020307 (Salmonella enterica CFSAN001992) |
2e-80 |
69 |
|
Type III secretion system SopE |
NC_017623 (Salmonella enterica B182) |
6e-76 |
72 |
|
invasion-associated type III secreted effector protein |
NC_015761 (Salmonella bongori NCTC 12419) |
2e-68 |
63 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='NC_003198_P9' AND ph.id_pai_orf='86' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc