Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
transposase |
NC_011353 (Escherichia coli EC4115) |
5e-32 |
100 |
|
hypothetical protein |
NC_002655 (Escherichia coli EDL933) |
5e-32 |
100 |
|
hypothetical protein |
NC_002655 (Escherichia coli EDL933) |
5e-32 |
100 |
|
transposase |
NC_013008 (Escherichia coli TW14359) |
5e-32 |
100 |
|
hypothetical protein |
NC_017641 (Escherichia coli UMNK88) |
5e-32 |
100 |
|
partial transposase |
NC_004431 (Escherichia coli CFT073) |
1e-25 |
100 |
|
transposase-like protein |
NC_017663 (Escherichia coli P12b) |
1e-25 |
100 |
|
IS629 ORF2 |
NC_017319 (Shigella flexneri 2002017) |
3e-25 |
98 |
|
IS629 ORF2 |
NC_004851 (Shigella flexneri 301) |
3e-25 |
98 |
|
IS629 orfB |
NC_004741 (Shigella flexneri 2457T) |
1e-24 |
98 |
|
partial transposase |
NC_004431 (Escherichia coli CFT073) |
8e-25 |
96 |
|
hypothetical protein |
NC_015458 (Pusillimonas sp. T7-7) |
3e-17 |
65 |
|
transposase |
NC_018286 (Phaeobacter gallaeciensis 2.10) |
4e-17 |
64 |
|
transposase |
NC_010170 (Bordetella petrii DSM 12804) |
7e-17 |
54 |
|
putative IS401 transposase subunit |
NC_012695 (Burkholderia pseudomallei MSHR346) |
2e-16 |
60 |
|
transposase subunit; putative |
NC_009656 (Pseudomonas aeruginosa PA7) |
2e-15 |
58 |
|
transposase |
NC_014215 (Propionibacterium freudenreichii CIRM-BIA1) |
1e-11 |
50 |
|
hypothetical protein |
NC_007204 (Psychrobacter arcticus 273-4) |
1e-11 |
49 |
|
IS994 |
NC_010168 (Renibacterium salmoninarum ATCC 33209) |
2e-11 |
56 |
|
IS994 |
NC_010168 (Renibacterium salmoninarum ATCC 33209) |
7e-11 |
54 |
|
transposase-like protein |
NC_016783 (Corynebacterium diphtheriae INCA 402) |
7e-11 |
57 |
|
integrase family protein |
NC_015145 (Arthrobacter phenanthrenivorans Sphe3) |
1e-10 |
50 |
|
integrase catalytic subunit |
NC_016948 (Mycobacterium intracellulare MOTT-64) |
2e-09 |
43 |
|
hypothetical protein |
NC_007204 (Psychrobacter arcticus 273-4) |
2e-09 |
50 |
|
putative transposase for insertion sequenceelement IS986/IS6110 |
NC_017999 (Bifidobacterium bifidum BGN4) |
2e-08 |
46 |
|
transposase subunit B |
NC_013714 (Bifidobacterium dentium Bd1) |
3e-08 |
48 |
|
transposase |
NC_014616 (Bifidobacterium bifidum S17) |
1e-07 |
44 |
|
putative transposase |
NC_012520 (Rhodococcus opacus B4) |
9e-06 |
43 |
|
transposase for insertion sequence element |
NC_020302 (Corynebacterium halotolerans YIM 70093) |
0.001 |
41 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='NC_002655_P1' AND ph.id_pai_orf='86' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc