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Homologs of z1226 gene of AJ488511

DNA-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) ROD_49621
( - )

NC_013716
(Citrobacter rodentium ICC168)

0.0

92.4

2) ROD_10891
( - )

NC_013716
(Citrobacter rodentium ICC168)

e-196

87.3

3) G2583_4403
( - )

NC_013941
(Escherichia coli CB9615)

e-136

86.1

4) ECSP_4659
( - )

NC_013008
(Escherichia coli TW14359)

e-136

85.9

• Sequence Alignments

1) ROD_49621 in NC_013716


>AJ488511|84|G78|24528062|CAD33792.1|Escherichia_coli_536|+|75922..76767|z1226|-|Z1226 
          Length = 846

 Score = 1331 bits (3434), Expect = 0.0
 Identities = 716/775 (92%)
 Strand = Plus / Plus

Query: 1   atgtcagatatcacaatctcccgcccggaactggtcaacgggcatacggacgttatctgc 60
           |||||||| ||||| |||||||| |||||| || |||| || ||||||||||||||||||
Sbjct: 1   atgtcagacatcaccatctcccgtccggaagtgctcaatggacatacggacgttatctgc 60

Query: 61  tcaaccagtatccgccacattctggctgtacgaaagagtacgttgctgcaaatcgacaca 120
           ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct: 61  tcaaccagtatccgccacattctggctgtacgaaagagtgcgctgctgcaaatcgacaca 120

Query: 121 cttacccggcaactggtagaaatctcagcaatgacagaaagtattggcggtaaaaccgca 180
           |||| ||||||||||| ||||||||||| | |||||||||||||||| ||||||||||| 
Sbjct: 121 cttatccggcaactggcagaaatctcagtactgacagaaagtattggaggtaaaaccgcc 180

Query: 181 ctggactgggcgatgaaacaggattttcgctgcggttgctggctgatggaaaaacctgaa 240
           ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 181 ctggactgggcgatgaaacaggattttcgctgcggctgctggctgatggagaaacctgaa 240

Query: 241 acggcaatgaaagccatcacccgcaatctcgatcgcgaaatctggcgtgacctgatgcaa 300
           || ||||||||||| ||||| |||||||||||||| |||||||||||||||||||| |||
Sbjct: 241 accgcaatgaaagctatcacacgcaatctcgatcgtgaaatctggcgtgacctgatacaa 300

Query: 301 cgttcctggatgctgtcattaatggatgcgcaggcccgtgatacatggtaccggtcactg 360
           |||||| ||||||| || ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 301 cgttccgggatgctttccttaatggatgcacaggcccgtgatacatggtaccggtcactg 360

Query: 361 gagtacgataattttccggaaattagcgaagcgaacattctgagcacatttgaacaactg 420
           || || ||||||||||||||||| ||||| ||||| || |||||||||||||||||||||
Sbjct: 361 gaatatgataattttccggaaatcagcgaggcgaatatcctgagcacatttgaacaactg 420

Query: 421 caccagaacaaggatgaggtgtttgagcgaggagtggtcaacgtcttcaggggactgagc 480
           |||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||
Sbjct: 421 caccagaataaggatgaggtgtttgagcgaggggtgatcaacgtcttcaggggactgagc 480

Query: 481 tagaattacaaaactaattcaccctgcaaatttggcagtaaaattatcgtcaacaacctg 540
           | |||||||||||| ||||  |||||||||||||||||||||||||||||||||||||| 
Sbjct: 481 tggaattacaaaaccaattgcccctgcaaatttggcagtaaaattatcgtcaacaaccta 540

Query: 541 gtgaggtgggaccggtggggatttcatcttatcaccgggcaacaggcagaccgacttgcc 600
           |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 541 gtgaggtgggaccggtgggggtttcatcttatcaccgggcaacaggcagatcgacttgcc 600

Query: 601 gacctggaaagaatgctgcatctgttcagcggcaaaccgatccccgacaaccgggaaaac 660
           || |||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gatctggaaagaatgctacacctgttcagcggcaaaccgatccccgacaaccgggaaaac 660

Query: 661 atcactattcatctggatgagcacatccggtctgttcagggtaaagagtgctatgaagat 720
           |||||  ||| ||||||||| ||||||| ||| |||||||||||||||||||||||||||
Sbjct: 661 atcacccttcgtctggatgatcacatccagtccgttcagggtaaagagtgctatgaagat 720

Query: 721 gaaatgttcagaattaaatactttaagaagggatctgcacacatcactttcaaaa 775
           || |||||||| || | ||||||||||||||| || || |||||||| |||||||
Sbjct: 721 gagatgttcagcatcagatactttaagaagggctccgcgcacatcacgttcaaaa 775

2) ROD_10891 in NC_013716


>AJ488511|84|G78|24528062|CAD33792.1|Escherichia_coli_536|+|75922..76767|z1226|-|Z1226 
          Length = 846

 Score = 682 bits (1761), Expect = e-196
 Identities = 395/455 (87%)
 Strand = Plus / Plus

Query: 1   atgtcagatatcacaatctccagtctggaagtggtcaacgggcatacggatgttatctgc 60
           |||||||| ||||| |||||| ||| ||||||| |||| || |||||||| |||||||||
Sbjct: 1   atgtcagacatcaccatctcccgtccggaagtgctcaatggacatacggacgttatctgc 60

Query: 61  tccaccagtatccgacacgttgtgacggtacggaatatagcactgcaacaaaccgaagcg 120
           || ||||||||||| ||| || || | ||||| || |  || ||||  |||| |||  | 
Sbjct: 61  tcaaccagtatccgccacattctggctgtacgaaagagtgcgctgctgcaaatcgacaca 120

Query: 121 cttatccggcaactggcagaaaactcagcactgacagaaatgattggaggtaaaaccgcc 180
           |||||||||||||||||||||| ||||| |||||||||||  ||||||||||||||||||
Sbjct: 121 cttatccggcaactggcagaaatctcagtactgacagaaagtattggaggtaaaaccgcc 180

Query: 181 ctggactgggccgatgaaacaggattttcgctgtggctgctggctgacggagaaacctga 240
           ||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct: 181 ctggactgggc-gatgaaacaggattttcgctgcggctgctggctgatggagaaacctga 239

Query: 241 aaccgcgatgaaaaccatcacctggaatctcgaccgtgaaatctggcgtgacctgatgca 300
           |||||| |||||| | |||||  | |||||||| ||||||||||||||||||||||| ||
Sbjct: 240 aaccgcaatgaaagctatcacacgcaatctcgatcgtgaaatctggcgtgacctgataca 299

Query: 301 acgttccgggatgctgagtctgatggatgcacaggacggcgatacatggcagcggtcact 360
           |||||||||||||||     | ||||||||||||| | | ||||||||| | ||||||||
Sbjct: 300 acgttccgggatgctttccttaatggatgcacaggcccgtgatacatggtaccggtcact 359

Query: 361 ggagtacgataattttccggaaatcagtgaagagaatatcctgagcagatttgaacaact 420
           ||| || |||||||||||||||||||| || | |||||||||||||| ||||||||||||
Sbjct: 360 ggaatatgataattttccggaaatcagcgaggcgaatatcctgagcacatttgaacaact 419

Query: 421 gcaccagagcagggatgaggtgtttgagcgagggg 455
           ||||||||  | |||||||||||||||||||||||
Sbjct: 420 gcaccagaataaggatgaggtgtttgagcgagggg 454


 Score = 578 bits (1492), Expect = e-165
 Identities = 321/366 (88%)
 Strand = Plus / Plus

Query: 461 caacgttttcaggggactaagctgggattacaaaaccaacacaccctgtaaatttggcag 520
           |||||| ||||||||||| |||||| |||||||||||||    ||||| |||||||||||
Sbjct: 459 caacgtcttcaggggactgagctggaattacaaaaccaattgcccctgcaaatttggcag 518

Query: 521 taaaattatcgtcaacaatctggtgagatgggaccggtggggatttcatcttatcaccgg 580
           |||||||||||||||||| || ||||| |||||||||||||| |||||||||||||||||
Sbjct: 519 taaaattatcgtcaacaacctagtgaggtgggaccggtgggggtttcatcttatcaccgg 578

Query: 581 gcaacaggccgaccgacttgccgatctggaaagaatactgcatctgttcagcaataaacc 640
           ||||||||| || ||||||||||||||||||||||| || || |||||||||   |||||
Sbjct: 579 gcaacaggcagatcgacttgccgatctggaaagaatgctacacctgttcagcggcaaacc 638

Query: 641 agtccccgattgcagggaaaacatcaccattcatctggatgaccacatccagtctgttca 700
             |||||||   | |||||||||||||| ||| ||||||||| ||||||||||| |||||
Sbjct: 639 gatccccgacaaccgggaaaacatcacccttcgtctggatgatcacatccagtccgttca 698

Query: 701 gggtaaagagtgctatgaagatgagatgttcatcattaaatattttaagaagggctccgc 760
           |||||||||||||||||||||||||||||||| ||| | ||| |||||||||||||||||
Sbjct: 699 gggtaaagagtgctatgaagatgagatgttcagcatcagatactttaagaagggctccgc 758

Query: 761 gcatatcacgttcaggaaaccagaactggttgacagattgaatgctattatcgcaaaaca 820
           ||| ||||||||||  || | |||||||||||||||  ||||||  ||||| |||| |||
Sbjct: 759 gcacatcacgttcaaaaatcaagaactggttgacaggctgaatgacattattgcaagaca 818

Query: 821 ctatcc 826
           ||||||
Sbjct: 819 ctatcc 824

3) G2583_4403 in NC_013941


>AJ488511|84|G78|24528062|CAD33792.1|Escherichia_coli_536|+|75922..76767|z1226|-|Z1226 
          Length = 846

 Score = 482 bits (1244), Expect = e-136
 Identities = 266/299 (89%)
 Strand = Plus / Plus

Query: 175 aaaaccgccctggaccgggcgatgaaacaggattttcactgcggctgctggctgatggag 234
           ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 172 aaaaccgccctggactgggcgatgaaacaggattttcgctgcggctgctggctgatggag 231

Query: 235 aaacctgaaaccgcaatgaaagccatcacccgcaacctcgactgcgaaatctggcgtgac 294
           ||||||||||||||||||||||| ||||| ||||| |||||  | |||||||||||||||
Sbjct: 232 aaacctgaaaccgcaatgaaagctatcacacgcaatctcgatcgtgaaatctggcgtgac 291

Query: 295 ctgatgcaacgctccgggatgctgagtctgatggatgcacagggctaggatacatggtac 354
           ||||| ||||| |||||||||||     | ||||||||||||| |   ||||||||||||
Sbjct: 292 ctgatacaacgttccgggatgctttccttaatggatgcacaggcccgtgatacatggtac 351

Query: 355 cgctcactggagtacgataatattccggaaatcagcgaggcgaatatcatgaatgcattc 414
           || |||||||| || |||||| |||||||||||||||||||||||||| |||   |||| 
Sbjct: 352 cggtcactggaatatgataattttccggaaatcagcgaggcgaatatcctgagcacattt 411

Query: 415 aaacaactgcaccagagtaaggatgaagtgtttgagcgtggggtgatcaacgtcttcag 473
            ||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 412 gaacaactgcaccagaataaggatgaggtgtttgagcgaggggtgatcaacgtcttcag 470


 Score = 338 bits (873), Expect = 5e-93
 Identities = 198/238 (83%)
 Strand = Plus / Plus

Query: 484 ggaattacaaaaccaattccccctgtaaattcggcagtaaaattatcgtcaacaacttgg 543
           |||||||||||||||||| |||||| ||||| |||||||||||||||||||||||| | |
Sbjct: 482 ggaattacaaaaccaattgcccctgcaaatttggcagtaaaattatcgtcaacaacctag 541

Query: 544 tgagatggtacagatggagatttcatcttatcagtggaatgcaggcagatcgcttagctg 603
           |||| ||| || | ||| | |||||||||||||  ||    |||||||||||  | || |
Sbjct: 542 tgaggtgggaccggtgggggtttcatcttatcaccgggcaacaggcagatcgacttgccg 601

Query: 604 acctggaaagaatgttgcatctgctcagcggtaaaccgctccccaacaaccgagggaata 663
           | |||||||||||| | || ||| ||||||| |||||| ||||| ||||||| |  || |
Sbjct: 602 atctggaaagaatgctacacctgttcagcggcaaaccgatccccgacaaccgggaaaaca 661

Query: 664 tcaccattaatctggatgaccacctacagtccgttcagggtaaagagcgctatgaaga 721
           ||||| ||  ||||||||| ||| | ||||||||||||||||||||| ||||||||||
Sbjct: 662 tcacccttcgtctggatgatcacatccagtccgttcagggtaaagagtgctatgaaga 719


 Score = 216 bits (556), Expect = 4e-56
 Identities = 131/157 (83%)
 Strand = Plus / Plus

Query: 1   atgtcaggcatcataatctcccgtccggaagtggacaccgggcatacggacgttatctgc 60
           ||||||| |||||  ||||||||||||||||||  ||  || ||||||||||||||||||
Sbjct: 1   atgtcagacatcaccatctcccgtccggaagtgctcaatggacatacggacgttatctgc 60

Query: 61  tccaccagtatccgacacgttgtgacggtacggaatgcagcactgcaacaaaccgaaacg 120
           || ||||||||||| ||| || || | ||||| ||    || ||||  |||| ||| || 
Sbjct: 61  tcaaccagtatccgccacattctggctgtacgaaagagtgcgctgctgcaaatcgacaca 120

Query: 121 cttatccggcaactggcagaaatctcagtcctgacag 157
           ||||||||||||||||||||||||||||| |||||||
Sbjct: 121 cttatccggcaactggcagaaatctcagtactgacag 157


 Score = 152 bits (391), Expect = 7e-37
 Identities = 90/103 (87%)
 Strand = Plus / Plus

Query: 729 atactttaagaagggc-ccgcacacatcacattcagaaagccagagctggttgacaggct 787
           |||||||||||||||| |||| |||||||| |||| ||| | ||| ||||||||||||||
Sbjct: 738 atactttaagaagggctccgcgcacatcacgttcaaaaatcaagaactggttgacaggct 797

Query: 788 taatgatattattgccagacactacctaggaatgttaccttca 830
            ||||| |||||||| |||||||| |  |||||||||||||||
Sbjct: 798 gaatgacattattgcaagacactatccgggaatgttaccttca 840

4) ECSP_4659 in NC_013008


>AJ488511|84|G78|24528062|CAD33792.1|Escherichia_coli_536|+|75922..76767|z1226|-|Z1226 
          Length = 846

 Score = 482 bits (1244), Expect = e-136
 Identities = 266/299 (89%)
 Strand = Plus / Plus

Query: 175 aaaaccgccctggaccgggcgatgaaacaggattttcactgcggctgctggctgatggag 234
           ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 172 aaaaccgccctggactgggcgatgaaacaggattttcgctgcggctgctggctgatggag 231

Query: 235 aaacctgaaaccgcaatgaaagccatcacccgcaacctcgactgcgaaatctggcgtgac 294
           ||||||||||||||||||||||| ||||| ||||| |||||  | |||||||||||||||
Sbjct: 232 aaacctgaaaccgcaatgaaagctatcacacgcaatctcgatcgtgaaatctggcgtgac 291

Query: 295 ctgatgcaacgctccgggatgctgagtctgatggatgcacagggctaggatacatggtac 354
           ||||| ||||| |||||||||||     | ||||||||||||| |   ||||||||||||
Sbjct: 292 ctgatacaacgttccgggatgctttccttaatggatgcacaggcccgtgatacatggtac 351

Query: 355 cgctcactggagtacgataatattccggaaatcagcgaggcgaatatcatgaatgcattc 414
           || |||||||| || |||||| |||||||||||||||||||||||||| |||   |||| 
Sbjct: 352 cggtcactggaatatgataattttccggaaatcagcgaggcgaatatcctgagcacattt 411

Query: 415 aaacaactgcaccagagtaaggatgaagtgtttgagcgtggggtgatcaacgtcttcag 473
            ||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 412 gaacaactgcaccagaataaggatgaggtgtttgagcgaggggtgatcaacgtcttcag 470


 Score = 343 bits (884), Expect = 2e-94
 Identities = 199/238 (84%)
 Strand = Plus / Plus

Query: 484 ggaattacaaaaccaattccccctgtaaattcggcagtaaaattatcgtcaacaacttgg 543
           |||||||||||||||||| |||||| ||||| |||||||||||||||||||||||| | |
Sbjct: 482 ggaattacaaaaccaattgcccctgcaaatttggcagtaaaattatcgtcaacaacctag 541

Query: 544 tgagatgggacagatggagatttcatcttatcagtggaatgcaggcagatcgcttagctg 603
           |||| |||||| | ||| | |||||||||||||  ||    |||||||||||  | || |
Sbjct: 542 tgaggtgggaccggtgggggtttcatcttatcaccgggcaacaggcagatcgacttgccg 601

Query: 604 acctggaaagaatgttgcatctgctcagcggtaaaccgctccccaacaaccgagggaata 663
           | |||||||||||| | || ||| ||||||| |||||| ||||| ||||||| |  || |
Sbjct: 602 atctggaaagaatgctacacctgttcagcggcaaaccgatccccgacaaccgggaaaaca 661

Query: 664 tcaccattaatctggatgaccacctacagtccgttcagggtaaagagcgctatgaaga 721
           ||||| ||  ||||||||| ||| | ||||||||||||||||||||| ||||||||||
Sbjct: 662 tcacccttcgtctggatgatcacatccagtccgttcagggtaaagagtgctatgaaga 719


 Score = 216 bits (556), Expect = 4e-56
 Identities = 131/157 (83%)
 Strand = Plus / Plus

Query: 1   atgtcaggcatcataatctcccgtccggaagtggacaccgggcatacggacgttatctgc 60
           ||||||| |||||  ||||||||||||||||||  ||  || ||||||||||||||||||
Sbjct: 1   atgtcagacatcaccatctcccgtccggaagtgctcaatggacatacggacgttatctgc 60

Query: 61  tccaccagtatccgacacgttgtgacggtacggaatgcagcactgcaacaaaccgaaacg 120
           || ||||||||||| ||| || || | ||||| ||    || ||||  |||| ||| || 
Sbjct: 61  tcaaccagtatccgccacattctggctgtacgaaagagtgcgctgctgcaaatcgacaca 120

Query: 121 cttatccggcaactggcagaaatctcagtcctgacag 157
           ||||||||||||||||||||||||||||| |||||||
Sbjct: 121 cttatccggcaactggcagaaatctcagtactgacag 157