Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
Outer membrane usher protein PapC |
NC_017845 (Pectobacterium sp. SCC3193) |
9e-119 |
49 |
|
Fimbriae usher protein StfC |
NC_020418 (Morganella morganii KT) |
7e-115 |
52 |
|
hypothetical protein |
NC_005810 (Yersinia pestis 91001) |
1e-97 |
42 |
|
hypothetical protein |
NC_017168 (Yersinia pestis A1122) |
1e-97 |
42 |
|
hypothetical protein |
NC_008150 (Yersinia pestis Antiqua) |
1e-97 |
42 |
|
hypothetical protein |
NC_017160 (Yersinia pestis D182038) |
1e-97 |
42 |
|
hypothetical protein |
NC_017265 (Yersinia pestis Harbin 35) |
1e-97 |
42 |
|
hypothetical protein |
NC_004088 (Yersinia pestis KIM) |
1e-97 |
42 |
|
hypothetical protein |
NC_008149 (Yersinia pestis Nepal516) |
1e-97 |
42 |
|
hypothetical protein |
NC_009381 (Yersinia pestis Pestoides F) |
1e-97 |
42 |
|
hypothetical protein |
NC_017154 (Yersinia pestis D106004) |
1e-96 |
43 |
|
fimbrial usher |
NC_007606 (Shigella dysenteriae Sd197) |
2e-96 |
49 |
|
export usher protein |
NC_017638 (Escherichia coli DH1) |
4e-96 |
44 |
|
export usher protein |
NC_010473 (Escherichia coli K-12) |
5e-96 |
43 |
|
predicted export usher protein |
NC_020518 (Escherichia coli K-12) |
5e-96 |
43 |
|
export usher protein |
NC_007779 (Escherichia coli K-12) |
5e-96 |
43 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='AF447814' AND ph.id_pai_orf='84' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc