> NC_016808_R1|83|G76|378774005|YP_005176248.1|Pasteurella_multocida_36950|+|71520..72722|tet(H)|Pmu_03500|tetracycline 
efflux 
protein, class H
Length=400

 Score =  522 bits (1969),  Expect = 2e-149, Method: Compositional matrix adjust.
 Identities = 397/400 (99%), Positives = 400/400 (100%), Gaps = 0/400 (0%)

Query  1    MNKSIIIILLITVLDAIGIGVIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPI  60
            MNKSIIIILLITVLDAIGIG+IMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPI
Sbjct  1    MNKSIIIILLITVLDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPI  60

Query  61   LGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYigriiagitgatgaVCASAMSD  120
            LGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAVCASAMSD
Sbjct  61   LGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAVCASAMSD  120

Query  121  VTPAKNRTRYFGFLSGAFgvgliigpmlggllgdiSAHMPFIFAAishsillilsllFFR  180
            VTPAKNRTRYFGFL+GAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFR
Sbjct  121  VTPAKNRTRYFGFLGGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFR  180

Query  181  ETQKREALVANRTPENQTASNTVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYRF  240
            ETQKREALVANRTPENQTASNTVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYRF
Sbjct  181  ETQKREALVANRTPENQTASNTVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYRF  240

Query  241  DWNTTSIGMSLAVLGVLHIFFQAIVAGKLAQKWGEKTTimismsidmmGCLLLAWIGHVW  300
            DWNTTSIGMSLAVLGVL+IFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHVW
Sbjct  241  DWNTTSIGMSLAVLGVLNIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHVW  300

Query  301  VILPALICLAAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYSY  360
            VILPALICLAAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYSY
Sbjct  301  VILPALICLAAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYSY  360

Query  361  SVAYWDGLLWLMGAILYAMLLITAYFHQRKTTPKAVISTP  400
            SVAYWDGLLWLMGAILYAMLLITAYFHQRKTTPKAVISTP
Sbjct  361  SVAYWDGLLWLMGAILYAMLLITAYFHQRKTTPKAVISTP  400

> NC_016808_R1|83|G76|378774005|YP_005176248.1|Pasteurella_multocida_36950|+|71520..72722|tet(H)|Pmu_03500|tetracycline 
efflux 
protein, class H
Length=400

 Score =  521 bits (1964),  Expect = 4e-149, Method: Compositional matrix adjust.
 Identities = 396/400 (99%), Positives = 399/400 (99%), Gaps = 0/400 (0%)

Query  1    MNKSIIIILLITVLDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLTLYATMQVIFAPI  60
            MNKSIIIILLITVLDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLL+LYATMQVIFAPI
Sbjct  1    MNKSIIIILLITVLDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPI  60

Query  61   LGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYigriiagitgatgaaCASAMSD  120
            LGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGA CASAMSD
Sbjct  61   LGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAVCASAMSD  120

Query  121  VTPAKNRTRYFGFLSGAFgvgliigpmlggllgdiSAHMPFIFAAishsillilsllFFR  180
            VTPAKNRTRYFGFL+GAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFR
Sbjct  121  VTPAKNRTRYFGFLGGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFR  180

Query  181  ETQKREALVANRTPENQTASNTVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYRF  240
            ETQKREALVANRTPENQTASNTVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYRF
Sbjct  181  ETQKREALVANRTPENQTASNTVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYRF  240

Query  241  DWNTTSIGMSLAVLGVLHIFFQAIVAGKLAQKWGEKTTimismsidmmGCLLLAWIGHVW  300
            DWNTTSIGMSLAVLGVL+IFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHVW
Sbjct  241  DWNTTSIGMSLAVLGVLNIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHVW  300

Query  301  VILPALICLAAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYSY  360
            VILPALICLAAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYSY
Sbjct  301  VILPALICLAAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYSY  360

Query  361  SVAYWDGLLWLMGAILYAMLLITAYFHQRKTTPKAVISTP  400
            SVAYWDGLLWLMGAILYAMLLITAYFHQRKTTPKAVISTP
Sbjct  361  SVAYWDGLLWLMGAILYAMLLITAYFHQRKTTPKAVISTP  400

> NC_016808_R1|83|G76|378774005|YP_005176248.1|Pasteurella_multocida_36950|+|71520..72722|tet(H)|Pmu_03500|tetracycline 
efflux 
protein, class H
Length=400

 Score =  506 bits (1907),  Expect = 1e-144, Method: Compositional matrix adjust.
 Identities = 400/400 (100%), Positives = 400/400 (100%), Gaps = 0/400 (0%)

Query  1    MNKSIIIILLITVLDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPI  60
            MNKSIIIILLITVLDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPI
Sbjct  1    MNKSIIIILLITVLDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPI  60

Query  61   LGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYigriiagitgatgaVCASAMSD  120
            LGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAVCASAMSD
Sbjct  61   LGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAVCASAMSD  120

Query  121  VTPAKNRTRYfgflggafgvgliigpmlggllgdiSAHMPFIFAAishsillilsllFFR  180
            VTPAKNRTRYFGFLGGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFR
Sbjct  121  VTPAKNRTRYFGFLGGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFR  180

Query  181  ETQKREALVANRTPENQTASNTVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYRF  240
            ETQKREALVANRTPENQTASNTVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYRF
Sbjct  181  ETQKREALVANRTPENQTASNTVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYRF  240

Query  241  DWNTTSIGMSLAVLGVLNIFFQAIVAGKLAQKWGEKTTimismsidmmGCLLLAWIGHVW  300
            DWNTTSIGMSLAVLGVLNIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHVW
Sbjct  241  DWNTTSIGMSLAVLGVLNIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHVW  300

Query  301  VILPALICLAAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYSY  360
            VILPALICLAAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYSY
Sbjct  301  VILPALICLAAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYSY  360

Query  361  SVAYWDGLLWLMGAILYAMLLITAYFHQRKTTPKAVISTP  400
            SVAYWDGLLWLMGAILYAMLLITAYFHQRKTTPKAVISTP
Sbjct  361  SVAYWDGLLWLMGAILYAMLLITAYFHQRKTTPKAVISTP  400

> NC_016808_R1|83|G76|378774005|YP_005176248.1|Pasteurella_multocida_36950|+|71520..72722|tet(H)|Pmu_03500|tetracycline 
efflux 
protein, class H
Length=400

 Score =  505 bits (1906),  Expect = 2e-144, Method: Compositional matrix adjust.
 Identities = 399/400 (99%), Positives = 400/400 (100%), Gaps = 0/400 (0%)

Query  1    MNKSIIIILLITVLDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPI  60
            MNKSIIIILLITVLDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPI
Sbjct  1    MNKSIIIILLITVLDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPI  60

Query  61   LGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYigriiagitgatgaVCASAMSD  120
            LGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAVCASAMSD
Sbjct  61   LGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAVCASAMSD  120

Query  121  VTPAKNRTRYfgflggafgvgliigpmlggllgdiSAHMPFIFAAishsillilsllFFR  180
            VTPAKNRTRYFGFLGGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFR
Sbjct  121  VTPAKNRTRYFGFLGGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFR  180

Query  181  ETQKREALVANRTPENQTASNTVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYRF  240
            ETQKREALVANRTPENQTASNTVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYRF
Sbjct  181  ETQKREALVANRTPENQTASNTVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYRF  240

Query  241  DWNTTSIGMSLAVLGVLHIFFQAIVAGKLAQKWGEKTTimismsidmmGCLLLAWIGHVW  300
            DWNTTSIGMSLAVLGVL+IFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHVW
Sbjct  241  DWNTTSIGMSLAVLGVLNIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHVW  300

Query  301  VILPALICLAAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYSY  360
            VILPALICLAAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYSY
Sbjct  301  VILPALICLAAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYSY  360

Query  361  SVAYWDGLLWLMGAILYAMLLITAYFHQRKTTPKAVISTP  400
            SVAYWDGLLWLMGAILYAMLLITAYFHQRKTTPKAVISTP
Sbjct  361  SVAYWDGLLWLMGAILYAMLLITAYFHQRKTTPKAVISTP  400

> NC_016808_R1|83|G76|378774005|YP_005176248.1|Pasteurella_multocida_36950|+|71520..72722|tet(H)|Pmu_03500|tetracycline 
efflux 
protein, class H
Length=400

 Score =  505 bits (1906),  Expect = 2e-144, Method: Compositional matrix adjust.
 Identities = 399/400 (99%), Positives = 400/400 (100%), Gaps = 0/400 (0%)

Query  1    MNKSIIIILLITVLDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPI  60
            MNKSIIIILLITVLDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPI
Sbjct  1    MNKSIIIILLITVLDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPI  60

Query  61   LGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYigriiagitgatgaVCASAMSD  120
            LGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAVCASAMSD
Sbjct  61   LGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAVCASAMSD  120

Query  121  VTPAKNRTRYfgflggafgvgliigpmlggllgdiSAHMPFIFAAishsillilsllFFR  180
            VTPAKNRTRYFGFLGGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFR
Sbjct  121  VTPAKNRTRYFGFLGGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFR  180

Query  181  ETQKREALVANRTPENQTASNTVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYRF  240
            ETQKREALVANRTPENQTASNTVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYRF
Sbjct  181  ETQKREALVANRTPENQTASNTVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYRF  240

Query  241  DWNTTSIGMSLAVLGVLHIFFQAIVAGKLAQKWGEKTTimismsidmmGCLLLAWIGHVW  300
            DWNTTSIGMSLAVLGVL+IFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHVW
Sbjct  241  DWNTTSIGMSLAVLGVLNIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHVW  300

Query  301  VILPALICLAAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYSY  360
            VILPALICLAAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYSY
Sbjct  301  VILPALICLAAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYSY  360

Query  361  SVAYWDGLLWLMGAILYAMLLITAYFHQRKTTPKAVISTP  400
            SVAYWDGLLWLMGAILYAMLLITAYFHQRKTTPKAVISTP
Sbjct  361  SVAYWDGLLWLMGAILYAMLLITAYFHQRKTTPKAVISTP  400

> NC_016808_R1|83|G76|378774005|YP_005176248.1|Pasteurella_multocida_36950|+|71520..72722|tet(H)|Pmu_03500|tetracycline 
efflux 
protein, class H
Length=400

 Score =  423 bits (1591),  Expect = 1e-119, Method: Compositional matrix adjust.
 Identities = 313/394 (80%), Positives = 359/394 (92%), Gaps = 0/394 (0%)

Query  1    MNKSIIIILLVTVLDAIGIGLIMPVLPTLLNEFVSENRLANHYGILLALYATMQVIFAPI  60
            MNKSIIIILL+TVLDAIGIGLIMPVLPTLLNEFVSEN LA HYG+LLALYATMQVIFAPI
Sbjct  1    MNKSIIIILLITVLDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPI  60

Query  61   LGKLSDKYGRKPILLFSLLGAALDYLLMACSTSLWMLYigriiagitgatgaVCASAMTD  120
            LG+LSDKYGRKPILLFSLLGAALDYLLMA ST+LWMLYIGRIIAGITGATGAVCASAM+D
Sbjct  61   LGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAVCASAMSD  120

Query  121  VTHPHERTRYfgflggafgvgliigpmlggllgeiSAHTPFIFAAishsllfifsllCFQ  180
            VT + +RTRYFGFLGGAFGVGLIIGPMLGGLLG+ISAH PFIFAAISHS+L+I+SLL F+
Sbjct  121  VTPAKNRTRYFGFLGGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFR  180

Query  181  ETQTTKISTEISALNQDTAPHSTTGFIKKSLFFWLIAYFIIQLIGQIPATIWVLFTQVRF  240
            ETQ         + +++TA+++ T F+KKSL+FWL +YFIIQLIGQIPATIWVLFTQ RF
Sbjct  181  ETQKREALVANRTPENQTASNTVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYRF  240

Query  241  AWHTTEVGLSLAFLGVLHIFFQAVLAGKLAQKWGERNTVIISMSIDAFGCLLLAWISHVW  300
             W+TT +G+SLA LGVL+IFFQA++AGKLAQKWGE+ T++ISMSID  GCLLLAWI+HVW
Sbjct  241  DWNTTSIGMSLAVLGVLNIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHVW  300

Query  301  VMLPALICLAAGGMGQPALQGYLSKSVDHHVQGQLQGTLVSLTNITGIVGPLLFSFIYSY  360
            V+LPALICLAAGGMGQPALQGYLSKSVD++ QG+LQGTLVSLTNITGI+GPLLF+FIYSY
Sbjct  301  VILPALICLAAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYSY  360

Query  361  SVEYWDGLLWFIGAMLYSGLLVASYFKQKSPILK  394
            SV YWDGLLW++GA+LY+ LL+++YF Q+    K
Sbjct  361  SVAYWDGLLWLMGAILYAMLLITAYFHQRKTTPK  394

> NC_016808_R1|83|G76|378774005|YP_005176248.1|Pasteurella_multocida_36950|+|71520..72722|tet(H)|Pmu_03500|tetracycline 
efflux 
protein, class H
Length=400

 Score =  414 bits (1560),  Expect = 4e-117, Method: Compositional matrix adjust.
 Identities = 312/394 (80%), Positives = 357/394 (91%), Gaps = 0/394 (0%)

Query  1    MNKliiiillvtvlDAIGIGLIMPVLPTLLNEFVSENRLANHYGILLALYATMQVIFAPI  60
            MNK IIIILL+TVLDAIGIGLIMPVLPTLLNEFVSEN LA HYG+LLALYATMQVIFAPI
Sbjct  1    MNKSIIIILLITVLDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPI  60

Query  61   LGKLSDKYGRKPILLFSLLGAALDYLLMACSTSLWMLYigriiagitgatgaVCASAMTD  120
            LG+LSDKYGRKPILLFSLLGAALDYLLMA ST+LWMLYIGRIIAGITGATGAVCASAM+D
Sbjct  61   LGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAVCASAMSD  120

Query  121  VTHSHERTRYfgflggafgvgliigpmlggllgeiSAHTPFIFAAishsllfifsllCFQ  180
            VT + +RTRYFGFLGGAFGVGLIIGPMLGGLLG+ISAH PFIFAAISHS+L+I+SLL F+
Sbjct  121  VTPAKNRTRYFGFLGGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFR  180

Query  181  ETQTTKISTEISALNQETAPHSATGFIKKSLCFWLIAYFIIQLIGQIPATIWVLFTQVRF  240
            ETQ         + +++TA+++ T F+KKSL FWL +YFIIQLIGQIPATIWVLFTQ RF
Sbjct  181  ETQKREALVANRTPENQTASNTVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYRF  240

Query  241  AWHTTEVGLSLAFLGVLHIFFQAVLAGKLAQKWGERNTVIISMSIDAFGCLLLAWISHVW  300
             W+TT +G+SLA LGVL+IFFQA++AGKLAQKWGE+ T++ISMSID  GCLLLAWI+HVW
Sbjct  241  DWNTTSIGMSLAVLGVLNIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHVW  300

Query  301  VMLPALICLAAGGMGQPALQGYLSKSVDHHVQGQLQGTLVSLTNITGIVGPLLFSFIYSY  360
            V+LPALICLAAGGMGQPALQGYLSKSVD++ QG+LQGTLVSLTNITGI+GPLLF+FIYSY
Sbjct  301  VILPALICLAAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYSY  360

Query  361  SVEYWDGLLWFIGAMLYSGLLVASYFKQKSPILK  394
            SV YWDGLLW++GA+LY+ LL+++YF Q+    K
Sbjct  361  SVAYWDGLLWLMGAILYAMLLITAYFHQRKTTPK  394

> NC_016808_R1|83|G76|378774005|YP_005176248.1|Pasteurella_multocida_36950|+|71520..72722|tet(H)|Pmu_03500|tetracycline 
efflux 
protein, class H
Length=400

 Score =  282 bits (1055),  Expect = 3e-77, Method: Compositional matrix adjust.
 Identities = 204/383 (54%), Positives = 300/383 (79%), Gaps = 3/383 (0%)

Query  1    MNSSTKIALVITLLDAMGIGLIMPVLPTLLREFIASEDIANHFGVLLALYALMQVIFAPW  60
            MN S  I L+IT+LDA+GIGLIMPVLPTLL EF++ + +A H+GVLLALYA MQVIFAP 
Sbjct  1    MNKSIIIILLITVLDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPI  60

Query  61   LGKMSDRFGRRPVLLLSLIGASLDYLLLAFSSALWMLYLGRLLSGITGATGAVAASVIAD  120
            LG++SD++GR+P+LL+SL+GA+LDYLL+AFS++LWMLY+GR+++GITGATGAV AS ++D
Sbjct  61   LGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAVCASAMSD  120

Query  121  TTSASQRVKWFGWLGASfglgliagpiiggfagEISPHSPFFIAALLNIVTFLVVMFWFR  180
             T+A +R + FG LG++FG+GLI GP++GG+ G+IS+H PF++AA+ + + +++ ++ FR
Sbjct  121  VTPAKNRTRYFGFLGGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFR  180

Query  181  ETKNTRDNTDTEVGVETQSNSVYITLFKTMPIL--LIIYFSAQLIGQIPATVWVLFTENR  238
            ET++ R+   ++   E Q+ S  +T+F   ++   L  YF  QLIGQIPAT+WVLFT+ R
Sbjct  181  ETQK-REALVANRTPENQTASNTVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYR  239

Query  239  FGWNSMMVGFSLAGLGLLHSVFQAFVAGRIATKWGEKTAVLLGFIADSSAFAFLAFISEG  298
            F+WN+  +G SLA LG+L+  FQA+VAG++A KWGEKT+++++   D  +  +LA I++ 
Sbjct  240  FDWNTTSIGMSLAVLGVLNIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHV  299

Query  299  WLVFPVlillagggialpalQGVMSIQTKSHQQGALQGLLVSLTNATGVIGPLLFAVIYN  358
            W+++P LI LA+GG++ PALQG +S     + QG LQG LVSLTN TG+IGPLLFA IY+
Sbjct  300  WVILPALICLAAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYS  359

Query  359  HSLPIWDGWIWIIGLAFYCIIIL  381
             S++ WDG +W++G  +Y ++++
Sbjct  360  YSVAYWDGLLWLMGAILYAMLLI  382

> NC_016808_R1|83|G76|378774005|YP_005176248.1|Pasteurella_multocida_36950|+|71520..72722|tet(H)|Pmu_03500|tetracycline 
efflux 
protein, class H
Length=400

 Score =  282 bits (1054),  Expect = 3e-77, Method: Compositional matrix adjust.
 Identities = 205/383 (54%), Positives = 302/383 (79%), Gaps = 3/383 (0%)

Query  17   MNSSTKIALVITLLDAMGIGLIMPVLPTLLREFIASEDIANHFGVLLALYALMQVIFAPW  76
            MN S  I L+IT+LDA+GIGLIMPVLPTLL EF++ + +A H+GVLLALYA MQVIFAP 
Sbjct  1    MNKSIIIILLITVLDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPI  60

Query  77   LGKMSDRFGRRPVLLLSLIGASLDYLLLAFSSALWMLYLGRLLSGITGATGAVAASVIAD  136
            LG++SD++GR+P+LL+SL+GA+LDYLL+AFS++LWMLY+GR+++GITGATGAV AS ++D
Sbjct  61   LGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAVCASAMSD  120

Query  137  TTSASQRVKWFGWLGASfglgliagpiiggfagEISPHSPFFIAALLNIVAFLVVMFWFR  196
             T+A +R + FG LG++FG+GLI GP++GG+ G+IS+H PF++AA+ + + +++ ++ FR
Sbjct  121  VTPAKNRTRYFGFLGGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFR  180

Query  197  ETKNTRDNTDTEVGVETQSNSVYITLF--KTMPILLIIYFSAQLIGQIPATVWVLFTENR  254
            ET++ R+   ++   E Q+ S  +T+F  K++ + L  YF  QLIGQIPAT+WVLFT+ R
Sbjct  181  ETQK-REALVANRTPENQTASNTVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYR  239

Query  255  FGWNSMMVGFSLAGLGLLHSVFQAFVAGRIATKWGEKTAVLLGFIADSSAFAFLAFISEG  314
            F+WN+  +G SLA LG+L+  FQA+VAG++A KWGEKT+++++   D  +  +LA I++ 
Sbjct  240  FDWNTTSIGMSLAVLGVLNIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHV  299

Query  315  WLVFPVlillagggialpalQGVMSIQTKSHQQGALQGLLVSLTNATGVIGPLLFAVIYN  374
            W+++P LI LA+GG++ PALQG +S     + QG LQG LVSLTN TG+IGPLLFA IY+
Sbjct  300  WVILPALICLAAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYS  359

Query  375  HSLPIWDGWIWIIGLAFYCIIIL  397
             S++ WDG +W++G  +Y ++++
Sbjct  360  YSVAYWDGLLWLMGAILYAMLLI  382

> NC_016808_R1|83|G76|378774005|YP_005176248.1|Pasteurella_multocida_36950|+|71520..72722|tet(H)|Pmu_03500|tetracycline 
efflux 
protein, class H
Length=400

 Score =  282 bits (1055),  Expect = 3e-77, Method: Compositional matrix adjust.
 Identities = 204/383 (54%), Positives = 300/383 (79%), Gaps = 3/383 (0%)

Query  1    MNSSTKIALVITLLDAMGIGLIMPVLPTLLREFIASEDIANHFGVLLALYALMQVIFAPW  60
            MN S  I L+IT+LDA+GIGLIMPVLPTLL EF++ + +A H+GVLLALYA MQVIFAP 
Sbjct  1    MNKSIIIILLITVLDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPI  60

Query  61   LGKMSDRFGRRPVLLLSLIGASLDYLLLAFSSALWMLYLGRLLSGITGATGAVAASVIAD  120
            LG++SD++GR+P+LL+SL+GA+LDYLL+AFS++LWMLY+GR+++GITGATGAV AS ++D
Sbjct  61   LGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAVCASAMSD  120

Query  121  TTSASQRVKWFGWLGASfglgliagpiiggfagEISPHSPFFIAALLNIVTFLVVMFWFR  180
             T+A +R + FG LG++FG+GLI GP++GG+ G+IS+H PF++AA+ + + +++ ++ FR
Sbjct  121  VTPAKNRTRYFGFLGGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFR  180

Query  181  ETKNTRDNTDTEVGVETQSNSVYITLFKTMPIL--LIIYFSAQLIGQIPATVWVLFTENR  238
            ET++ R+   ++   E Q+ S  +T+F   ++   L  YF  QLIGQIPAT+WVLFT+ R
Sbjct  181  ETQK-REALVANRTPENQTASNTVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYR  239

Query  239  FGWNSMMVGFSLAGLGLLHSVFQAFVAGRIATKWGEKTAVLLGFIADSSAFAFLAFISEG  298
            F+WN+  +G SLA LG+L+  FQA+VAG++A KWGEKT+++++   D  +  +LA I++ 
Sbjct  240  FDWNTTSIGMSLAVLGVLNIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHV  299

Query  299  WLVFPVlillagggialpalQGVMSIQTKSHQQGALQGLLVSLTNATGVIGPLLFAVIYN  358
            W+++P LI LA+GG++ PALQG +S     + QG LQG LVSLTN TG+IGPLLFA IY+
Sbjct  300  WVILPALICLAAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYS  359

Query  359  HSLPIWDGWIWIIGLAFYCIIIL  381
             S++ WDG +W++G  +Y ++++
Sbjct  360  YSVAYWDGLLWLMGAILYAMLLI  382

> NC_016808_R1|83|G76|378774005|YP_005176248.1|Pasteurella_multocida_36950|+|71520..72722|tet(H)|Pmu_03500|tetracycline 
efflux 
protein, class H
Length=400

 Score =  282 bits (1055),  Expect = 3e-77, Method: Compositional matrix adjust.
 Identities = 204/383 (54%), Positives = 300/383 (79%), Gaps = 3/383 (0%)

Query  1    MNSSTKIALVITLLDAMGIGLIMPVLPTLLREFIASEDIANHFGVLLALYALMQVIFAPW  60
            MN S  I L+IT+LDA+GIGLIMPVLPTLL EF++ + +A H+GVLLALYA MQVIFAP 
Sbjct  1    MNKSIIIILLITVLDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPI  60

Query  61   LGKMSDRFGRRPVLLLSLIGASLDYLLLAFSSALWMLYLGRLLSGITGATGAVAASVIAD  120
            LG++SD++GR+P+LL+SL+GA+LDYLL+AFS++LWMLY+GR+++GITGATGAV AS ++D
Sbjct  61   LGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAVCASAMSD  120

Query  121  TTSASQRVKWFGWLGASfglgliagpiiggfagEISPHSPFFIAALLNIVAFLVVMFWFR  180
             T+A +R + FG LG++FG+GLI GP++GG+ G+IS+H PF++AA+ + + +++ ++ FR
Sbjct  121  VTPAKNRTRYFGFLGGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFR  180

Query  181  ETKNTRDNTDTEVGVETQSNSVYITLFKTMPIL--LIIYFSAQLIGQIPATVWVLFTENR  238
            ET++ R+   ++   E Q+ S  +T+F   ++   L  YF  QLIGQIPAT+WVLFT+ R
Sbjct  181  ETQK-REALVANRTPENQTASNTVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYR  239

Query  239  FGWNSMMVGFSLAGLGLLHSVFQAFVAGRIATKWGEKTAVLLGFIADSSAFAFLAFISEG  298
            F+WN+  +G SLA LG+L+  FQA+VAG++A KWGEKT+++++   D  +  +LA I++ 
Sbjct  240  FDWNTTSIGMSLAVLGVLNIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHV  299

Query  299  WLVFPVlillagggialpalQGVMSIQTKSHQQGALQGLLVSLTNATGVIGPLLFAVIYN  358
            W+++P LI LA+GG++ PALQG +S     + QG LQG LVSLTN TG+IGPLLFA IY+
Sbjct  300  WVILPALICLAAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYS  359

Query  359  HSLPIWDGWIWIIGLAFYCIIIL  381
             S++ WDG +W++G  +Y ++++
Sbjct  360  YSVAYWDGLLWLMGAILYAMLLI  382

> NC_016808_R1|83|G76|378774005|YP_005176248.1|Pasteurella_multocida_36950|+|71520..72722|tet(H)|Pmu_03500|tetracycline 
efflux 
protein, class H
Length=400

 Score =  282 bits (1054),  Expect = 3e-77, Method: Compositional matrix adjust.
 Identities = 205/383 (54%), Positives = 302/383 (79%), Gaps = 3/383 (0%)

Query  17   MNSSTKIALVITLLDAMGIGLIMPVLPTLLREFIASEDIANHFGVLLALYALMQVIFAPW  76
            MN S  I L+IT+LDA+GIGLIMPVLPTLL EF++ + +A H+GVLLALYA MQVIFAP 
Sbjct  1    MNKSIIIILLITVLDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPI  60

Query  77   LGKMSDRFGRRPVLLLSLIGASLDYLLLAFSSALWMLYLGRLLSGITGATGAVAASVIAD  136
            LG++SD++GR+P+LL+SL+GA+LDYLL+AFS++LWMLY+GR+++GITGATGAV AS ++D
Sbjct  61   LGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAVCASAMSD  120

Query  137  TTSASQRVKWFGWLGASfglgliagpiiggfagEISPHSPFFIAALLNIVAFLVVMFWFR  196
             T+A +R + FG LG++FG+GLI GP++GG+ G+IS+H PF++AA+ + + +++ ++ FR
Sbjct  121  VTPAKNRTRYFGFLGGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFR  180

Query  197  ETKNTRDNTDTEVGVETQSNSVYITLF--KTMPILLIIYFSAQLIGQIPATVWVLFTENR  254
            ET++ R+   ++   E Q+ S  +T+F  K++ + L  YF  QLIGQIPAT+WVLFT+ R
Sbjct  181  ETQK-REALVANRTPENQTASNTVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYR  239

Query  255  FGWNSMMVGFSLAGLGLLHSVFQAFVAGRIATKWGEKTAVLLGFIADSSAFAFLAFISEG  314
            F+WN+  +G SLA LG+L+  FQA+VAG++A KWGEKT+++++   D  +  +LA I++ 
Sbjct  240  FDWNTTSIGMSLAVLGVLNIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHV  299

Query  315  WLVFPVlillagggialpalQGVMSIQTKSHQQGALQGLLVSLTNATGVIGPLLFAVIYN  374
            W+++P LI LA+GG++ PALQG +S     + QG LQG LVSLTN TG+IGPLLFA IY+
Sbjct  300  WVILPALICLAAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYS  359

Query  375  HSLPIWDGWIWIIGLAFYCIIIL  397
             S++ WDG +W++G  +Y ++++
Sbjct  360  YSVAYWDGLLWLMGAILYAMLLI  382

> NC_016808_R1|83|G76|378774005|YP_005176248.1|Pasteurella_multocida_36950|+|71520..72722|tet(H)|Pmu_03500|tetracycline 
efflux 
protein, class H
Length=400

 Score =  282 bits (1054),  Expect = 3e-77, Method: Compositional matrix adjust.
 Identities = 205/383 (54%), Positives = 302/383 (79%), Gaps = 3/383 (0%)

Query  17   MNSSTKIALVITLLDAMGIGLIMPVLPTLLREFIASEDIANHFGVLLALYALMQVIFAPW  76
            MN S  I L+IT+LDA+GIGLIMPVLPTLL EF++ + +A H+GVLLALYA MQVIFAP 
Sbjct  1    MNKSIIIILLITVLDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPI  60

Query  77   LGKMSDRFGRRPVLLLSLIGASLDYLLLAFSSALWMLYLGRLLSGITGATGAVAASVIAD  136
            LG++SD++GR+P+LL+SL+GA+LDYLL+AFS++LWMLY+GR+++GITGATGAV AS ++D
Sbjct  61   LGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAVCASAMSD  120

Query  137  TTSASQRVKWFGWLGASfglgliagpiiggfagEISPHSPFFIAALLNIVAFLVVMFWFR  196
             T+A +R + FG LG++FG+GLI GP++GG+ G+IS+H PF++AA+ + + +++ ++ FR
Sbjct  121  VTPAKNRTRYFGFLGGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFR  180

Query  197  ETKNTRDNTDTEVGVETQSNSVYITLF--KTMPILLIIYFSAQLIGQIPATVWVLFTENR  254
            ET++ R+   ++   E Q+ S  +T+F  K++ + L  YF  QLIGQIPAT+WVLFT+ R
Sbjct  181  ETQK-REALVANRTPENQTASNTVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYR  239

Query  255  FGWNSMMVGFSLAGLGLLHSVFQAFVAGRIATKWGEKTAVLLGFIADSSAFAFLAFISEG  314
            F+WN+  +G SLA LG+L+  FQA+VAG++A KWGEKT+++++   D  +  +LA I++ 
Sbjct  240  FDWNTTSIGMSLAVLGVLNIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHV  299

Query  315  WLVFPVlillagggialpalQGVMSIQTKSHQQGALQGLLVSLTNATGVIGPLLFAVIYN  374
            W+++P LI LA+GG++ PALQG +S     + QG LQG LVSLTN TG+IGPLLFA IY+
Sbjct  300  WVILPALICLAAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYS  359

Query  375  HSLPIWDGWIWIIGLAFYCIIIL  397
             S++ WDG +W++G  +Y ++++
Sbjct  360  YSVAYWDGLLWLMGAILYAMLLI  382

> NC_016808_R1|83|G76|378774005|YP_005176248.1|Pasteurella_multocida_36950|+|71520..72722|tet(H)|Pmu_03500|tetracycline 
efflux 
protein, class H
Length=400

 Score =  282 bits (1055),  Expect = 3e-77, Method: Compositional matrix adjust.
 Identities = 204/383 (54%), Positives = 300/383 (79%), Gaps = 3/383 (0%)

Query  1    MNSSTKIALVITLLDAMGIGLIMPVLPTLLREFIASEDIANHFGVLLALYALMQVIFAPW  60
            MN S  I L+IT+LDA+GIGLIMPVLPTLL EF++ + +A H+GVLLALYA MQVIFAP 
Sbjct  1    MNKSIIIILLITVLDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPI  60

Query  61   LGKMSDRFGRRPVLLLSLIGASLDYLLLAFSSALWMLYLGRLLSGITGATGAVAASVIAD  120
            LG++SD++GR+P+LL+SL+GA+LDYLL+AFS++LWMLY+GR+++GITGATGAV AS ++D
Sbjct  61   LGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAVCASAMSD  120

Query  121  TTSASQRVKWFGWLGASfglgliagpiiggfagEISPHSPFFIAALLNIVSFLVVMFWFR  180
             T+A +R + FG LG++FG+GLI GP++GG+ G+IS+H PF++AA+ + + +++ ++ FR
Sbjct  121  VTPAKNRTRYFGFLGGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFR  180

Query  181  ETKNTRDNTDTEVGVETQSNSVYITLFKTMPIL--LIIYFSAQLIGQIPATVWVLFTENR  238
            ET++ R+   ++   E Q+ S  +T+F   ++   L  YF  QLIGQIPAT+WVLFT+ R
Sbjct  181  ETQK-REALVANRTPENQTASNTVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYR  239

Query  239  FGWNSMMVGFSLAGLGLLHSVFQAFVAGRIATKWGEKTAVLLGFIADSSAFAFLAFISEG  298
            F+WN+  +G SLA LG+L+  FQA+VAG++A KWGEKT+++++   D  +  +LA I++ 
Sbjct  240  FDWNTTSIGMSLAVLGVLNIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHV  299

Query  299  WLVFPVlillagggialpalQGVMSIQTKSHQQGALQGLLVSLTNATGVIGPLLFAVIYN  358
            W+++P LI LA+GG++ PALQG +S     + QG LQG LVSLTN TG+IGPLLFA IY+
Sbjct  300  WVILPALICLAAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYS  359

Query  359  HSLPIWDGWIWIIGLAFYCIIIL  381
             S++ WDG +W++G  +Y ++++
Sbjct  360  YSVAYWDGLLWLMGAILYAMLLI  382

> NC_016808_R1|83|G76|378774005|YP_005176248.1|Pasteurella_multocida_36950|+|71520..72722|tet(H)|Pmu_03500|tetracycline 
efflux 
protein, class H
Length=400

 Score =  282 bits (1055),  Expect = 3e-77, Method: Compositional matrix adjust.
 Identities = 204/383 (54%), Positives = 300/383 (79%), Gaps = 3/383 (0%)

Query  1    MNSSTKIALVITLLDAMGIGLIMPVLPTLLREFIASEDIANHFGVLLALYALMQVIFAPW  60
            MN S  I L+IT+LDA+GIGLIMPVLPTLL EF++ + +A H+GVLLALYA MQVIFAP 
Sbjct  1    MNKSIIIILLITVLDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPI  60

Query  61   LGKMSDRFGRRPVLLLSLIGASLDYLLLAFSSALWMLYLGRLLSGITGATGAVAASVIAD  120
            LG++SD++GR+P+LL+SL+GA+LDYLL+AFS++LWMLY+GR+++GITGATGAV AS ++D
Sbjct  61   LGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAVCASAMSD  120

Query  121  TTSASQRVKWFGWLGASfglgliagpiiggfagEISPHSPFFIAALLNIVAFLVVMFWFR  180
             T+A +R + FG LG++FG+GLI GP++GG+ G+IS+H PF++AA+ + + +++ ++ FR
Sbjct  121  VTPAKNRTRYFGFLGGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFR  180

Query  181  ETKNTRDNTDTEVGVETQSNSVYITLFKTMPIL--LIIYFSAQLIGQIPATVWVLFTENR  238
            ET++ R+   ++   E Q+ S  +T+F   ++   L  YF  QLIGQIPAT+WVLFT+ R
Sbjct  181  ETQK-REALVANRTPENQTASNTVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYR  239

Query  239  FGWNSMMVGFSLAGLGLLHSVFQAFVAGRIATKWGEKTAVLLGFIADSSAFAFLAFISEG  298
            F+WN+  +G SLA LG+L+  FQA+VAG++A KWGEKT+++++   D  +  +LA I++ 
Sbjct  240  FDWNTTSIGMSLAVLGVLNIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHV  299

Query  299  WLVFPVlillagggialpalQGVMSIQTKSHQQGALQGLLVSLTNATGVIGPLLFAVIYN  358
            W+++P LI LA+GG++ PALQG +S     + QG LQG LVSLTN TG+IGPLLFA IY+
Sbjct  300  WVILPALICLAAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYS  359

Query  359  HSLPIWDGWIWIIGLAFYCIIIL  381
             S++ WDG +W++G  +Y ++++
Sbjct  360  YSVAYWDGLLWLMGAILYAMLLI  382

> NC_016808_R1|83|G76|378774005|YP_005176248.1|Pasteurella_multocida_36950|+|71520..72722|tet(H)|Pmu_03500|tetracycline 
efflux 
protein, class H
Length=400

 Score =  282 bits (1055),  Expect = 3e-77, Method: Compositional matrix adjust.
 Identities = 204/383 (54%), Positives = 300/383 (79%), Gaps = 3/383 (0%)

Query  1    MNSSTKIALVITLLDAMGIGLIMPVLPTLLREFIASEDIANHFGVLLALYALMQVIFAPW  60
            MN S  I L+IT+LDA+GIGLIMPVLPTLL EF++ + +A H+GVLLALYA MQVIFAP 
Sbjct  1    MNKSIIIILLITVLDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPI  60

Query  61   LGKMSDRFGRRPVLLLSLIGASLDYLLLAFSSALWMLYLGRLLSGITGATGAVAASVIAD  120
            LG++SD++GR+P+LL+SL+GA+LDYLL+AFS++LWMLY+GR+++GITGATGAV AS ++D
Sbjct  61   LGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAVCASAMSD  120

Query  121  TTSASQRVKWFGWLGASfglgliagpiiggfagEISPHSPFFIAALLNIVTFLVVMFWFR  180
             T+A +R + FG LG++FG+GLI GP++GG+ G+IS+H PF++AA+ + + +++ ++ FR
Sbjct  121  VTPAKNRTRYFGFLGGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFR  180

Query  181  ETKNTRDNTDTEVGVETQSNSVYITLFKTMPIL--LIIYFSAQLIGQIPATVWVLFTENR  238
            ET++ R+   ++   E Q+ S  +T+F   ++   L  YF  QLIGQIPAT+WVLFT+ R
Sbjct  181  ETQK-REALVANRTPENQTASNTVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYR  239

Query  239  FGWNSMMVGFSLAGLGLLHSVFQAFVAGRIATKWGEKTAVLLGFIADSSAFAFLAFISEG  298
            F+WN+  +G SLA LG+L+  FQA+VAG++A KWGEKT+++++   D  +  +LA I++ 
Sbjct  240  FDWNTTSIGMSLAVLGVLNIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHV  299

Query  299  WLVFPVlillagggialpalQGVMSIQTKSHQQGALQGLLVSLTNATGVIGPLLFAVIYN  358
            W+++P LI LA+GG++ PALQG +S     + QG LQG LVSLTN TG+IGPLLFA IY+
Sbjct  300  WVILPALICLAAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYS  359

Query  359  HSLPIWDGWIWIIGLAFYCIIIL  381
             S++ WDG +W++G  +Y ++++
Sbjct  360  YSVAYWDGLLWLMGAILYAMLLI  382

> NC_016808_R1|83|G76|378774005|YP_005176248.1|Pasteurella_multocida_36950|+|71520..72722|tet(H)|Pmu_03500|tetracycline 
efflux 
protein, class H
Length=400

 Score =  282 bits (1055),  Expect = 3e-77, Method: Compositional matrix adjust.
 Identities = 204/383 (54%), Positives = 300/383 (79%), Gaps = 3/383 (0%)

Query  1    MNSSTKIALVITLLDAMGIGLIMPVLPTLLREFIASEDIANHFGVLLALYALMQVIFAPW  60
            MN S  I L+IT+LDA+GIGLIMPVLPTLL EF++ + +A H+GVLLALYA MQVIFAP 
Sbjct  1    MNKSIIIILLITVLDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPI  60

Query  61   LGKMSDRFGRRPVLLLSLIGASLDYLLLAFSSALWMLYLGRLLSGITGATGAVAASVIAD  120
            LG++SD++GR+P+LL+SL+GA+LDYLL+AFS++LWMLY+GR+++GITGATGAV AS ++D
Sbjct  61   LGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAVCASAMSD  120

Query  121  TTSASQRVKWFGWLGASfglgliagpiiggfagEISPHSPFFIAALLNIVTFLVVMFWFR  180
             T+A +R + FG LG++FG+GLI GP++GG+ G+IS+H PF++AA+ + + +++ ++ FR
Sbjct  121  VTPAKNRTRYFGFLGGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFR  180

Query  181  ETKNTRDNTDTEVGVETQSNSVYITLFKTMPIL--LIIYFSAQLIGQIPATVWVLFTENR  238
            ET++ R+   ++   E Q+ S  +T+F   ++   L  YF  QLIGQIPAT+WVLFT+ R
Sbjct  181  ETQK-REALVANRTPENQTASNTVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYR  239

Query  239  FGWNSMMVGFSLAGLGLLHSVFQAFVAGRIATKWGEKTAVLLGFIADSSAFAFLAFISEG  298
            F+WN+  +G SLA LG+L+  FQA+VAG++A KWGEKT+++++   D  +  +LA I++ 
Sbjct  240  FDWNTTSIGMSLAVLGVLNIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHV  299

Query  299  WLVFPVlillagggialpalQGVMSIQTKSHQQGALQGLLVSLTNATGVIGPLLFAVIYN  358
            W+++P LI LA+GG++ PALQG +S     + QG LQG LVSLTN TG+IGPLLFA IY+
Sbjct  300  WVILPALICLAAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYS  359

Query  359  HSLPIWDGWIWIIGLAFYCIIIL  381
             S++ WDG +W++G  +Y ++++
Sbjct  360  YSVAYWDGLLWLMGAILYAMLLI  382

> NC_016808_R1|83|G76|378774005|YP_005176248.1|Pasteurella_multocida_36950|+|71520..72722|tet(H)|Pmu_03500|tetracycline 
efflux 
protein, class H
Length=400

 Score =  282 bits (1055),  Expect = 3e-77, Method: Compositional matrix adjust.
 Identities = 204/383 (54%), Positives = 300/383 (79%), Gaps = 3/383 (0%)

Query  1    MNSSTKIALVITLLDAMGIGLIMPVLPTLLREFIASEDIANHFGVLLALYALMQVIFAPW  60
            MN S  I L+IT+LDA+GIGLIMPVLPTLL EF++ + +A H+GVLLALYA MQVIFAP 
Sbjct  1    MNKSIIIILLITVLDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPI  60

Query  61   LGKMSDRFGRRPVLLLSLIGASLDYLLLAFSSALWMLYLGRLLSGITGATGAVAASVIAD  120
            LG++SD++GR+P+LL+SL+GA+LDYLL+AFS++LWMLY+GR+++GITGATGAV AS ++D
Sbjct  61   LGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAVCASAMSD  120

Query  121  TTSASQRVKWFGWLGASfglgliagpiiggfagEISPHSPFFIAALLNIVAFLVVMFWFR  180
             T+A +R + FG LG++FG+GLI GP++GG+ G+IS+H PF++AA+ + + +++ ++ FR
Sbjct  121  VTPAKNRTRYFGFLGGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFR  180

Query  181  ETKNTRDNTDTEVGVETQSNSVYITLFKTMPIL--LIIYFSAQLIGQIPATVWVLFTENR  238
            ET++ R+   ++   E Q+ S  +T+F   ++   L  YF  QLIGQIPAT+WVLFT+ R
Sbjct  181  ETQK-REALVANRTPENQTASNTVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYR  239

Query  239  FGWNSMMVGFSLAGLGLLHSVFQAFVAGRIATKWGEKTAVLLGFIADSSAFAFLAFISEG  298
            F+WN+  +G SLA LG+L+  FQA+VAG++A KWGEKT+++++   D  +  +LA I++ 
Sbjct  240  FDWNTTSIGMSLAVLGVLNIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHV  299

Query  299  WLVFPVlillagggialpalQGVMSIQTKSHQQGALQGLLVSLTNATGVIGPLLFAVIYN  358
            W+++P LI LA+GG++ PALQG +S     + QG LQG LVSLTN TG+IGPLLFA IY+
Sbjct  300  WVILPALICLAAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYS  359

Query  359  HSLPIWDGWIWIIGLAFYCIIIL  381
             S++ WDG +W++G  +Y ++++
Sbjct  360  YSVAYWDGLLWLMGAILYAMLLI  382

> NC_016808_R1|83|G76|378774005|YP_005176248.1|Pasteurella_multocida_36950|+|71520..72722|tet(H)|Pmu_03500|tetracycline 
efflux 
protein, class H
Length=400

 Score =  282 bits (1055),  Expect = 3e-77, Method: Compositional matrix adjust.
 Identities = 204/383 (54%), Positives = 300/383 (79%), Gaps = 3/383 (0%)

Query  1    MNSSTKIALVITLLDAMGIGLIMPVLPTLLREFIASEDIANHFGVLLALYALMQVIFAPW  60
            MN S  I L+IT+LDA+GIGLIMPVLPTLL EF++ + +A H+GVLLALYA MQVIFAP 
Sbjct  1    MNKSIIIILLITVLDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPI  60

Query  61   LGKMSDRFGRRPVLLLSLIGASLDYLLLAFSSALWMLYLGRLLSGITGATGAVAASVIAD  120
            LG++SD++GR+P+LL+SL+GA+LDYLL+AFS++LWMLY+GR+++GITGATGAV AS ++D
Sbjct  61   LGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAVCASAMSD  120

Query  121  TTSASQRVKWFGWLGASfglgliagpiiggfagEISPHSPFFIAALLNIVAFLVVMFWFR  180
             T+A +R + FG LG++FG+GLI GP++GG+ G+IS+H PF++AA+ + + +++ ++ FR
Sbjct  121  VTPAKNRTRYFGFLGGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFR  180

Query  181  ETKNTRDNTDTEVGVETQSNSVYITLFKTMPIL--LIIYFSAQLIGQIPATVWVLFTENR  238
            ET++ R+   ++   E Q+ S  +T+F   ++   L  YF  QLIGQIPAT+WVLFT+ R
Sbjct  181  ETQK-REALVANRTPENQTASNTVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYR  239

Query  239  FGWNSMMVGFSLAGLGLLHSVFQAFVAGRIATKWGEKTAVLLGFIADSSAFAFLAFISEG  298
            F+WN+  +G SLA LG+L+  FQA+VAG++A KWGEKT+++++   D  +  +LA I++ 
Sbjct  240  FDWNTTSIGMSLAVLGVLNIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHV  299

Query  299  WLVFPVlillagggialpalQGVMSIQTKSHQQGALQGLLVSLTNATGVIGPLLFAVIYN  358
            W+++P LI LA+GG++ PALQG +S     + QG LQG LVSLTN TG+IGPLLFA IY+
Sbjct  300  WVILPALICLAAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYS  359

Query  359  HSLPIWDGWIWIIGLAFYCIIIL  381
             S++ WDG +W++G  +Y ++++
Sbjct  360  YSVAYWDGLLWLMGAILYAMLLI  382

> NC_016808_R1|83|G76|378774005|YP_005176248.1|Pasteurella_multocida_36950|+|71520..72722|tet(H)|Pmu_03500|tetracycline 
efflux 
protein, class H
Length=400

 Score =  282 bits (1055),  Expect = 3e-77, Method: Compositional matrix adjust.
 Identities = 204/383 (54%), Positives = 300/383 (79%), Gaps = 3/383 (0%)

Query  1    MNSSTKIALVITLLDAMGIGLIMPVLPTLLREFIASEDIANHFGVLLALYALMQVIFAPW  60
            MN S  I L+IT+LDA+GIGLIMPVLPTLL EF++ + +A H+GVLLALYA MQVIFAP 
Sbjct  1    MNKSIIIILLITVLDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPI  60

Query  61   LGKMSDRFGRRPVLLLSLIGASLDYLLLAFSSALWMLYLGRLLSGITGATGAVAASVIAD  120
            LG++SD++GR+P+LL+SL+GA+LDYLL+AFS++LWMLY+GR+++GITGATGAV AS ++D
Sbjct  61   LGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAVCASAMSD  120

Query  121  TTSASQRVKWFGWLGASfglgliagpiiggfagEISPHSPFFIAALLNIVAFLVVMFWFR  180
             T+A +R + FG LG++FG+GLI GP++GG+ G+IS+H PF++AA+ + + +++ ++ FR
Sbjct  121  VTPAKNRTRYFGFLGGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFR  180

Query  181  ETKNTRDNTDTEVGVETQSNSVYITLFKTMPIL--LIIYFSAQLIGQIPATVWVLFTENR  238
            ET++ R+   ++   E Q+ S  +T+F   ++   L  YF  QLIGQIPAT+WVLFT+ R
Sbjct  181  ETQK-REALVANRTPENQTASNTVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYR  239

Query  239  FGWNSMMVGFSLAGLGLLHSVFQAFVAGRIATKWGEKTAVLLGFIADSSAFAFLAFISEG  298
            F+WN+  +G SLA LG+L+  FQA+VAG++A KWGEKT+++++   D  +  +LA I++ 
Sbjct  240  FDWNTTSIGMSLAVLGVLNIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHV  299

Query  299  WLVFPVlillagggialpalQGVMSIQTKSHQQGALQGLLVSLTNATGVIGPLLFAVIYN  358
            W+++P LI LA+GG++ PALQG +S     + QG LQG LVSLTN TG+IGPLLFA IY+
Sbjct  300  WVILPALICLAAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYS  359

Query  359  HSLPIWDGWIWIIGLAFYCIIIL  381
             S++ WDG +W++G  +Y ++++
Sbjct  360  YSVAYWDGLLWLMGAILYAMLLI  382

> NC_016808_R1|83|G76|378774005|YP_005176248.1|Pasteurella_multocida_36950|+|71520..72722|tet(H)|Pmu_03500|tetracycline 
efflux 
protein, class H
Length=400

 Score =  282 bits (1054),  Expect = 3e-77, Method: Compositional matrix adjust.
 Identities = 205/383 (54%), Positives = 302/383 (79%), Gaps = 3/383 (0%)

Query  17   MNSSTKIALVITLLDAMGIGLIMPVLPTLLREFIASEDIANHFGVLLALYALMQVIFAPW  76
            MN S  I L+IT+LDA+GIGLIMPVLPTLL EF++ + +A H+GVLLALYA MQVIFAP 
Sbjct  1    MNKSIIIILLITVLDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPI  60

Query  77   LGKMSDRFGRRPVLLLSLIGASLDYLLLAFSSALWMLYLGRLLSGITGATGAVAASVIAD  136
            LG++SD++GR+P+LL+SL+GA+LDYLL+AFS++LWMLY+GR+++GITGATGAV AS ++D
Sbjct  61   LGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAVCASAMSD  120

Query  137  TTSASQRVKWFGWLGASfglgliagpiiggfagEISPHSPFFIAALLNIVAFLVVMFWFR  196
             T+A +R + FG LG++FG+GLI GP++GG+ G+IS+H PF++AA+ + + +++ ++ FR
Sbjct  121  VTPAKNRTRYFGFLGGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFR  180

Query  197  ETKNTRDNTDTEVGVETQSNSVYITLF--KTMPILLIIYFSAQLIGQIPATVWVLFTENR  254
            ET++ R+   ++   E Q+ S  +T+F  K++ + L  YF  QLIGQIPAT+WVLFT+ R
Sbjct  181  ETQK-REALVANRTPENQTASNTVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYR  239

Query  255  FGWNSMMVGFSLAGLGLLHSVFQAFVAGRIATKWGEKTAVLLGFIADSSAFAFLAFISEG  314
            F+WN+  +G SLA LG+L+  FQA+VAG++A KWGEKT+++++   D  +  +LA I++ 
Sbjct  240  FDWNTTSIGMSLAVLGVLNIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHV  299

Query  315  WLVFPVlillagggialpalQGVMSIQTKSHQQGALQGLLVSLTNATGVIGPLLFAVIYN  374
            W+++P LI LA+GG++ PALQG +S     + QG LQG LVSLTN TG+IGPLLFA IY+
Sbjct  300  WVILPALICLAAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYS  359

Query  375  HSLPIWDGWIWIIGLAFYCIIIL  397
             S++ WDG +W++G  +Y ++++
Sbjct  360  YSVAYWDGLLWLMGAILYAMLLI  382

> NC_016808_R1|83|G76|378774005|YP_005176248.1|Pasteurella_multocida_36950|+|71520..72722|tet(H)|Pmu_03500|tetracycline 
efflux 
protein, class H
Length=400

 Score =  282 bits (1055),  Expect = 3e-77, Method: Compositional matrix adjust.
 Identities = 204/383 (54%), Positives = 300/383 (79%), Gaps = 3/383 (0%)

Query  1    MNSSTKIALVITLLDAMGIGLIMPVLPTLLREFIASEDIANHFGVLLALYALMQVIFAPW  60
            MN S  I L+IT+LDA+GIGLIMPVLPTLL EF++ + +A H+GVLLALYA MQVIFAP 
Sbjct  1    MNKSIIIILLITVLDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPI  60

Query  61   LGKMSDRFGRRPVLLLSLIGASLDYLLLAFSSALWMLYLGRLLSGITGATGAVAASVIAD  120
            LG++SD++GR+P+LL+SL+GA+LDYLL+AFS++LWMLY+GR+++GITGATGAV AS ++D
Sbjct  61   LGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAVCASAMSD  120

Query  121  TTSASQRVKWFGWLGASfglgliagpiiggfagEISPHSPFFIAALLNIVAFLVVMFWFR  180
             T+A +R + FG LG++FG+GLI GP++GG+ G+IS+H PF++AA+ + + +++ ++ FR
Sbjct  121  VTPAKNRTRYFGFLGGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFR  180

Query  181  ETKNTRDNTDTEVGVETQSNSVYITLFKTMPIL--LIIYFSAQLIGQIPATVWVLFTENR  238
            ET++ R+   ++   E Q+ S  +T+F   ++   L  YF  QLIGQIPAT+WVLFT+ R
Sbjct  181  ETQK-REALVANRTPENQTASNTVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYR  239

Query  239  FGWNSMMVGFSLAGLGLLHSVFQAFVAGRIATKWGEKTAVLLGFIADSSAFAFLAFISEG  298
            F+WN+  +G SLA LG+L+  FQA+VAG++A KWGEKT+++++   D  +  +LA I++ 
Sbjct  240  FDWNTTSIGMSLAVLGVLNIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHV  299

Query  299  WLVFPVlillagggialpalQGVMSIQTKSHQQGALQGLLVSLTNATGVIGPLLFAVIYN  358
            W+++P LI LA+GG++ PALQG +S     + QG LQG LVSLTN TG+IGPLLFA IY+
Sbjct  300  WVILPALICLAAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYS  359

Query  359  HSLPIWDGWIWIIGLAFYCIIIL  381
             S++ WDG +W++G  +Y ++++
Sbjct  360  YSVAYWDGLLWLMGAILYAMLLI  382

> NC_016808_R1|83|G76|378774005|YP_005176248.1|Pasteurella_multocida_36950|+|71520..72722|tet(H)|Pmu_03500|tetracycline 
efflux 
protein, class H
Length=400

 Score =  282 bits (1055),  Expect = 3e-77, Method: Compositional matrix adjust.
 Identities = 204/383 (54%), Positives = 300/383 (79%), Gaps = 3/383 (0%)

Query  1    MNSSTKIALVITLLDAMGIGLIMPVLPTLLREFIASEDIANHFGVLLALYALMQVIFAPW  60
            MN S  I L+IT+LDA+GIGLIMPVLPTLL EF++ + +A H+GVLLALYA MQVIFAP 
Sbjct  1    MNKSIIIILLITVLDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPI  60

Query  61   LGKMSDRFGRRPVLLLSLIGASLDYLLLAFSSALWMLYLGRLLSGITGATGAVAASVIAD  120
            LG++SD++GR+P+LL+SL+GA+LDYLL+AFS++LWMLY+GR+++GITGATGAV AS ++D
Sbjct  61   LGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAVCASAMSD  120

Query  121  TTSASQRVKWFGWLGASfglgliagpiiggfagEISPHSPFFIAALLNIVAFLVVMFWFR  180
             T+A +R + FG LG++FG+GLI GP++GG+ G+IS+H PF++AA+ + + +++ ++ FR
Sbjct  121  VTPAKNRTRYFGFLGGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFR  180

Query  181  ETKNTRDNTDTEVGVETQSNSVYITLFKTMPIL--LIIYFSAQLIGQIPATVWVLFTENR  238
            ET++ R+   ++   E Q+ S  +T+F   ++   L  YF  QLIGQIPAT+WVLFT+ R
Sbjct  181  ETQK-REALVANRTPENQTASNTVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYR  239

Query  239  FGWNSMMVGFSLAGLGLLHSVFQAFVAGRIATKWGEKTAVLLGFIADSSAFAFLAFISEG  298
            F+WN+  +G SLA LG+L+  FQA+VAG++A KWGEKT+++++   D  +  +LA I++ 
Sbjct  240  FDWNTTSIGMSLAVLGVLNIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHV  299

Query  299  WLVFPVlillagggialpalQGVMSIQTKSHQQGALQGLLVSLTNATGVIGPLLFAVIYN  358
            W+++P LI LA+GG++ PALQG +S     + QG LQG LVSLTN TG+IGPLLFA IY+
Sbjct  300  WVILPALICLAAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYS  359

Query  359  HSLPIWDGWIWIIGLAFYCIIIL  381
             S++ WDG +W++G  +Y ++++
Sbjct  360  YSVAYWDGLLWLMGAILYAMLLI  382

> NC_016808_R1|83|G76|378774005|YP_005176248.1|Pasteurella_multocida_36950|+|71520..72722|tet(H)|Pmu_03500|tetracycline 
efflux 
protein, class H
Length=400

 Score =  281 bits (1052),  Expect = 5e-77, Method: Compositional matrix adjust.
 Identities = 205/383 (54%), Positives = 302/383 (79%), Gaps = 3/383 (0%)

Query  7    MNSSTKIALVITLLDAMGIGLIMPVLPTLLREFIASEDIANHFGVLLALYALMQVIFAPW  66
            MN S  I L+IT+LDA+GIGLIMPVLPTLL EF++ + +A H+GVLLALYA MQVIFAP 
Sbjct  1    MNKSIIIILLITVLDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPI  60

Query  67   LGKMSDRFGRRPVLLLSLIGASLDYLLLAFSSALWMLYLGRLLSGITGATGAVAASVIAD  126
            LG++SD++GR+P+LL+SL+GA+LDYLL+AFS++LWMLY+GR+++GITGATGAV AS ++D
Sbjct  61   LGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAVCASAMSD  120

Query  127  TTSASQRVKWFGWLGASfglgliagpiiggfagEISPHSPFFIAALLNIVTFLVVMFWFR  186
             T+A +R + FG LG++FG+GLI GP++GG+ G+IS+H PF++AA+ + + +++ ++ FR
Sbjct  121  VTPAKNRTRYFGFLGGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFR  180

Query  187  ETKNTRDNTDTEVGVETQSNSVYITLF--KTMPILLIIYFSAQLIGQIPATVWVLFTENR  244
            ET++ R+   ++   E Q+ S  +T+F  K++ + L  YF  QLIGQIPAT+WVLFT+ R
Sbjct  181  ETQK-REALVANRTPENQTASNTVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYR  239

Query  245  FGWNSMMVGFSLAGLGLLHSVFQAFVAGRIATKWGEKTAVLLGFIADSSAFAFLAFISEG  304
            F+WN+  +G SLA LG+L+  FQA+VAG++A KWGEKT+++++   D  +  +LA I++ 
Sbjct  240  FDWNTTSIGMSLAVLGVLNIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHV  299

Query  305  WLVFPVlillagggialpalQGVMSIQTKSHQQGALQGLLVSLTNATGVIGPLLFAVIYN  364
            W+++P LI LA+GG++ PALQG +S     + QG LQG LVSLTN TG+IGPLLFA IY+
Sbjct  300  WVILPALICLAAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYS  359

Query  365  HSLPIWDGWIWIIGLAFYCIIIL  387
             S++ WDG +W++G  +Y ++++
Sbjct  360  YSVAYWDGLLWLMGAILYAMLLI  382

> NC_016808_R1|83|G76|378774005|YP_005176248.1|Pasteurella_multocida_36950|+|71520..72722|tet(H)|Pmu_03500|tetracycline 
efflux 
protein, class H
Length=400

 Score =  281 bits (1051),  Expect = 6e-77, Method: Compositional matrix adjust.
 Identities = 205/383 (54%), Positives = 302/383 (79%), Gaps = 3/383 (0%)

Query  1    MNSSTKIALVITLLDAMGIGLIMPVLPTLLREFIASEDIANHFGVLLALYALMQVIFAPW  60
            MN S  I L+IT+LDA+GIGLIMPVLPTLL EF++ + +A H+GVLLALYA MQVIFAP 
Sbjct  1    MNKSIIIILLITVLDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPI  60

Query  61   LGKMSDRFGRRPVLLLSLIGASLDYLLLAFSSALWMLYLGRLLSGITGATGAVAASVIAD  120
            LG++SD++GR+P+LL+SL+GA+LDYLL+AFS++LWMLY+GR+++GITGATGAV AS ++D
Sbjct  61   LGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAVCASAMSD  120

Query  121  TTSASQRVKWFGWLGASfglgliagpiiggfagEISPHSPFFIAALLNIVTFLVVMFWFR  180
             T+A +R + FG LG++FG+GLI GP++GG+ G+IS+H PF++AA+ + + +++ ++ FR
Sbjct  121  VTPAKNRTRYFGFLGGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFR  180

Query  181  ETKNTRDNTDTEVGVETQSNSVYITLF--KTMPILLIIYFSAQLIGQIPATVWVLFTENR  238
            ET++ R+   ++   E Q+ S  +T+F  K++ + L  YF  QLIGQIPAT+WVLFT+ R
Sbjct  181  ETQK-REALVANRTPENQTASNTVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYR  239

Query  239  FGWNSMMVGFSLAGLGLLHSVFQAFVAGRIATKWGEKTAVLLGFIADSSAFAFLAFISEG  298
            F+WN+  +G SLA LG+L+  FQA+VAG++A KWGEKT+++++   D  +  +LA I++ 
Sbjct  240  FDWNTTSIGMSLAVLGVLNIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHV  299

Query  299  WLVFPVlillagggialpalQGVMSIQTKSHQQGALQGLLVSLTNATGVIGPLLFAVIYN  358
            W+++P LI LA+GG++ PALQG +S     + QG LQG LVSLTN TG+IGPLLFA IY+
Sbjct  300  WVILPALICLAAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYS  359

Query  359  HSLPIWDGWIWIIGLAFYCIIIL  381
             S++ WDG +W++G  +Y ++++
Sbjct  360  YSVAYWDGLLWLMGAILYAMLLI  382

> NC_016808_R1|83|G76|378774005|YP_005176248.1|Pasteurella_multocida_36950|+|71520..72722|tet(H)|Pmu_03500|tetracycline 
efflux 
protein, class H
Length=400

 Score =  281 bits (1051),  Expect = 6e-77, Method: Compositional matrix adjust.
 Identities = 205/383 (54%), Positives = 302/383 (79%), Gaps = 3/383 (0%)

Query  1    MNSSTKIALVITLLDAMGIGLIMPVLPTLLREFIASEDIANHFGVLLALYALMQVIFAPW  60
            MN S  I L+IT+LDA+GIGLIMPVLPTLL EF++ + +A H+GVLLALYA MQVIFAP 
Sbjct  1    MNKSIIIILLITVLDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPI  60

Query  61   LGKMSDRFGRRPVLLLSLIGASLDYLLLAFSSALWMLYLGRLLSGITGATGAVAASVIAD  120
            LG++SD++GR+P+LL+SL+GA+LDYLL+AFS++LWMLY+GR+++GITGATGAV AS ++D
Sbjct  61   LGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAVCASAMSD  120

Query  121  TTSASQRVKWFGWLGASfglgliagpiiggfagEISPHSPFFIAALLNIVTFLVVMFWFR  180
             T+A +R + FG LG++FG+GLI GP++GG+ G+IS+H PF++AA+ + + +++ ++ FR
Sbjct  121  VTPAKNRTRYFGFLGGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFR  180

Query  181  ETKNTRDNTDTEVGVETQSNSVYITLF--KTMPILLIIYFSAQLIGQIPATVWVLFTENR  238
            ET++ R+   ++   E Q+ S  +T+F  K++ + L  YF  QLIGQIPAT+WVLFT+ R
Sbjct  181  ETQK-REALVANRTPENQTASNTVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYR  239

Query  239  FGWNSMMVGFSLAGLGLLHSVFQAFVAGRIATKWGEKTAVLLGFIADSSAFAFLAFISEG  298
            F+WN+  +G SLA LG+L+  FQA+VAG++A KWGEKT+++++   D  +  +LA I++ 
Sbjct  240  FDWNTTSIGMSLAVLGVLNIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHV  299

Query  299  WLVFPVlillagggialpalQGVMSIQTKSHQQGALQGLLVSLTNATGVIGPLLFAVIYN  358
            W+++P LI LA+GG++ PALQG +S     + QG LQG LVSLTN TG+IGPLLFA IY+
Sbjct  300  WVILPALICLAAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYS  359

Query  359  HSLPIWDGWIWIIGLAFYCIIIL  381
             S++ WDG +W++G  +Y ++++
Sbjct  360  YSVAYWDGLLWLMGAILYAMLLI  382

> NC_016808_R1|83|G76|378774005|YP_005176248.1|Pasteurella_multocida_36950|+|71520..72722|tet(H)|Pmu_03500|tetracycline 
efflux 
protein, class H
Length=400

 Score =  281 bits (1051),  Expect = 6e-77, Method: Compositional matrix adjust.
 Identities = 205/383 (54%), Positives = 302/383 (79%), Gaps = 3/383 (0%)

Query  1    MNSSTKIALVITLLDAMGIGLIMPVLPTLLREFIASEDIANHFGVLLALYALMQVIFAPW  60
            MN S  I L+IT+LDA+GIGLIMPVLPTLL EF++ + +A H+GVLLALYA MQVIFAP 
Sbjct  1    MNKSIIIILLITVLDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPI  60

Query  61   LGKMSDRFGRRPVLLLSLIGASLDYLLLAFSSALWMLYLGRLLSGITGATGAVAASVIAD  120
            LG++SD++GR+P+LL+SL+GA+LDYLL+AFS++LWMLY+GR+++GITGATGAV AS ++D
Sbjct  61   LGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAVCASAMSD  120

Query  121  TTSASQRVKWFGWLGASfglgliagpiiggfagEISPHSPFFIAALLNIVTFLVVMFWFR  180
             T+A +R + FG LG++FG+GLI GP++GG+ G+IS+H PF++AA+ + + +++ ++ FR
Sbjct  121  VTPAKNRTRYFGFLGGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFR  180

Query  181  ETKNTRDNTDTEVGVETQSNSVYITLF--KTMPILLIIYFSAQLIGQIPATVWVLFTENR  238
            ET++ R+   ++   E Q+ S  +T+F  K++ + L  YF  QLIGQIPAT+WVLFT+ R
Sbjct  181  ETQK-REALVANRTPENQTASNTVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYR  239

Query  239  FGWNSMMVGFSLAGLGLLHSVFQAFVAGRIATKWGEKTAVLLGFIADSSAFAFLAFISEG  298
            F+WN+  +G SLA LG+L+  FQA+VAG++A KWGEKT+++++   D  +  +LA I++ 
Sbjct  240  FDWNTTSIGMSLAVLGVLNIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHV  299

Query  299  WLVFPVlillagggialpalQGVMSIQTKSHQQGALQGLLVSLTNATGVIGPLLFAVIYN  358
            W+++P LI LA+GG++ PALQG +S     + QG LQG LVSLTN TG+IGPLLFA IY+
Sbjct  300  WVILPALICLAAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYS  359

Query  359  HSLPIWDGWIWIIGLAFYCIIIL  381
             S++ WDG +W++G  +Y ++++
Sbjct  360  YSVAYWDGLLWLMGAILYAMLLI  382

> NC_016808_R1|83|G76|378774005|YP_005176248.1|Pasteurella_multocida_36950|+|71520..72722|tet(H)|Pmu_03500|tetracycline 
efflux 
protein, class H
Length=400

 Score =  281 bits (1051),  Expect = 6e-77, Method: Compositional matrix adjust.
 Identities = 204/383 (54%), Positives = 302/383 (79%), Gaps = 3/383 (0%)

Query  1    MNSSTKIALVITLLDAMGVGLIMPVLPTLLREFIASEDIANHFGVLLALYALMQVIFAPW  60
            MN S  I L+IT+LDA+G+GLIMPVLPTLL EF++ + +A H+GVLLALYA MQVIFAP 
Sbjct  1    MNKSIIIILLITVLDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPI  60

Query  61   LGKMSDRFGRRPVLLLSLIGASLDYLLLAFSSALWMLYLGRLLSGITGATGAVAASVIAD  120
            LG++SD++GR+P+LL+SL+GA+LDYLL+AFS++LWMLY+GR+++GITGATGAV AS ++D
Sbjct  61   LGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAVCASAMSD  120

Query  121  TTSASQRVKWFGWLGASfglgliagpiiggfagEISPHSPFFIAALLNIVTFLVVMFWFR  180
             T+A +R + FG LG++FG+GLI GP++GG+ G+IS+H PF++AA+ + + +++ ++ FR
Sbjct  121  VTPAKNRTRYFGFLGGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFR  180

Query  181  ETKNTRDNTDTEVGVETQSNSVYITLF--KTMPILLIIYFSAQLIGQIPATVWVLFTENR  238
            ET++ R+   ++   E Q+ S  +T+F  K++ + L  YF  QLIGQIPAT+WVLFT+ R
Sbjct  181  ETQK-REALVANRTPENQTASNTVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYR  239

Query  239  FGWNSMMVGFSLAGLGLLHSVFQAFVAGRIATKWGEKTAVLLGFIADSSAFAFLAFISEG  298
            F+WN+  +G SLA LG+L+  FQA+VAG++A KWGEKT+++++   D  +  +LA I++ 
Sbjct  240  FDWNTTSIGMSLAVLGVLNIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHV  299

Query  299  WLVFPVlillagggialpalQGVMSIQTKSHQQGALQGLLVSLTNATGVIGPLLFAVIYN  358
            W+++P LI LA+GG++ PALQG +S     + QG LQG LVSLTN TG+IGPLLFA IY+
Sbjct  300  WVILPALICLAAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYS  359

Query  359  HSLPIWDGWIWIIGLAFYCIIIL  381
             S++ WDG +W++G  +Y ++++
Sbjct  360  YSVAYWDGLLWLMGAILYAMLLI  382

> NC_016808_R1|83|G76|378774005|YP_005176248.1|Pasteurella_multocida_36950|+|71520..72722|tet(H)|Pmu_03500|tetracycline 
efflux 
protein, class H
Length=400

 Score =  280 bits (1046),  Expect = 2e-76, Method: Compositional matrix adjust.
 Identities = 198/372 (54%), Positives = 293/372 (79%), Gaps = 3/372 (0%)

Query  4    TLLDAMGIGLIMPVLPTLLREFIASEDIANHFGVLLALYALMQVIFAPWLGKMSDRFGRR  63
            T+LDA+GIGLIMPVLPTLL EF++ + +A H+GVLLALYA MQVIFAP LG++SD++GR+
Sbjct  12   TVLDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPILGRLSDKYGRK  71

Query  64   PVLLLSLIGASLDYLLLAFSSALWMLYLGRLLSGITGATGAVAASVIADTTSASQRVKWF  123
            P+LL+SL+GA+LDYLL+AFS++LWMLY+GR+++GITGATGAV AS ++D T+A +R + F
Sbjct  72   PILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAVCASAMSDVTPAKNRTRYF  131

Query  124  GWLGASfglgliagpiiggfagEISPHSPFFIAALLNIVTFLVVMFWFRETKNTRDNTDT  183
            G LG++FG+GLI GP++GG+ G+IS+H PF++AA+ + + +++ ++ FRET++ R+   +
Sbjct  132  GFLGGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFRETQK-REALVA  190

Query  184  EVGVETQSNSVYITLFKTMPIL--LIIYFSAQLIGQIPATVWVLFTENRFGWNSMMVGFS  241
            +   E Q+ S  +T+F   ++   L  YF  QLIGQIPAT+WVLFT+ RF+WN+  +G S
Sbjct  191  NRTPENQTASNTVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYRFDWNTTSIGMS  250

Query  242  LAGLGLLHSVFQAFVAGRIATKWGEKTAVLLGFIADSSAFAFLAFISEGWLVFPVlilla  301
            LA LG+L+  FQA+VAG++A KWGEKT+++++   D  +  +LA I++ W+++P LI LA
Sbjct  251  LAVLGVLNIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHVWVILPALICLA  310

Query  302  gggialpalQGVMSIQTKSHQQGALQGLLVSLTNATGVIGPLLFAVIYNHSLPIWDGWIW  361
            +GG++ PALQG +S     + QG LQG LVSLTN TG+IGPLLFA IY+ S++ WDG +W
Sbjct  311  AGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYSYSVAYWDGLLW  370

Query  362  IIGLAFYCIIIL  373
            ++G  +Y ++++
Sbjct  371  LMGAILYAMLLI  382

> NC_016808_R1|83|G76|378774005|YP_005176248.1|Pasteurella_multocida_36950|+|71520..72722|tet(H)|Pmu_03500|tetracycline 
efflux 
protein, class H
Length=400

 Score =  268 bits (1002),  Expect = 4e-73, Method: Compositional matrix adjust.
 Identities = 189/361 (53%), Positives = 282/361 (79%), Gaps = 3/361 (0%)

Query  1    MPVLPTLLREFIASEDIANHFGVLLALYALMQVIFAPWLGKMSDRFGRRPVLLLSLIGAS  60
            MPVLPTLL EF++ + +A H+GVLLALYA MQVIFAP LG++SD++GR+P+LL+SL+GA+
Sbjct  23   MPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPILGRLSDKYGRKPILLFSLLGAA  82

Query  61   LDYLLLAFSSALWMLYLGRLLSGITGATGAVAASVIADTTSASQRVKWFGWLGASfglgl  120
            LDYLL+AFS++LWMLY+GR+++GITGATGAV AS ++D T+A +R + FG LG++FG+GL
Sbjct  83   LDYLLMAFSTTLWMLYIGRIIAGITGATGAVCASAMSDVTPAKNRTRYFGFLGGAFGVGL  142

Query  121  iagpiiggfagEISPHSPFFIAALLNIVAFLVVMFWFRETKNTRDNTDTEVGVETQSNSV  180
            I GP++GG+ G+IS+H PF++AA+ + + +++ ++ FRET++ R+   ++   E Q+ S 
Sbjct  143  IIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFRETQK-REALVANRTPENQTASN  201

Query  181  YITLFKTMPIL--LIIYFSAQLIGQIPATVWVLFTENRFGWNSMMVGFSLAGLGLLHSVF  238
             +T+F   ++   L  YF  QLIGQIPAT+WVLFT+ RF+WN+  +G SLA LG+L+  F
Sbjct  202  TVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYRFDWNTTSIGMSLAVLGVLNIFF  261

Query  239  QAFVAGRIATKWGEKTAVLLGFIADSSAFAFLAFISEGWLVFPVlillagggialpalQG  298
            QA+VAG++A KWGEKT+++++   D  +  +LA I++ W+++P LI LA+GG++ PALQG
Sbjct  262  QAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHVWVILPALICLAAGGMGQPALQG  321

Query  299  VMSIQTKSHQQGALQGLLVSLTNATGVIGPLLFAVIYNHSLPIWDGWIWIIGLAFYCIII  358
             +S     + QG LQG LVSLTN TG+IGPLLFA IY+ S++ WDG +W++G  +Y +++
Sbjct  322  YLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYSYSVAYWDGLLWLMGAILYAMLL  381

Query  359  L  359
            +
Sbjct  382  I  382

> NC_016808_R1|83|G76|378774005|YP_005176248.1|Pasteurella_multocida_36950|+|71520..72722|tet(H)|Pmu_03500|tetracycline 
efflux 
protein, class H
Length=400

 Score =  268 bits (1002),  Expect = 4e-73, Method: Compositional matrix adjust.
 Identities = 189/361 (53%), Positives = 282/361 (79%), Gaps = 3/361 (0%)

Query  1    MPVLPTLLREFIASEDIANHFGVLLALYALMQVIFAPWLGKMSDRFGRRPVLLLSLIGAS  60
            MPVLPTLL EF++ + +A H+GVLLALYA MQVIFAP LG++SD++GR+P+LL+SL+GA+
Sbjct  23   MPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPILGRLSDKYGRKPILLFSLLGAA  82

Query  61   LDYLLLAFSSALWMLYLGRLLSGITGATGAVAASVIADTTSASQRVKWFGWLGASfglgl  120
            LDYLL+AFS++LWMLY+GR+++GITGATGAV AS ++D T+A +R + FG LG++FG+GL
Sbjct  83   LDYLLMAFSTTLWMLYIGRIIAGITGATGAVCASAMSDVTPAKNRTRYFGFLGGAFGVGL  142

Query  121  iagpiiggfagEISPHSPFFIAALLNIVAFLVVMFWFRETKNTRDNTDTEVGVETQSNSV  180
            I GP++GG+ G+IS+H PF++AA+ + + +++ ++ FRET++ R+   ++   E Q+ S 
Sbjct  143  IIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFRETQK-REALVANRTPENQTASN  201

Query  181  YITLFKTMPIL--LIIYFSAQLIGQIPATVWVLFTENRFGWNSMMVGFSLAGLGLLHSVF  238
             +T+F   ++   L  YF  QLIGQIPAT+WVLFT+ RF+WN+  +G SLA LG+L+  F
Sbjct  202  TVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYRFDWNTTSIGMSLAVLGVLNIFF  261

Query  239  QAFVAGRIATKWGEKTAVLLGFIADSSAFAFLAFISEGWLVFPVlillagggialpalQG  298
            QA+VAG++A KWGEKT+++++   D  +  +LA I++ W+++P LI LA+GG++ PALQG
Sbjct  262  QAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHVWVILPALICLAAGGMGQPALQG  321

Query  299  VMSIQTKSHQQGALQGLLVSLTNATGVIGPLLFAVIYNHSLPIWDGWIWIIGLAFYCIII  358
             +S     + QG LQG LVSLTN TG+IGPLLFA IY+ S++ WDG +W++G  +Y +++
Sbjct  322  YLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYSYSVAYWDGLLWLMGAILYAMLL  381

Query  359  L  359
            +
Sbjct  382  I  382

> NC_016808_R1|83|G76|378774005|YP_005176248.1|Pasteurella_multocida_36950|+|71520..72722|tet(H)|Pmu_03500|tetracycline 
efflux 
protein, class H
Length=400

 Score =  268 bits (1002),  Expect = 4e-73, Method: Compositional matrix adjust.
 Identities = 189/361 (53%), Positives = 282/361 (79%), Gaps = 3/361 (0%)

Query  1    MPVLPTLLREFIASEDIANHFGVLLALYALMQVIFAPWLGKMSDRFGRRPVLLLSLIGAS  60
            MPVLPTLL EF++ + +A H+GVLLALYA MQVIFAP LG++SD++GR+P+LL+SL+GA+
Sbjct  23   MPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPILGRLSDKYGRKPILLFSLLGAA  82

Query  61   LDYLLLAFSSALWMLYLGRLLSGITGATGAVAASVIADTTSASQRVKWFGWLGASfglgl  120
            LDYLL+AFS++LWMLY+GR+++GITGATGAV AS ++D T+A +R + FG LG++FG+GL
Sbjct  83   LDYLLMAFSTTLWMLYIGRIIAGITGATGAVCASAMSDVTPAKNRTRYFGFLGGAFGVGL  142

Query  121  iagpiiggfagEISPHSPFFIAALLNIVAFLVVMFWFRETKNTRDNTDTEVGVETQSNSV  180
            I GP++GG+ G+IS+H PF++AA+ + + +++ ++ FRET++ R+   ++   E Q+ S 
Sbjct  143  IIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFRETQK-REALVANRTPENQTASN  201

Query  181  YITLFKTMPIL--LIIYFSAQLIGQIPATVWVLFTENRFGWNSMMVGFSLAGLGLLHSVF  238
             +T+F   ++   L  YF  QLIGQIPAT+WVLFT+ RF+WN+  +G SLA LG+L+  F
Sbjct  202  TVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYRFDWNTTSIGMSLAVLGVLNIFF  261

Query  239  QAFVAGRIATKWGEKTAVLLGFIADSSAFAFLAFISEGWLVFPVlillagggialpalQG  298
            QA+VAG++A KWGEKT+++++   D  +  +LA I++ W+++P LI LA+GG++ PALQG
Sbjct  262  QAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHVWVILPALICLAAGGMGQPALQG  321

Query  299  VMSIQTKSHQQGALQGLLVSLTNATGVIGPLLFAVIYNHSLPIWDGWIWIIGLAFYCIII  358
             +S     + QG LQG LVSLTN TG+IGPLLFA IY+ S++ WDG +W++G  +Y +++
Sbjct  322  YLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYSYSVAYWDGLLWLMGAILYAMLL  381

Query  359  L  359
            +
Sbjct  382  I  382

> NC_016808_R1|83|G76|378774005|YP_005176248.1|Pasteurella_multocida_36950|+|71520..72722|tet(H)|Pmu_03500|tetracycline 
efflux 
protein, class H
Length=400

 Score =  265 bits (990),  Expect = 4e-72, Method: Compositional matrix adjust.
 Identities = 181/365 (50%), Positives = 277/365 (76%), Gaps = 3/365 (0%)

Query  14   LDAMGLGLIMPVLPTLLRELVPAEQVAGHYGALLSLYALMQVVFAPMLGQLSDSYGRRPV  73
            LDA+G+GLIMPVLPTLL E+V+ + +A HYG LL+LYA MQV+FAP+LG+LSD YGR+P+
Sbjct  14   LDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPILGRLSDKYGRKPI  73

Query  74   LLASLAGAAVDYTIMASAPVLWVLYIGRLvsgvtgatgavaastIADSTGEGSRARWFGY  133
            LL SL GAA+DY +MA +  LW+LYIGR+++G+TGATGAV AS+++D T   +R+R FG+
Sbjct  74   LLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAVCASAMSDVTPAKNRTRYFGF  133

Query  134  MGACYGAGMIAGPALGGMLGGISAHAPfiaaallngfafllaCIFLKETHHSHGGTGKPV  193
            +G+ +G G+I GP LGG+LG+ISAH PFI AA+ +++ ++L+ +F++ET+  ++  ++  
Sbjct  134  LGGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFRETQKREALVANRT  193

Query  194  RIKPFVllrlddalrglgalF--AVFFIIQLIGQVPAALWVIYGEDRFQWNTATVGLSLA  251
              +          +   +  F  A +FIIQLIGQ+PA++WV++ + RF+WNT+++G+SLA
Sbjct  194  PENQ-TASNTVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYRFDWNTTSIGMSLA  252

Query  252  AFGATHAIFQAFVTGPLSSRLGERRTLLFGMAADATGFVLLAFATQGWMVFPILLLLAAG  311
             +G  + +FQA+V+G L+ + GE+ T++++M+ D  G +LLA   + W+++P L+ LAAG
Sbjct  253  VLGVLNIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHVWVILPALICLAAG  312

Query  312  GVGMPALQAMLSNNVSSNKQGALQGTLTSLTNLSSIAGPLGFTALYSATAGAWNGWVWIV  371
            G+G PALQ+ LS++V  N QG LQGTL SLTN+++I GPL F+ +YS + + W+G +W++
Sbjct  313  GMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYSYSVAYWDGLLWLM  372

Query  372  GAILY  376
            GAILY
Sbjct  373  GAILY  377

> NC_016808_R1|83|G76|378774005|YP_005176248.1|Pasteurella_multocida_36950|+|71520..72722|tet(H)|Pmu_03500|tetracycline 
efflux 
protein, class H
Length=400

 Score =  265 bits (990),  Expect = 4e-72, Method: Compositional matrix adjust.
 Identities = 181/365 (50%), Positives = 277/365 (76%), Gaps = 3/365 (0%)

Query  14   LDAMGLGLIMPVLPTLLRELVPAEQVAGHYGALLSLYALMQVVFAPMLGQLSDSYGRRPV  73
            LDA+G+GLIMPVLPTLL E+V+ + +A HYG LL+LYA MQV+FAP+LG+LSD YGR+P+
Sbjct  14   LDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPILGRLSDKYGRKPI  73

Query  74   LLASLAGAAVDYTIMASAPVLWVLYIGRLvsgvtgatgavaastIADSTGEGSRARWFGY  133
            LL SL GAA+DY +MA +  LW+LYIGR+++G+TGATGAV AS+++D T   +R+R FG+
Sbjct  74   LLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAVCASAMSDVTPAKNRTRYFGF  133

Query  134  MGACYGAGMIAGPALGGMLGGISAHAPfiaaallngfafllaCIFLKETHHSHGGTGKPV  193
            +G+ +G G+I GP LGG+LG+ISAH PFI AA+ +++ ++L+ +F++ET+  ++  ++  
Sbjct  134  LGGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFRETQKREALVANRT  193

Query  194  RIKPFVllrlddalrglgalF--AVFFIIQLIGQVPAALWVIYGEDRFQWNTATVGLSLA  251
              +          +   +  F  A +FIIQLIGQ+PA++WV++ + RF+WNT+++G+SLA
Sbjct  194  PENQ-TASNTVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYRFDWNTTSIGMSLA  252

Query  252  AFGATHAIFQAFVTGPLSSRLGERRTLLFGMAADATGFVLLAFATQGWMVFPILLLLAAG  311
             +G  + +FQA+V+G L+ + GE+ T++++M+ D  G +LLA   + W+++P L+ LAAG
Sbjct  253  VLGVLNIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHVWVILPALICLAAG  312

Query  312  GVGMPALQAMLSNNVSSNKQGALQGTLTSLTNLSSIAGPLGFTALYSATAGAWNGWVWIV  371
            G+G PALQ+ LS++V  N QG LQGTL SLTN+++I GPL F+ +YS + + W+G +W++
Sbjct  313  GMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYSYSVAYWDGLLWLM  372

Query  372  GAILY  376
            GAILY
Sbjct  373  GAILY  377

> NC_016808_R1|83|G76|378774005|YP_005176248.1|Pasteurella_multocida_36950|+|71520..72722|tet(H)|Pmu_03500|tetracycline 
efflux 
protein, class H
Length=400

 Score =  254 bits (947),  Expect = 1e-68, Method: Compositional matrix adjust.
 Identities = 178/380 (47%), Positives = 289/380 (77%), Gaps = 9/380 (2%)

Query  29   NRPLIVILSTVALDAVGIGLIMPVLPGLLRDLVHSNDVAAHYGILLALYALMQFACAPVL  88
            N+++I+IL    LDA+GIGLIMPVLP LL ++V  N +A+HYG+LLALYA MQ   AP+L
Sbjct  2    NKSIIIILLITVLDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPIL  61

Query  89   GALSDRFGRRPVLLVSLAGAAVDYAIMATAPFLWVLYigrivagitgatgavagayiaDI  148
            G LSD++GR+P+LL SL GAA+DY +MA +  LW+LYIGRI+AGITGATGAV ++ ++D+
Sbjct  62   GRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAVCASAMSDV  121

Query  149  TDGDERARHFGFMSACFGFGMVAGPVLGGLMGGFSPHapffaaaalnglnflTGCFLLPE  208
            T + +R+R FGF+++ FG G++ GP+LGGL+G++S+H PF+ AA  +++ ++ + +++ E
Sbjct  122  TPAKNRTRYFGFLGGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFRE  181

Query  209  SHK-----GERRPLRREALNPLASFRWARGMTVVAALMAVFFIMQLVGQVPAALWVIFGE  263
            ++K     ++R P  + A N ++ F   +++      +A +FI+QL+GQ+PA++WV+F +
Sbjct  182  TQKREALVANRTPENQTASNTVTVF-FKKSLYF---WLATYFIIQLIGQIPATIWVLFTQ  237

Query  264  DRFHWDATTIGISLAAFGILHSLAQAMITGPVAARLGERRALMLGMIADGTGYILLAFAT  323
             RF+W++T+IG+SLA +G+L+ + QA+++G +A + GE+ ++M++M  D  G +LLA   
Sbjct  238  YRFDWNTTSIGMSLAVLGVLNIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIG  297

Query  324  RGWMAFPIMVLLASGGIGMPALQAMLSRQVDEERQGQLQGSLAALTSLTSIVGPLLFTAI  383
            + W+ +P ++ LA+GG+G PALQ+ LS+ VD++ QG+LQG+L +LT++T+I+GPLLF+ I
Sbjct  298  HVWVILPALICLAAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFI  357

Query  384  YAASITTWNGWAWIAGAALY  403
            Y+ S++ W+G  W+ GA LY
Sbjct  358  YSYSVAYWDGLLWLMGAILY  377

> NC_016808_R1|83|G76|378774005|YP_005176248.1|Pasteurella_multocida_36950|+|71520..72722|tet(H)|Pmu_03500|tetracycline 
efflux 
protein, class H
Length=400

 Score =  253 bits (946),  Expect = 1e-68, Method: Compositional matrix adjust.
 Identities = 177/380 (47%), Positives = 289/380 (77%), Gaps = 9/380 (2%)

Query  29   NRPLIVILSTVALDAVGIGLIMPVLPGLLRDLVHSNDVTAHYGILLALYALMQFACAPVL  88
            N+++I+IL    LDA+GIGLIMPVLP LL ++V  N +++HYG+LLALYA MQ   AP+L
Sbjct  2    NKSIIIILLITVLDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPIL  61

Query  89   GALSDRFGRRPVLLVSLAGAAVDYAIMATAPFLWVLYigrivagitgatgavagayiaDI  148
            G LSD++GR+P+LL SL GAA+DY +MA +  LW+LYIGRI+AGITGATGAV ++ ++D+
Sbjct  62   GRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAVCASAMSDV  121

Query  149  TDGDERARHFGFMSACFGFGMVAGPVLGGLMGGFSPHapffaaaalnglnflTGCFLLPE  208
            T + +R+R FGF+++ FG G++ GP+LGGL+G++S+H PF+ AA  +++ ++ + +++ E
Sbjct  122  TPAKNRTRYFGFLGGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFRE  181

Query  209  SHK-----GERRPLRREALNPLASFRWARGMTVVAALMAVFFIMQLVGQVPAALWVIFGE  263
            ++K     ++R P  + A N ++ F   +++      +A +FI+QL+GQ+PA++WV+F +
Sbjct  182  TQKREALVANRTPENQTASNTVTVF-FKKSLYF---WLATYFIIQLIGQIPATIWVLFTQ  237

Query  264  DRFHWDATTIGISLAAFGILHSLAQAMITGPVAARLGERRALMLGMIADGTGYILLAFAT  323
             RF+W++T+IG+SLA +G+L+ + QA+++G +A + GE+ ++M++M  D  G +LLA   
Sbjct  238  YRFDWNTTSIGMSLAVLGVLNIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIG  297

Query  324  RGWMAFPIMVLLASGGIGMPALQAMLSRQVDEERQGQLQGSLAALTSLTSIVGPLLFTAI  383
            + W+ +P ++ LA+GG+G PALQ+ LS+ VD++ QG+LQG+L +LT++T+I+GPLLF+ I
Sbjct  298  HVWVILPALICLAAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFI  357

Query  384  YAASITTWNGWAWIAGAALY  403
            Y+ S++ W+G  W+ GA LY
Sbjct  358  YSYSVAYWDGLLWLMGAILY  377

> NC_016808_R1|83|G76|378774005|YP_005176248.1|Pasteurella_multocida_36950|+|71520..72722|tet(H)|Pmu_03500|tetracycline 
efflux 
protein, class H
Length=400

 Score =  253 bits (946),  Expect = 1e-68, Method: Compositional matrix adjust.
 Identities = 177/380 (47%), Positives = 289/380 (77%), Gaps = 9/380 (2%)

Query  29   NRPLIVILSTVALDAVGIGLIMPVLPGLLRDLVHSNDVTAHYGILLALYALMQFACAPVL  88
            N+++I+IL    LDA+GIGLIMPVLP LL ++V  N +++HYG+LLALYA MQ   AP+L
Sbjct  2    NKSIIIILLITVLDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPIL  61

Query  89   GALSDRFGRRPVLLVSLAGAAVDYAIMATAPFLWVLYigrivagitgatgavagayiaDI  148
            G LSD++GR+P+LL SL GAA+DY +MA +  LW+LYIGRI+AGITGATGAV ++ ++D+
Sbjct  62   GRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAVCASAMSDV  121

Query  149  TDGDERARHFGFMSACFGFGMVAGPVLGGLMGGFSPHapffaaaalnglnflTGCFLLPE  208
            T + +R+R FGF+++ FG G++ GP+LGGL+G++S+H PF+ AA  +++ ++ + +++ E
Sbjct  122  TPAKNRTRYFGFLGGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFRE  181

Query  209  SHK-----GERRPLRREALNPLASFRWARGMTVVAALMAVFFIMQLVGQVPAALWVIFGE  263
            ++K     ++R P  + A N ++ F   +++      +A +FI+QL+GQ+PA++WV+F +
Sbjct  182  TQKREALVANRTPENQTASNTVTVF-FKKSLYF---WLATYFIIQLIGQIPATIWVLFTQ  237

Query  264  DRFHWDATTIGISLAAFGILHSLAQAMITGPVAARLGERRALMLGMIADGTGYILLAFAT  323
             RF+W++T+IG+SLA +G+L+ + QA+++G +A + GE+ ++M++M  D  G +LLA   
Sbjct  238  YRFDWNTTSIGMSLAVLGVLNIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIG  297

Query  324  RGWMAFPIMVLLASGGIGMPALQAMLSRQVDEERQGQLQGSLAALTSLTSIVGPLLFTAI  383
            + W+ +P ++ LA+GG+G PALQ+ LS+ VD++ QG+LQG+L +LT++T+I+GPLLF+ I
Sbjct  298  HVWVILPALICLAAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFI  357

Query  384  YAASITTWNGWAWIAGAALY  403
            Y+ S++ W+G  W+ GA LY
Sbjct  358  YSYSVAYWDGLLWLMGAILY  377

> NC_016808_R1|83|G76|378774005|YP_005176248.1|Pasteurella_multocida_36950|+|71520..72722|tet(H)|Pmu_03500|tetracycline 
efflux 
protein, class H
Length=400

 Score =  253 bits (946),  Expect = 1e-68, Method: Compositional matrix adjust.
 Identities = 177/380 (47%), Positives = 289/380 (77%), Gaps = 9/380 (2%)

Query  29   NRPLIVILSTVALDAVGIGLIMPVLPGLLRDLVHSNDVTAHYGILLALYALMQFACAPVL  88
            N+++I+IL    LDA+GIGLIMPVLP LL ++V  N +++HYG+LLALYA MQ   AP+L
Sbjct  2    NKSIIIILLITVLDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPIL  61

Query  89   GALSDRFGRRPVLLVSLAGAAVDYAIMATAPFLWVLYigrivagitgatgavagayiaDI  148
            G LSD++GR+P+LL SL GAA+DY +MA +  LW+LYIGRI+AGITGATGAV ++ ++D+
Sbjct  62   GRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAVCASAMSDV  121

Query  149  TDGDERARHFGFMSACFGFGMVAGPVLGGLMGGFSPHapffaaaalnglnflTGCFLLPE  208
            T + +R+R FGF+++ FG G++ GP+LGGL+G++S+H PF+ AA  +++ ++ + +++ E
Sbjct  122  TPAKNRTRYFGFLGGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFRE  181

Query  209  SHK-----GERRPLRREALNPLASFRWARGMTVVAALMAVFFIMQLVGQVPAALWVIFGE  263
            ++K     ++R P  + A N ++ F   +++      +A +FI+QL+GQ+PA++WV+F +
Sbjct  182  TQKREALVANRTPENQTASNTVTVF-FKKSLYF---WLATYFIIQLIGQIPATIWVLFTQ  237

Query  264  DRFHWDATTIGISLAAFGILHSLAQAMITGPVAARLGERRALMLGMIADGTGYILLAFAT  323
             RF+W++T+IG+SLA +G+L+ + QA+++G +A + GE+ ++M++M  D  G +LLA   
Sbjct  238  YRFDWNTTSIGMSLAVLGVLNIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIG  297

Query  324  RGWMAFPIMVLLASGGIGMPALQAMLSRQVDEERQGQLQGSLAALTSLTSIVGPLLFTAI  383
            + W+ +P ++ LA+GG+G PALQ+ LS+ VD++ QG+LQG+L +LT++T+I+GPLLF+ I
Sbjct  298  HVWVILPALICLAAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFI  357

Query  384  YAASITTWNGWAWIAGAALY  403
            Y+ S++ W+G  W+ GA LY
Sbjct  358  YSYSVAYWDGLLWLMGAILY  377

> NC_016808_R1|83|G76|378774005|YP_005176248.1|Pasteurella_multocida_36950|+|71520..72722|tet(H)|Pmu_03500|tetracycline 
efflux 
protein, class H
Length=400

 Score =  253 bits (946),  Expect = 1e-68, Method: Compositional matrix adjust.
 Identities = 177/380 (47%), Positives = 289/380 (77%), Gaps = 9/380 (2%)

Query  29   NRPLIVILSTVALDAVGIGLIMPVLPGLLRDLVHSNDVTAHYGILLALYALMQFACAPVL  88
            N+++I+IL    LDA+GIGLIMPVLP LL ++V  N +++HYG+LLALYA MQ   AP+L
Sbjct  2    NKSIIIILLITVLDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPIL  61

Query  89   GALSDRFGRRPVLLVSLAGAAVDYAIMATAPFLWVLYigrivagitgatgavagayiaDI  148
            G LSD++GR+P+LL SL GAA+DY +MA +  LW+LYIGRI+AGITGATGAV ++ ++D+
Sbjct  62   GRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAVCASAMSDV  121

Query  149  TDGDERARHFGFMSACFGFGMVAGPVLGGLMGGFSPHapffaaaalnglnflTGCFLLPE  208
            T + +R+R FGF+++ FG G++ GP+LGGL+G++S+H PF+ AA  +++ ++ + +++ E
Sbjct  122  TPAKNRTRYFGFLGGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFRE  181

Query  209  SHK-----GERRPLRREALNPLASFRWARGMTVVAALMAVFFIMQLVGQVPAALWVIFGE  263
            ++K     ++R P  + A N ++ F   +++      +A +FI+QL+GQ+PA++WV+F +
Sbjct  182  TQKREALVANRTPENQTASNTVTVF-FKKSLYF---WLATYFIIQLIGQIPATIWVLFTQ  237

Query  264  DRFHWDATTIGISLAAFGILHSLAQAMITGPVAARLGERRALMLGMIADGTGYILLAFAT  323
             RF+W++T+IG+SLA +G+L+ + QA+++G +A + GE+ ++M++M  D  G +LLA   
Sbjct  238  YRFDWNTTSIGMSLAVLGVLNIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIG  297

Query  324  RGWMAFPIMVLLASGGIGMPALQAMLSRQVDEERQGQLQGSLAALTSLTSIVGPLLFTAI  383
            + W+ +P ++ LA+GG+G PALQ+ LS+ VD++ QG+LQG+L +LT++T+I+GPLLF+ I
Sbjct  298  HVWVILPALICLAAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFI  357

Query  384  YAASITTWNGWAWIAGAALY  403
            Y+ S++ W+G  W+ GA LY
Sbjct  358  YSYSVAYWDGLLWLMGAILY  377

> NC_016808_R1|83|G76|378774005|YP_005176248.1|Pasteurella_multocida_36950|+|71520..72722|tet(H)|Pmu_03500|tetracycline 
efflux 
protein, class H
Length=400

 Score =  253 bits (945),  Expect = 1e-68, Method: Compositional matrix adjust.
 Identities = 177/380 (47%), Positives = 289/380 (77%), Gaps = 9/380 (2%)

Query  29   NRPLIVILSTVALDAVGIGLIMPVLPGLLRDLVHSNDVTAHYGILLALYALMQFACAPVL  88
            N+++I+IL    LDA+GIGLIMPVLP LL ++V  N +++HYG+LLALYA MQ   AP+L
Sbjct  2    NKSIIIILLITVLDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPIL  61

Query  89   GALSDRFGRRPVLLVSLAGAAVDYAIMATAPFLWVLYigrivagitgatgavagayiaDI  148
            G LSD++GR+P+LL SL GAA+DY +MA +  LW+LYIGRI+AGITGATGAV ++ ++D+
Sbjct  62   GRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAVCASAMSDV  121

Query  149  TDGDERARHFGFMSACFGFGMVAGPVLGGLMGGFSPHapffaaaalnglnflTGCFLLPE  208
            T + +R+R FGF+++ FG G++ GP+LGGL+G++S+H PF+ AA  +++ ++ + +++ E
Sbjct  122  TPAKNRTRYFGFLGGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFRE  181

Query  209  SHK-----GERRPLRREALNPLASFRWARGMTVVAALMAVFFIMQLVGQVPAALWVIFGE  263
            ++K     ++R P  + A N ++ F   +++      +A +FI+QL+GQ+PA++WV+F +
Sbjct  182  TQKREALVANRTPENQTASNTVTVF-FKKSLYF---WLATYFIIQLIGQIPATIWVLFTQ  237

Query  264  DRFHWDATTIGISLAAFGILHSLAQAMITGPVAARLGERRALMLGMIADGTGYILLAFAT  323
             RF+W++T+IG+SLA +G+L+ + QA+++G +A + GE+ ++M++M  D  G +LLA   
Sbjct  238  YRFDWNTTSIGMSLAVLGVLNIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIG  297

Query  324  RGWMAFPIMVLLASGGIGMPALQAMLSRQVDEERQGQLQGSLAALTSLTSIVGPLLFTAI  383
            + W+ +P ++ LA+GG+G PALQ+ LS+ VD++ QG+LQG+L +LT++T+I+GPLLF+ I
Sbjct  298  HVWVILPALICLAAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFI  357

Query  384  YAASITTWNGWAWIAGAALY  403
            Y+ S++ W+G  W+ GA LY
Sbjct  358  YSYSVAYWDGLLWLMGAILY  377

> NC_016808_R1|83|G76|378774005|YP_005176248.1|Pasteurella_multocida_36950|+|71520..72722|tet(H)|Pmu_03500|tetracycline 
efflux 
protein, class H
Length=400

 Score =  253 bits (946),  Expect = 1e-68, Method: Compositional matrix adjust.
 Identities = 177/380 (47%), Positives = 289/380 (77%), Gaps = 9/380 (2%)

Query  29   NRPLIVILSTVALDAVGIGLIMPVLPGLLRDLVHSNDVTAHYGILLALYALMQFACAPVL  88
            N+++I+IL    LDA+GIGLIMPVLP LL ++V  N +++HYG+LLALYA MQ   AP+L
Sbjct  2    NKSIIIILLITVLDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPIL  61

Query  89   GALSDRFGRRPVLLVSLAGAAVDYAIMATAPFLWVLYigrivagitgatgavagayiaDI  148
            G LSD++GR+P+LL SL GAA+DY +MA +  LW+LYIGRI+AGITGATGAV ++ ++D+
Sbjct  62   GRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAVCASAMSDV  121

Query  149  TDGDERARHFGFMSACFGFGMVAGPVLGGLMGGFSPHapffaaaalnglnflTGCFLLPE  208
            T + +R+R FGF+++ FG G++ GP+LGGL+G++S+H PF+ AA  +++ ++ + +++ E
Sbjct  122  TPAKNRTRYFGFLGGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFRE  181

Query  209  SHK-----GERRPLRREALNPLASFRWARGMTVVAALMAVFFIMQLVGQVPAALWVIFGE  263
            ++K     ++R P  + A N ++ F   +++      +A +FI+QL+GQ+PA++WV+F +
Sbjct  182  TQKREALVANRTPENQTASNTVTVF-FKKSLYF---WLATYFIIQLIGQIPATIWVLFTQ  237

Query  264  DRFHWDATTIGISLAAFGILHSLAQAMITGPVAARLGERRALMLGMIADGTGYILLAFAT  323
             RF+W++T+IG+SLA +G+L+ + QA+++G +A + GE+ ++M++M  D  G +LLA   
Sbjct  238  YRFDWNTTSIGMSLAVLGVLNIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIG  297

Query  324  RGWMAFPIMVLLASGGIGMPALQAMLSRQVDEERQGQLQGSLAALTSLTSIVGPLLFTAI  383
            + W+ +P ++ LA+GG+G PALQ+ LS+ VD++ QG+LQG+L +LT++T+I+GPLLF+ I
Sbjct  298  HVWVILPALICLAAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFI  357

Query  384  YAASITTWNGWAWIAGAALY  403
            Y+ S++ W+G  W+ GA LY
Sbjct  358  YSYSVAYWDGLLWLMGAILY  377

> NC_016808_R1|83|G76|378774005|YP_005176248.1|Pasteurella_multocida_36950|+|71520..72722|tet(H)|Pmu_03500|tetracycline 
efflux 
protein, class H
Length=400

 Score =  253 bits (945),  Expect = 1e-68, Method: Compositional matrix adjust.
 Identities = 177/380 (47%), Positives = 289/380 (77%), Gaps = 9/380 (2%)

Query  29   NRPLIVILSTVALDAVGIGLIMPVLPGLLRDLVHSNDVTAHYGILLALYALMQFACAPVL  88
            N+++I+IL    LDA+GIGLIMPVLP LL ++V  N +++HYG+LLALYA MQ   AP+L
Sbjct  2    NKSIIIILLITVLDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPIL  61

Query  89   GALSDRFGRRPVLLVSLAGAAVDYAIMATAPFLWVLYigrivagitgatgavagayiaDI  148
            G LSD++GR+P+LL SL GAA+DY +MA +  LW+LYIGRI+AGITGATGAV ++ ++D+
Sbjct  62   GRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAVCASAMSDV  121

Query  149  TDGDERARHFGFMSACFGFGMVAGPVLGGLMGGFSPHapffaaaalnglnflTGCFLLPE  208
            T + +R+R FGF+++ FG G++ GP+LGGL+G++S+H PF+ AA  +++ ++ + +++ E
Sbjct  122  TPAKNRTRYFGFLGGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFRE  181

Query  209  SHK-----GERRPLRREALNPLASFRWARGMTVVAALMAVFFIMQLVGQVPAALWVIFGE  263
            ++K     ++R P  + A N ++ F   +++      +A +FI+QL+GQ+PA++WV+F +
Sbjct  182  TQKREALVANRTPENQTASNTVTVF-FKKSLYF---WLATYFIIQLIGQIPATIWVLFTQ  237

Query  264  DRFHWDATTIGISLAAFGILHSLAQAMITGPVAARLGERRALMLGMIADGTGYILLAFAT  323
             RF+W++T+IG+SLA +G+L+ + QA+++G +A + GE+ ++M++M  D  G +LLA   
Sbjct  238  YRFDWNTTSIGMSLAVLGVLNIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIG  297

Query  324  RGWMAFPIMVLLASGGIGMPALQAMLSRQVDEERQGQLQGSLAALTSLTSIVGPLLFTAI  383
            + W+ +P ++ LA+GG+G PALQ+ LS+ VD++ QG+LQG+L +LT++T+I+GPLLF+ I
Sbjct  298  HVWVILPALICLAAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFI  357

Query  384  YAASITTWNGWAWIAGAALY  403
            Y+ S++ W+G  W+ GA LY
Sbjct  358  YSYSVAYWDGLLWLMGAILY  377

> NC_016808_R1|83|G76|378774005|YP_005176248.1|Pasteurella_multocida_36950|+|71520..72722|tet(H)|Pmu_03500|tetracycline 
efflux 
protein, class H
Length=400

 Score =  253 bits (946),  Expect = 1e-68, Method: Compositional matrix adjust.
 Identities = 177/380 (47%), Positives = 289/380 (77%), Gaps = 9/380 (2%)

Query  29   NRPLIVILSTVALDAVGIGLIMPVLPGLLRDLVHSNDVTAHYGILLALYALMQFACAPVL  88
            N+++I+IL    LDA+GIGLIMPVLP LL ++V  N +++HYG+LLALYA MQ   AP+L
Sbjct  2    NKSIIIILLITVLDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPIL  61

Query  89   GALSDRFGRRPVLLVSLAGAAVDYAIMATAPFLWVLYigrivagitgatgavagayiaDI  148
            G LSD++GR+P+LL SL GAA+DY +MA +  LW+LYIGRI+AGITGATGAV ++ ++D+
Sbjct  62   GRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAVCASAMSDV  121

Query  149  TDGDERARHFGFMSACFGFGMVAGPVLGGLMGGFSPHapffaaaalnglnflTGCFLLPE  208
            T + +R+R FGF+++ FG G++ GP+LGGL+G++S+H PF+ AA  +++ ++ + +++ E
Sbjct  122  TPAKNRTRYFGFLGGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFRE  181

Query  209  SHK-----GERRPLRREALNPLASFRWARGMTVVAALMAVFFIMQLVGQVPAALWVIFGE  263
            ++K     ++R P  + A N ++ F   +++      +A +FI+QL+GQ+PA++WV+F +
Sbjct  182  TQKREALVANRTPENQTASNTVTVF-FKKSLYF---WLATYFIIQLIGQIPATIWVLFTQ  237

Query  264  DRFHWDATTIGISLAAFGILHSLAQAMITGPVAARLGERRALMLGMIADGTGYILLAFAT  323
             RF+W++T+IG+SLA +G+L+ + QA+++G +A + GE+ ++M++M  D  G +LLA   
Sbjct  238  YRFDWNTTSIGMSLAVLGVLNIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIG  297

Query  324  RGWMAFPIMVLLASGGIGMPALQAMLSRQVDEERQGQLQGSLAALTSLTSIVGPLLFTAI  383
            + W+ +P ++ LA+GG+G PALQ+ LS+ VD++ QG+LQG+L +LT++T+I+GPLLF+ I
Sbjct  298  HVWVILPALICLAAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFI  357

Query  384  YAASITTWNGWAWIAGAALY  403
            Y+ S++ W+G  W+ GA LY
Sbjct  358  YSYSVAYWDGLLWLMGAILY  377

> NC_016808_R1|83|G76|378774005|YP_005176248.1|Pasteurella_multocida_36950|+|71520..72722|tet(H)|Pmu_03500|tetracycline 
efflux 
protein, class H
Length=400

 Score =  253 bits (945),  Expect = 1e-68, Method: Compositional matrix adjust.
 Identities = 177/380 (47%), Positives = 289/380 (77%), Gaps = 9/380 (2%)

Query  29   NRPLIVILSTVALDAVGIGLIMPVLPGLLRDLVHSNDVTAHYGILLALYALMQFACAPVL  88
            N+++I+IL    LDA+GIGLIMPVLP LL ++V  N +++HYG+LLALYA MQ   AP+L
Sbjct  2    NKSIIIILLITVLDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPIL  61

Query  89   GALSDRFGRRPVLLVSLAGAAVDYAIMATAPFLWVLYigrivagitgatgavagayiaDI  148
            G LSD++GR+P+LL SL GAA+DY +MA +  LW+LYIGRI+AGITGATGAV ++ ++D+
Sbjct  62   GRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAVCASAMSDV  121

Query  149  TDGDERARHFGFMSACFGFGMVAGPVLGGLMGGFSPHapffaaaalnglnflTGCFLLPE  208
            T + +R+R FGF+++ FG G++ GP+LGGL+G++S+H PF+ AA  +++ ++ + +++ E
Sbjct  122  TPAKNRTRYFGFLGGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFRE  181

Query  209  SHK-----GERRPLRREALNPLASFRWARGMTVVAALMAVFFIMQLVGQVPAALWVIFGE  263
            ++K     ++R P  + A N ++ F   +++      +A +FI+QL+GQ+PA++WV+F +
Sbjct  182  TQKREALVANRTPENQTASNTVTVF-FKKSLYF---WLATYFIIQLIGQIPATIWVLFTQ  237

Query  264  DRFHWDATTIGISLAAFGILHSLAQAMITGPVAARLGERRALMLGMIADGTGYILLAFAT  323
             RF+W++T+IG+SLA +G+L+ + QA+++G +A + GE+ ++M++M  D  G +LLA   
Sbjct  238  YRFDWNTTSIGMSLAVLGVLNIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIG  297

Query  324  RGWMAFPIMVLLASGGIGMPALQAMLSRQVDEERQGQLQGSLAALTSLTSIVGPLLFTAI  383
            + W+ +P ++ LA+GG+G PALQ+ LS+ VD++ QG+LQG+L +LT++T+I+GPLLF+ I
Sbjct  298  HVWVILPALICLAAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFI  357

Query  384  YAASITTWNGWAWIAGAALY  403
            Y+ S++ W+G  W+ GA LY
Sbjct  358  YSYSVAYWDGLLWLMGAILY  377

> NC_016808_R1|83|G76|378774005|YP_005176248.1|Pasteurella_multocida_36950|+|71520..72722|tet(H)|Pmu_03500|tetracycline 
efflux 
protein, class H
Length=400

 Score =  253 bits (946),  Expect = 1e-68, Method: Compositional matrix adjust.
 Identities = 177/380 (47%), Positives = 289/380 (77%), Gaps = 9/380 (2%)

Query  29   NRPLIVILSTVALDAVGIGLIMPVLPGLLRDLVHSNDVTAHYGILLALYALMQFACAPVL  88
            N+++I+IL    LDA+GIGLIMPVLP LL ++V  N +++HYG+LLALYA MQ   AP+L
Sbjct  2    NKSIIIILLITVLDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPIL  61

Query  89   GALSDRFGRRPVLLVSLAGAAVDYAIMATAPFLWVLYigrivagitgatgavagayiaDI  148
            G LSD++GR+P+LL SL GAA+DY +MA +  LW+LYIGRI+AGITGATGAV ++ ++D+
Sbjct  62   GRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAVCASAMSDV  121

Query  149  TDGDERARHFGFMSACFGFGMVAGPVLGGLMGGFSPHapffaaaalnglnflTGCFLLPE  208
            T + +R+R FGF+++ FG G++ GP+LGGL+G++S+H PF+ AA  +++ ++ + +++ E
Sbjct  122  TPAKNRTRYFGFLGGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFRE  181

Query  209  SHK-----GERRPLRREALNPLASFRWARGMTVVAALMAVFFIMQLVGQVPAALWVIFGE  263
            ++K     ++R P  + A N ++ F   +++      +A +FI+QL+GQ+PA++WV+F +
Sbjct  182  TQKREALVANRTPENQTASNTVTVF-FKKSLYF---WLATYFIIQLIGQIPATIWVLFTQ  237

Query  264  DRFHWDATTIGISLAAFGILHSLAQAMITGPVAARLGERRALMLGMIADGTGYILLAFAT  323
             RF+W++T+IG+SLA +G+L+ + QA+++G +A + GE+ ++M++M  D  G +LLA   
Sbjct  238  YRFDWNTTSIGMSLAVLGVLNIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIG  297

Query  324  RGWMAFPIMVLLASGGIGMPALQAMLSRQVDEERQGQLQGSLAALTSLTSIVGPLLFTAI  383
            + W+ +P ++ LA+GG+G PALQ+ LS+ VD++ QG+LQG+L +LT++T+I+GPLLF+ I
Sbjct  298  HVWVILPALICLAAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFI  357

Query  384  YAASITTWNGWAWIAGAALY  403
            Y+ S++ W+G  W+ GA LY
Sbjct  358  YSYSVAYWDGLLWLMGAILY  377

> NC_016808_R1|83|G76|378774005|YP_005176248.1|Pasteurella_multocida_36950|+|71520..72722|tet(H)|Pmu_03500|tetracycline 
efflux 
protein, class H
Length=400

 Score =  252 bits (941),  Expect = 3e-68, Method: Compositional matrix adjust.
 Identities = 177/380 (47%), Positives = 289/380 (77%), Gaps = 9/380 (2%)

Query  4    NRPLIVILSTVALDAVGIGLIMPVLPGLLRDLVHSNDVTAHYGILLALYALMQFACAPVL  63
            N+++I+IL    LDA+GIGLIMPVLP LL ++V  N +++HYG+LLALYA MQ   AP+L
Sbjct  2    NKSIIIILLITVLDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPIL  61

Query  64   GALSDRFGRRPVLLVSLAGAAVDYAIMATAPFLWVLYigrivagitgatgavagayiaDI  123
            G LSD++GR+P+LL SL GAA+DY +MA +  LW+LYIGRI+AGITGATGAV ++ ++D+
Sbjct  62   GRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAVCASAMSDV  121

Query  124  TDGDERARHFGFMSACFGFGMVAGPVLGGLMGGFSPHapffaaaalnglnflTGCFLLPE  183
            T + +R+R FGF+++ FG G++ GP+LGGL+G++S+H PF+ AA  +++ ++ + +++ E
Sbjct  122  TPAKNRTRYFGFLGGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFRE  181

Query  184  SHK-----GERRPLRREALNPLASFRWARGMTVVAALMAVFFIMQLVGQVPAALWVIFGE  238
            ++K     ++R P  + A N ++ F   +++      +A +FI+QL+GQ+PA++WV+F +
Sbjct  182  TQKREALVANRTPENQTASNTVTVF-FKKSLYF---WLATYFIIQLIGQIPATIWVLFTQ  237

Query  239  DRFHWDATTIGISLAAFGILHSLAQAMITGPVAARLGERRALMLGMIADGTGYILLAFAT  298
             RF+W++T+IG+SLA +G+L+ + QA+++G +A + GE+ ++M++M  D  G +LLA   
Sbjct  238  YRFDWNTTSIGMSLAVLGVLNIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIG  297

Query  299  RGWMAFPIMVLLASGGIGMPALQAMLSRQVDEERQGQLQGSLAALTSLTSIVGPLLFTAI  358
            + W+ +P ++ LA+GG+G PALQ+ LS+ VD++ QG+LQG+L +LT++T+I+GPLLF+ I
Sbjct  298  HVWVILPALICLAAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFI  357

Query  359  YAASITTWNGWAWIAGAALY  378
            Y+ S++ W+G  W+ GA LY
Sbjct  358  YSYSVAYWDGLLWLMGAILY  377

> NC_016808_R1|83|G76|378774005|YP_005176248.1|Pasteurella_multocida_36950|+|71520..72722|tet(H)|Pmu_03500|tetracycline 
efflux 
protein, class H
Length=400

 Score =  252 bits (941),  Expect = 3e-68, Method: Compositional matrix adjust.
 Identities = 177/380 (47%), Positives = 289/380 (77%), Gaps = 9/380 (2%)

Query  4    NRPLIVILSTVALDAVGIGLIMPVLPGLLRDLVHSNDVTAHYGILLALYALMQFACAPVL  63
            N+++I+IL    LDA+GIGLIMPVLP LL ++V  N +++HYG+LLALYA MQ   AP+L
Sbjct  2    NKSIIIILLITVLDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPIL  61

Query  64   GALSDRFGRRPVLLVSLAGAAVDYAIMATAPFLWVLYigrivagitgatgavagayiaDI  123
            G LSD++GR+P+LL SL GAA+DY +MA +  LW+LYIGRI+AGITGATGAV ++ ++D+
Sbjct  62   GRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAVCASAMSDV  121

Query  124  TDGDERARHFGFMSACFGFGMVAGPVLGGLMGGFSPHapffaaaalnglnflTGCFLLPE  183
            T + +R+R FGF+++ FG G++ GP+LGGL+G++S+H PF+ AA  +++ ++ + +++ E
Sbjct  122  TPAKNRTRYFGFLGGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFRE  181

Query  184  SHK-----GERRPLRREALNPLASFRWARGMTVVAALMAVFFIMQLVGQVPAALWVIFGE  238
            ++K     ++R P  + A N ++ F   +++      +A +FI+QL+GQ+PA++WV+F +
Sbjct  182  TQKREALVANRTPENQTASNTVTVF-FKKSLYF---WLATYFIIQLIGQIPATIWVLFTQ  237

Query  239  DRFHWDATTIGISLAAFGILHSLAQAMITGPVAARLGERRALMLGMIADGTGYILLAFAT  298
             RF+W++T+IG+SLA +G+L+ + QA+++G +A + GE+ ++M++M  D  G +LLA   
Sbjct  238  YRFDWNTTSIGMSLAVLGVLNIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIG  297

Query  299  RGWMAFPIMVLLASGGIGMPALQAMLSRQVDEERQGQLQGSLAALTSLTSIVGPLLFTAI  358
            + W+ +P ++ LA+GG+G PALQ+ LS+ VD++ QG+LQG+L +LT++T+I+GPLLF+ I
Sbjct  298  HVWVILPALICLAAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFI  357

Query  359  YAASITTWNGWAWIAGAALY  378
            Y+ S++ W+G  W+ GA LY
Sbjct  358  YSYSVAYWDGLLWLMGAILY  377

> NC_016808_R1|83|G76|378774005|YP_005176248.1|Pasteurella_multocida_36950|+|71520..72722|tet(H)|Pmu_03500|tetracycline 
efflux 
protein, class H
Length=400

 Score =  252 bits (941),  Expect = 3e-68, Method: Compositional matrix adjust.
 Identities = 177/380 (47%), Positives = 289/380 (77%), Gaps = 9/380 (2%)

Query  4    NRPLIVILSTVALDAVGIGLIMPVLPGLLRDLVHSNDVTAHYGILLALYALMQFACAPVL  63
            N+++I+IL    LDA+GIGLIMPVLP LL ++V  N +++HYG+LLALYA MQ   AP+L
Sbjct  2    NKSIIIILLITVLDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPIL  61

Query  64   GALSDRFGRRPVLLVSLAGAAVDYAIMATAPFLWVLYigrivagitgatgavagayiaDI  123
            G LSD++GR+P+LL SL GAA+DY +MA +  LW+LYIGRI+AGITGATGAV ++ ++D+
Sbjct  62   GRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAVCASAMSDV  121

Query  124  TDGDERARHFGFMSACFGFGMVAGPVLGGLMGGFSPHapffaaaalnglnflTGCFLLPE  183
            T + +R+R FGF+++ FG G++ GP+LGGL+G++S+H PF+ AA  +++ ++ + +++ E
Sbjct  122  TPAKNRTRYFGFLGGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFRE  181

Query  184  SHK-----GERRPLRREALNPLASFRWARGMTVVAALMAVFFIMQLVGQVPAALWVIFGE  238
            ++K     ++R P  + A N ++ F   +++      +A +FI+QL+GQ+PA++WV+F +
Sbjct  182  TQKREALVANRTPENQTASNTVTVF-FKKSLYF---WLATYFIIQLIGQIPATIWVLFTQ  237

Query  239  DRFHWDATTIGISLAAFGILHSLAQAMITGPVAARLGERRALMLGMIADGTGYILLAFAT  298
             RF+W++T+IG+SLA +G+L+ + QA+++G +A + GE+ ++M++M  D  G +LLA   
Sbjct  238  YRFDWNTTSIGMSLAVLGVLNIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIG  297

Query  299  RGWMAFPIMVLLASGGIGMPALQAMLSRQVDEERQGQLQGSLAALTSLTSIVGPLLFTAI  358
            + W+ +P ++ LA+GG+G PALQ+ LS+ VD++ QG+LQG+L +LT++T+I+GPLLF+ I
Sbjct  298  HVWVILPALICLAAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFI  357

Query  359  YAASITTWNGWAWIAGAALY  378
            Y+ S++ W+G  W+ GA LY
Sbjct  358  YSYSVAYWDGLLWLMGAILY  377

> NC_016808_R1|83|G76|378774005|YP_005176248.1|Pasteurella_multocida_36950|+|71520..72722|tet(H)|Pmu_03500|tetracycline 
efflux 
protein, class H
Length=400

 Score =  252 bits (941),  Expect = 3e-68, Method: Compositional matrix adjust.
 Identities = 177/380 (47%), Positives = 289/380 (77%), Gaps = 9/380 (2%)

Query  4    NRPLIVILSTVALDAVGIGLIMPVLPGLLRDLVHSNDVTAHYGILLALYALMQFACAPVL  63
            N+++I+IL    LDA+GIGLIMPVLP LL ++V  N +++HYG+LLALYA MQ   AP+L
Sbjct  2    NKSIIIILLITVLDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPIL  61

Query  64   GALSDRFGRRPVLLVSLAGAAVDYAIMATAPFLWVLYigrivagitgatgavagayiaDI  123
            G LSD++GR+P+LL SL GAA+DY +MA +  LW+LYIGRI+AGITGATGAV ++ ++D+
Sbjct  62   GRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAVCASAMSDV  121

Query  124  TDGDERARHFGFMSACFGFGMVAGPVLGGLMGGFSPHapffaaaalnglnflTGCFLLPE  183
            T + +R+R FGF+++ FG G++ GP+LGGL+G++S+H PF+ AA  +++ ++ + +++ E
Sbjct  122  TPAKNRTRYFGFLGGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFRE  181

Query  184  SHK-----GERRPLRREALNPLASFRWARGMTVVAALMAVFFIMQLVGQVPAALWVIFGE  238
            ++K     ++R P  + A N ++ F   +++      +A +FI+QL+GQ+PA++WV+F +
Sbjct  182  TQKREALVANRTPENQTASNTVTVF-FKKSLYF---WLATYFIIQLIGQIPATIWVLFTQ  237

Query  239  DRFHWDATTIGISLAAFGILHSLAQAMITGPVAARLGERRALMLGMIADGTGYILLAFAT  298
             RF+W++T+IG+SLA +G+L+ + QA+++G +A + GE+ ++M++M  D  G +LLA   
Sbjct  238  YRFDWNTTSIGMSLAVLGVLNIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIG  297

Query  299  RGWMAFPIMVLLASGGIGMPALQAMLSRQVDEERQGQLQGSLAALTSLTSIVGPLLFTAI  358
            + W+ +P ++ LA+GG+G PALQ+ LS+ VD++ QG+LQG+L +LT++T+I+GPLLF+ I
Sbjct  298  HVWVILPALICLAAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFI  357

Query  359  YAASITTWNGWAWIAGAALY  378
            Y+ S++ W+G  W+ GA LY
Sbjct  358  YSYSVAYWDGLLWLMGAILY  377

> NC_016808_R1|83|G76|378774005|YP_005176248.1|Pasteurella_multocida_36950|+|71520..72722|tet(H)|Pmu_03500|tetracycline 
efflux 
protein, class H
Length=400

 Score =  252 bits (941),  Expect = 3e-68, Method: Compositional matrix adjust.
 Identities = 177/380 (47%), Positives = 289/380 (77%), Gaps = 9/380 (2%)

Query  4    NRPLIVILSTVALDAVGIGLIMPVLPGLLRDLVHSNDVTAHYGILLALYALMQFACAPVL  63
            N+++I+IL    LDA+GIGLIMPVLP LL ++V  N +++HYG+LLALYA MQ   AP+L
Sbjct  2    NKSIIIILLITVLDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPIL  61

Query  64   GALSDRFGRRPVLLVSLAGAAVDYAIMATAPFLWVLYigrivagitgatgavagayiaDI  123
            G LSD++GR+P+LL SL GAA+DY +MA +  LW+LYIGRI+AGITGATGAV ++ ++D+
Sbjct  62   GRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAVCASAMSDV  121

Query  124  TDGDERARHFGFMSACFGFGMVAGPVLGGLMGGFSPHapffaaaalnglnflTGCFLLPE  183
            T + +R+R FGF+++ FG G++ GP+LGGL+G++S+H PF+ AA  +++ ++ + +++ E
Sbjct  122  TPAKNRTRYFGFLGGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFRE  181

Query  184  SHK-----GERRPLRREALNPLASFRWARGMTVVAALMAVFFIMQLVGQVPAALWVIFGE  238
            ++K     ++R P  + A N ++ F   +++      +A +FI+QL+GQ+PA++WV+F +
Sbjct  182  TQKREALVANRTPENQTASNTVTVF-FKKSLYF---WLATYFIIQLIGQIPATIWVLFTQ  237

Query  239  DRFHWDATTIGISLAAFGILHSLAQAMITGPVAARLGERRALMLGMIADGTGYILLAFAT  298
             RF+W++T+IG+SLA +G+L+ + QA+++G +A + GE+ ++M++M  D  G +LLA   
Sbjct  238  YRFDWNTTSIGMSLAVLGVLNIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIG  297

Query  299  RGWMAFPIMVLLASGGIGMPALQAMLSRQVDEERQGQLQGSLAALTSLTSIVGPLLFTAI  358
            + W+ +P ++ LA+GG+G PALQ+ LS+ VD++ QG+LQG+L +LT++T+I+GPLLF+ I
Sbjct  298  HVWVILPALICLAAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFI  357

Query  359  YAASITTWNGWAWIAGAALY  378
            Y+ S++ W+G  W+ GA LY
Sbjct  358  YSYSVAYWDGLLWLMGAILY  377

> NC_016808_R1|83|G76|378774005|YP_005176248.1|Pasteurella_multocida_36950|+|71520..72722|tet(H)|Pmu_03500|tetracycline 
efflux 
protein, class H
Length=400

 Score =  251 bits (937),  Expect = 6e-68, Method: Compositional matrix adjust.
 Identities = 176/380 (47%), Positives = 288/380 (76%), Gaps = 9/380 (2%)

Query  29   NRPLIVILSTVALDAVGIGLIMPVLPGLLRDLVHSNDVTAHYGILLALYALVQFACAPVL  88
            N+++I+IL    LDA+GIGLIMPVLP LL ++V  N +++HYG+LLALYA +Q   AP+L
Sbjct  2    NKSIIIILLITVLDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPIL  61

Query  89   GALSDRFGRRPILLVSLAGATVDYAIMATAPFLWVLYigrivagitgatgavagayiaDI  148
            G LSD++GR+PILL SL GA++DY +MA +  LW+LYIGRI+AGITGATGAV ++ ++D+
Sbjct  62   GRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAVCASAMSDV  121

Query  149  TDGDERARHFGFMSACFGFGMVAGPVLGGLMGGFSPHapffaaaalnglnflTGCFLLPE  208
            T + +R+R FGF+++ FG G++ GP+LGGL+G++S+H PF+ AA  +++ ++ + +++ E
Sbjct  122  TPAKNRTRYFGFLGGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFRE  181

Query  209  SHK-----GERRPLRREALNPLASFRWARGMTVVAALMAVFFIMQLVGQVPAALWVIFGE  263
            ++K     ++R P  + A N ++ F   +++      +A +FI+QL+GQ+PA++WV+F +
Sbjct  182  TQKREALVANRTPENQTASNTVTVF-FKKSLYF---WLATYFIIQLIGQIPATIWVLFTQ  237

Query  264  DRFHWDATTIGISLAAFGILHSLAQAMITGPVAARLGERRALMLGMIADGTGYILLAFAT  323
             RF+W++T+IG+SLA +G+L+ + QA+++G +A + GE+ ++M++M  D  G +LLA   
Sbjct  238  YRFDWNTTSIGMSLAVLGVLNIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIG  297

Query  324  RGWMAFPIMVLLASGGIGMPALQTMLSRQVDEERQGQLQGSLAALTSLTSIVGPLLFTAI  383
            + W+ +P ++ LA+GG+G PALQ  LS+ VD++ QG+LQG+L +LT++T+I+GPLLF+ I
Sbjct  298  HVWVILPALICLAAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFI  357

Query  384  YAASITTWNGWAWIAGAALY  403
            Y+ S++ W+G  W+ GA LY
Sbjct  358  YSYSVAYWDGLLWLMGAILY  377

> NC_016808_R1|83|G76|378774005|YP_005176248.1|Pasteurella_multocida_36950|+|71520..72722|tet(H)|Pmu_03500|tetracycline 
efflux 
protein, class H
Length=400

 Score =  240 bits (896),  Expect = 1e-64, Method: Compositional matrix adjust.
 Identities = 181/368 (50%), Positives = 284/368 (78%), Gaps = 9/368 (2%)

Query  16   LDAVGIGLVMPVLPGLLRDIVHSDSIASHYGVLLALYALMQFLCAPVLGALSDRFGRRPV  75
            LDA+GIGL+MPVLP LL ++V  +S+A+HYGVLLALYA MQ + AP+LG LSD++GR+P+
Sbjct  14   LDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPILGRLSDKYGRKPI  73

Query  76   LLASLLGATIDYAIMATTPVLWILYagrivagitgatgavagayiaDITDGEDRARHFGL  135
            LL SLLGA++DY +MA +  LW+LY GRI+AGITGATGAV ++ ++D+T + +R+R FG+
Sbjct  74   LLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAVCASAMSDVTPAKNRTRYFGF  133

Query  136  MSACFgvgmvagpvaggllgaISLHAPFlaaavlnglnlllgCFLMQESHK-----GERR  190
            +++ FGVG++ GP+ GGLLG IS H PF+ AA+ +++ L+L+ ++ +E++K     ++R 
Sbjct  134  LGGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFRETQKREALVANRT  193

Query  191  PMPLRAFNPVSSFRWARGMTIVAALMTVFFIMQLVGQVPAALWVIFGEDRFRWSATMIGL  250
            P    A N V+ F   +++ +    ++ +FI+QL+GQ+PA++WV+F + RF W++T IG+
Sbjct  194  PENQTASNTVTVF-FKKSLYF---WLATYFIIQLIGQIPATIWVLFTQYRFDWNTTSIGM  249

Query  251  SLAVFGILHALAQAFVTGPATKRFGEKQAIIAGMAADALGYVLLAFATRGWMAFPIMILL  310
            SLAV+G+L+ + QA+V+G  +++ GEK +I+ +M+ D +G +LLA   + W+ +P +I L
Sbjct  250  SLAVLGVLNIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHVWVILPALICL  309

Query  311  ASGGIGMPALQAMLSRQVDDDHQGQLQGSLAALTSLTSIIGPLIFTAIYAASASTWNGLA  370
            A+GG+G PALQ+ LS+ VDD+ QG+LQG+L +LT++T+IIGPL+F+ IY+ S + W+GL 
Sbjct  310  AAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYSYSVAYWDGLL  369

Query  371  WIVGAALY  378
            W++GA LY
Sbjct  370  WLMGAILY  377

> NC_016808_R1|83|G76|378774005|YP_005176248.1|Pasteurella_multocida_36950|+|71520..72722|tet(H)|Pmu_03500|tetracycline 
efflux 
protein, class H
Length=400

 Score =  240 bits (896),  Expect = 1e-64, Method: Compositional matrix adjust.
 Identities = 181/368 (50%), Positives = 284/368 (78%), Gaps = 9/368 (2%)

Query  16   LDAVGIGLVMPVLPGLLRDIVHSDSIASHYGVLLALYALMQFLCAPVLGALSDRFGRRPV  75
            LDA+GIGL+MPVLP LL ++V  +S+A+HYGVLLALYA MQ + AP+LG LSD++GR+P+
Sbjct  14   LDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPILGRLSDKYGRKPI  73

Query  76   LLASLLGATIDYAIMATTPVLWILYagrivagitgatgavagayiaDITDGEDRARHFGL  135
            LL SLLGA++DY +MA +  LW+LY GRI+AGITGATGAV ++ ++D+T + +R+R FG+
Sbjct  74   LLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAVCASAMSDVTPAKNRTRYFGF  133

Query  136  MSACFgvgmvagpvaggllgaISLHAPFlaaavlnglnlllgCFLMQESHK-----GERR  190
            +++ FGVG++ GP+ GGLLG IS H PF+ AA+ +++ L+L+ ++ +E++K     ++R 
Sbjct  134  LGGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFRETQKREALVANRT  193

Query  191  PMPLRAFNPVSSFRWARGMTIVAALMTVFFIMQLVGQVPAALWVIFGEDRFRWSATMIGL  250
            P    A N V+ F   +++ +    ++ +FI+QL+GQ+PA++WV+F + RF W++T IG+
Sbjct  194  PENQTASNTVTVF-FKKSLYF---WLATYFIIQLIGQIPATIWVLFTQYRFDWNTTSIGM  249

Query  251  SLAVFGILHALAQAFVTGPATKRFGEKQAIIAGMAADALGYVLLAFATRGWMAFPIMILL  310
            SLAV+G+L+ + QA+V+G  +++ GEK +I+ +M+ D +G +LLA   + W+ +P +I L
Sbjct  250  SLAVLGVLNIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHVWVILPALICL  309

Query  311  ASGGIGMPALQAMLSRQVDDDHQGQLQGSLAALTSLTSIIGPLIFTAIYAASASTWNGLA  370
            A+GG+G PALQ+ LS+ VDD+ QG+LQG+L +LT++T+IIGPL+F+ IY+ S + W+GL 
Sbjct  310  AAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYSYSVAYWDGLL  369

Query  371  WIVGAALY  378
            W++GA LY
Sbjct  370  WLMGAILY  377

> NC_016808_R1|83|G76|378774005|YP_005176248.1|Pasteurella_multocida_36950|+|71520..72722|tet(H)|Pmu_03500|tetracycline 
efflux 
protein, class H
Length=400

 Score =  239 bits (891),  Expect = 3e-64, Method: Compositional matrix adjust.
 Identities = 180/368 (49%), Positives = 284/368 (78%), Gaps = 9/368 (2%)

Query  16   LDAVGIGLVMPVLPGLLRDIVHSDSIASHYGVLLALYALMQFLCAPVLGALSDRFGRRPV  75
            LDA+GIGL+MPVLP LL ++V  +S+A+HYGVLLALYA MQ + AP+LG LSD++GR+P+
Sbjct  14   LDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPILGRLSDKYGRKPI  73

Query  76   LLASLLGATIDYAIMATTPVLWILYagrivagitgatgavagayiaDITDGEDRARHFGL  135
            LL SLLGA++DY +MA +  LW+LY GRI+AGITGATGAV ++ ++D+T + +R+R FG+
Sbjct  74   LLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAVCASAMSDVTPAKNRTRYFGF  133

Query  136  MSACFgvgmvagpvaggllgaISLHAPFlaaavlnglnlllgCFLMQESHK-----GERR  190
            +++ FGVG++ GP+ GGLLG IS H PF+ AA+ +++ L+L+ ++ +E++K     ++R 
Sbjct  134  LGGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFRETQKREALVANRT  193

Query  191  PMPLRAFNPVSSFRWARGMTIVAALMTVFFIMQLVGQVPAALWVIFGEDRFRWSATMIGL  250
            P    A N V+ F   +++ +    ++ +FI+QL+GQ+PA++WV+F + RF W++T IG+
Sbjct  194  PENQTASNTVTVF-FKKSLYF---WLATYFIIQLIGQIPATIWVLFTQYRFDWNTTSIGM  249

Query  251  SLAVFGILHALAQAFVTGPATKRFGEKQAIIAGMAADALGYVLLAFATRGWMAFPIMILL  310
            SLAV+G+L+ + QA+V+G  +++ GEK +I+ +M+ D +G +LLA   + W+ +P +I L
Sbjct  250  SLAVLGVLNIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHVWVILPALICL  309

Query  311  ASSGIGMPALQAMLSRQVDDEHQGQLQGSLAALTSLTSIIGPLIFTAIYAASASTWNGLA  370
            A++G+G PALQ+ LS+ VDD+ QG+LQG+L +LT++T+IIGPL+F+ IY+ S + W+GL 
Sbjct  310  AAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYSYSVAYWDGLL  369

Query  371  WIVGAALY  378
            W++GA LY
Sbjct  370  WLMGAILY  377

> NC_016808_R1|83|G76|378774005|YP_005176248.1|Pasteurella_multocida_36950|+|71520..72722|tet(H)|Pmu_03500|tetracycline 
efflux 
protein, class H
Length=400

 Score =  239 bits (891),  Expect = 3e-64, Method: Compositional matrix adjust.
 Identities = 180/368 (49%), Positives = 284/368 (78%), Gaps = 9/368 (2%)

Query  16   LDAVGIGLVMPVLPGLLRDIVHSDSIASHYGVLLALYALMQFLCAPVLGALSDRFGRRPV  75
            LDA+GIGL+MPVLP LL ++V  +S+A+HYGVLLALYA MQ + AP+LG LSD++GR+P+
Sbjct  14   LDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPILGRLSDKYGRKPI  73

Query  76   LLASLLGATIDYAIMATTPVLWILYagrivagitgatgavagayiaDITDGEDRARHFGL  135
            LL SLLGA++DY +MA +  LW+LY GRI+AGITGATGAV ++ ++D+T + +R+R FG+
Sbjct  74   LLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAVCASAMSDVTPAKNRTRYFGF  133

Query  136  MSACFgvgmvagpvaggllgaISLHAPFlaaavlnglnlllgCFLMQESHK-----GERR  190
            +++ FGVG++ GP+ GGLLG IS H PF+ AA+ +++ L+L+ ++ +E++K     ++R 
Sbjct  134  LGGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFRETQKREALVANRT  193

Query  191  PMPLRAFNPVSSFRWARGMTIVAALMTVFFIMQLVGQVPAALWVIFGEDRFRWSATMIGL  250
            P    A N V+ F   +++ +    ++ +FI+QL+GQ+PA++WV+F + RF W++T IG+
Sbjct  194  PENQTASNTVTVF-FKKSLYF---WLATYFIIQLIGQIPATIWVLFTQYRFDWNTTSIGM  249

Query  251  SLAVFGILHALAQAFVTGPATKRFGEKQAIIAGMAADALGYVLLAFATRGWMAFPIMILL  310
            SLAV+G+L+ + QA+V+G  +++ GEK +I+ +M+ D +G +LLA   + W+ +P +I L
Sbjct  250  SLAVLGVLNIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHVWVILPALICL  309

Query  311  ASSGIGMPALQAMLSRQVDDEHQGQLQGSLAALTSLTSIIGPLIFTAIYAASASTWNGLA  370
            A++G+G PALQ+ LS+ VDD+ QG+LQG+L +LT++T+IIGPL+F+ IY+ S + W+GL 
Sbjct  310  AAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYSYSVAYWDGLL  369

Query  371  WIVGAALY  378
            W++GA LY
Sbjct  370  WLMGAILY  377

> NC_016808_R1|83|G76|378774005|YP_005176248.1|Pasteurella_multocida_36950|+|71520..72722|tet(H)|Pmu_03500|tetracycline 
efflux 
protein, class H
Length=400

 Score =  239 bits (891),  Expect = 3e-64, Method: Compositional matrix adjust.
 Identities = 180/368 (49%), Positives = 284/368 (78%), Gaps = 9/368 (2%)

Query  16   LDAVGIGLVMPVLPGLLRDIVHSDSIASHYGVLLALYALMQFLCAPVLGALSDRFGRRPV  75
            LDA+GIGL+MPVLP LL ++V  +S+A+HYGVLLALYA MQ + AP+LG LSD++GR+P+
Sbjct  14   LDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPILGRLSDKYGRKPI  73

Query  76   LLASLLGATIDYAIMATTPVLWILYagrivagitgatgavagayiaDITDGEDRARHFGL  135
            LL SLLGA++DY +MA +  LW+LY GRI+AGITGATGAV ++ ++D+T + +R+R FG+
Sbjct  74   LLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAVCASAMSDVTPAKNRTRYFGF  133

Query  136  MSACFgvgmvagpvaggllgaISLHAPFlaaavlnglnlllgCFLMQESHK-----GERR  190
            +++ FGVG++ GP+ GGLLG IS H PF+ AA+ +++ L+L+ ++ +E++K     ++R 
Sbjct  134  LGGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFRETQKREALVANRT  193

Query  191  PMPLRAFNPVSSFRWARGMTIVAALMTVFFIMQLVGQVPAALWVIFGEDRFRWSATMIGL  250
            P    A N V+ F   +++ +    ++ +FI+QL+GQ+PA++WV+F + RF W++T IG+
Sbjct  194  PENQTASNTVTVF-FKKSLYF---WLATYFIIQLIGQIPATIWVLFTQYRFDWNTTSIGM  249

Query  251  SLAVFGILHALAQAFVTGPATKRFGEKQAIIAGMAADALGYVLLAFATRGWMAFPIMILL  310
            SLAV+G+L+ + QA+V+G  +++ GEK +I+ +M+ D +G +LLA   + W+ +P +I L
Sbjct  250  SLAVLGVLNIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHVWVILPALICL  309

Query  311  ASSGIGMPALQAMLSRQVDDEHQGQLQGSLAALTSLTSIIGPLIFTAIYAASASTWNGLA  370
            A++G+G PALQ+ LS+ VDD+ QG+LQG+L +LT++T+IIGPL+F+ IY+ S + W+GL 
Sbjct  310  AAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYSYSVAYWDGLL  369

Query  371  WIVGAALY  378
            W++GA LY
Sbjct  370  WLMGAILY  377

> NC_016808_R1|83|G76|378774005|YP_005176248.1|Pasteurella_multocida_36950|+|71520..72722|tet(H)|Pmu_03500|tetracycline 
efflux 
protein, class H
Length=400

 Score =  239 bits (891),  Expect = 3e-64, Method: Compositional matrix adjust.
 Identities = 180/368 (49%), Positives = 284/368 (78%), Gaps = 9/368 (2%)

Query  16   LDAVGIGLVMPVLPGLLRDIVHSDSIASHYGVLLALYALMQFLCAPVLGALSDRFGRRPV  75
            LDA+GIGL+MPVLP LL ++V  +S+A+HYGVLLALYA MQ + AP+LG LSD++GR+P+
Sbjct  14   LDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPILGRLSDKYGRKPI  73

Query  76   LLASLLGATIDYAIMATTPVLWILYagrivagitgatgavagayiaDITDGEDRARHFGL  135
            LL SLLGA++DY +MA +  LW+LY GRI+AGITGATGAV ++ ++D+T + +R+R FG+
Sbjct  74   LLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAVCASAMSDVTPAKNRTRYFGF  133

Query  136  MSACFgvgmvagpvaggllgaISLHAPFlaaavlnglnlllgCFLMQESHK-----GERR  190
            +++ FGVG++ GP+ GGLLG IS H PF+ AA+ +++ L+L+ ++ +E++K     ++R 
Sbjct  134  LGGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFRETQKREALVANRT  193

Query  191  PMPLRAFNPVSSFRWARGMTIVAALMTVFFIMQLVGQVPAALWVIFGEDRFRWSATMIGL  250
            P    A N V+ F   +++ +    ++ +FI+QL+GQ+PA++WV+F + RF W++T IG+
Sbjct  194  PENQTASNTVTVF-FKKSLYF---WLATYFIIQLIGQIPATIWVLFTQYRFDWNTTSIGM  249

Query  251  SLAVFGILHALAQAFVTGPATKRFGEKQAIIAGMAADALGYVLLAFATRGWMAFPIMILL  310
            SLAV+G+L+ + QA+V+G  +++ GEK +I+ +M+ D +G +LLA   + W+ +P +I L
Sbjct  250  SLAVLGVLNIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHVWVILPALICL  309

Query  311  ASSGIGMPALQAMLSRQVDDEHQGQLQGSLAALTSLTSIIGPLIFTAIYAASASTWNGLA  370
            A++G+G PALQ+ LS+ VDD+ QG+LQG+L +LT++T+IIGPL+F+ IY+ S + W+GL 
Sbjct  310  AAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYSYSVAYWDGLL  369

Query  371  WIVGAALY  378
            W++GA LY
Sbjct  370  WLMGAILY  377

> NC_016808_R1|83|G76|378774005|YP_005176248.1|Pasteurella_multocida_36950|+|71520..72722|tet(H)|Pmu_03500|tetracycline 
efflux 
protein, class H
Length=400

 Score =  238 bits (889),  Expect = 3e-64, Method: Compositional matrix adjust.
 Identities = 165/359 (46%), Positives = 272/359 (76%), Gaps = 9/359 (2%)

Query  1    MPVLPGLLRDLVHSNDVTAHYGILLALYALMQFACAPVLGALSDRFGRRPVLLVSLAGAA  60
            MPVLP LL ++V  N +++HYG+LLALYA MQ   AP+LG LSD++GR+P+LL SL GAA
Sbjct  23   MPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPILGRLSDKYGRKPILLFSLLGAA  82

Query  61   VDYAIMATAPFLWVLYigrivagitgatgavagayiaDITDGDERARHFGFMSACFGFGM  120
            +DY +MA +  LW+LYIGRI+AGITGATGAV ++ ++D+T + +R+R FGF+++ FG G+
Sbjct  83   LDYLLMAFSTTLWMLYIGRIIAGITGATGAVCASAMSDVTPAKNRTRYFGFLGGAFGVGL  142

Query  121  VAGPVLGGLMGGFSPHapffaaaalnglnflTGCFLLPESHK-----GERRPLRREALNP  175
            + GP+LGGL+G++S+H PF+ AA  +++ ++ + +++ E++K     ++R P  + A N 
Sbjct  143  IIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFRETQKREALVANRTPENQTASNT  202

Query  176  LASFRWARGMTVVAALMAVFFIMQLVGQVPAALWVIFGEDRFHWDATTIGISLAAFGILH  235
            ++ F   +++      +A +FI+QL+GQ+PA++WV+F + RF+W++T+IG+SLA +G+L+
Sbjct  203  VTVF-FKKSLYF---WLATYFIIQLIGQIPATIWVLFTQYRFDWNTTSIGMSLAVLGVLN  258

Query  236  SLAQAMITGPVAARLGERRALMLGMIADGTGYILLAFATRGWMAFPIMVLLASGGIGMPA  295
             + QA+++G +A + GE+ ++M++M  D  G +LLA   + W+ +P ++ LA+GG+G PA
Sbjct  259  IFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHVWVILPALICLAAGGMGQPA  318

Query  296  LQAMLSRQVDEERQGQLQGSLAALTSLTSIVGPLLFTAIYAASITTWNGWAWIAGAALY  354
            LQ+ LS+ VD++ QG+LQG+L +LT++T+I+GPLLF+ IY+ S++ W+G  W+ GA LY
Sbjct  319  LQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYSYSVAYWDGLLWLMGAILY  377

> NC_016808_R1|83|G76|378774005|YP_005176248.1|Pasteurella_multocida_36950|+|71520..72722|tet(H)|Pmu_03500|tetracycline 
efflux 
protein, class H
Length=400

 Score =  211 bits (786),  Expect = 6e-56, Method: Compositional matrix adjust.
 Identities = 162/369 (44%), Positives = 277/369 (76%), Gaps = 9/369 (2%)

Query  39   ALDAVGIGLVMPVLPGLLRGLVHSEEIaghygallaayalMQFLCAPALGALSDRYGRRP  98
             LDA+GIGL+MPVLP LL  +V  + +A HYG LLA YA MQ + AP LG LSD+YGR+P
Sbjct  13   VLDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPILGRLSDKYGRKP  72

Query  99   ILLLSLAGAAIDYLIMATAPTLLVLYLGRLvagitgatgavagaciaDLTKEGERARYFG  158
            ILL+SL GAA+DYL+MA + TL +LY+GR++AGITGATGAV ++ ++D+T   +R+RYFG
Sbjct  73   ILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAVCASAMSDVTPAKNRTRYFG  132

Query  159  LMSACFGVGMIAGPVIGGLLGGISPQLPFLAAAILNGLNFLMGCFLLPESHR-----GER  213
            ++++ FGVG+I GP++GGLLG+IS+++PF+ AAI +++ ++++ +++ E+++     ++R
Sbjct  133  FLGGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFRETQKREALVANR  192

Query  214  RPLSLKALMPASSFLWARGKTAVIALMAVFFVMQFVGQVPATLWVIYGEDRYQWDAATVG  273
             P +  A    + F+    K ++   +A +F++Q++GQ+PAT+WV++ + R++W+++++G
Sbjct  193  TPENQTASNTVTVFF----KKSLYFWLATYFIIQLIGQIPATIWVLFTQYRFDWNTTSIG  248

Query  274  LSLAAFGALHALVQALATGPATARLGEKRTLLLGMAADALGYVLLAFATRGWMAFPIMVL  333
            +SLA +G L+ + QA+ +G  + + GEK T++++M+ D +G +LLA   + W+ +P ++ 
Sbjct  249  MSLAVLGVLNIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHVWVILPALIC  308

Query  334  LASGGIGMPALQAMLSARVEQERqgqlqgalaalsslsaIVGPLAITALYAATLNVWKGW  393
            LA+GG+G PALQ+ LS  V+++ QG+LQG+L +L+++++I+GPL ++ +Y+ ++  W G 
Sbjct  309  LAAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYSYSVAYWDGL  368

Query  394  AWIAGAGLY  402
             W+ GA LY
Sbjct  369  LWLMGAILY  377

> NC_016808_R1|83|G76|378774005|YP_005176248.1|Pasteurella_multocida_36950|+|71520..72722|tet(H)|Pmu_03500|tetracycline 
efflux 
protein, class H
Length=400

 Score =  204 bits (757),  Expect = 1e-53, Method: Compositional matrix adjust.
 Identities = 194/399 (49%), Positives = 294/399 (74%), Gaps = 6/399 (1%)

Query  1    MNRTVMMALVIIFLDAigigiiMPVLPALLREFVGKANVAENYGVLLALYAMMQVIFAPL  60
            MN+++++ L+I  LDAIGIG+IMPVLP+LL EFV+  ++A +YGVLLALYA MQVIFAP+
Sbjct  1    MNKSIIIILLITVLDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPI  60

Query  61   LGRWSDRIGRRPVLLLSLLGATLDYALMATASVVWVLYLGRLiagitgatgavaastiaD  120
            LGR SD+ GR+P+LL+SLLGA+LDY LMA ++ +W+LY+GR+IAGITGATGAV AS+++D
Sbjct  61   LGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAVCASAMSD  120

Query  121  VTPEESRTHWfgmmgacfgggmiagpviggFAGQLSVQAPFMFAAAINGLAFLVSLFILH  180
            VTP  +RT+ FG +G+ FG G+I GP++GG+ G++S + PF+FAA  +++ +++SL++++
Sbjct  121  VTPAKNRTRYFGFLGGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFR  180

Query  181  ETHNANQVSDEIKNETINETTSSIREMISPLSGLLVVFFIIQLIGQIPATLWVLFGEERF  240
            ET++ + +  +   E    + +       +L   L  +FIIQLIGQIPAT+WVLF + RF
Sbjct  181  ETQKREALVANRTPENQTASNTVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYRF  240

Query  241  AWDGVMVGVSLAVFGLTHALFQGLAAGFIAKHLGEQRAIVVGILAD--GCGLLLLAVITQ  298
             W+   +G+SLAV+G+ + +FQ++ AG +A+  GE+ +I++++  D  GC  LLLA I +
Sbjct  241  DWNTTSIGMSLAVLGVLNIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGC--LLLAWIGH  298

Query  299  SWMVWPVVLLLACGGITLPALQGIISvrvgqvaqgqlqglltslthltgVIGPLIFAFLY  358
             W++ P ++ LA GG+  PALQG +S  V++ AQG+LQG L SLT++TG+IGPL+FAF+Y
Sbjct  299  VWVILPALICLAAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIY  358

Query  359  SATHESWNGWVWIVGCGLYVVALTILRFFYPGRAVHPKN  397
            S +   W+G +W++G  LY + L     ++  R   PK 
Sbjct  359  SYSVAYWDGLLWLMGAILYAMLLITA--YFHQRKTTPKA  395

> NC_016808_R1|83|G76|378774005|YP_005176248.1|Pasteurella_multocida_36950|+|71520..72722|tet(H)|Pmu_03500|tetracycline 
efflux 
protein, class H
Length=400

 Score =  201 bits (748),  Expect = 5e-53, Method: Compositional matrix adjust.
 Identities = 167/395 (43%), Positives = 268/395 (68%), Gaps = 9/395 (2%)

Query  1    MKRTLMIVLAVTALDAVGIGLVMPVLPSLLRDVAHSDDVAGHYGVLLSLYALMQVFFAPI  60
            M+++++I+L +T LDA+GIGL+MPVLP+LL +    + +A HYGVLL+LYA MQV+FAPI
Sbjct  1    MNKSIIIILLITVLDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPI  60

Query  61   LGGMSDRFGRKPILLGSLIGAMIDYAIMSAAPHLWVLYAGRILSgmmgatmavagaCIAD  120
            LG +SD++GRKPILL SL+GA +DY +M+ +  LW+LY GRI++G+ GAT AV ++ ++D
Sbjct  61   LGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAVCASAMSD  120

Query  121  TVEEGTRARAFGWLGACYgggmilgpvvggALGSISLTAPFaaaaaVNGLMALSVYLVMP  180
                  R+R FG LG+ +G G+I+GP++GG LG IS   PF  AA  ++++ +   L   
Sbjct  121  VTPAKNRTRYFGFLGGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFR  180

Query  181  EVRR----TTKPEPQAKGLHCALVPSGVQKGLKPLLWV--FFLLQLVGQIPAALWVIFTE  234
            E ++     ++  P+ +      V    +K+L   +W+  +F++QL+GQIPA++WV+FT+
Sbjct  181  ETQKREALVANRTPENQT-ASNTVTVFFKKSL--YFWLATYFIIQLIGQIPATIWVLFTQ  237

Query  235  DRFHWDTTYVGLSLAAFGLLHAMFQWLGTGRLVatigagytiiigiaadgLGMASLAIAT  294
             RF+W+TT +G+SLA +G+L+  FQ + +G+L    G   TI+I+++ D +G   LA   
Sbjct  238  YRFDWNTTSIGMSLAVLGVLNIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIG  297

Query  295  EGWMTVPILVLLAFGGIAMPALQSVLSDKTSQDEQGALQGMLASLTNISAVAGPVIFTAF  354
            + W+ +P L+ LA GG++ PALQ+ LS    ++ QG LQG L SLTNI+++ GP++F+ +
Sbjct  298  HVWVILPALICLAAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFI  357

Query  355  YMRTAASWNGWVWLFGpaiylaaaplliFVRRQSA  389
            Y  + A W+G +WL G+ +Y        F +R+++
Sbjct  358  YSYSVAYWDGLLWLMGAILYAMLLITAYFHQRKTT  392

> NC_016808_R1|83|G76|378774005|YP_005176248.1|Pasteurella_multocida_36950|+|71520..72722|tet(H)|Pmu_03500|tetracycline 
efflux 
protein, class H
Length=400

 Score =  201 bits (746),  Expect = 7e-53, Method: Compositional matrix adjust.
 Identities = 199/374 (54%), Positives = 277/374 (75%), Gaps = 3/374 (0%)

Query  1    MNKPAVIALVITLLDAMGIGLIMPVLPSLLREYLPEADVANHYGILLALYAVMQVCFAPL  60
            MNK+ +I L+IT+LDA+GIGLIMPVLP+LL E+++E  +A HYG+LLALYA MQV FAP+
Sbjct  1    MNKSIIIILLITVLDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPI  60

Query  61   LGRWSDKLGRRPVLLLSLAGAAFDYTLLALSNVLWMLYLGRiisgitgatgavaasvvad  120
            LGR SDK GR+P+LL+SL GAA+DY L+A+S  LWMLY+GRII+GITGATGAV AS ++D
Sbjct  61   LGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAVCASAMSD  120

Query  121  stavsERTAWFgrlgaafgagliagpaigglagdiSPHLPFVIAAILNACTFLMVFFIFK  180
             T+  +RT  FG LG+AFG GLI GP +GGL GDIS+H+PF++AAI ++  +++ +++F+
Sbjct  121  VTPAKNRTRYFGFLGGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFR  180

Query  181  PAVQTEEKPAEQKQESAGISfitllkplall---lfvffTAQLIGQIPATVWVLFTESRF  237
             + + E   A++  E+   S    +     L   L  +F  QLIGQIPAT+WVLFT+ RF
Sbjct  181  ETQKREALVANRTPENQTASNTVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYRF  240

Query  238  AWDSAAVGFSLAGLGAMHALFQAVVAGALAKRLSEKTIIFAGFIADATAFLLMSAITSGW  297
             W+++++G SLA LG ++ +FQA+VAG LA++ +EKT I  +   D  + LL++ I   W
Sbjct  241  DWNTTSIGMSLAVLGVLNIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHVW  300

Query  298  MVYPVlillagggialpalqgiiSAGASAANQGKLQGVLVSLTNLTGVAGPLLFAFIFSQ  357
            ++ P LI LA+GG++ PALQG +S +     QGKLQG LVSLTN+TG+ GPLLFAFI+S 
Sbjct  301  VILPALICLAAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYSY  360

Query  358  TQQSADGTVWLIGT  371
            +    DG +WL+G+
Sbjct  361  SVAYWDGLLWLMGA  374

> NC_016808_R1|83|G76|378774005|YP_005176248.1|Pasteurella_multocida_36950|+|71520..72722|tet(H)|Pmu_03500|tetracycline 
efflux 
protein, class H
Length=400

 Score =  177 bits (655),  Expect = 1e-45, Method: Compositional matrix adjust.
 Identities = 157/366 (43%), Positives = 246/366 (68%), Gaps = 2/366 (0%)

Query  1    MNPSLIAILATVLLDAIGVGIVMPILPGLLRTLAGAGSTDTHYGILLALYAFAQFLCAPL  60
            MN S+I IL   +LDAIG+G++MP+LP LL  + +  S  THYG+LLALYA  Q + AP+
Sbjct  1    MNKSIIIILLITVLDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPI  60

Query  61   LGTLSDRFGRRPVLLASLAGAALDYLLMALAPTLAW-LYVGRLIAGItganvavatayvt  119
            LG LSD++GR+P+LL SL GAALDYLLMA++ TL W LY+GR+IAGITGA  AV ++ ++
Sbjct  61   LGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTL-WMLYIGRIIAGITGATGAVCASAMS  119

Query  120  dvtaEPDRARRFGQLGAMMGVGFIAGPLIGGLFGALHLRAPFVaaallnalnlalVWRAL  179
            DVT+  +R+R FG LG+  GVG+I GP++GGL+G +  + PF+ AA+ +++ L L    +
Sbjct  120  DVTPAKNRTRYFGFLGGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFF  179

Query  180  PESRPRAARESRGLATLNPFAGLRRLSGAPALVPLIGIYVIVALVSQAPATLWILYGQEH  239
             E++ R A  +   +  +  +    +    +L   ++ Y I+ L++Q PAT+W+L+ Q +
Sbjct  180  RETQKREALVANRTPENQTASNTVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYR  239

Query  240  FGWSTPVAGLSLAGYGACHALAQAFAIGPliarlgerralalglagdalglVVIAFATAA  299
            F+W+T   G+SLA  G  + + QA+  G L  + GE+ ++ ++++ D +G +++A     
Sbjct  240  FDWNTTSIGMSLAVLGVLNIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHV  299

Query  300  WVPFALLPLFAAGGMTLPALQAMLARQVDDARQGELQGTLASVTSLIGVAGPLVVTTTYA  359
            WV ++ L  +AAGGM  PALQ+ L++ VDD  QG LQGTL S+T++ G+ GPL+ +  Y+
Sbjct  300  WVILPALICLAAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYS  359

Query  360  ATRGTW  365
             + + W
Sbjct  360  YSVAYW  365

> NC_016808_R1|83|G76|378774005|YP_005176248.1|Pasteurella_multocida_36950|+|71520..72722|tet(H)|Pmu_03500|tetracycline 
efflux 
protein, class H
Length=400

 Score =  169 bits (625),  Expect = 3e-43, Method: Compositional matrix adjust.
 Identities = 153/354 (44%), Positives = 241/354 (69%), Gaps = 2/354 (0%)

Query  3    LNPSLIAILATVLLDAIGVGIVMPILPGLLRSLAAAGSTDTHYGILLALYAFAQFLCAPL  62
            +N S+I IL   +LDAIG+G++MP+LP LL  + +  S  THYG+LLALYA  Q + AP+
Sbjct  1    MNKSIIIILLITVLDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPI  60

Query  63   LGALSDRFGRRPVLLASLAGAALDYLLMALAPTLAW-LYVGRLIAGItganvavatayvt  121
            LG LSD++GR+P+LL SL GAALDYLLMA++ TL W LY+GR+IAGITGA  AV ++ ++
Sbjct  61   LGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTL-WMLYIGRIIAGITGATGAVCASAMS  119

Query  122  dvtaEPDRARRFGQLGAMMGIGFIAGPLIGGLLGVLHLRAPFVaaallnalnlllVWRVL  181
            DVT+  +R+R FG LG+  G+G+I GP++GGLLG +  + PF+ AA+ +++ L+L    +
Sbjct  120  DVTPAKNRTRYFGFLGGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFF  179

Query  182  PESRPRSAREGQAVGALNPFASLRRLSGAPALAPLVGIYVIVALVSQAPATLWILYGQEH  241
             E++ R A  ++     +  ++   +    +L   ++ Y I+ L++Q PAT+W+L+ Q +
Sbjct  180  RETQKREALVANRTPENQTASNTVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYR  239

Query  242  FGWSTPVAGLSLAGYGACHALAQAFAIGPliarlgerralalglagdalglaiiaFATAA  301
            F+W+T   G+SLA  G  + + QA+  G L  + GE+ ++ ++++ D +G  ++A     
Sbjct  240  FDWNTTSIGMSLAVLGVLNIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHV  299

Query  302  WVPFALLPLFAAGGMTLPALQAMLARQVDDARQGELQGTLASVASLIGVAGPLV  355
            WV ++ L  +AAGGM  PALQ+ L++ VDD  QG LQGTL S++++ G+ GPL+
Sbjct  300  WVILPALICLAAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLL  353

> NC_016808_R1|83|G76|378774005|YP_005176248.1|Pasteurella_multocida_36950|+|71520..72722|tet(H)|Pmu_03500|tetracycline 
efflux 
protein, class H
Length=400

 Score =  168 bits (620),  Expect = 8e-43, Method: Compositional matrix adjust.
 Identities = 156/366 (43%), Positives = 246/366 (68%), Gaps = 2/366 (0%)

Query  1    MNPSLIAILATVLLDAIGVGIVMPILPgllralagagSTDTHYGILLALYAFAQFLCAPL  60
            MN S+I IL   +LDAIG+G++MP+LP LL  + +  S  THYG+LLALYA  Q + AP+
Sbjct  1    MNKSIIIILLITVLDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPI  60

Query  61   LGTLSDRFGRRPVLLASLAGAALDYLLMALAPTLAW-LYVGRLIAGItganvavatayvt  119
            LG LSD++GR+P+LL SL GAALDYLLMA++ TL W LY+GR+IAGITGA  AV ++ ++
Sbjct  61   LGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTL-WMLYIGRIIAGITGATGAVCASAMS  119

Query  120  dvtaEPDRARRFGQLGAMMGVGFIAGPLIGGLFGALHLRAPFVaaallnalnlalVWRAL  179
            DVT+  +R+R FG LG+  GVG+I GP++GGL+G +  + PF+ AA+ +++ L L    +
Sbjct  120  DVTPAKNRTRYFGFLGGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFF  179

Query  180  PESRPRAARESRGLATLNPFAGMRRLSGAPALGPLIGIYVIVALVSQAPATLWILYGQEH  239
             E++ R A  +   +  +  +    +    +L   ++ Y I+ L++Q PAT+W+L+ Q +
Sbjct  180  RETQKREALVANRTPENQTASNTVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYR  239

Query  240  FGWSTPVAGLSLAGYGACHALAQAFAIGPliarlgerralalglagdalglVVIAFATAA  299
            F+W+T   G+SLA  G  + + QA+  G L  + GE+ ++ ++++ D +G +++A     
Sbjct  240  FDWNTTSIGMSLAVLGVLNIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHV  299

Query  300  WVPFALLPLFAAGGMTLPALQAMLARQVDDARQGELQGTLASVASLIGVAGPLVVTTTYA  359
            WV ++ L  +AAGGM  PALQ+ L++ VDD  QG LQGTL S++++ G+ GPL+ +  Y+
Sbjct  300  WVILPALICLAAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYS  359

Query  360  ATRGTW  365
             + + W
Sbjct  360  YSVAYW  365

> NC_016808_R1|83|G76|378774005|YP_005176248.1|Pasteurella_multocida_36950|+|71520..72722|tet(H)|Pmu_03500|tetracycline 
efflux 
protein, class H
Length=400

 Score =  164 bits (607),  Expect = 7e-42, Method: Compositional matrix adjust.
 Identities = 153/354 (44%), Positives = 242/354 (69%), Gaps = 2/354 (0%)

Query  3    LNPSLIAILATVLLDAIGVGIVMPILPGLLRSLAAAGSTDTHYGILLALYAFAQFLCAPL  62
            +N S+I IL   +LDAIG+G++MP+LP LL  + +  S  THYG+LLALYA  Q + AP+
Sbjct  1    MNKSIIIILLITVLDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPI  60

Query  63   LGALSDRFGRRPVLLASLAGAALDYLLMALAPTLAW-LYVGRLIagitganaavatayvt  121
            LG LSD++GR+P+LL SL GAALDYLLMA++ TL W LY+GR+IAGITGA +AV ++ ++
Sbjct  61   LGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTL-WMLYIGRIIAGITGATGAVCASAMS  119

Query  122  dvtaEPDRARRFGQLGAMMGIGFIAGPLIGGLLGVLHLRAPFVaaallnalnlllVWRVL  181
            DVT+  +R+R FG LG+  G+G+I GP++GGLLG +  + PF+ AA+ +++ L+L    +
Sbjct  120  DVTPAKNRTRYFGFLGGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFF  179

Query  182  PESRPRSAREGQAVGALNPFASLRRLSGAPALAPLVGIYVIVALVSQAPATLWILYGQEH  241
             E++ R A  ++     +  ++   +    +L   ++ Y I+ L++Q PAT+W+L+ Q +
Sbjct  180  RETQKREALVANRTPENQTASNTVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYR  239

Query  242  FGWSTPVAGLSLAGYGACHALAQAFAIGPliarlgerralalglagdalglaiiaFATAA  301
            F+W+T   G+SLA  G  + + QA+  G L  + GE+ ++ ++++ D +G  ++A     
Sbjct  240  FDWNTTSIGMSLAVLGVLNIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHV  299

Query  302  WVPFALLPLFAAGGMTLPALQAMLARQVDDARQGELQGTLASVASLIGVAGPLV  355
            WV ++ L  +AAGGM  PALQ+ L++ VDD  QG LQGTL S++++ G+ GPL+
Sbjct  300  WVILPALICLAAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLL  353

> NC_016808_R1|83|G76|378774005|YP_005176248.1|Pasteurella_multocida_36950|+|71520..72722|tet(H)|Pmu_03500|tetracycline 
efflux 
protein, class H
Length=400

 Score =  164 bits (607),  Expect = 7e-42, Method: Compositional matrix adjust.
 Identities = 153/354 (44%), Positives = 242/354 (69%), Gaps = 2/354 (0%)

Query  3    LNPSLIAILATVLLDAIGVGIVMPILPGLLRSLAAAGSTDTHYGILLALYAFAQFLCAPL  62
            +N S+I IL   +LDAIG+G++MP+LP LL  + +  S  THYG+LLALYA  Q + AP+
Sbjct  1    MNKSIIIILLITVLDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPI  60

Query  63   LGALSDRFGRRPVLLASLAGAALDYLLMALAPTLAW-LYVGRLIagitganaavatayvt  121
            LG LSD++GR+P+LL SL GAALDYLLMA++ TL W LY+GR+IAGITGA +AV ++ ++
Sbjct  61   LGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTL-WMLYIGRIIAGITGATGAVCASAMS  119

Query  122  dvtaEPDRARRFGQLGAMMGIGFIAGPLIGGLLGVLHLRAPFVaaallnalnlllVWRVL  181
            DVT+  +R+R FG LG+  G+G+I GP++GGLLG +  + PF+ AA+ +++ L+L    +
Sbjct  120  DVTPAKNRTRYFGFLGGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFF  179

Query  182  PESRPRSAREGQAVGALNPFASLRRLSGAPALAPLVGIYVIVALVSQAPATLWILYGQEH  241
             E++ R A  ++     +  ++   +    +L   ++ Y I+ L++Q PAT+W+L+ Q +
Sbjct  180  RETQKREALVANRTPENQTASNTVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYR  239

Query  242  FGWSTPVAGLSLAGYGACHALAQAFAIGPliarlgerralalglagdalglaiiaFATAA  301
            F+W+T   G+SLA  G  + + QA+  G L  + GE+ ++ ++++ D +G  ++A     
Sbjct  240  FDWNTTSIGMSLAVLGVLNIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHV  299

Query  302  WVPFALLPLFAAGGMTLPALQAMLARQVDDARQGELQGTLASVASLIGVAGPLV  355
            WV ++ L  +AAGGM  PALQ+ L++ VDD  QG LQGTL S++++ G+ GPL+
Sbjct  300  WVILPALICLAAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLL  353

> NC_016808_R1|83|G76|378774005|YP_005176248.1|Pasteurella_multocida_36950|+|71520..72722|tet(H)|Pmu_03500|tetracycline 
efflux 
protein, class H
Length=400

 Score =  163 bits (601),  Expect = 2e-41, Method: Compositional matrix adjust.
 Identities = 156/356 (44%), Positives = 250/356 (71%), Gaps = 3/356 (0%)

Query  9    LLDAVGIGLIMPILPVLLRSLGGLDagslhygallaayalMQFLFSPILGALSDRFGRRP  68
            +LDA+GIGLIMP+LP LL  + + ++ + HYG LLA YA MQ +F+PILG LSD++GR+P
Sbjct  13   VLDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPILGRLSDKYGRKP  72

Query  69   VLLISLAGAAADYLLMAFAPTLAW-LYLGRLLAGITGANMAVATAYVTDITPAGQRARRf  127
            +LL+SL GAA DYLLMAF+ TL W LY+GR++AGITGA  AV ++ ++D+TPA +R+R F
Sbjct  73   ILLFSLLGAALDYLLMAFSTTL-WMLYIGRIIAGITGATGAVCASAMSDVTPAKNRTRYF  131

Query  128  glvgavfgvgfivgPLLGGSLGEWhlhapflaaaamnalnlamaffllpESRKPRTRAAE  187
            G++G+ FGVG+I+GP+LGG LG+   H PF+ AA  +++ L ++++++ E++K  +  A+
Sbjct  132  GFLGGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFRETQKREALVAN  191

Query  188  KIRLNPFSSLR-RLHGKPGLLPLAGIYLIMALVSQAPATLWILYGQDRFGWSMMVAGLSL  246
            +   N  +S    +  K +L    + Y+I+ L++Q PAT+W+L+ Q RF+W+    G+SL
Sbjct  192  RTPENQTASNTVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYRFDWNTTSIGMSL  251

Query  247  AGYGACHALSQAFAIGPLVARLGERKALLIGLTADALGLVLLSIATRGWapfallpffaa  306
            A  G  + + QA+  G L  + GE+ +++I+++ D +G +LL+   + W  ++ L  +AA
Sbjct  252  AVLGVLNIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHVWVILPALICLAA  311

Query  307  ggmalPALQALMAHKVDDDHQGELQGTLASMGSLIGVAGPLMATALYAATRDVWPG  362
            GGM+ PALQ+ ++  VDD+ QG LQGTL S+ ++ G+ GPL+ + +Y+ +   W G
Sbjct  312  GGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYSYSVAYWDG  367

> NC_016808_R1|83|G76|378774005|YP_005176248.1|Pasteurella_multocida_36950|+|71520..72722|tet(H)|Pmu_03500|tetracycline 
efflux 
protein, class H
Length=400

 Score =  143 bits (527),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 154/354 (44%), Positives = 240/354 (68%), Gaps = 2/354 (0%)

Query  1    MNPSLIAILATVLLDAIGVGIVMPILPGLLHSLASAGSTDTHYGILLALYAFAQFLCAPL  60
            MN S+I IL   +LDAIG+G++MP+LP LL+ + S  S  THYG+LLALYA  Q + AP+
Sbjct  1    MNKSIIIILLITVLDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPI  60

Query  61   LGALSDRFGRRPVLLVSLAGAALDYLLMALAPTLAW-LYVGRLIAGItganvavatayvt  119
            LG LSD++GR+P+LL SL GAALDYLLMA++ TL W LY+GR+IAGITGA  AV ++ ++
Sbjct  61   LGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTL-WMLYIGRIIAGITGATGAVCASAMS  119

Query  120  dvtaEPDRARRFGQLGAMMgigfiagpliggllgalHVRAPFvaaavlnalnlalvWRAL  179
            DVT+  +R+R FG LG+  G+G+I GP++GGLLG +  + PF+ AA+ +++ L L    +
Sbjct  120  DVTPAKNRTRYFGFLGGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFF  179

Query  180  PESRPRSAREGHAVGALNPFASLRRLSGAPALAPLIGIYVIVALVSQAPATLWILYGQEH  239
             E++ R A  ++     +  ++   +    +L   ++ Y I+ L++Q PAT+W+L+ Q +
Sbjct  180  RETQKREALVANRTPENQTASNTVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYR  239

Query  240  FGWSTPIAGLSLAGYGACHALAQAFAIGPliarlgerralalglagdalglaaiafataa  299
            F+W+T   G+SLA  G  + + QA+  G L  + GE+ ++ ++++ D +G   +A     
Sbjct  240  FDWNTTSIGMSLAVLGVLNIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHV  299

Query  300  WVPFALLPLFAAGGMTLPALQAMLARQVDDARQGELQGALASVASLIGVAGPLV  353
            WV ++ L  +AAGGM  PALQ+ L++ VDD  QG LQG+L S++++ G+ GPL+
Sbjct  300  WVILPALICLAAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLL  353

> NC_016808_R1|83|G76|378774005|YP_005176248.1|Pasteurella_multocida_36950|+|71520..72722|tet(H)|Pmu_03500|tetracycline 
efflux 
protein, class H
Length=400

 Score =  141 bits (519),  Expect = 7e-35, Method: Compositional matrix adjust.
 Identities = 123/284 (44%), Positives = 203/284 (72%), Gaps = 5/284 (1%)

Query  14   TLDAAGAGLIMPVLPGLLDQLGDAAATPAHYGVLLSLYALAQCLAAPVLGALSDRYGRRP  73
             LDA G GLIMPVLP LL+++    + ++HYGVLL+LYA  Q + AP+LG LSD+YGR+P
Sbjct  13   VLDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPILGRLSDKYGRKP  72

Query  74   VLLVSLAGAAVDYLVMAAAPALWVLYagrilagitgatgavagaciadagDPSRRARRFG  133
            +LL SL GAA+DYL+MA + +LW+LY GRI+AGITGATGAV ++ ++D   +  R+R FG
Sbjct  73   ILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAVCASAMSDVTPAKNRTRYFG  132

Query  134  QLSACFglgmilgpalgglaglagaRMPfvaaaaangvafltalaWLPES-RRGARAPWS  192
             L++ FG+G+I+GP LGGL G  +A+MPF+ AA ++++ ++ +L  + E+ +R A  +  
Sbjct  133  FLGGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFRETQKREALVANR  192

Query  193  WRALDPIGGLRQALGGKNLAGLLWV--FLVMQMAGQVPGSLWVLYGQDRFQWDAAAVGLS  250
                +  +     +  K+L   +W+  ++++Q+ GQ+P+++WVL+ Q RF+W+++++G+S
Sbjct  193  TPENQTASNTVTVFFKKSL--YFWLATYFIIQLIGQIPATIWVLFTQYRFDWNTTSIGMS  250

Query  251  LAGFGALHAVAQATLPGPLSARLGERGALVVGMAADAAGYVLLA  294
            LA +G L+   QA ++G L+ + GE+ +++++M+ D  G +LLA
Sbjct  251  LAVLGVLNIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLA  294