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Homologs of Z1644 gene of NC_002655_P2

DNA-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) CP0104
( - )

NC_004851
(Shigella flexneri 301)

e-298

2) EcSMS35_1126
( - )

NC_010498
(Escherichia coli SMS-3-5)

e-272

3) ibrB
( - )

NC_011742
(Escherichia coli S88)

e-254

91.5

4) ibrB
( - )

NC_011750
(Escherichia coli IAI39)

e-218

86.3

• Sequence Alignments

1) CP0104 in NC_004851


>NC_002655_P2|82|G82|15801130|NP_287147.1|Escherichia_coli_O157:H7_EDL933|+|68390..69028|-|Z1644|hypothetical 
          Length = 639

 Score = 1021 bits (2635), Expect = e-298
 Identities = 568/639 (89%)
 Strand = Plus / Plus

Query: 1   atgggggactctgtgacaccggagatacttggcaacatgattcgtcagtatttcagtcag 60
           |||||||| |||||||||||||||||| |||||||||||||||||||||| ||||| |||
Sbjct: 1   atgggggattctgtgacaccggagataattggcaacatgattcgtcagtacttcagccag 60

Query: 61  gtacgaactgaaaaagagagcatacaggctctgaatcatctgcgcagagtgcttcatgag 120
           | |||| | ||| |||||| ||||||||| || ||||| |||||||||||||||||||| 
Sbjct: 61  gaacgaccagaagaagagaccatacaggcccttaatcacctgcgcagagtgcttcatgaa 120

Query: 121 gtcagtccttttgcacaggagcctgtggactgtgtgttgtgggtgaaagcggatgaggtg 180
           ||||||||||||||||| ||||| |||||||||||| ||||||| ||||| |||||||||
Sbjct: 121 gtcagtccttttgcacatgagccagtggactgtgtgctgtgggtaaaagcagatgaggtg 180

Query: 181 gtggccaacgattacaaccctaatgtcatggcactaggtgagaaaaaactactgaaacag 240
           |||||||| |||||||| |||||||||||||| |  |||||||| ||||| ||||| |||
Sbjct: 181 gtggccaatgattacaatcctaatgtcatggcgccgggtgagaagaaactgctgaagcag 240

Query: 241 tctctggagaaagatggtttcacacaaccggtggtggtgtcagaggagaagaatcattat 300
           || |||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||| 
Sbjct: 241 tcactggagaaagatggtttcacacaaccggtggtggtgtctgaggaaaagaaccattac 300

Query: 301 ctggtggtggatggttttcatcgtcagttactggggcgggaagcagatgcaggaaaacgc 360
           ||||||||||||||||||||||| ||| | |||||  ||||||||| | | |||||||| 
Sbjct: 301 ctggtggtggatggttttcatcgccaggtgctgggcagggaagcaggtacgggaaaacgt 360

Query: 361 ctgaggggctggttgcctgtagcctgcattaatccggagagaaagggacaggccgcacgt 420
           |||| ||||||| |||| || | ||| ||||||||||||||||||||||||||| |||||
Sbjct: 361 ctgaagggctggctgccggtggtctgtattaatccggagagaaagggacaggcctcacgt 420

Query: 421 at-gccgcgaccattcgacataaccgggccagggggaaacaccagatcactttaatgtct 479
           || || |||||||| |||||||||||||||||||| ||||| ||||| || | |||||||
Sbjct: 421 attgctgcgaccatccgacataaccgggccaggggcaaacatcagataacctcaatgtct 480

Query: 480 gatattgtcagggatctttcacgtctgggctggacgaatgaacgtattggtacagagctg 539
           |||||||||||||| || || || |||||||||||||||||||| |||||||| ||||||
Sbjct: 481 gatattgtcagggacctgtcgcgcctgggctggacgaatgaacgcattggtacggagctg 540

Query: 540 ggaatggaccaggatgaagtgctgaggctgaaacagattagcgggctgacagagttgttt 599
           || ||||||||||||||||| || ||  |||||||||||||||||||||| ||| |||||
Sbjct: 541 ggtatggaccaggatgaagttctcagattgaaacagattagcgggctgacggagctgttt 600

Query: 600 caggaagaggatttcagctcggcttggacggttcgttga 638
           |||||||||||||||||| |||| ||||||||||| |||
Sbjct: 601 caggaagaggatttcagcccggcatggacggttcgctga 639

2) EcSMS35_1126 in NC_010498


>NC_002655_P2|82|G82|15801130|NP_287147.1|Escherichia_coli_O157:H7_EDL933|+|68390..69028|-|Z1644|hypothetical 
          Length = 639

 Score = 932 bits (2406), Expect = e-272
 Identities = 530/613 (86%)
 Strand = Plus / Plus

Query: 33  attgagcaacatgattcgacagtacttcagtcaggaacgatctgaagaagagaccatacg 92
           |||| ||||||||||||| ||||||||||| ||||||||| | |||||||||||||||| 
Sbjct: 28  attg-gcaacatgattcgtcagtacttcagccaggaacgaccagaagaagagaccataca 86

Query: 93  agcccttaatcatctgcgcagggtgttgcatgaggtcagcccttttgcacaggagcctgt 152
            ||||||||||| |||||||| ||| | ||||| ||||| ||||||||||| ||||| ||
Sbjct: 87  ggcccttaatcacctgcgcagagtgcttcatgaagtcagtccttttgcacatgagccagt 146

Query: 153 ggactgtgtgttgtgggtgaaagcgaatgaggtggtggccaacgattacaatcccaatgt 212
           |||||||||| ||||||| |||||  |||||||||||||||| ||||||||||| |||||
Sbjct: 147 ggactgtgtgctgtgggtaaaagcagatgaggtggtggccaatgattacaatcctaatgt 206

Query: 213 catgtcttccagtgaaaaaaaactgcttaaacattcactggagcaggatggattcacgca 272
           |||| |  |  |||| || |||||||| || || ||||||||| | ||||| ||||| ||
Sbjct: 207 catggcgccgggtgagaagaaactgctgaagcagtcactggagaaagatggtttcacaca 266

Query: 273 gcctgtggtggtttcggaagagaaggagcattatctggtagtggatggttttcatcgtca 332
            || |||||||| || || || ||| | ||||| ||||| ||||||||||||||||| ||
Sbjct: 267 accggtggtggtgtctgaggaaaagaaccattacctggtggtggatggttttcatcgcca 326

Query: 333 gttgctgggcaggaaagcggatacgagaaaacgtctgaagggctggctgccagtggcctg 392
           | ||||||||||| |||| | |||| ||||||||||||||||||||||||| |||| |||
Sbjct: 327 ggtgctgggcagggaagcaggtacgggaaaacgtctgaagggctggctgccggtggtctg 386

Query: 393 tattaatccagagagaaagggataggcatcacgtattgccgcgaccatacggcataaccg 452
           ||||||||| |||||||||||| |||| ||||||||||| |||||||| || ||||||||
Sbjct: 387 tattaatccggagagaaagggacaggcctcacgtattgctgcgaccatccgacataaccg 446

Query: 453 tgccaggggaaaacaccagataacgtcaatgtctgacattgtcagggacctttcgcgtct 512
            |||||||| ||||| |||||||| ||||||||||| |||||||||||||| ||||| ||
Sbjct: 447 ggccaggggcaaacatcagataacctcaatgtctgatattgtcagggacctgtcgcgcct 506

Query: 513 gggctggacagatgagcgtattggcacagagttgggcatggatcaggatgaagtgctgag 572
           |||||||||  |||| || ||||| || ||| |||| ||||| ||||||||||| || ||
Sbjct: 507 gggctggacgaatgaacgcattggtacggagctgggtatggaccaggatgaagttctcag 566

Query: 573 gctcaaacagattagcgggctgacagagctgtttcaggaagagaatttcagcccggcatg 632
             | |||||||||||||||||||| |||||||||||||||||| ||||||||||||||||
Sbjct: 567 attgaaacagattagcgggctgacggagctgtttcaggaagaggatttcagcccggcatg 626

Query: 633 gacggttcgttga 645
           ||||||||| |||
Sbjct: 627 gacggttcgctga 639


 Score = 39 bits (102), Expect = 4e-03
 Identities = 20/20 (100%)
 Strand = Plus / Plus

Query: 1  atgggggattctgtgacacc 20
          ||||||||||||||||||||
Sbjct: 1  atgggggattctgtgacacc 20

3) ibrB in NC_011742


>NC_002655_P2|82|G82|15801130|NP_287147.1|Escherichia_coli_O157:H7_EDL933|+|68390..69028|-|Z1644|hypothetical 
          Length = 639

 Score = 872 bits (2251), Expect = e-254
 Identities = 477/524 (91%)
 Strand = Plus / Plus

Query: 41  acatgattcgtcagtacttcagccaggaacgatcagaaaaagagactatacaggctctga 100
           |||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| || |
Sbjct: 35  acatgattcgtcagtacttcagccaggaacgaccagaagaagagaccatacaggccctta 94

Query: 101 atcatctgcgcagggtacttcatgaagtcagcccttttgcacaggagcctgtggactgtg 160
           |||| |||||||| || |||||||||||||| ||||||||||| ||||| ||||||||||
Sbjct: 95  atcacctgcgcagagtgcttcatgaagtcagtccttttgcacatgagccagtggactgtg 154

Query: 161 tgctgtgggtgaaagcagatgaggtggtggccaacgattataaccccaatgtcatggcgc 220
           |||||||||| ||||||||||||||||||||||| ||||| || || |||||||||||||
Sbjct: 155 tgctgtgggtaaaagcagatgaggtggtggccaatgattacaatcctaatgtcatggcgc 214

Query: 221 cgggtgagaagaaactgctgaagcagtcactggagaaagatggtttcacccaacccgtgg 280
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 215 cgggtgagaagaaactgctgaagcagtcactggagaaagatggtttcacacaaccggtgg 274

Query: 281 tggtgtcggcggagaagaacccctatctggtggtggatggttttcatcgtcagttactgg 340
           ||||||| | ||| |||||||  || ||||||||||||||||||||||| ||| | ||||
Sbjct: 275 tggtgtctgaggaaaagaaccattacctggtggtggatggttttcatcgccaggtgctgg 334

Query: 341 gcagggaagcaggtacaggaaaacgcctgaaaggctggttgccagtggcctgtattaatc 400
           |||||||||||||||| |||||||| ||||| |||||| |||| |||| |||||||||||
Sbjct: 335 gcagggaagcaggtacgggaaaacgtctgaagggctggctgccggtggtctgtattaatc 394

Query: 401 cggaaagaaagggacaggccacacgtatggcggccaccatacggcataaccgggccaggg 460
           |||| ||||||||||||||| ||||||| || || ||||| || ||||||||||||||||
Sbjct: 395 cggagagaaagggacaggcctcacgtattgctgcgaccatccgacataaccgggccaggg 454

Query: 461 gtaaacaccagataacctcaatgtctgatattgtcagggacctgtcacgcctgggctgga 520
           | ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 455 gcaaacatcagataacctcaatgtctgatattgtcagggacctgtcgcgcctgggctgga 514

Query: 521 cggatgaacgcattggtacagagcctggggatggaccaggatga 564
           || |||||||||||||||| |||| |||| ||||||||||||||
Sbjct: 515 cgaatgaacgcattggtacggagc-tgggtatggaccaggatga 557


 Score = 39 bits (102), Expect = 4e-03
 Identities = 20/20 (100%)
 Strand = Plus / Plus

Query: 1  atgggggattctgtgacacc 20
          ||||||||||||||||||||
Sbjct: 1  atgggggattctgtgacacc 20

4) ibrB in NC_011750


>NC_002655_P2|82|G82|15801130|NP_287147.1|Escherichia_coli_O157:H7_EDL933|+|68390..69028|-|Z1644|hypothetical 
          Length = 639

 Score = 754 bits (1945), Expect = e-218
 Identities = 427/495 (86%)
 Strand = Plus / Plus

Query: 1   gtggactgtgtgttgtgggtgaaagcggatgaggtggtggccaacgattacaatcccaat 60
           |||||||||||| ||||||| ||||| ||||||||||||||||| ||||||||||| |||
Sbjct: 145 gtggactgtgtgctgtgggtaaaagcagatgaggtggtggccaatgattacaatcctaat 204

Query: 61  gtcatgtcttccagtgaaaaaaaactgcttaaacattcactggagcaggatggattcacg 120
           |||||| |  |  |||| || |||||||| || || ||||||||| | ||||| ||||| 
Sbjct: 205 gtcatggcgccgggtgagaagaaactgctgaagcagtcactggagaaagatggtttcaca 264

Query: 121 cagcctgtggtggtttcggaagagaaggagcattatctggtcgtggatggttttcatcgt 180
           || || |||||||| || || || ||| | ||||| ||||| ||||||||||||||||| 
Sbjct: 265 caaccggtggtggtgtctgaggaaaagaaccattacctggtggtggatggttttcatcgc 324

Query: 181 cagttgctgggcaggaaagcggatacgagaaaacgtctgaagggctggctgccagtgacc 240
           ||| ||||||||||| |||| | |||| ||||||||||||||||||||||||| |||  |
Sbjct: 325 caggtgctgggcagggaagcaggtacgggaaaacgtctgaagggctggctgccggtggtc 384

Query: 241 tgtattaatccggaaagaaagggacaggcatcacgtattgccgcaaccatacggcataac 300
           |||||||||||||| |||||||||||||| ||||||||||| || ||||| || ||||||
Sbjct: 385 tgtattaatccggagagaaagggacaggcctcacgtattgctgcgaccatccgacataac 444

Query: 301 cgtgccaggggaaaacaccagataacgtcaatgtctgacattgtcagggacctttcgcgt 360
           || |||||||| ||||| |||||||| ||||||||||| |||||||||||||| ||||| 
Sbjct: 445 cgggccaggggcaaacatcagataacctcaatgtctgatattgtcagggacctgtcgcgc 504

Query: 361 ctgggctggacagatgagcgtattggcacagagttgggcatggaccaggatgaagtgctg 420
           |||||||||||  |||| || ||||| || ||| |||| ||||||||||||||||| || 
Sbjct: 505 ctgggctggacgaatgaacgcattggtacggagctgggtatggaccaggatgaagttctc 564

Query: 421 aggctgaaacagattagcgggctgacagagctgtttcaggaagagaatttcagcccttca 480
           ||  |||||||||||||||||||||| |||||||||||||||||| ||||||||||  ||
Sbjct: 565 agattgaaacagattagcgggctgacggagctgtttcaggaagaggatttcagcccggca 624

Query: 481 tggacggttcgttga 495
           ||||||||||| |||
Sbjct: 625 tggacggttcgctga 639