Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
TraG/TraD family protein |
NC_021994 (Enterococcus faecium AUS0085) |
0.0 |
100 |
|
TraG/TraD family protein |
NC_017022 (Enterococcus faecium Aus0004) |
0.0 |
100 |
|
Type IV secretory pathway, VirD4 components |
NC_021020 (Faecalibacterium prausnitzii SL3/3) |
0.0 |
96 |
|
hypothetical protein |
NC_014169 (Bifidobacterium longum JDM301) |
5e-164 |
86 |
|
Type IV secretory pathway, VirD4 components |
NC_021013 (Ruminococcus bromii L2-63) |
4e-156 |
79 |
|
conjugative transfer protein Tn1549-like, CTn4-Orf4 |
NC_009089 (Clostridium difficile 630) |
6e-155 |
77 |
|
Type IV secretory pathway, VirD4 components |
NC_021015 ([Ruminococcus] torques L2-14) |
1e-154 |
76 |
|
TRAG family protein |
NC_014828 (Ethanoligenens harbinense YUAN-3) |
2e-147 |
67 |
|
hypothetical protein |
NC_018867 (Dehalobacter sp. CF) |
5e-146 |
68 |
|
hypothetical protein |
NC_022246 (Streptococcus intermedius B196) |
9e-144 |
70 |
|
hypothetical protein |
NC_016048 (Oscillibacter valericigenes Sjm18-20) |
1e-143 |
68 |
|
Type IV secretory pathway, VirD4 components |
NC_021022 ([Ruminococcus] obeum A2-162) |
4e-143 |
67 |
|
conjugative transfer protein Tn1549-like, CTn5-Orf5 |
NC_009089 (Clostridium difficile 630) |
1e-142 |
70 |
|
hypothetical protein |
NC_022239 (Streptococcus anginosus C238) |
2e-142 |
70 |
|
putative conjugal transfer protein |
NC_022246 (Streptococcus intermedius B196) |
9e-143 |
69 |
|
conjugative transfer protein Tn1549-like, CTn2-Orf5 |
NC_009089 (Clostridium difficile 630) |
2e-142 |
69 |
|
hypothetical protein |
NC_022237 (Streptococcus intermedius C270) |
2e-142 |
69 |
|
TraG family protein |
NC_016630 (Filifactor alocis ATCC 35896) |
3e-142 |
70 |
|
Protein virD4 |
NC_019042 (Streptococcus dysgalactiae AC-2713) |
1e-141 |
69 |
|
putative conjugal transfer protein |
NC_017567 (Streptococcus dysgalactiae ATCC 12394) |
1e-141 |
69 |
|
hypothetical protein |
NC_022239 (Streptococcus anginosus C238) |
3e-141 |
68 |
|
putative conjugal transfer protein |
NC_017620 (Streptococcus suis D9) |
3e-137 |
67 |
|
TraG family protein |
NC_022239 (Streptococcus anginosus C238) |
1e-135 |
65 |
|
TraG family protein |
NC_004668 (Enterococcus faecalis V583) |
1e-133 |
64 |
|
Type IV secretory pathway, VirD4 components |
NC_021009 (Coprococcus catus GD/7) |
3e-133 |
70 |
|
Type IV secretory pathway, VirD4 components |
NC_021019 (Eubacterium cylindroides T2-87) |
4e-133 |
66 |
|
Type IV secretory pathway, VirD4 components |
NC_021022 ([Ruminococcus] obeum A2-162) |
6e-133 |
70 |
|
Type IV secretory pathway, VirD4 components |
NC_021014 (Ruminococcus sp. SR1/5) |
9e-131 |
64 |
|
TRAG family protein |
NC_014376 (Clostridium saccharolyticum WM1) |
1e-125 |
65 |
|
Type IV secretory pathway, VirD4 components |
NC_021042 (Faecalibacterium prausnitzii L2/6) |
1e-125 |
61 |
|
Type IV secretory pathway, VirD4 components |
NC_021042 (Faecalibacterium prausnitzii L2/6) |
1e-124 |
63 |
|
TraG family protein |
NC_016630 (Filifactor alocis ATCC 35896) |
7e-119 |
60 |
|
plasmid transfer factor-like protein |
NC_009706 (Clostridium kluyveri DSM 555) |
4e-114 |
55 |
|
Type IV secretory pathway, VirD4 components |
NC_021047 (Clostridium saccharolyticum K10) |
2e-105 |
53 |
|
Type IV secretory pathway, VirD4 components |
NC_021042 (Faecalibacterium prausnitzii L2/6) |
9e-103 |
53 |
|
Type IV secretory pathway, VirD4 components |
NC_021042 (Faecalibacterium prausnitzii L2/6) |
2e-102 |
54 |
|
conjugal plasmid transfer ATPase |
NC_012781 (Eubacterium rectale ATCC 33656) |
5e-95 |
53 |
|
conjugal plasmid transfer ATPase |
NC_012781 (Eubacterium rectale ATCC 33656) |
5e-95 |
53 |
|
conjugal transfer protein |
NC_018081 (Enterococcus hirae ATCC 9790) |
5e-95 |
50 |
|
Type IV secretory pathway VirD4 protein-like protein |
NC_013216 (Desulfotomaculum acetoxidans DSM 771) |
9e-79 |
55 |
|
Type IV secretory pathway, VirD4 components |
NC_021009 (Coprococcus catus GD/7) |
2e-71 |
43 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='NC_021994_R1' AND ph.id_pai_orf='8' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc