Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
DNA primase |
NC_010554 (Proteus mirabilis HI4320) |
2e-152 |
100 |
|
protein of unknown function DUF1738 |
NC_022268 (Serratia sp. ATCC 39006) |
2e-86 |
55 |
|
hypothetical protein |
NC_011745 (Escherichia coli ED1a) |
5e-84 |
56 |
|
antirestriction protein |
NC_016845 (Klebsiella pneumoniae HS11286) |
4e-83 |
56 |
|
antirestriction protein |
NC_022082 (Klebsiella pneumoniae JM45) |
4e-83 |
56 |
|
antirestriction protein |
NC_017641 (Escherichia coli UMNK88) |
2e-82 |
59 |
|
hypothetical protein |
NC_010102 (Salmonella enterica SGSC4150; SPB7) |
2e-80 |
56 |
|
antirestriction protein ArdC |
NC_014304 (Erwinia billingiae Eb661) |
1e-79 |
56 |
|
hypothetical protein |
NC_014029 (Yersinia pestis Z176003) |
1e-79 |
54 |
|
antirestriction protein |
NC_009708 (Yersinia pseudotuberculosis IP 31758) |
6e-80 |
53 |
|
antirestriction protein |
NC_021659 (Serratia plymuthica S13) |
9e-80 |
54 |
|
hypothetical protein |
NC_014121 (Enterobacter cloacae ATCC 13047) |
1e-79 |
52 |
|
antirestriction protein |
NC_017531 (Pantoea ananatis AJ13355) |
2e-79 |
54 |
|
hypothetical protein |
NC_009832 (Serratia proteamaculans 568) |
3e-79 |
53 |
|
antirestriction protein ArdC |
NC_016816 (Pantoea ananatis LMG 5342) |
5e-79 |
54 |
|
hypothetical protein |
NC_008800 (Yersinia enterocolitica 8081) |
8e-79 |
55 |
|
antirestriction protein |
NC_017554 (Pantoea ananatis PA13) |
1e-78 |
54 |
|
hypothetical protein |
NC_015567 (Serratia plymuthica AS9) |
3e-78 |
53 |
|
hypothetical protein |
NC_015566 (Serratia sp. AS12) |
3e-78 |
53 |
|
hypothetical protein |
NC_017573 (Serratia sp. AS13) |
3e-78 |
53 |
|
hypothetical protein |
NC_009832 (Serratia proteamaculans 568) |
3e-77 |
52 |
|
hypothetical protein |
NC_021818 (Salmonella enterica CFSAN002050) |
3e-77 |
55 |
|
protein ardC |
NC_017390 (Erwinia pyrifoliae DSM 12163) |
2e-76 |
53 |
|
protein ardC |
NC_017390 (Erwinia pyrifoliae DSM 12163) |
2e-76 |
53 |
|
hypothetical protein |
NC_012214 (Erwinia pyrifoliae Ep1/96) |
2e-76 |
53 |
|
antirestriction protein |
NC_012214 (Erwinia pyrifoliae Ep1/96) |
2e-76 |
53 |
|
hypothetical protein |
NC_017445 (Erwinia sp. Ejp617) |
4e-76 |
53 |
|
hypothetical protein |
NC_009832 (Serratia proteamaculans 568) |
5e-76 |
53 |
|
hypothetical protein |
NC_012779 (Edwardsiella ictaluri 93-146) |
7e-76 |
55 |
|
hypothetical protein |
NC_017445 (Erwinia sp. Ejp617) |
9e-76 |
53 |
|
putative antirestriction protein |
NC_015460 (Gallibacterium anatis UMN179) |
4e-70 |
46 |
|
Antirestriction protein |
NC_020181 (Enterobacter aerogenes EA1509E) |
5e-70 |
49 |
|
hypothetical protein |
NC_010067 (Salmonella enterica RSK2980) |
9e-70 |
48 |
|
conjugative transfer system protein TraC (fragment) |
NC_013716 (Citrobacter rodentium ICC168) |
2e-69 |
49 |
|
Antirestriction protein |
NC_011993 (Escherichia coli LF82) |
3e-69 |
50 |
|
hypothetical protein |
NC_017634 (Escherichia coli NRG 857C) |
3e-69 |
50 |
|
antirestriction protein |
NC_013654 (Escherichia coli SE15) |
1e-68 |
48 |
|
hypothetical protein |
NC_018650 (Escherichia coli 2009EL-2050) |
2e-68 |
48 |
|
hypothetical protein |
NC_018661 (Escherichia coli 2009EL-2071) |
2e-68 |
48 |
|
hypothetical protein |
NC_018658 (Escherichia coli 2011C-3493) |
2e-68 |
48 |
|
antirestriction protein |
NC_021491 (Pseudomonas putida H8234) |
2e-67 |
45 |
|
hypothetical protein |
NC_018220 (Pseudomonas putida DOT-T1E) |
4e-67 |
45 |
|
hypothetical protein |
NC_009512 (Pseudomonas putida F1) |
4e-67 |
45 |
|
antirestriction protein |
NC_021743 (Mannheimia haemolytica D153) |
2e-65 |
47 |
|
antirestriction protein |
NC_021739 (Mannheimia haemolytica D174) |
2e-65 |
47 |
|
DNA primase TraC |
NC_021082 (Mannheimia haemolytica M42548) |
2e-65 |
47 |
|
Antirestriction protein |
NC_020833 (Mannheimia haemolytica USDA-ARS-USMARC-183) |
2e-65 |
47 |
|
antirestriction protein |
NC_021883 (Mannheimia haemolytica USMARC_2286) |
2e-65 |
47 |
|
antirestriction protein |
NC_008309 (Haemophilus somnus 129PT) |
2e-65 |
43 |
|
hypothetical protein |
NC_017986 (Pseudomonas putida ND6) |
1e-64 |
44 |
|
hypothetical protein |
NC_010519 (Haemophilus somnus 2336) |
8e-65 |
44 |
|
antirestriction protein |
NC_021082 (Mannheimia haemolytica M42548) |
8e-65 |
44 |
|
hypothetical protein |
NC_016808 (Pasteurella multocida 36950) |
8e-65 |
44 |
|
hypothetical protein |
NC_015733 (Pseudomonas putida S16) |
2e-64 |
46 |
|
antirestriction protein |
NC_021743 (Mannheimia haemolytica D153) |
3e-64 |
43 |
|
antirestriction protein |
NC_021739 (Mannheimia haemolytica D174) |
3e-64 |
43 |
|
DNA primase TraC |
NC_021082 (Mannheimia haemolytica M42548) |
3e-64 |
43 |
|
Antirestriction protein |
NC_020833 (Mannheimia haemolytica USDA-ARS-USMARC-183) |
3e-64 |
43 |
|
Antirestriction protein |
NC_020834 (Mannheimia haemolytica USDA-ARS-USMARC-185) |
3e-64 |
43 |
|
antirestriction protein |
NC_021883 (Mannheimia haemolytica USMARC_2286) |
3e-64 |
43 |
|
antirestriction protein |
NC_021491 (Pseudomonas putida H8234) |
1e-63 |
45 |
|
hypothetical protein |
NC_010501 (Pseudomonas putida W619) |
2e-63 |
44 |
|
Antirestriction protein |
NC_020834 (Mannheimia haemolytica USDA-ARS-USMARC-185) |
1e-62 |
46 |
|
putative traC-like DNA primase |
NC_012660 (Pseudomonas fluorescens SBW25) |
9e-61 |
44 |
|
dna primase |
NC_016830 (Pseudomonas fluorescens F113) |
7e-59 |
44 |
|
hypothetical protein |
NC_015964 (Haemophilus parainfluenzae T3T1) |
6e-57 |
42 |
|
antirestriction protein |
NC_016809 (Haemophilus influenzae 10810) |
1e-56 |
41 |
|
antirestriction protein |
NC_007146 (Haemophilus influenzae 86-028NP) |
1e-56 |
41 |
|
DNA primase |
NC_002940 (Haemophilus ducreyi 35000HP) |
2e-56 |
42 |
|
probable antirestriction protein |
NC_017451 (Haemophilus influenzae R2866) |
2e-56 |
41 |
|
hypothetical protein |
NC_014532 (Halomonas elongata DSM 2581) |
4e-56 |
44 |
|
DNA primase |
NC_007492 (Pseudomonas fluorescens Pf0-1) |
1e-55 |
45 |
|
Antirestriction protein |
NC_021870 (Salmonella bongori N268-08) |
8e-55 |
45 |
|
antirestriction protein |
NC_018522 (Klebsiella pneumoniae 1084) |
1e-54 |
44 |
|
putative antirestriction protein |
NC_012731 (Klebsiella pneumoniae NTUH-K2044) |
2e-54 |
44 |
|
antirestriction protein |
NC_006154 (Yersinia pseudotuberculosis IP 32953) |
3e-51 |
42 |
|
hypothetical protein |
NC_008254 (Chelativorans sp. BNC1) |
6e-51 |
41 |
|
DNA primase TraC |
NC_006842 (Vibrio fischeri ES114) |
1e-50 |
41 |
|
domain of unknown function DUF1738 |
NC_011664 (Shewanella baltica OS223) |
3e-50 |
41 |
|
antirestriction protein |
NC_002678 (Mesorhizobium loti MAFF303099) |
5e-50 |
43 |
|
antirestriction protein |
NC_011283 (Klebsiella pneumoniae 342) |
5e-50 |
42 |
|
antirestriction protein |
NC_014500 (Dickeya dadantii 3937) |
1e-49 |
41 |
|
antirestriction protein |
NC_011092 (Salmonella enterica CVM19633) |
2e-49 |
44 |
|
hypothetical protein |
NC_012912 (Dickeya zeae Ech1591) |
3e-49 |
42 |
|
antirestriction protein |
NC_011283 (Klebsiella pneumoniae 342) |
3e-48 |
41 |
|
domain of unknown function DUF1738 |
NC_011665 (Shewanella baltica OS223) |
4e-48 |
42 |
|
domain of unknown function DUF1738 |
NC_011668 (Shewanella baltica OS223) |
5e-48 |
42 |
|
putative Antirestriction protein ardC |
NC_011745 (Escherichia coli ED1a) |
6e-48 |
42 |
|
hypothetical protein |
NC_017572 (Shewanella baltica BA175) |
9e-48 |
41 |
|
putative Antirestriction protein ardC |
NC_016612 (Klebsiella oxytoca KCTC 1686) |
1e-47 |
41 |
|
antirestriction protein |
NC_016818 (Rahnella aquatilis CIP 78.65) |
2e-47 |
41 |
|
antirestriction protein |
NC_004547 (Pectobacterium atrosepticum SCRI1043) |
3e-47 |
42 |
|
Putative ardC antirestriction protein |
NC_017845 (Pectobacterium sp. SCC3193) |
4e-47 |
42 |
|
putative Antirestriction protein ardC |
NC_016845 (Klebsiella pneumoniae HS11286) |
1e-46 |
41 |
|
hypothetical protein |
NC_013592 (Dickeya dadantii Ech586) |
8e-47 |
41 |
|
antirestriction protein |
NC_012731 (Klebsiella pneumoniae NTUH-K2044) |
9e-47 |
42 |
|
putative Antirestriction protein ardC |
NC_011751 (Escherichia coli UMN026) |
2e-46 |
41 |
|
antirestriction protein ArdC |
NC_015976 (Sphingobium sp. SYK-6) |
4e-46 |
41 |
|
antirestriction protein ArdC |
NC_017075 (Rubrivivax gelatinosus IL144) |
1e-43 |
41 |
|
peptidase M, neutral zinc metallopeptidase, zinc-binding site |
NC_015259 (Polymorphum gilvum SL003B-26A1) |
3e-26 |
41 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='NC_010554_P1' AND ph.id_pai_orf='8' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc