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Homologs of PMI2554 gene of NC_010554_P1

100

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) PMI2554
( YP_002152273.1 )

DNA primase

NC_010554
(Proteus mirabilis HI4320)

2e-152

100

2) Ser39006_1540
( YP_008521922.1 )

protein of unknown function DUF1738

NC_022268
(Serratia sp. ATCC 39006)

2e-86

3) ECED1_3533
( YP_002399393.1 )

hypothetical protein

NC_011745
(Escherichia coli ED1a)

5e-84

4) KPHS_44720
( YP_005228772.1 )

antirestriction protein

NC_016845
(Klebsiella pneumoniae HS11286)

4e-83

5) N559_0832
( YP_008423902.1 )

antirestriction protein

NC_022082
(Klebsiella pneumoniae JM45)

4e-83

6) UMNK88_5058
( YP_006136697.1 )

antirestriction protein

NC_017641
(Escherichia coli UMNK88)

2e-82

7) SPAB_05436
( YP_001591542.1 )

hypothetical protein

NC_010102
(Salmonella enterica SGSC4150; SPB7)

2e-80

8) EbC_pEb10200880
( YP_003739145.1 )

antirestriction protein ArdC

NC_014304
(Erwinia billingiae Eb661)

1e-79

9) YPZ3_0333
( YP_003566505.1 )

hypothetical protein

NC_014029
(Yersinia pestis Z176003)

1e-79

10) YpsIP31758_3690
( YP_001402644.1 )

antirestriction protein

NC_009708
(Yersinia pseudotuberculosis IP 31758)

6e-80

11) M621_21510
( YP_008161059.1 )

antirestriction protein

NC_021659
(Serratia plymuthica S13)

9e-80

12) ECL_00512
( YP_003611027.1 )

hypothetical protein

NC_014121
(Enterobacter cloacae ATCC 13047)

1e-79

13) PAJ_2514
( YP_005935390.1 )

antirestriction protein

NC_017531
(Pantoea ananatis AJ13355)

2e-79

14) Spro_4123
( YP_001480346.1 )

hypothetical protein

NC_009832
(Serratia proteamaculans 568)

3e-79

15) ardC
( YP_005197385.1 )

antirestriction protein ArdC

NC_016816
(Pantoea ananatis LMG 5342)

5e-79

16) YE3460
( YP_001007622.1 )

hypothetical protein

NC_008800
(Yersinia enterocolitica 8081)

8e-79

17) PAGR_g3827
( YP_005994535.1 )

antirestriction protein

NC_017554
(Pantoea ananatis PA13)

1e-78

18) SerAS9_0327
( YP_004503746.1 )

hypothetical protein

NC_015567
(Serratia plymuthica AS9)

3e-78

19) SerAS12_0327
( YP_004498794.1 )

hypothetical protein

NC_015566
(Serratia sp. AS12)

3e-78

20) SerAS13_0326
( YP_006023209.1 )

hypothetical protein

NC_017573
(Serratia sp. AS13)

3e-78

21) Spro_0395
( YP_001476631.1 )

hypothetical protein

NC_009832
(Serratia proteamaculans 568)

3e-77

22) CFSAN002050_21970
( YP_008262261.1 )

hypothetical protein

NC_021818
(Salmonella enterica CFSAN002050)

3e-77

23) ardC
( YP_005801238.1 )

protein ardC

NC_017390
(Erwinia pyrifoliae DSM 12163)

2e-76

24) ardC
( YP_005804001.1 )

protein ardC

NC_017390
(Erwinia pyrifoliae DSM 12163)

2e-76

25) EpC_04660
( YP_002647503.1 )

hypothetical protein

NC_012214
(Erwinia pyrifoliae Ep1/96)

2e-76

26) EpC_30100
( YP_002649991.1 )

antirestriction protein

NC_012214
(Erwinia pyrifoliae Ep1/96)

2e-76

27) EJP617_17250
( YP_005818293.1 )

hypothetical protein

NC_017445
(Erwinia sp. Ejp617)

4e-76

28) Spro_4058
( YP_001480281.1 )

hypothetical protein

NC_009832
(Serratia proteamaculans 568)

5e-76

29) NT01EI_0363
( YP_002931840.1 )

hypothetical protein

NC_012779
(Edwardsiella ictaluri 93-146)

7e-76

30) EJP617_06360
( YP_005817204.1 )

hypothetical protein

NC_017445
(Erwinia sp. Ejp617)

9e-76

31) UMN179_00348
( YP_004419282.1 )

putative antirestriction protein

NC_015460
(Gallibacterium anatis UMN179)

4e-70

32) ST548_p5004
( YP_007389594.1 )

Antirestriction protein

NC_020181
(Enterobacter aerogenes EA1509E)

5e-70

33) SARI_03152
( YP_001572134.1 )

hypothetical protein

NC_010067
(Salmonella enterica RSK2980)

9e-70

34) traC
( YP_003366813.1 )

conjugative transfer system protein TraC (fragment)

NC_013716
(Citrobacter rodentium ICC168)

2e-69

35) LF82_699
( YP_002559037.1 )

Antirestriction protein

NC_011993
(Escherichia coli LF82)

3e-69

36) NRG857_21000
( YP_006122542.1 )

hypothetical protein

NC_017634
(Escherichia coli NRG 857C)

3e-69

37) ECSF_4160
( YP_003352150.1 )

antirestriction protein

NC_013654
(Escherichia coli SE15)

1e-68

38) O3M_22175
( YP_006772049.1 )

hypothetical protein

NC_018650
(Escherichia coli 2009EL-2050)

2e-68

39) O3O_03115
( YP_006786237.1 )

hypothetical protein

NC_018661
(Escherichia coli 2009EL-2071)

2e-68

40) O3K_22280
( YP_006781113.1 )

hypothetical protein

NC_018658
(Escherichia coli 2011C-3493)

2e-68

41) L483_11800
( YP_008094146.1 )

antirestriction protein

NC_021491
(Pseudomonas putida H8234)

2e-67

42) T1E_4190
( YP_006534813.1 )

hypothetical protein

NC_018220
(Pseudomonas putida DOT-T1E)

4e-67

43) Pput_2959
( YP_001268271.1 )

hypothetical protein

NC_009512
(Pseudomonas putida F1)

4e-67

44) F382_12770
( YP_008235357.1 )

antirestriction protein

NC_021743
(Mannheimia haemolytica D153)

2e-65

45) J451_00020
( YP_008221414.1 )

antirestriction protein

NC_021739
(Mannheimia haemolytica D174)

2e-65

46) traC2
( YP_007884027.1 )

DNA primase TraC

NC_021082
(Mannheimia haemolytica M42548)

2e-65

47) D650_16260
( YP_007666403.1 )

Antirestriction protein

NC_020833
(Mannheimia haemolytica USDA-ARS-USMARC-183)

2e-65

48) N220_08175
( YP_008339079.1 )

antirestriction protein

NC_021883
(Mannheimia haemolytica USMARC_2286)

2e-65

49) HS_1780
( YP_719985.1 )

antirestriction protein

NC_008309
(Haemophilus somnus 129PT)

2e-65

50) YSA_00817
( YP_006384337.1 )

hypothetical protein

NC_017986
(Pseudomonas putida ND6)

1e-64

51) HSM_1683
( YP_001785003.1 )

hypothetical protein

NC_010519
(Haemophilus somnus 2336)

8e-65

52) MHH_c22670
( YP_007884064.1 )

antirestriction protein

NC_021082
(Mannheimia haemolytica M42548)

8e-65

53) Pmu_02920
( YP_005176191.1 )

hypothetical protein

NC_016808
(Pasteurella multocida 36950)

8e-65

54) PPS_2335
( YP_004701776.1 )

hypothetical protein

NC_015733
(Pseudomonas putida S16)

2e-64

55) F382_00020
( YP_008232897.1 )

antirestriction protein

NC_021743
(Mannheimia haemolytica D153)

3e-64

56) J451_12985
( YP_008223914.1 )

antirestriction protein

NC_021739
(Mannheimia haemolytica D174)

3e-64

57) traC1
( YP_007883353.1 )

DNA primase TraC

NC_021082
(Mannheimia haemolytica M42548)

3e-64

58) D650_18140
( YP_007666591.1 )

Antirestriction protein

NC_020833
(Mannheimia haemolytica USDA-ARS-USMARC-183)

3e-64

59) D648_9430
( YP_007668455.1 )

Antirestriction protein

NC_020834
(Mannheimia haemolytica USDA-ARS-USMARC-185)

3e-64

60) N220_04945
( YP_008338447.1 )

antirestriction protein

NC_021883
(Mannheimia haemolytica USMARC_2286)

3e-64

61) L483_22325
( YP_008096231.1 )

antirestriction protein

NC_021491
(Pseudomonas putida H8234)

1e-63

62) PputW619_3336
( YP_001750190.1 )

hypothetical protein

NC_010501
(Pseudomonas putida W619)

2e-63

63) D648_11310
( YP_007668643.1 )

Antirestriction protein

NC_020834
(Mannheimia haemolytica USDA-ARS-USMARC-185)

1e-62

64) PFLU1917
( YP_002871551.1 )

putative traC-like DNA primase

NC_012660
(Pseudomonas fluorescens SBW25)

9e-61

65) PSF113_3295
( YP_005208688.1 )

dna primase

NC_016830
(Pseudomonas fluorescens F113)

7e-59

66) PARA_11700
( YP_004822864.1 )

hypothetical protein

NC_015964
(Haemophilus parainfluenzae T3T1)

6e-57

67) HIB_01280
( YP_005178163.1 )

antirestriction protein

NC_016809
(Haemophilus influenzae 10810)

1e-56

68) traC
( YP_247797.1 )

antirestriction protein

NC_007146
(Haemophilus influenzae 86-028NP)

1e-56

69) traC
( NP_873411.1 )

DNA primase

NC_002940
(Haemophilus ducreyi 35000HP)

2e-56

70) R2866_0565
( YP_005827260.1 )

probable antirestriction protein

NC_017451
(Haemophilus influenzae R2866)

2e-56

71) HELO_4091
( YP_003899160.1 )

hypothetical protein

NC_014532
(Halomonas elongata DSM 2581)

4e-56

72) Pfl01_3033
( YP_348762.1 )

DNA primase

NC_007492
(Pseudomonas fluorescens Pf0-1)

1e-55

73) A464_4485
( YP_008325077.1 )

Antirestriction protein

NC_021870
(Salmonella bongori N268-08)

8e-55

74) A79E_4496
( YP_006638255.1 )

antirestriction protein

NC_018522
(Klebsiella pneumoniae 1084)

1e-54

75) KP1_0590
( YP_002917518.1 )

putative antirestriction protein

NC_012731
(Klebsiella pneumoniae NTUH-K2044)

2e-54

76) ArdC
( YP_068542.1 )

antirestriction protein

NC_006154
(Yersinia pseudotuberculosis IP 32953)

3e-51

77) Meso_3793
( YP_676326.1 )

hypothetical protein

NC_008254
(Chelativorans sp. BNC1)

6e-51

78) VF_B0002
( YP_207132.1 )

DNA primase TraC

NC_006842
(Vibrio fischeri ES114)

1e-50

79) Sbal223_4401
( YP_002360283.1 )

domain of unknown function DUF1738

NC_011664
(Shewanella baltica OS223)

3e-50

80) mlr6154
( NP_106707.1 )

antirestriction protein

NC_002678
(Mesorhizobium loti MAFF303099)

5e-50

81) KPK_1837
( YP_002237681.1 )

antirestriction protein

NC_011283
(Klebsiella pneumoniae 342)

5e-50

82) ardC
( YP_003883746.1 )

antirestriction protein

NC_014500
(Dickeya dadantii 3937)

1e-49

83) SeSA_B0128
( YP_002113004.1 )

antirestriction protein

NC_011092
(Salmonella enterica CVM19633)

2e-49

84) Dd1591_1473
( YP_003003810.1 )

hypothetical protein

NC_012912
(Dickeya zeae Ech1591)

3e-49

85) KPK_1761
( YP_002237608.1 )

antirestriction protein

NC_011283
(Klebsiella pneumoniae 342)

3e-48

86) Sbal223_4521
( YP_002360337.1 )

domain of unknown function DUF1738

NC_011665
(Shewanella baltica OS223)

4e-48

87) Sbal223_4417
( YP_002364241.1 )

domain of unknown function DUF1738

NC_011668
(Shewanella baltica OS223)

5e-48

88) ECED1_2276
( YP_002398215.1 )

putative Antirestriction protein ardC

NC_011745
(Escherichia coli ED1a)

6e-48

89) Sbal175_4395
( YP_006022845.1 )

hypothetical protein

NC_017572
(Shewanella baltica BA175)

9e-48

90) KOX_24630
( YP_005020880.1 )

putative Antirestriction protein ardC

NC_016612
(Klebsiella oxytoca KCTC 1686)

1e-47

91) Rahaq2_1703
( YP_005199716.1 )

antirestriction protein

NC_016818
(Rahnella aquatilis CIP 78.65)

2e-47

92) ardC
( YP_049700.1 )

antirestriction protein

NC_004547
(Pectobacterium atrosepticum SCRI1043)

3e-47

93) W5S_1606
( YP_006282570.1 )

Putative ardC antirestriction protein

NC_017845
(Pectobacterium sp. SCC3193)

4e-47

94) KPHS_34890
( YP_005227789.1 )

putative Antirestriction protein ardC

NC_016845
(Klebsiella pneumoniae HS11286)

1e-46

95) Dd586_2683
( YP_003334229.1 )

hypothetical protein

NC_013592
(Dickeya dadantii Ech586)

8e-47

96) ardC
( YP_002920295.1 )

antirestriction protein

NC_012731
(Klebsiella pneumoniae NTUH-K2044)

9e-47

97) ECUMN_2301
( YP_002413018.1 )

putative Antirestriction protein ardC

NC_011751
(Escherichia coli UMN026)

2e-46

98) SLG_26210
( YP_004835753.1 )

antirestriction protein ArdC

NC_015976
(Sphingobium sp. SYK-6)

4e-46

99) RGE_16400
( YP_005436480.1 )

antirestriction protein ArdC

NC_017075
(Rubrivivax gelatinosus IL144)

1e-43

100) SL003B_0602
( YP_004302331.1 )

peptidase M, neutral zinc metallopeptidase, zinc-binding site

NC_015259
(Polymorphum gilvum SL003B-26A1)

3e-26

• Sequence Alignments

1) PMI2554 in NC_010554


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  531 bits (2004),  Expect = 2e-152, Method: Compositional matrix adjust.
 Identities = 324/324 (100%), Positives = 324/324 (100%), Gaps = 0/324 (0%)

Query  1    MKKSDRKRRPAADKPVRDIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTGFPVNALTGH  60
            MKKSDRKRRPAADKPVRDIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTGFPVNALTGH
Sbjct  1    MKKSDRKRRPAADKPVRDIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTGFPVNALTGH  60

Query  61   SYQGINVLLLWLSAAEQGFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRH  120
            SYQGINVLLLWLSAAEQGFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRH
Sbjct  61   SYQGINVLLLWLSAAEQGFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRH  120

Query  121  GELLRDEHGEVVMTEVPMIKANPLFNIAQCDDLPAHFYENRRLPGEETAGITLPATHRVL  180
            GELLRDEHGEVVMTEVPMIKANPLFNIAQCDDLPAHFYENRRLPGEETAGITLPATHRVL
Sbjct  121  GELLRDEHGEVVMTEVPMIKANPLFNIAQCDDLPAHFYENRRLPGEETAGITLPATHRVL  180

Query  181  DILNASGVKVTSAAQNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLA  240
            DILNASGVKVTSAAQNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLA
Sbjct  181  DILNASGVKVTSAAQNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLA  240

Query  241  REGITSSSLKFGDPLYSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDKKAL  300
            REGITSSSLKFGDPLYSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDKKAL
Sbjct  241  REGITSSSLKFGDPLYSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDKKAL  300

Query  301  FRAAGQARQACEFLLNVAASRQAA  324
            FRAAGQARQACEFLLNVAASRQAA
Sbjct  301  FRAAGQARQACEFLLNVAASRQAA  324

2) Ser39006_1540 in NC_022268


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  312 bits (1170),  Expect = 2e-86, Method: Compositional matrix adjust.
 Identities = 180/328 (55%), Positives = 249/328 (76%), Gaps = 6/328 (1%)

Query  1    MKKTSSARRAPKTERA--DLYQQVTDKIVAALEKGTAPWRRPWRAAQKPAGSSLPANATT  58
            MKK+   RR P ++++  D+YQ+VTD+IVAALEKGT PW+RPWR+++  +G+++P NA T
Sbjct  1    MKKSDRKRR-PAADKPVRDIYQEVTDRIVAALEKGTRPWKRPWRPSE-GTGTGFPVNALT  58

Query  59   GNAYSGINIPLLWMAAEERGFSSDRWLTYRQAQRAGGHIRTGETCSLAVIFKPFEVQAED  118
            G++Y GIN+ LLW++A E+GF+ D WLTYRQAQ+ GGH+R GE  + +VIFKP  V A D
Sbjct  59   GHSYQGINVLLLWLSAAEQGFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKD  118

Query  119  DQGNKLVDDDGKPVMASRAMLKPLQLFNTQQCDGLPAALSDTPATILTQEETETVSAPVM  178
             +G+ L D++G  VM+  +M+K+  LFN  QCD+LPA + +     L  EET  ++ P  
Sbjct  119  RHGELLRDEHGEVVMTEVPMIKANPLFNIAQCDDLPAHFYENRR--LPGEETAGITLPAT  176

Query  179  NRVLEIFNASGVTVNFLNQNRAYYRPVADQIVMPTSGQFFTEADYWSTLLHELVHASGHQ  238
            +RVL+I+NASGV V    QNRAYY P  D+IVMP S+QF  +ADY +TLLHELVH++GH 
Sbjct  177  HRVLDILNASGVKVTSAAQNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHP  236

Query  239  KRLNREGITSSTRQFGDPVYVFEEFIAELGSAFLCAELGVYGEVQHDSYISGWLKALKED  298
             RL REGITSS+ +FGDP+Y FEE++AE+GSAFLCA+L+V GEV+H+SY+ +WL+ LK D
Sbjct  237  SRLAREGITSSSLKFGDPLYSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSD  296

Query  299  KRALFRACRQAREASAFLLDLKVGTESA  326
            K+ALFRA  QAR+A  FLL++  + ++A
Sbjct  297  KKALFRAAGQARQACEFLLNVAASRQAA  324

3) ECED1_3533 in NC_011745


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  304 bits (1140),  Expect = 5e-84, Method: Compositional matrix adjust.
 Identities = 177/320 (56%), Positives = 239/320 (75%), Gaps = 5/320 (1%)

Query  34   MKTKKHTSSPVNKTPERDLYQLVTDRVIEAIEKGVAPWKRPWRSVRTHSGDPMMPVNALT  93
            MK   +   P    P RD+YQ VTDR++ A+EKG  PWKRPWR+  +++ +   PVNALT
Sbjct  1    MKKSDRKRRPAADKPVRDIYQEVTDRIVAALEKGTRPWKRPWRP--SEGTGTGFPVNALT  58

Query  94   RSAYRGINVLLLWLAAEEAGYSSNCWLTYRQAQALGGQVRKGEKSTMAVIYKSWHKQDED  153
              +Y+GINVLLLWL+A E G++ + WLTYRQAQ LGG+VRKGE +T +VI+K+      D
Sbjct  59   GHSYQGINVLLLWLSAAEQGFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKD  118

Query  154  ENGNRIFDAEGNPVMVDVPVLKANPLFNVEQCDGLSLP--EVATTVTENGANDTLNAVAD  211
             +G+ + D +G+ VM +VP++KANPLFN+ QCD+L+    E      E+ A  TL A ++
Sbjct  119  RHGELLRDEHGEVVMTEVPMIKANPLFNIAQCDDLPAHFYENRRLPGEETAGITLPA-TH  177

Query  212  RVLTMVNACGVKIHSLPQDRAYYTPVFDRIVLPLSSQFTSAEDYWSTLLHELVHSTGHAK  271
            RVL ++NA GVK+ S +Q+RAYY+P  DRIV+PLSSQF    DY +TLLHELVHSTGH+ 
Sbjct  178  RVLDILNASGVKVTSAAQNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPS  237

Query  272  RLNREGIVSSGGSYGDERYAFEELIAEMGSAFLCAQLGVTGNVQHENYIGAWLKILRADK  331
            RL REGI SS+  +GD  Y+FEEL+AEMGSAFLCAQL+V G+V+HE+Y+++WL++L++DK
Sbjct  238  RLAREGITSSSLKFGDPLYSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDK  297

Query  332  KALFSACRQAREATEYLLSV  351
            KALF A  QAR+A E+LL+V
Sbjct  298  KALFRAAGQARQACEFLLNV  317

4) KPHS_44720 in NC_016845


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  301 bits (1128),  Expect = 4e-83, Method: Compositional matrix adjust.
 Identities = 179/321 (56%), Positives = 235/321 (74%), Gaps = 6/321 (1%)

Query  1    MKKSTSRSQRVERT---DLYQQVTDRIVAALEKGVPPWRKPWRSVEKYASSPFPVNAATG  57
            MKKS  + +        D+YQ+VTDRIVAALEKG  PW++PWR+ E  +++ FPVNA TG
Sbjct  1    MKKSDRKRRPAADKPVRDIYQEVTDRIVAALEKGTRPWKRPWRPSEG-TGTGFPVNALTG  59

Query  58   GHYNGVNIMLLWLAAEEKGYRSNRWLTYKQAQAVGGQVRKGESSSLGVIFKPFEKQAEDK  117
              Y+G+N++LLWL+A E+G+  + WLTY+QAQ +GG+VRKGE ++  VIFKP    A D+
Sbjct  60   HSYQGINVLLLWLSAAEQGFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDR  119

Query  118  SGSKLFDADGKPVMESRVMAKSLYLFNVEQCDSLPESVVGVTAVPLSQEDVDTVSTPVFN  177
             G  L D +G  VM    M K+  LFN+ QCD LP          L+ E+   ++ P  +
Sbjct  120  HGELLRDEHGEVVMTEVPMIKANPLFNIAQCDDLPAHFYE--NRRLPGEETAGITLPATH  177

Query  178  RILDMLNASGVKATSFSQNRAFYRPSTDEIVLPAVGQFFSDADYWATLLHELVHASGHAK  237
            R+LD+LNASGVK TS +QNRA+Y PS D IV+P  +QF  +ADY ATLLHELVH++GH+ 
Sbjct  178  RVLDILNASGVKVTSAAQNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPS  237

Query  238  RLNREGITSSLSRFGDPIYAFEELIAELGSAFLCAELGVYGEVQHESYFASWLKTLKEDK  297
            RL REGITSS  +FGDP+Y+FEEL+AE+GSAFLCA+L+V GEV+HESY+ SWL+ LK DK
Sbjct  238  RLAREGITSSSLKFGDPLYSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDK  297

Query  298  HAIFRASRQAREACEFLLNLA  318
             A+FRA+ QAR+ACEFLLN+A
Sbjct  298  KALFRAAGQARQACEFLLNVA  318

5) N559_0832 in NC_022082


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  301 bits (1128),  Expect = 4e-83, Method: Compositional matrix adjust.
 Identities = 179/321 (56%), Positives = 235/321 (74%), Gaps = 6/321 (1%)

Query  1    MKKSTSRSQRVERT---DLYQQVTDRIVAALEKGVPPWRKPWRSVEKYASSPFPVNAATG  57
            MKKS  + +        D+YQ+VTDRIVAALEKG  PW++PWR+ E  +++ FPVNA TG
Sbjct  1    MKKSDRKRRPAADKPVRDIYQEVTDRIVAALEKGTRPWKRPWRPSEG-TGTGFPVNALTG  59

Query  58   GHYNGVNIMLLWLAAEEKGYRSNRWLTYKQAQAVGGQVRKGESSSLGVIFKPFEKQAEDK  117
              Y+G+N++LLWL+A E+G+  + WLTY+QAQ +GG+VRKGE ++  VIFKP    A D+
Sbjct  60   HSYQGINVLLLWLSAAEQGFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDR  119

Query  118  SGSKLFDADGKPVMESRVMAKSLYLFNVEQCDSLPESVVGVTAVPLSQEDVDTVSTPVFN  177
             G  L D +G  VM    M K+  LFN+ QCD LP          L+ E+   ++ P  +
Sbjct  120  HGELLRDEHGEVVMTEVPMIKANPLFNIAQCDDLPAHFYE--NRRLPGEETAGITLPATH  177

Query  178  RILDMLNASGVKATSFSQNRAFYRPSTDEIVLPAVGQFFSDADYWATLLHELVHASGHAK  237
            R+LD+LNASGVK TS +QNRA+Y PS D IV+P  +QF  +ADY ATLLHELVH++GH+ 
Sbjct  178  RVLDILNASGVKVTSAAQNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPS  237

Query  238  RLNREGITSSLSRFGDPIYAFEELIAELGSAFLCAELGVYGEVQHESYFASWLKTLKEDK  297
            RL REGITSS  +FGDP+Y+FEEL+AE+GSAFLCA+L+V GEV+HESY+ SWL+ LK DK
Sbjct  238  RLAREGITSSSLKFGDPLYSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDK  297

Query  298  HAIFRASRQAREACEFLLNLA  318
             A+FRA+ QAR+ACEFLLN+A
Sbjct  298  KALFRAAGQARQACEFLLNVA  318

6) UMNK88_5058 in NC_017641


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  298 bits (1118),  Expect = 2e-82, Method: Compositional matrix adjust.
 Identities = 191/327 (59%), Positives = 249/327 (77%), Gaps = 12/327 (3%)

Query  1    MKTKKHTSRAVNKTPERDLYQLVTDRIVTAIENGVPPWKRPWRSARNGAGEPEMMPVNAL  60
            MK   +  R+    P RD+YQ VTDRIV+A+E+G  PWKRPWR++ +G+G     PVNAL
Sbjct  1    MKKSDRKRRPAADKPVRDIYQEVTDRIVAALEKGTRPWKRPWRPS-EGTGTG--FPVNAL  57

Query  61   TGKPYTGVNVLLLWLTADEAGYASNHWLTYRQAQQLGGHVRKGEVATLAVIYKDWKRQAV  120
            TG +Y G+NVLLLWL+A E G++ + WLTYRQAQQLGGHVRKGE+AT +VI+K  K  A 
Sbjct  58   TGHSYQGINVLLLWLSAAEQGFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAK  117

Query  121  DEHGNRLTDSEGEPLMETVPVLKANPLFNVGQCDGLPEHL-----MVKAEGSADALPADT  175
            D HG+ L D +GE +M  VP++KANPLFN++QCD+LP H+     +   E ++ +LPA  
Sbjct  118  DRHGELLRDEHGEVVMTEVPMIKANPLFNIAQCDDLPAHFYENRRLPGEETAGITLPA--  175

Query  176  ISERvlpvlngsgvsvsslpQDRAFYRPDTDRIVMPLSSQFDSVADYWTTLLHELVHSTG  235
             ++RVL +LN+SGV V+S +Q+RA+Y P  DRIVMPLSSQFD  ADY +TLLHELVHSTG
Sbjct  176  -THRVLDILNASGVKVTSAAQNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTG  234

Query  236  HEKRLRRAGISSFAGR-KSPEYAFEELIAEMGSAFLCAHLGIAGDVQHESYIDGWLNVLK  294
            H  RL R GI+S + +   P Y+FEEL+AEMGSAFLCA+L++ G+V+HESY+D+WL VLK
Sbjct  235  HPSRLAREGITSSSLKFGDPLYSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLK  294

Query  295  SDKKALFRACRQAREASEYLLTLRTSQ  321
            SDKKALFRA  QAR+A E+LL + +S+
Sbjct  295  SDKKALFRAAGQARQACEFLLNVAASR  321

7) SPAB_05436 in NC_010102


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  292 bits (1093),  Expect = 2e-80, Method: Compositional matrix adjust.
 Identities = 177/319 (56%), Positives = 244/319 (77%), Gaps = 4/319 (1%)

Query  1    MNKSIRGRKAAPAQKA-DLYQQVTDKIIAALEKGVPPWRRPWRSAQNVHGSALPVNATTG  59
            M+KS R R++A+ +   D+YQ+VTD+I+AALEKG  PW+RPWR+++   G+++PVNA TG
Sbjct  1    MKKSDRKRRPAADKPVRDIYQEVTDRIVAALEKGTRPWKRPWRPSEGT-GTGFPVNALTG  59

Query  60   RHYSGVNIPLLWMSAEERGFSSDRWLTYQQAKAVGGQVRKGETSSMAIIYKPFEKQATDG  119
            + Y G+N+ LLW+SA E+GF+ D WLTY+QA+ +GG+VRKGE ++ ++I+KP    A D 
Sbjct  60   HSYQGINVLLLWLSAAEQGFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDR  119

Query  120  NDNKLFDKDGNPVMESLAMLKPLQLFNVAQCDGLPDAVAGMPPTEAEEERHSILTEQQQE  179
            +++ L D +G+ VM  ++M+K+  LFN+AQCD+LP          +EE     L   ++ 
Sbjct  120  HGELLRDEHGEVVMTEVPMIKANPLFNIAQCDDLPAHFYENRRLPGEETAGITLPATHR-  178

Query  180  QVLSVLNATGVVCTSYRQNRAYYQPSTDRIVMPTTSQFNSEADYWSTLLHELVHATGHSR  239
             VL +LNA+GV  TS  QNRAYY PS DRIVMP +SQF+ +ADY +TLLHELVH+TGH+ 
Sbjct  179  -VLDILNASGVKVTSAAQNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPS  237

Query  240  RLSREGITSSSRKFGDPVYAFEELIAETGSAFLCAELGIYGDVQHESYLASWLKVLRDDK  299
            RL+REGITSSS KFGDP+Y+FEEL+AE GSAFLCA+L++ G+V+HESYL SWL+VL+ DK
Sbjct  238  RLAREGITSSSLKFGDPLYSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDK  297

Query  300  KaffracrfarEASEFLLQ  318
            KA+FRA   AR+A EFLL+
Sbjct  298  KALFRAAGQARQACEFLLN  316

8) EbC_pEb10200880 in NC_014304


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  290 bits (1084),  Expect = 1e-79, Method: Compositional matrix adjust.
 Identities = 169/306 (56%), Positives = 230/306 (76%), Gaps = 4/306 (1%)

Query  17   DLYQKVTDRIVEALEKGVAPWKKPWRTAGRCAAAGPLPVNALTGKPYSGVNVLLLWLAAE  76
            D+YQ VTDRIV ALEKG  PWK+PWR +   +++  +PVNALTG +Y G+NVLLLWL+A 
Sbjct  18   DIYQEVTDRIVAALEKGTRPWKRPWRPSE--GTGTGFPVNALTGHSYQGINVLLLWLSAA  75

Query  77   EKGYSTDRWVTYRQAQEMGGQVRKGETSSEAIIFKPFEKQAEDLSGNKLFDADGKPLMES  136
            E+G++ D W+TYRQAQ++GG+VRKGE +++++IFKP    A D  G+ L D +G  +M  
Sbjct  76   EQGFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHGELLRDEHGEVVMTE  135

Query  137  RAMIKPNFLFNVEQCDGLPEGVAAVPHESPVTEYPGTLDWPTEKRICEIVHLAGVKVEFK  196
             +MIK+N LFN+ QCD+LP       + +   E  + +  P+  R+ +I++ +GVKV   
Sbjct  136  VPMIKANPLFNIAQCDDLPAHFYENRRLP--GEETAGITLPATHRVLDILNASGVKVTSA  193

Query  197  LQNRAYYARRTDSILMPVADQFFTHADYFSTMLHEVVHATGHESRLNREGITKTSKKFGD  256
             QNRAYY+   D I+MP++ QF  +ADY +T+LHE+VH+TGH SRL REGIT +S KFGD
Sbjct  194  AQNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLAREGITSSSLKFGD  253

Query  257  PVYAFEELIAEMGSAFLCAQLGVFGDVQHDSYIKSWLEVLKSDKKALFRACRQAREASEF  316
            P+Y+FEEL+AEMGSAFLCAQL+V G+V+H+SY+ SWL VLKSDKKALFRA  QAR+A EF
Sbjct  254  PLYSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDKKALFRAAGQARQACEF  313

Query  317  LLQLTD  322
            LL+++ 
Sbjct  314  LLNVAA  319

9) YPZ3_0333 in NC_014029


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  290 bits (1084),  Expect = 1e-79, Method: Compositional matrix adjust.
 Identities = 172/322 (54%), Positives = 234/322 (73%), Gaps = 6/322 (1%)

Query  1    MKKTSPSRRPAKARRERPDLYQQVTDSIIGAIERGTLPWRKPWRTDRNRIYTGSVMPQNG  60
            MKK+   RRPA  +  R D+YQ+VTD I++A+E+GT PW++PWR       TG+  P N+
Sbjct  1    MKKSDRKRRPAADKPVR-DIYQEVTDRIVAALEKGTRPWKRPWRPSEG---TGTGFPVNA  56

Query  61   TTGYHYSGVNVLLLWIAAEERGFHSNRWLTYKQAEAVGGHVRAGETATLAVVFKPWDKQV  120
             TG  Y G+NVLLLW++A E+GF  + WLTY+QA+ +GGHVR GE AT +V+FKP     
Sbjct  57   LTGHSYQGINVLLLWLSAAEQGFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPA  116

Query  121  EDADGRQLFDEEGKPLKTRIPMLKPLYLFNVAQCDNLPETVVGVMPAAEPEEDGASVDAK  180
             D +G  L DE+G  + T +PM+K+  LFN+AQCD+LP           P E+ A++   
Sbjct  117  KDRHGELLRDEHGEVVMTEVPMIKANPLFNIAQCDDLPAHFYENRRL--PGEETAGITLP  174

Query  181  TQAQVNTLVEACGVRVEQVYQDRAFYSPLRDQIVLPQAQQFRTEADYWSTLLHELVHSTG  240
            +  +V  +++A GV+V    Q+RA+YSP +D+IV+P + QF  +ADY +TLLHELVHSTG
Sbjct  175  ATHRVLDILNASGVKVTSAAQNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTG  234

Query  241  HAKRLNREGITSSSRAFGDPIYAFEELVAELGSAFMCAQLGVFGDIQHDSYLEHWLRVLR  300
            H+ RL REGITSSS  FGDP+Y+FEELVAE+GSAF+CAQL+V G+++H+SYL+ WLRVL+
Sbjct  235  HPSRLAREGITSSSLKFGDPLYSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLK  294

Query  301  EDKRALFRAAKQAREASEFLLK  322
             DK+ALFRAA QAR+A EFLL+
Sbjct  295  SDKKALFRAAGQARQACEFLLN  316

10) YpsIP31758_3690 in NC_009708


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  290 bits (1087),  Expect = 6e-80, Method: Compositional matrix adjust.
 Identities = 172/326 (53%), Positives = 238/326 (74%), Gaps = 6/326 (1%)

Query  1    MKKSTSCRK--AHKRA-DLYQQVTDKIIVALEKGTIPWRKPWRSVRKPEGSSLPTNALTG  57
            MKKS   R+  A+K   D+YQ+VTD+I+ ALEKGT PW++PWR+     G+++P NALTG
Sbjct  1    MKKSDRKRRPAADKPVRDIYQEVTDRIVAALEKGTRPWKRPWRP-SEGTGTGFPVNALTG  59

Query  58   RPYQGVNIPLLWMAGEERGFGSDRWLTYRQAQKAGGQVRKGESCSLAVIFKPFEKQAEDE  117
            ++YQG+N+ LLW+++ E+GFG D WLTYRQAQ+ GG+VRKGE  + +VIFKP    A D 
Sbjct  60   HSYQGINVLLLWLSAAEQGFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDR  119

Query  118  QGNKLFDGAGKPLMKRCSMMKSLQLFNTDQCEGLPELMATQPVQLMVQDEIEILSAPLMN  177
            +G+ L D  G  +M   +M+K+  LFN  QC++LP     +  + +  +E   ++ P  +
Sbjct  120  HGELLRDEHGEVVMTEVPMIKANPLFNIAQCDDLPAHFYEN--RRLPGEETAGITLPATH  177

Query  178  RVVEILNHSGVKTTPRRQNRAFYRPLTDEIIMPLVGQFFTEADYWSTLLHELIHASGHQK  237
            RV++ILN SGVK T+  QNRA+Y P  D I+MPL +QF  +ADY +TLLHEL+H++GH  
Sbjct  178  RVLDILNASGVKVTSAAQNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPS  237

Query  238  RLNREGITSSTRTFGDPIYAFEELIAELGSAFLCAELGIYGEVQHESYISGWLKRLRKDK  297
            RL REGITSS+  FGDP+Y+FEEL+AE+GSAFLCA+L++ GEV+HESY+ +WL+ L+ DK
Sbjct  238  RLAREGITSSSLKFGDPLYSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDK  297

Query  298  KALFRACRQARQASEFLLTQQIGNDG  323
            KALFRA  QARQA EFLL    + ++
Sbjct  298  KALFRAAGQARQACEFLLNVAASRQA  323

11) M621_21510 in NC_021659


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  290 bits (1085),  Expect = 9e-80, Method: Compositional matrix adjust.
 Identities = 173/321 (54%), Positives = 234/321 (73%), Gaps = 5/321 (1%)

Query  1    MKKTSSSRRPAKARRERTDLYQQVTDKIIAAIETGTLPWRKPWRTDKGRGASTAIMPQNG  60
            MKK+   RRPA  +  R D+YQ+VTD+I+AA+E GT PW++PWR   G G++    P N+
Sbjct  1    MKKSDRKRRPAADKPVR-DIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTG---FPVNA  56

Query  61   TTGYHYSGVNVLLLWMAADERGFHSNRWLTYKQAEAVGGYVRAGETATLAVVFKPWDKQV  120
             TG  Y G+NVLLLW++A E+GF  + WLTY+QA+ +GG VR GE AT +V+FKP     
Sbjct  57   LTGHSYQGINVLLLWLSAAEQGFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPA  116

Query  121  EDADGRQLFDEEGNPLKMRIPMLKPLYLFNVAQCDDLPEVVGITPAEEPEEEGALVDAKT  180
             D +G  L DE+G+ +   +PM+K+  LFN+AQCDDLP          P EE A +   +
Sbjct  117  KDRHGELLRDEHGEVVMTEVPMIKANPLFNIAQCDDLPAHF-YENRRLPGEETAGITLPA  175

Query  181  QAQVSTLVDACGVRVEQVYQDRAYYAPGRDQIVLPQVQQFRTEADYWSTLLHELVHSTGH  240
              +V  +++A GV+V    Q+RAYY+P++D+IV+P   QF  +ADY +TLLHELVHSTGH
Sbjct  176  THRVLDILNASGVKVTSAAQNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGH  235

Query  241  ATRLNREGITSSSRAFGDPVYAFEELVAELGSAFMCAQLGVFGDIQHDSYLEHWLRVLRE  300
            ++RL REGITSSS  FGDP+Y+FEELVAE+GSAF+CAQL+V G+++H+SYL+ WLRVL+ 
Sbjct  236  PSRLAREGITSSSLKFGDPLYSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKS  295

Query  301  DKRALFRAAKQAREASEFLLK  321
            DK+ALFRAA QAR+A EFLL+
Sbjct  296  DKKALFRAAGQARQACEFLLN  316

12) ECL_00512 in NC_014121


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  289 bits (1083),  Expect = 1e-79, Method: Compositional matrix adjust.
 Identities = 166/320 (52%), Positives = 239/320 (75%), Gaps = 7/320 (2%)

Query  1    MKITTGRRKPAAVQ-TPDLYQQVTDKIILALENGVPPWRRPWRSAQNVHGGSLPVNAVTG  59
            MK +  +R+PAA +   D+YQ+VTD+I+ ALE+G  PW+RPWR+++   G ++PVNA+TG
Sbjct  1    MKKSDRKRRPAADKPVRDIYQEVTDRIVAALEKGTRPWKRPWRPSEGT-GTGFPVNALTG  59

Query  60   RAYSGINVPLLWMAAEEHGYTSDRWLTFRQAKAVGGYVRKNETSALAIIYKPFEKQARDS  119
            ++Y GINV LLW++A E+G+  D WLT+RQA+ +GG VRK E ++ ++I+KP    A+D 
Sbjct  60   HSYQGINVLLLWLSAAEQGFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDR  119

Query  120  SDNLLYRD--GEPVMEQLAMLKQLQLFNVAQCDGLPESVQGEQPNTVEAEPPSELSAAQL  177
             ++LL RD  GE VM +++M+K   LFN+AQCD+LP     ++    E  +   L+A++ 
Sbjct  120  HGELL-RDEHGEVVMTEVPMIKANPLFNIAQCDDLPAHFYENRRLPGEETAGITLPATH-  177

Query  178  QQVQQILSTTGVGCDHRRQDRAFYRPGADRIVMPTASQFRTEADYWSTLLHELVHATGHS  237
             +V +IL+++GV      Q+RA+Y P+ DRIVMP +SQF  +ADY +TLLHELVH+TGH+
Sbjct  178  -RVLDILNASGVKVTSAAQNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHP  236

Query  238  SRLNREGITSSSRKFGDPVYAFEELIAETGSAFLCVELGITGDVQHESYLAGWLKALRED  297
            SRL REGITSSS KFGDP+Y+FEEL+AE GSAFLC +L++ G+V+HESYL +WL+ L+ D
Sbjct  237  SRLAREGITSSSLKFGDPLYSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSD  296

Query  298  KRAIFRACRFAREASEYLLA  317
            K+A+FRA   AR+A E+LL 
Sbjct  297  KKALFRAAGQARQACEFLLN  316

13) PAJ_2514 in NC_017531


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  288 bits (1080),  Expect = 2e-79, Method: Compositional matrix adjust.
 Identities = 170/319 (54%), Positives = 240/319 (76%), Gaps = 6/319 (1%)

Query  1    MKKKTAGRKATTEQQT-DLYQQVTDKIIIALENGVPPWRRPWRSAQKVYGSGLPVNAVTG  59
            MKK    R++++++   D+YQ+VTD+I+ ALE+G  PW+RPWR+++   G+G+PVNA+TG
Sbjct  1    MKKSDRKRRPAADKPVRDIYQEVTDRIVAALEKGTRPWKRPWRPSEGT-GTGFPVNALTG  59

Query  60   RHYSGVNVPLLWMAAEEAGYGADRWLTFQQAKAAGGQVRKGERSSMAIIFKPFEKQLRDG  119
            + Y G+NV LLW++A E G+G D WLT++QA+  GG+VRKGE ++ ++IFKP     +D 
Sbjct  60   HSYQGINVLLLWLSAAEQGFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKD-  118

Query  120  NDSPVFRD--GVPVMEKLAMMKPLQLFNVAQCEGLPDKVYAPTMMQPETPPEGFSTGQQQ  177
             ++ ++RD  G  VM  ++M+K+  LFN+AQC++LP   Y    + P     G++    +
Sbjct  119  RHGELLRDEHGEVVMTEVPMIKANPLFNIAQCDDLPAHFYENRRL-PGEETAGITLPATH  177

Query  178  QVLEILNATGVKCSSHRQNRAYYSPGADRIVLPTTSQFRSPEDYLSTLLHELVHATGHRS  237
            +VL+ILNA+GVK +S  QNRAYYSP+ DRIV+P +SQF    DY +TLLHELVH+TGH S
Sbjct  178  RVLDILNASGVKVTSAAQNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPS  237

Query  238  RLDREGITSSSREFGDPVYAFEELIAETGSAFLCAHLGIFGEVQHESYLSGWLSVLRNDK  297
            RL REGITSSS  FGDP+Y+FEEL+AE GSAFLCA+L++ GEV+HESYL +WL VL++DK
Sbjct  238  RLAREGITSSSLKFGDPLYSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDK  297

Query  298  KaffracrfarEASEYLLK  316
            KA+FRA   AR+A E+LL+
Sbjct  298  KALFRAAGQARQACEFLLN  316

14) Spro_4123 in NC_009832


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  288 bits (1079),  Expect = 3e-79, Method: Compositional matrix adjust.
 Identities = 168/321 (53%), Positives = 234/321 (73%), Gaps = 5/321 (1%)

Query  1    MKKTSSRRLAKARRERPDLYQQVTDKIIAAIETGTLPWRKPWRTDKARDASTAIMPQNGT  60
            MKK+  +R + A +   D+YQ+VTD+I+AA+E GT PW++PWR     +++ +  P N+ 
Sbjct  1    MKKSDRKRRPAADKPVRDIYQEVTDRIVAALEKGTRPWKRPWRPS---EGTGTGFPVNAL  57

Query  61   TGYCYSGVNVLLLWMAADEGGFHSNRWLTYKQAEAVGGHVRAGETATLAVVFKPWDKQVE  120
            TG  Y G+NVLLLW++A E GF  + WLTY+QA+ +GGHVR GE AT +V+FKP      
Sbjct  58   TGHSYQGINVLLLWLSAAEQGFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAK  117

Query  121  DADGQQLFDEDGNPLKTRIPMLKPLYLFNVAQCDNLPETVVGITPAEEQEADGALVDAKT  180
            D +G+ L DE+G+ + T +PM+K+  LFN+AQCD+LP           +E+ G  +   +
Sbjct  118  DRHGELLRDEHGEVVMTEVPMIKANPLFNIAQCDDLPAHFYENRRLPGEETAG--ITLPA  175

Query  181  QARVNTLVDACGVRLEQVYQNRAFYSPIRDQIVLPQVQQFRTEADYWSTLLHELVHSTGH  240
              RV  +++A GV++    QNRA+YSP +D+IV+P   QF  +ADY +TLLHELVHSTGH
Sbjct  176  THRVLDILNASGVKVTSAAQNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGH  235

Query  241  ATRLNREGITSSSRAFGDPVYAFEELVAELGSAFMCAQLGVFGDVQHDSYLEHWLKVLRE  300
            ++RL REGITSSS  FGDP+Y+FEELVAE+GSAF+CAQL+V G+V+H+SYL+ WL+VL+ 
Sbjct  236  PSRLAREGITSSSLKFGDPLYSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKS  295

Query  301  DKRALFRAAKQAREASEFLLK  321
            DK+ALFRAA QAR+A EFLL+
Sbjct  296  DKKALFRAAGQARQACEFLLN  316

15) ardC in NC_016816


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  287 bits (1076),  Expect = 5e-79, Method: Compositional matrix adjust.
 Identities = 170/319 (54%), Positives = 243/319 (77%), Gaps = 6/319 (1%)

Query  1    MKKKTTGRKATAEQQT-DLYQQVTDKIIIALENGVPPWRRPWRSAQKVYGSGLPVNAVTG  59
            MKK    R+++A++   D+YQ+VTD+I+ ALE+G  PW+RPWR+++   G+G+PVNA+TG
Sbjct  1    MKKSDRKRRPAADKPVRDIYQEVTDRIVAALEKGTRPWKRPWRPSEGT-GTGFPVNALTG  59

Query  60   RHYSGVNVPLLWMAAEEAGYGADRWLTFQQAKAAGGQVRKGERSSMAIIFKPFEKQLRDG  119
            + Y G+NV LLW++A E G+G D WLT++QA+  GG+VRKGE ++ ++IFKP     +D 
Sbjct  60   HSYQGINVLLLWLSAAEQGFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKD-  118

Query  120  NDSPVFRD--GVPVMEKLAMMKPLQLFNVAQCEGLPDKVYAPTIKQPDTDPEGFSTGQQQ  177
             ++ ++RD  G  VM  ++M+K+  LFN+AQC++LP   Y    + P+ +  G++    +
Sbjct  119  RHGELLRDEHGEVVMTEVPMIKANPLFNIAQCDDLPAHFYENR-RLPGEETAGITLPATH  177

Query  178  QVLEILNATGVKCSSHRQNRAYYSPGADRIVLPTTPQFRSPEDYWSTLLHELVHATGHRS  237
            +VL+ILNA+GVK +S  QNRAYYSP+ DRIV+P ++QF    DY +TLLHELVH+TGH S
Sbjct  178  RVLDILNASGVKVTSAAQNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPS  237

Query  238  RLDREGITSSSREFGDPVYAFEELIAETGSAFLCAHLGIFGEVQHESYLNGWLSVLRNDK  297
            RL REGITSSS  FGDP+Y+FEEL+AE GSAFLCA+L++ GEV+HESYL++WL VL++DK
Sbjct  238  RLAREGITSSSLKFGDPLYSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDK  297

Query  298  KaffracrfarEATEYLLK  316
            KA+FRA   AR+A E+LL+
Sbjct  298  KALFRAAGQARQACEFLLN  316

16) YE3460 in NC_008800


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  287 bits (1073),  Expect = 8e-79, Method: Compositional matrix adjust.
 Identities = 175/323 (55%), Positives = 242/323 (75%), Gaps = 6/323 (1%)

Query  1    MKKSTSRRK--AQKRA-DLYQQVTDKIIAALEKGTVPWRKPWRLAARPVGSSLPTNASTG  57
            MKKS  +R+  A+K   D+YQ+VTD+I+AALEKGT PW++PWR ++   G+++P NA TG
Sbjct  1    MKKSDRKRRPAADKPVRDIYQEVTDRIVAALEKGTRPWKRPWR-PSEGTGTGFPVNALTG  59

Query  58   RPYSGVNVPLLWMASEEYGFSSDRWLTFKQAQQAGGRVKKGETSHLAVIFKLFEKQAEDL  117
            ++Y G+NV LLW+++ E GF+ D WLT++QAQQ GG+V+KGE +  +VIFK     A D 
Sbjct  60   HSYQGINVLLLWLSAAEQGFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDR  119

Query  118  DGNKLFDEQGKPRIEHLSMMKSLQLFNTEQCEGLPECMASSPARLIDQNDNEILSAPLMN  177
            +G+ L DE+G   + +++M+K+  LFN  QC++LP     +  RL +++   I + P  +
Sbjct  120  HGELLRDEHGEVVMTEVPMIKANPLFNIAQCDDLPAHFYENR-RLPGEETAGI-TLPATH  177

Query  178  RVLEILNSSGVTTTPRRQNRAFYRPLTDEIVMPLAGQFFTEADYWSTLLHELIHASGHEK  237
            RVL+ILN+SGV  T+  QNRA+Y P  D IVMPL++QF  +ADY +TLLHEL+H++GH  
Sbjct  178  RVLDILNASGVKVTSAAQNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPS  237

Query  238  RLNREGITSSTRTFGDPIYAFEELIAELGSAFLCAELGIYGEVQHESYINSWLKRLKKDK  297
            RL REGITSS+  FGDP+Y+FEEL+AE+GSAFLCA+L++ GEV+HESY++SWL+ LK DK
Sbjct  238  RLAREGITSSSLKFGDPLYSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDK  297

Query  298  KALFRACRQARQASEFLLTQQAS  320
            KALFRA  QARQA EFLL   AS
Sbjct  298  KALFRAAGQARQACEFLLNVAAS  320

17) PAGR_g3827 in NC_017554


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  286 bits (1070),  Expect = 1e-78, Method: Compositional matrix adjust.
 Identities = 170/319 (54%), Positives = 240/319 (76%), Gaps = 6/319 (1%)

Query  1    MKKKTSGRKATTEQQT-DFYQQVTDKIIIALENGVPPWRRPWRSAQKVYGSGLPVNAVTG  59
            MKK    R++++++   D+YQ+VTD+I+ ALE+G  PW+RPWR+++   G+G+PVNA+TG
Sbjct  1    MKKSDRKRRPAADKPVRDIYQEVTDRIVAALEKGTRPWKRPWRPSEGT-GTGFPVNALTG  59

Query  60   RHYSGVNVPLLWMAAEEAGYGADRWLTFQQAKAAGGQVRKGERSSMAIIFKPFEKQLRDG  119
            + Y G+NV LLW++A E G+G D WLT++QA+  GG+VRKGE ++ ++IFKP     +D 
Sbjct  60   HSYQGINVLLLWLSAAEQGFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKD-  118

Query  120  NDSPVFRD--GVPVMEKLAMMKPLQLFNVAQCEGLPDKVYAPTMMQPETPPEGFSTGQQQ  177
             ++ ++RD  G  VM  ++M+K+  LFN+AQC++LP   Y    + P     G++    +
Sbjct  119  RHGELLRDEHGEVVMTEVPMIKANPLFNIAQCDDLPAHFYENRRL-PGEETAGITLPATH  177

Query  178  QVLEILNATGVKCSSHRQNRAYYSPGADRIVLPTTSQFRSPEDYWSTLLHELVHATGHRS  237
            +VL+ILNA+GVK +S  QNRAYYSP+ DRIV+P +SQF    DY +TLLHELVH+TGH S
Sbjct  178  RVLDILNASGVKVTSAAQNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPS  237

Query  238  RLDREGITSSSREFGDPVYAFEELIAETGSAFLCAHLGIFGEVQHESYLSGWLSVLRNDK  297
            RL REGITSSS  FGDP+Y+FEEL+AE GSAFLCA+L++ GEV+HESYL +WL VL++DK
Sbjct  238  RLAREGITSSSLKFGDPLYSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDK  297

Query  298  KaffracrfarEASEYLLK  316
            KA+FRA   AR+A E+LL+
Sbjct  298  KALFRAAGQARQACEFLLN  316

18) SerAS12_0327 in NC_015566


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  285 bits (1066),  Expect = 3e-78, Method: Compositional matrix adjust.
 Identities = 167/321 (53%), Positives = 232/321 (73%), Gaps = 5/321 (1%)

Query  1    MKKTSSRRPAKARRERPDLYQQVTDKIIAAIETGTLPWRKPWRTDKARSASTAIMPQNGT  60
            MKK+  +R + A +   D+YQ+VTD+I+AA+E GT PW++PWR   + +++    P N+ 
Sbjct  1    MKKSDRKRRPAADKPVRDIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTG---FPVNAL  57

Query  61   TGYHYSGVNVLLLWMAADERGFHSNRWLTYKQAEAVGGHVRAGETATLAVVFKPWDKQVE  120
            TG  Y G+NVLLLW++A E+GF  + WLTY+QA+ +GGHVR GE AT +V+FKP      
Sbjct  58   TGHSYQGINVLLLWLSAAEQGFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAK  117

Query  121  DADGRQLFDEEGNPLKMRIPMLKPLYLFNVAQCDNLPETVVGTTPAEEPEEDGALVDAKT  180
            D +G  L DE+G+ +   +PM+K+  LFN+AQCD+LP           P E+ A +   +
Sbjct  118  DRHGELLRDEHGEVVMTEVPMIKANPLFNIAQCDDLPAHFYENRRL--PGEETAGITLPA  175

Query  181  QAQVSALVDACGVRFEQVYQDRAFYSPIRDQIVLPQVQQFRTEADYWSTLLHELVHSTGH  240
              +V  +++A GV+     Q+RA+YSP +D+IV+P   QF  +ADY +TLLHELVHSTGH
Sbjct  176  THRVLDILNASGVKVTSAAQNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGH  235

Query  241  ATRLNREGITSSSRAFGDPVYAFEELVAELGSAFMCAQLGVFGDVQHDSYLEHWLRVLRE  300
            ++RL REGITSSS  FGDP+Y+FEELVAE+GSAF+CAQL+V G+V+H+SYL+ WLRVL+ 
Sbjct  236  PSRLAREGITSSSLKFGDPLYSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKS  295

Query  301  DKRALFRAAKQAREASEFLLK  321
            DK+ALFRAA QAR+A EFLL+
Sbjct  296  DKKALFRAAGQARQACEFLLN  316

19) SerAS13_0326 in NC_017573


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  285 bits (1066),  Expect = 3e-78, Method: Compositional matrix adjust.
 Identities = 167/321 (53%), Positives = 232/321 (73%), Gaps = 5/321 (1%)

Query  1    MKKTSSRRPAKARRERPDLYQQVTDKIIAAIETGTLPWRKPWRTDKARSASTAIMPQNGT  60
            MKK+  +R + A +   D+YQ+VTD+I+AA+E GT PW++PWR   + +++    P N+ 
Sbjct  1    MKKSDRKRRPAADKPVRDIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTG---FPVNAL  57

Query  61   TGYHYSGVNVLLLWMAADERGFHSNRWLTYKQAEAVGGHVRAGETATLAVVFKPWDKQVE  120
            TG  Y G+NVLLLW++A E+GF  + WLTY+QA+ +GGHVR GE AT +V+FKP      
Sbjct  58   TGHSYQGINVLLLWLSAAEQGFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAK  117

Query  121  DADGRQLFDEEGNPLKMRIPMLKPLYLFNVAQCDNLPETVVGTTPAEEPEEDGALVDAKT  180
            D +G  L DE+G+ +   +PM+K+  LFN+AQCD+LP           P E+ A +   +
Sbjct  118  DRHGELLRDEHGEVVMTEVPMIKANPLFNIAQCDDLPAHFYENRRL--PGEETAGITLPA  175

Query  181  QAQVSALVDACGVRFEQVYQDRAFYSPIRDQIVLPQVQQFRTEADYWSTLLHELVHSTGH  240
              +V  +++A GV+     Q+RA+YSP +D+IV+P   QF  +ADY +TLLHELVHSTGH
Sbjct  176  THRVLDILNASGVKVTSAAQNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGH  235

Query  241  ATRLNREGITSSSRAFGDPVYAFEELVAELGSAFMCAQLGVFGDVQHDSYLEHWLRVLRE  300
            ++RL REGITSSS  FGDP+Y+FEELVAE+GSAF+CAQL+V G+V+H+SYL+ WLRVL+ 
Sbjct  236  PSRLAREGITSSSLKFGDPLYSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKS  295

Query  301  DKRALFRAAKQAREASEFLLK  321
            DK+ALFRAA QAR+A EFLL+
Sbjct  296  DKKALFRAAGQARQACEFLLN  316

20) SerAS9_0327 in NC_015567


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  285 bits (1066),  Expect = 3e-78, Method: Compositional matrix adjust.
 Identities = 167/321 (53%), Positives = 232/321 (73%), Gaps = 5/321 (1%)

Query  1    MKKTSSRRPAKARRERPDLYQQVTDKIIAAIETGTLPWRKPWRTDKARSASTAIMPQNGT  60
            MKK+  +R + A +   D+YQ+VTD+I+AA+E GT PW++PWR   + +++    P N+ 
Sbjct  1    MKKSDRKRRPAADKPVRDIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTG---FPVNAL  57

Query  61   TGYHYSGVNVLLLWMAADERGFHSNRWLTYKQAEAVGGHVRAGETATLAVVFKPWDKQVE  120
            TG  Y G+NVLLLW++A E+GF  + WLTY+QA+ +GGHVR GE AT +V+FKP      
Sbjct  58   TGHSYQGINVLLLWLSAAEQGFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAK  117

Query  121  DADGRQLFDEEGNPLKMRIPMLKPLYLFNVAQCDNLPETVVGTTPAEEPEEDGALVDAKT  180
            D +G  L DE+G+ +   +PM+K+  LFN+AQCD+LP           P E+ A +   +
Sbjct  118  DRHGELLRDEHGEVVMTEVPMIKANPLFNIAQCDDLPAHFYENRRL--PGEETAGITLPA  175

Query  181  QAQVSALVDACGVRFEQVYQDRAFYSPIRDQIVLPQVQQFRTEADYWSTLLHELVHSTGH  240
              +V  +++A GV+     Q+RA+YSP +D+IV+P   QF  +ADY +TLLHELVHSTGH
Sbjct  176  THRVLDILNASGVKVTSAAQNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGH  235

Query  241  ATRLNREGITSSSRAFGDPVYAFEELVAELGSAFMCAQLGVFGDVQHDSYLEHWLRVLRE  300
            ++RL REGITSSS  FGDP+Y+FEELVAE+GSAF+CAQL+V G+V+H+SYL+ WLRVL+ 
Sbjct  236  PSRLAREGITSSSLKFGDPLYSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKS  295

Query  301  DKRALFRAAKQAREASEFLLK  321
            DK+ALFRAA QAR+A EFLL+
Sbjct  296  DKKALFRAAGQARQACEFLLN  316

21) Spro_0395 in NC_009832


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  282 bits (1054),  Expect = 3e-77, Method: Compositional matrix adjust.
 Identities = 166/321 (52%), Positives = 234/321 (73%), Gaps = 5/321 (1%)

Query  10   MKKTSSRQPAKARRERPDLYQQVTDKIIAAIEMGTLPWRKPWRTDKARGASTAIMPQNGT  69
            MKK+  ++ + A +   D+YQ+VTD+I+AA+E GT PW++PWR   + G++    P N+ 
Sbjct  1    MKKSDRKRRPAADKPVRDIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTG---FPVNAL  57

Query  70   TGYHYSGVNVLLLWMAADERGFHSNRWLTYKQAEAVGGHVRAGETATLAVVFKPWDKQVE  129
            TG  Y G+NVLLLW++A E+GF  + WLTY+QA+ +GGHVR GE AT +V+FKP      
Sbjct  58   TGHSYQGINVLLLWLSAAEQGFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAK  117

Query  130  DADGRQLFDEDGNPLKTRIPMLKPLYLFNVAQCDNLPETVVGITPAEELDEDSALVDAKT  189
            D +G  L DE+G+ + T +PM+K+  LFN+AQCD+LP            +E++A +   +
Sbjct  118  DRHGELLRDEHGEVVMTEVPMIKANPLFNIAQCDDLPAHFYENRRLP--GEETAGITLPA  175

Query  190  QAQVNTLVDACGVRFEQVYQDRAFYSPIRDQIVLPQVRQFRTEADYWSTLLHELVHSTGH  249
              +V  +++A GV+     Q+RA+YSP +D+IV+P   QF  +ADY +TLLHELVHSTGH
Sbjct  176  THRVLDILNASGVKVTSAAQNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGH  235

Query  250  ATRLNREGITSSSRAFGDPVYAFEELVAELGSAFMCAQLGVFGDVQHDSYLEHWLKVLRE  309
            ++RL REGITSSS  FGDP+Y+FEELVAE+GSAF+CAQL+V G+V+H+SYL+ WL+VL+ 
Sbjct  236  PSRLAREGITSSSLKFGDPLYSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKS  295

Query  310  DKRALFRAAKQAREASEFLLK  330
            DK+ALFRAA QAR+A EFLL+
Sbjct  296  DKKALFRAAGQARQACEFLLN  316

22) CFSAN002050_21970 in NC_021818


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  281 bits (1053),  Expect = 3e-77, Method: Compositional matrix adjust.
 Identities = 178/329 (55%), Positives = 240/329 (73%), Gaps = 7/329 (2%)

Query  1    MKKTTSHK--AARRPAKHTDLYRQITDRIVVALENGVAPWRKPWRaaagiglaglplnaT  58
            MKK+   +  AA +P +  D+Y+++TDRIV ALE+G  PW++PWR++ G G +      T
Sbjct  1    MKKSDRKRRPAADKPVR--DIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTGFPVNALT  58

Query  59   TGRHYSGVNVLLLWMSAEEQGFRNNRWMTYRQAQQAGGQVRKGEKATLAVVYKDWTKQAE  118
             G+ Y G+NVLLLW+SA EQGF  + W+TYRQAQQ GG+VRKGE AT +V++K     A 
Sbjct  59   -GHSYQGINVLLLWLSAAEQGFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAK  117

Query  119  DREGNRLYDSDGKPLMETVPMLKPLQLFNAEQCEGLPAEVAASPEQPPTVDEDGILSPDV  178
            DR+G+ L D +G  +M  VPM+K+  LFN  QC++LPA+   +   P   +E + ++   
Sbjct  118  DRHGELLRDEHGEVVMTEVPMIKANPLFNIAQCDDLPAHFYENRRLPG--EETAGITLPA  175

Query  179  MNRVIRMFNATGVKHRMLPQNRAYYRPLTDEIVMPVAEQFFTEADCWSTLLHELVHSTGH  238
             +RV+ ++NA+GVK    +QNRAYY P  D IVMP++ QF  +AD  +TLLHELVHSTGH
Sbjct  176  THRVLDILNASGVKVTSAAQNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGH  235

Query  239  AKRLNREGITSSSRKFGDPVYAFEELIAEMGSAFLCAQLGVFGEVQHDSYVDHWLKVLKS  298
            + RL REGITSSS KFGDP+Y+FEEL+AEMGSAFLCAQL+V GEV+H+SY+D WL+VLKS
Sbjct  236  PSRLAREGITSSSLKFGDPLYSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKS  295

Query  299  DKKALFRACRHAREASEYLLALPESQAVA  327
            DKKALFRA  +AR+A E+LL ++ S+  A
Sbjct  296  DKKALFRAAGQARQACEFLLNVAASRQAA  324

23) ardC in NC_017390


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  279 bits (1044),  Expect = 2e-76, Method: Compositional matrix adjust.
 Identities = 169/319 (53%), Positives = 239/319 (75%), Gaps = 6/319 (1%)

Query  1    MKKTPRGRKAASTQRT-DLYQQVTDKIILALENGVPPWRRPWRSAQNVHGSALPVNATTG  59
            MKK+ R R++A+ +   D+YQ+VTD+I+ ALE+G  PW+RPWR+++   G+++PVNA TG
Sbjct  1    MKKSDRKRRPAADKPVRDIYQEVTDRIVAALEKGTRPWKRPWRPSEGT-GTGFPVNALTG  59

Query  60   RHYSGVNIPLLWMAAEEHGYTSDRWLTYQQAKTAGGQVRKGERSALAIIYKPFEKQARDN  119
            + Y G+N+ LLW++A E+G+  D WLTY+QA+  GG+VRKGE ++ ++I+KP    A+D 
Sbjct  60   HSYQGINVLLLWLSAAEQGFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDR  119

Query  120  SDNLLFRD--GEPVMEQLAMLRPLQLFNVAQCDGLPDTIRGGLREEAPENSAVLSAERLQ  177
             ++LL RD  GE VM +++M+++  LFN+AQCD+LP  +    R  + E++A ++    +
Sbjct  120  HGELL-RDEHGEVVMTEVPMIKANPLFNIAQCDDLPAHFYEN-RRLPGEETAGITLPATH  177

Query  178  RVQSIVNATGVSCAHYRQNRAYYQPLSDRIVMPTVAQFASEADYCSTLLHELVHASGHGK  237
            RV  I+NA+GV  +   QNRAYY P  DRIVMP  +QF  +ADY +TLLHELVH++GH  
Sbjct  178  RVLDILNASGVKVTSAAQNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPS  237

Query  238  RLNRVGITSSSRKFGDPVYAFEELIAETGSAFLCAELGVIGEVQHESYLASWLKALREDK  297
            RL R GITSSS KFGDP+Y+FEEL+AE GSAFLCA+L+V GEV+HESYL SWL+ L+ DK
Sbjct  238  RLAREGITSSSLKFGDPLYSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDK  297

Query  298  KaffracrfarEASEYLLQ  316
            KA+FRA   AR+A E+LL+
Sbjct  298  KALFRAAGQARQACEFLLN  316

24) ardC in NC_017390


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  279 bits (1044),  Expect = 2e-76, Method: Compositional matrix adjust.
 Identities = 169/319 (53%), Positives = 239/319 (75%), Gaps = 6/319 (1%)

Query  1    MKKTPRGRKAASTQRT-DLYQQVTDKIILALENGVPPWRRPWRSAQNVHGSALPVNATTG  59
            MKK+ R R++A+ +   D+YQ+VTD+I+ ALE+G  PW+RPWR+++   G+++PVNA TG
Sbjct  1    MKKSDRKRRPAADKPVRDIYQEVTDRIVAALEKGTRPWKRPWRPSEGT-GTGFPVNALTG  59

Query  60   RHYSGVNIPLLWMAAEEHGYTSDRWLTYQQAKTAGGQVRKGERSALAIIYKPFEKQARDN  119
            + Y G+N+ LLW++A E+G+  D WLTY+QA+  GG+VRKGE ++ ++I+KP    A+D 
Sbjct  60   HSYQGINVLLLWLSAAEQGFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDR  119

Query  120  SDNLLFRD--GEPVMEQLAMLRPLQLFNVAQCDGLPDTIRGGLREEAPENSAVLSAERLQ  177
             ++LL RD  GE VM +++M+++  LFN+AQCD+LP  +    R  + E++A ++    +
Sbjct  120  HGELL-RDEHGEVVMTEVPMIKANPLFNIAQCDDLPAHFYEN-RRLPGEETAGITLPATH  177

Query  178  RVQSIVNATGVSCAHYRQNRAYYQPLSDRIVMPTVAQFASEADYCSTLLHELVHASGHGK  237
            RV  I+NA+GV  +   QNRAYY P  DRIVMP  +QF  +ADY +TLLHELVH++GH  
Sbjct  178  RVLDILNASGVKVTSAAQNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPS  237

Query  238  RLNRVGITSSSRKFGDPVYAFEELIAETGSAFLCAELGVIGEVQHESYLASWLKALREDK  297
            RL R GITSSS KFGDP+Y+FEEL+AE GSAFLCA+L+V GEV+HESYL SWL+ L+ DK
Sbjct  238  RLAREGITSSSLKFGDPLYSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDK  297

Query  298  KaffracrfarEASEYLLQ  316
            KA+FRA   AR+A E+LL+
Sbjct  298  KALFRAAGQARQACEFLLN  316

25) EpC_04660 in NC_012214


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  279 bits (1044),  Expect = 2e-76, Method: Compositional matrix adjust.
 Identities = 169/319 (53%), Positives = 239/319 (75%), Gaps = 6/319 (1%)

Query  1    MKKTPRGRKAASTQRT-DLYQQVTDKIILALENGVPPWRRPWRSAQNVHGSALPVNATTG  59
            MKK+ R R++A+ +   D+YQ+VTD+I+ ALE+G  PW+RPWR+++   G+++PVNA TG
Sbjct  1    MKKSDRKRRPAADKPVRDIYQEVTDRIVAALEKGTRPWKRPWRPSEGT-GTGFPVNALTG  59

Query  60   RHYSGVNIPLLWMAAEEHGYTSDRWLTYQQAKTAGGQVRKGERSALAIIYKPFEKQARDN  119
            + Y G+N+ LLW++A E+G+  D WLTY+QA+  GG+VRKGE ++ ++I+KP    A+D 
Sbjct  60   HSYQGINVLLLWLSAAEQGFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDR  119

Query  120  SDNLLFRD--GEPVMEQLAMLRPLQLFNVAQCDGLPDTIRGGLREEAPENSAVLSAERLQ  177
             ++LL RD  GE VM +++M+++  LFN+AQCD+LP  +    R  + E++A ++    +
Sbjct  120  HGELL-RDEHGEVVMTEVPMIKANPLFNIAQCDDLPAHFYEN-RRLPGEETAGITLPATH  177

Query  178  RVQSIVNATGVSCAHYRQNRAYYQPLSDRIVMPTVAQFASEADYCSTLLHELVHASGHGK  237
            RV  I+NA+GV  +   QNRAYY P  DRIVMP  +QF  +ADY +TLLHELVH++GH  
Sbjct  178  RVLDILNASGVKVTSAAQNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPS  237

Query  238  RLNRVGITSSSRKFGDPVYAFEELIAETGSAFLCAELGVIGEVQHESYLASWLKALREDK  297
            RL R GITSSS KFGDP+Y+FEEL+AE GSAFLCA+L+V GEV+HESYL SWL+ L+ DK
Sbjct  238  RLAREGITSSSLKFGDPLYSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDK  297

Query  298  KaffracrfarEASEYLLQ  316
            KA+FRA   AR+A E+LL+
Sbjct  298  KALFRAAGQARQACEFLLN  316

26) EpC_30100 in NC_012214


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  279 bits (1044),  Expect = 2e-76, Method: Compositional matrix adjust.
 Identities = 169/319 (53%), Positives = 239/319 (75%), Gaps = 6/319 (1%)

Query  1    MKKTPRGRKAASTQRT-DLYQQVTDKIILALENGVPPWRRPWRSAQNVHGSALPVNATTG  59
            MKK+ R R++A+ +   D+YQ+VTD+I+ ALE+G  PW+RPWR+++   G+++PVNA TG
Sbjct  1    MKKSDRKRRPAADKPVRDIYQEVTDRIVAALEKGTRPWKRPWRPSEGT-GTGFPVNALTG  59

Query  60   RHYSGVNIPLLWMAAEEHGYTSDRWLTYQQAKTAGGQVRKGERSALAIIYKPFEKQARDN  119
            + Y G+N+ LLW++A E+G+  D WLTY+QA+  GG+VRKGE ++ ++I+KP    A+D 
Sbjct  60   HSYQGINVLLLWLSAAEQGFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDR  119

Query  120  SDNLLFRD--GEPVMEQLAMLRPLQLFNVAQCDGLPDTIRGGLREEAPENSAVLSAERLQ  177
             ++LL RD  GE VM +++M+++  LFN+AQCD+LP  +    R  + E++A ++    +
Sbjct  120  HGELL-RDEHGEVVMTEVPMIKANPLFNIAQCDDLPAHFYEN-RRLPGEETAGITLPATH  177

Query  178  RVQSIVNATGVSCAHYRQNRAYYQPLSDRIVMPTVAQFASEADYCSTLLHELVHASGHGK  237
            RV  I+NA+GV  +   QNRAYY P  DRIVMP  +QF  +ADY +TLLHELVH++GH  
Sbjct  178  RVLDILNASGVKVTSAAQNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPS  237

Query  238  RLNRVGITSSSRKFGDPVYAFEELIAETGSAFLCAELGVIGEVQHESYLASWLKALREDK  297
            RL R GITSSS KFGDP+Y+FEEL+AE GSAFLCA+L+V GEV+HESYL SWL+ L+ DK
Sbjct  238  RLAREGITSSSLKFGDPLYSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDK  297

Query  298  KaffracrfarEASEYLLQ  316
            KA+FRA   AR+A E+LL+
Sbjct  298  KALFRAAGQARQACEFLLN  316

27) EJP617_17250 in NC_017445


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  278 bits (1039),  Expect = 4e-76, Method: Compositional matrix adjust.
 Identities = 168/319 (53%), Positives = 239/319 (75%), Gaps = 6/319 (1%)

Query  1    MKKTTRGRKAASTQRT-DLYQQVTDKIILALENGVPPWRRPWRSAQNVHGSALPVNATTG  59
            MKK+ R R++A+ +   D+YQ+VTD+I+ ALE+G  PW+RPWR+++   G+++PVNA TG
Sbjct  1    MKKSDRKRRPAADKPVRDIYQEVTDRIVAALEKGTRPWKRPWRPSEGT-GTGFPVNALTG  59

Query  60   RHYSGVNIPLLWMAAEEHGYTSDRWLTYQQAKTAGGQVRKGERSALAIIYKPFEKQARDK  119
            + Y G+N+ LLW++A E+G+  D WLTY+QA+  GG+VRKGE ++ ++I+KP    A+D+
Sbjct  60   HSYQGINVLLLWLSAAEQGFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDR  119

Query  120  SDNLLFRD--GEPVMEQLAMLRPLQLFNVAQCYGLPDAIRGGLREEAPENSAVLSAERLQ  177
             ++LL RD  GE VM +++M+++  LFN+AQC +LP  +    R  + E++A ++    +
Sbjct  120  HGELL-RDEHGEVVMTEVPMIKANPLFNIAQCDDLPAHFYEN-RRLPGEETAGITLPATH  177

Query  178  RVHSIVNATGVTCGHYRQNRAYYQPLSDRIVMPTAAQFASEADYCSTLLHELVHASGHSK  237
            RV  I+NA+GV      QNRAYY P  DRIVMP ++QF  +ADY +TLLHELVH++GH+ 
Sbjct  178  RVLDILNASGVKVTSAAQNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPS  237

Query  238  RLNRVGITSSSRKFGDPVYAFEELIAETGSAFLCAELDVIGEVQHESYLASWLKALREDK  297
            RL R GITSSS KFGDP+Y+FEEL+AE GSAFLCA+L V GEV+HESYL SWL+ L+ DK
Sbjct  238  RLAREGITSSSLKFGDPLYSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDK  297

Query  298  KaffracrfarEASEYLLQ  316
            KA+FRA   AR+A E+LL+
Sbjct  298  KALFRAAGQARQACEFLLN  316

28) Spro_4058 in NC_009832


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  277 bits (1038),  Expect = 5e-76, Method: Compositional matrix adjust.
 Identities = 161/304 (53%), Positives = 227/304 (75%), Gaps = 5/304 (1%)

Query  19   DLYQQVTDKIIAAIETGTLPWRKPWRTDKARSASTSIMPQNGTTGYHYSGVNVLLLWMAA  78
            D+YQ+VTD+I+AA+E GT PW++PWR   + +++    P N+ TG  Y G+NVLLLW++A
Sbjct  18   DIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTG---FPVNALTGHSYQGINVLLLWLSA  74

Query  79   DERGFHSHRWLTYKQAEAVGGHVRAGETATLAVVFKSWDKQVEDADGRQLFDEEGNPLKT  138
             E+GF  + WLTY+QA+ +GGHVR GE AT +V+FK+      D +G  L DE+G+ + T
Sbjct  75   AEQGFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHGELLRDEHGEVVMT  134

Query  139  RIPMLKPLYLFNVAQCDNLPETVVGVTPAEVPEEEGALVDTKTQAQVSTLVDASGVRLEQ  198
             +PM+K+  LFN+AQCD+LP          +P EE A +   +  +V  +++ASGV++  
Sbjct  135  EVPMIKANPLFNIAQCDDLPAHFYENRR--LPGEETAGITLPATHRVLDILNASGVKVTS  192

Query  199  VYQDRAFYSPIRDQIVLPQVQQFRTEADYWSTLLHELVHSTGHATRLNREGITSSSRAFG  258
              Q+RA+YSP +D+IV+P   QF  +ADY +TLLHELVHSTGH++RL REGITSSS  FG
Sbjct  193  AAQNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLAREGITSSSLKFG  252

Query  259  DPVYAFEELVAELGSAFMCAQLGIFGDIQHDSYLEHWLKVLREDKRALFRAAKQAREASE  318
            DP+Y+FEELVAE+GSAF+CAQL++ G+++H+SYL+ WL+VL+ DK+ALFRAA QAR+A E
Sbjct  253  DPLYSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDKKALFRAAGQARQACE  312

Query  319  FLLK  322
            FLL+
Sbjct  313  FLLN  316

29) NT01EI_0363 in NC_012779


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  277 bits (1036),  Expect = 7e-76, Method: Compositional matrix adjust.
 Identities = 164/302 (55%), Positives = 227/302 (76%), Gaps = 3/302 (0%)

Query  41   DIYRLVTDRIIIALENGIPPWRRPWRNAQQGINTLMPANAFTGRGYSGVNVLLLWLAAEE  100
            DIY+ VTDRI+ ALE+G  PW+RPWR ++ G  T  P NA+TG++Y G+NVLLLWL+A E
Sbjct  18   DIYQEVTDRIVAALEKGTRPWKRPWRPSE-GTGTGFPVNALTGHSYQGINVLLLWLSAAE  76

Query  101  RGFTSDRWLTYNQAQEAGGQVRKGETATLAVIYRDWTKQAEDSNGNKLFDADGKPQMETV  160
            +GF  D WLTY QAQ+ GG+VRKGE AT +VI++     A D +G+ L D +G   M  V
Sbjct  77   QGFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHGELLRDEHGEVVMTEV  136

Query  161  PMLRQFPLFNAEQCADLPDQVRGTATVTRPQEDFADvspvqlqqvlsvvNATGVQFSPRP  220
            PM++  PLFN  QC DLP +      +  P E+ A+++    ++VL ++NA+GV+ ++ +
Sbjct  137  PMIKANPLFNIAQCDDLPAHFYENRRL--PGEETAGITLPATHRVLDILNASGVKVTSAA  194

Query  221  QNRAYYRVATDQIVLPLTSQFDAEGDYWSTVLHELVHASGHAKRLNREGITRASKKFGDP  280
            QNRAYY  + D+IV+PL+SQFD ++DY +T+LHELVH++GH+ RL REGIT +S KFGDP
Sbjct  195  QNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLAREGITSSSLKFGDP  254

Query  281  VYAFEELIAEIGSAFLCAHLGITGDLQHESYVDGWLSKLKSDKKALFSACRQAREASEYL  340
            +Y+FEEL+AE+GSAFLCA+L++ G+++HESY+D+WL  LKSDKKALF A  QAR+A E+L
Sbjct  255  LYSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDKKALFRAAGQARQACEFL  314

Query  341  LA  342
            L 
Sbjct  315  LN  316

30) EJP617_06360 in NC_017445


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  277 bits (1035),  Expect = 9e-76, Method: Compositional matrix adjust.
 Identities = 167/319 (53%), Positives = 238/319 (75%), Gaps = 6/319 (1%)

Query  1    MKKTTRGRKAASTQRT-DLYQQVTDKIILALENGVPPWRRPWRSAQNVHGSALPVNATTG  59
            MKK+ R R++A+ +   D+YQ+VTD+I+ ALE+G  PW+RPWR+++   G+++PVNA TG
Sbjct  1    MKKSDRKRRPAADKPVRDIYQEVTDRIVAALEKGTRPWKRPWRPSEGT-GTGFPVNALTG  59

Query  60   RHYSGVNIPLLWMAAEEHGYTSDRWLTYQQAKTAGGQVRKGERSALAIIYKPFEKQARDK  119
            + Y G+N+ LLW++A E+G+  D WLTY+QA+  GG+VRKGE ++ ++I+KP    A+D+
Sbjct  60   HSYQGINVLLLWLSAAEQGFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDR  119

Query  120  SDNLLFRD--GEPVMEQLAMLRPLQLFNVAQCYGLPDAIRGGLREEAPENGAVLSAERLQ  177
             ++LL RD  GE VM +++M+++  LFN+AQC +LP  +    R  + E +++  +   +
Sbjct  120  HGELL-RDEHGEVVMTEVPMIKANPLFNIAQCDDLPAHFYENRRLPGEETAGITLPAT-H  177

Query  178  RVQSIVNATGVSCAHYRQNRAYYQPLSDRIVMPTVAQFASEADYCSTLLHELVHASGHGK  237
            RV  I+NA+GV  +   QNRAYY P  DRIVMP  +QF  +ADY +TLLHELVH++GH  
Sbjct  178  RVLDILNASGVKVTSAAQNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPS  237

Query  238  RLNRVGITSSSRKFGDPVYAFEELIAETGSAFLCAELGVIGEVQHESYLASWLKALREDK  297
            RL R GITSSS KFGDP+Y+FEEL+AE GSAFLCA+L+V GEV+HESYL SWL+ L+ DK
Sbjct  238  RLAREGITSSSLKFGDPLYSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDK  297

Query  298  KaffracrfarEASEYLLQ  316
            KA+FRA   AR+A E+LL+
Sbjct  298  KALFRAAGQARQACEFLLN  316

31) UMN179_00348 in NC_015460


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  258 bits (963),  Expect = 4e-70, Method: Compositional matrix adjust.
 Identities = 143/312 (46%), Positives = 217/312 (70%), Gaps = 12/312 (3%)

Query  2    KNQQNASASHKIDVYQDVTDRIVQCLESGTRPWIKPW------VSGLPQNAISGRYYTGI  55
            ++++ A+     D+YQ+VTDRIV  LE GTRPW +PW       +G+P NA++G+ Y GI
Sbjct  6    RKRRPAADKPVRDIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTGFPVNALTGHSYQGI  65

Query  56   NVLLLMIASEEKGYQSTKWLTAKAANKLGGKIKKGEKATRIINYSPIEREKKDDNGDLIL  115
            NVLLL +++ E+G+    WLT + A++LGG ++KGE AT  + + P+    KD +G+L+ 
Sbjct  66   NVLLLWLSAAEQGFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHGELLR  125

Query  116  DSEGNPEMEKFAIIRAYPLFNIEQCEGLPEEMYLEKEMPSE------FQKVNEVHQILEG  169
            D +G+  M   ++I+A PLFNI QC++LP + Y ++ +P+E      +   + V +IL++
Sbjct  126  DEHGEVVMTEVPMIKANPLFNIAQCDDLPAHFYENRRLPGEETAGITLPATHRVLDILNA  185

Query  170  MGVAVKHTAGDQAYYSPLMDVINMPLMKTFCTERSYYSVLLHEMIHATGHKDRLEREGIT  229
             GV V  +A ++AYYSP  D I MPL   F  +  Y + LLHE++H+TGH  RL REGIT
Sbjct  186  SGVKVTSAAQNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLAREGIT  245

Query  230  SKKAKFGNEIYAFEELIAEMGSAFVCTALGFDTISNNASYIDSWIKVLKSDKKAIFRASG  289
            S   KFG+ +Y+FEEL+AEMGSAF+C+ L+ +   N+ SY+DSW++VLKSDKKA+FRA+G
Sbjct  246  SSSLKFGDPLYSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDKKALFRAAG  305

Query  290  EARKAAEYLFEI  301
            +AR+A E+L+++
Sbjct  306  QARQACEFLLNV  317

32) ST548_p5004 in NC_020181


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  257 bits (961),  Expect = 5e-70, Method: Compositional matrix adjust.
 Identities = 146/299 (49%), Positives = 212/299 (71%), Gaps = 11/299 (3%)

Query  6    DLYQKVTDEIIAALEKGVIPWVRPWREGEPVV---PMNALSGRFYHGINIPLLWNSAERQ  62
            D+YQ VTD I+AALEKG  PW RPWR +E      P+NAL+G+ Y+GIN+ LLW SA  Q
Sbjct  18   DIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTGFPVNALTGHSYQGINVLLLWLSAAEQ  77

Query  63   GYESDRWLTFTQIRNAGGNIRKGEKSTLAVFYLPQQREVVDSNGNTVLDADGNPKLTSYA  122
            G+  D WLT+ Q ++ GG++RKGE +T +V++ P +    D +G+ + D +G+  +T  +
Sbjct  78   GFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHGELLRDEHGEVVMTEVP  137

Query  123  VVREFRLFNIQQCEDLPEAFSQPVVMVDDPIAAAE--------QIARQSSVVITHRRQNR  174
            +++   LFNI QC+DLP  F +   + ++  A+          +I   S+V +T   QNR
Sbjct  138  MIKANPLFNIAQCDDLPAHFYENRRLPGEETAGITLPATHRVLDILNASGVKVTSAAQNR  197

Query  175  AYYSPGRDCIIMPHPEQFTSREDYYGTLLHELTHATGHASRLNRDGITAGKHTFGDPAYS  234
            AYYSP++D I+MP + QF    DY +TLLHEL H+TGH+SRL R+GIT++   FGDP YS
Sbjct  198  AYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLAREGITSSSLKFGDPLYS  257

Query  235  FEELVAEMGAAFLCAHVGIQSKLQHDSYIASWLKVLQQDKKAIFRASGLARNACEYLLE  293
            FEELVAEMG+AFLCA++++++ ++H+SY+ SWL+VL+ DKKA+FRA+G AR+ACE+LL+
Sbjct  258  FEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDKKALFRAAGQARQACEFLLN  316

33) SARI_03152 in NC_010067


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  256 bits (958),  Expect = 9e-70, Method: Compositional matrix adjust.
 Identities = 143/299 (48%), Positives = 212/299 (71%), Gaps = 11/299 (3%)

Query  6    DLYQKVTDEIIAALEKGVIPWVRPWREGEPVV---PMNALSGRFYHGINIPLLWNSAERQ  62
            D+YQ VTD I+AALEKG  PW RPWR +E      P+NAL+G+ Y+GIN+ LLW SA  Q
Sbjct  18   DIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTGFPVNALTGHSYQGINVLLLWLSAAEQ  77

Query  63   GYESDRWLTFTQIRNAGGNIRKGEKSTLAVFYLPQQREVVDSNGNTVLDADGNPKLTSYA  122
            G+  D WLT+ Q ++ GG++RKGE +T +V++ P +    D +G+ + D +G+  +T  +
Sbjct  78   GFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHGELLRDEHGEVVMTEVP  137

Query  123  VVREFRLFNIQQCEDLPEAFSQPVVMVDDPIAAAE--------QVARQSAVVITHRRQNR  174
            +++   LFNI QC+DLP  F +   + ++  A+          ++   S+V +T   QNR
Sbjct  138  MIKANPLFNIAQCDDLPAHFYENRRLPGEETAGITLPATHRVLDILNASGVKVTSAAQNR  197

Query  175  AYYSPGRDCIIMPHPEQFASREDYYGTLLHELTHATGHASRLNRDGITAGKHTFGDPTYS  234
            AYYSP++D I+MP + QF    DY +TLLHEL H+TGH+SRL R+GIT++   FGDP YS
Sbjct  198  AYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLAREGITSSSLKFGDPLYS  257

Query  235  FEELIAEMGAAFLCAHVGIQAKLQHDSYIASWLKVLQQNKKAIFRASGLARNACEYLLE  293
            FEEL+AEMG+AFLCA++++++ ++H+SY+ SWL+VL+ +KKA+FRA+G AR+ACE+LL+
Sbjct  258  FEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDKKALFRAAGQARQACEFLLN  316

34) traC in NC_013716


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  255 bits (952),  Expect = 2e-69, Method: Compositional matrix adjust.
 Identities = 143/297 (49%), Positives = 213/297 (72%), Gaps = 11/297 (3%)

Query  6    DLYQKVTDEIIAALEKGVIPWVRPWREGEPVV---PMNALSGRFYHGINIPLLWNSAERQ  62
            D+YQ VTD I+AALEKG  PW RPWR +E      P+NAL+G+ Y+GIN+ LLW SA  Q
Sbjct  18   DIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTGFPVNALTGHSYQGINVLLLWLSAAEQ  77

Query  63   GYESDRWLTFTQIRNAGGNIRKGEKSTLAVFYLPQQREVVDSNGNTVLDADGNPKVTSYA  122
            G+  D WLT+ Q ++ GG++RKGE +T +V++ P +    D +G+ + D +G+  +T  +
Sbjct  78   GFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHGELLRDEHGEVVMTEVP  137

Query  123  VVREFRLFNIQQCEGLPEEFLQPVVMVDDPIAAAE--------QVARQSAVVITHRRQNR  174
            +++   LFNI QC++LP +F +   + ++  A+          ++   S+V +T   QNR
Sbjct  138  MIKANPLFNIAQCDDLPAHFYENRRLPGEETAGITLPATHRVLDILNASGVKVTSAAQNR  197

Query  175  AYYSPGRDCIIMPHPEQFASREDYYGTLLHELTHATGHASRLSRDGITAGNHTFGDPAYS  234
            AYYSP++D I+MP + QF    DY +TLLHEL H+TGH+SRL+R+GIT+++  FGDP YS
Sbjct  198  AYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLAREGITSSSLKFGDPLYS  257

Query  235  FEELVAEMGSAFLCTHVGIQAKLQHDSYIASWLKVLQQDKKAIFRASGLARNACEYL  291
            FEELVAEMGSAFLC+++++++ ++H+SY+ SWL+VL+ DKKA+FRA+G AR+ACE+L
Sbjct  258  FEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDKKALFRAAGQARQACEFL  314

35) LF82_699 in NC_011993


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  255 bits (952),  Expect = 3e-69, Method: Compositional matrix adjust.
 Identities = 147/298 (50%), Positives = 215/298 (73%), Gaps = 14/298 (4%)

Query  1    MTKKTTNRKSA---PRQDLFQTVTDKIITALENGITPWRKAWQTGKE---GLPANAITGR  54
            M K   +R++A   P +D++Q VTD+I++ALE+G  PW+++W+ +     G+P NA+TG+
Sbjct  1    MKKSDRKRRPAADKPVRDIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTGFPVNALTGH  60

Query  55   NYSGINVMLLWIDAADKGFHSNRWLTFKQALDAGGNVRKGEKSTLVTLFKPFQKEATDNS  114
            +Y GINV+LLW+ AA++GF  + WLT++QA + GG+VRKGE +T   +FKP +  A D  
Sbjct  61   SYQGINVLLLWLSAAEQGFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRH  120

Query  115  GQPVFDDNGEVVMRDRCFMTSFHLFNVEQCENLPDNLYPEIPVLPDVERIA-------RA  167
            G+ + D++GEVVM +   + +  LFN+ QC++LP ++Y E   LP+ E  +       R 
Sbjct  121  GELLRDEHGEVVMTEVPMIKANPLFNIAQCDDLPAHFY-ENRRLPGEETAGITLPATHRV  179

Query  168  EQIATCSGVPVIHRYQDRAYYRPGVDHIMMPEAAQFDSAEDYYSTLLHELVHSTGHASRL  227
             +I   SGV V    Q+RAYY P+ D+I+MP ++QFD   DY +TLLHELVHSTGH+SRL
Sbjct  180  LDILNASGVKVTSAAQNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRL  239

Query  228  AREGIVSTSKKFGDPVYGFEELIAEMGAAFLCAELGIYGDLQHESYIASWLQTLKEDN  285
            AREGI S+S KFGDP+Y+FEEL+AEMG+AFLCA+L++ G+++HESY+ SWL+ LK D+
Sbjct  240  AREGITSSSLKFGDPLYSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDK  297

36) NRG857_21000 in NC_017634


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  255 bits (952),  Expect = 3e-69, Method: Compositional matrix adjust.
 Identities = 147/298 (50%), Positives = 215/298 (73%), Gaps = 14/298 (4%)

Query  1    MTKKTTNRKSA---PRQDLFQTVTDKIITALENGITPWRKAWQTGKE---GLPANAITGR  54
            M K   +R++A   P +D++Q VTD+I++ALE+G  PW+++W+ +     G+P NA+TG+
Sbjct  1    MKKSDRKRRPAADKPVRDIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTGFPVNALTGH  60

Query  55   NYSGINVMLLWIDAADKGFHSNRWLTFKQALDAGGNVRKGEKSTLVTLFKPFQKEATDNS  114
            +Y GINV+LLW+ AA++GF  + WLT++QA + GG+VRKGE +T   +FKP +  A D  
Sbjct  61   SYQGINVLLLWLSAAEQGFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRH  120

Query  115  GQPVFDDNGEVVMRDRCFMTSFHLFNVEQCENLPDNLYPEIPVLPDVERIA-------RA  167
            G+ + D++GEVVM +   + +  LFN+ QC++LP ++Y E   LP+ E  +       R 
Sbjct  121  GELLRDEHGEVVMTEVPMIKANPLFNIAQCDDLPAHFY-ENRRLPGEETAGITLPATHRV  179

Query  168  EQIATCSGVPVIHRYQDRAYYRPGVDHIMMPEAAQFDSAEDYYSTLLHELVHSTGHASRL  227
             +I   SGV V    Q+RAYY P+ D+I+MP ++QFD   DY +TLLHELVHSTGH+SRL
Sbjct  180  LDILNASGVKVTSAAQNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRL  239

Query  228  AREGIVSTSKKFGDPVYGFEELIAEMGAAFLCAELGIYGDLQHESYIASWLQTLKEDN  285
            AREGI S+S KFGDP+Y+FEEL+AEMG+AFLCA+L++ G+++HESY+ SWL+ LK D+
Sbjct  240  AREGITSSSLKFGDPLYSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDK  297

37) ECSF_4160 in NC_013654


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  253 bits (944),  Expect = 1e-68, Method: Compositional matrix adjust.
 Identities = 142/299 (48%), Positives = 211/299 (71%), Gaps = 11/299 (3%)

Query  6    DLYQKVTDEIIAALEKGVLPWVRPWREGEPVV---PMNALSGRFYHGINIPLLWNSAERQ  62
            D+YQ VTD I+AALEKG  PW RPWR +E      P+NAL+G+ Y+GIN+ LLW SA  Q
Sbjct  18   DIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTGFPVNALTGHSYQGINVLLLWLSAAEQ  77

Query  63   GYENDRWLTFTQIRNAGGNIHKGERSTLAVFYLPQQREVVDSNGNTVLDADGNPKVMSYA  122
            G+  D WLT+ Q ++ GG+++KGE +T +V++ P +    D +G+ + D +G+  +   +
Sbjct  78   GFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHGELLRDEHGEVVMTEVP  137

Query  123  VVREFRLFNIQQCEGLPEAFSQPVVMVDDPIAAAE--------QVTRQSAVMITHRRQNR  174
            +++   LFNI QC++LP  F +   + ++  A+          ++   S+V +T   QNR
Sbjct  138  MIKANPLFNIAQCDDLPAHFYENRRLPGEETAGITLPATHRVLDILNASGVKVTSAAQNR  197

Query  175  AYYSPGRDCIIMPHPEQFTSREDYYGTLLHELTHATGHASRLNRDGITAGKHTFGDPTYS  234
            AYYSP++D I+MP + QF    DY +TLLHEL H+TGH+SRL R+GIT++   FGDP YS
Sbjct  198  AYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLAREGITSSSLKFGDPLYS  257

Query  235  FEELVAEMGAAFLCAHVGIQSKLQHDSYIASWLKVLQQDKKAIFRASGLARNACEYLLE  293
            FEELVAEMG+AFLCA++++++ ++H+SY+ SWL+VL+ DKKA+FRA+G AR+ACE+LL+
Sbjct  258  FEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDKKALFRAAGQARQACEFLLN  316

38) O3M_22175 in NC_018650


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  252 bits (943),  Expect = 2e-68, Method: Compositional matrix adjust.
 Identities = 142/299 (48%), Positives = 211/299 (71%), Gaps = 11/299 (3%)

Query  6    DLYQKVTDEIIAALEKGVLPWVRPWREGEPVV---PMNALSGRFYHGINIPLLWNSAERQ  62
            D+YQ VTD I+AALEKG  PW RPWR +E      P+NAL+G+ Y+GIN+ LLW SA  Q
Sbjct  18   DIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTGFPVNALTGHSYQGINVLLLWLSAAEQ  77

Query  63   GYENDRWLTFTQIRNAGGNIHKGERSTLAVFYLPQQREVVDSNGNTVLDADGNPKVMSYA  122
            G+  D WLT+ Q ++ GG+++KGE +T +V++ P +    D +G+ + D +G+  +   +
Sbjct  78   GFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHGELLRDEHGEVVMTEVP  137

Query  123  VVREFRLFNIQQCEGLPEAFSQPVVMVDDPIAATE--------QVTRQSAVMITHRRQNR  174
            +++   LFNI QC++LP  F +   + ++  A+          ++   S+V +T   QNR
Sbjct  138  MIKANPLFNIAQCDDLPAHFYENRRLPGEETAGITLPATHRVLDILNASGVKVTSAAQNR  197

Query  175  AYYSPGRDCIIMPHPEQFTSREDYYGTLLHELTHATGHASRLNRDGITAGKHTFGDPTYS  234
            AYYSP++D I+MP + QF    DY +TLLHEL H+TGH+SRL R+GIT++   FGDP YS
Sbjct  198  AYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLAREGITSSSLKFGDPLYS  257

Query  235  FEELVAEMGAAFLCAHVGIQSKLQHDSYIASWLKVLQQDKKAIFRASGLARNACEYLLE  293
            FEELVAEMG+AFLCA++++++ ++H+SY+ SWL+VL+ DKKA+FRA+G AR+ACE+LL+
Sbjct  258  FEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDKKALFRAAGQARQACEFLLN  316

39) O3O_03115 in NC_018661


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  252 bits (943),  Expect = 2e-68, Method: Compositional matrix adjust.
 Identities = 142/299 (48%), Positives = 211/299 (71%), Gaps = 11/299 (3%)

Query  6    DLYQKVTDEIIAALEKGVLPWVRPWREGEPVV---PMNALSGRFYHGINIPLLWNSAERQ  62
            D+YQ VTD I+AALEKG  PW RPWR +E      P+NAL+G+ Y+GIN+ LLW SA  Q
Sbjct  18   DIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTGFPVNALTGHSYQGINVLLLWLSAAEQ  77

Query  63   GYENDRWLTFTQIRNAGGNIHKGERSTLAVFYLPQQREVVDSNGNTVLDADGNPKVMSYA  122
            G+  D WLT+ Q ++ GG+++KGE +T +V++ P +    D +G+ + D +G+  +   +
Sbjct  78   GFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHGELLRDEHGEVVMTEVP  137

Query  123  VVREFRLFNIQQCEGLPEAFSQPVVMVDDPIAATE--------QVTRQSAVMITHRRQNR  174
            +++   LFNI QC++LP  F +   + ++  A+          ++   S+V +T   QNR
Sbjct  138  MIKANPLFNIAQCDDLPAHFYENRRLPGEETAGITLPATHRVLDILNASGVKVTSAAQNR  197

Query  175  AYYSPGRDCIIMPHPEQFTSREDYYGTLLHELTHATGHASRLNRDGITAGKHTFGDPTYS  234
            AYYSP++D I+MP + QF    DY +TLLHEL H+TGH+SRL R+GIT++   FGDP YS
Sbjct  198  AYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLAREGITSSSLKFGDPLYS  257

Query  235  FEELVAEMGAAFLCAHVGIQSKLQHDSYIASWLKVLQQDKKAIFRASGLARNACEYLLE  293
            FEELVAEMG+AFLCA++++++ ++H+SY+ SWL+VL+ DKKA+FRA+G AR+ACE+LL+
Sbjct  258  FEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDKKALFRAAGQARQACEFLLN  316

40) O3K_22280 in NC_018658


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  252 bits (943),  Expect = 2e-68, Method: Compositional matrix adjust.
 Identities = 142/299 (48%), Positives = 211/299 (71%), Gaps = 11/299 (3%)

Query  6    DLYQKVTDEIIAALEKGVLPWVRPWREGEPVV---PMNALSGRFYHGINIPLLWNSAERQ  62
            D+YQ VTD I+AALEKG  PW RPWR +E      P+NAL+G+ Y+GIN+ LLW SA  Q
Sbjct  18   DIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTGFPVNALTGHSYQGINVLLLWLSAAEQ  77

Query  63   GYENDRWLTFTQIRNAGGNIHKGERSTLAVFYLPQQREVVDSNGNTVLDADGNPKVMSYA  122
            G+  D WLT+ Q ++ GG+++KGE +T +V++ P +    D +G+ + D +G+  +   +
Sbjct  78   GFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHGELLRDEHGEVVMTEVP  137

Query  123  VVREFRLFNIQQCEGLPEAFSQPVVMVDDPIAATE--------QVTRQSAVMITHRRQNR  174
            +++   LFNI QC++LP  F +   + ++  A+          ++   S+V +T   QNR
Sbjct  138  MIKANPLFNIAQCDDLPAHFYENRRLPGEETAGITLPATHRVLDILNASGVKVTSAAQNR  197

Query  175  AYYSPGRDCIIMPHPEQFTSREDYYGTLLHELTHATGHASRLNRDGITAGKHTFGDPTYS  234
            AYYSP++D I+MP + QF    DY +TLLHEL H+TGH+SRL R+GIT++   FGDP YS
Sbjct  198  AYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLAREGITSSSLKFGDPLYS  257

Query  235  FEELVAEMGAAFLCAHVGIQSKLQHDSYIASWLKVLQQDKKAIFRASGLARNACEYLLE  293
            FEELVAEMG+AFLCA++++++ ++H+SY+ SWL+VL+ DKKA+FRA+G AR+ACE+LL+
Sbjct  258  FEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDKKALFRAAGQARQACEFLLN  316

41) L483_11800 in NC_021491


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  249 bits (928),  Expect = 2e-67, Method: Compositional matrix adjust.
 Identities = 137/306 (45%), Positives = 215/306 (71%), Gaps = 6/306 (1%)

Query  1    MSDIYLDVTNKIVSALSQGVIPWIKPWTTTGSSADSPFPINAITRRPYAGINIPLLWAEA  60
            + DIY +VT++IV+AL +G  PW +PW  + +++ + FP+NA+T ++Y GIN+ LLW  A
Sbjct  16   VRDIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTG-FPVNALTGHSYQGINVLLLWLSA  74

Query  61   RLRGFTQDRWLTFNQARKAGGHIRKGEQSTLAVLYKPMSKEAHDEDGQVVRDDQGNIKMV  120
              +GF  D WLT+ QA++ GGH+RKGE +T +V++KP+   A D +G+++RD++G++ M 
Sbjct  75   AEQGFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHGELLRDEHGEVVMT  134

Query  121  QFALLRTHCLFNIEQTEGLP----DEEPGPTEHTEPLAFIDHAPAEQLLLASGAQIEHCY  176
            + ++++++ LFNI Q ++LP    ++   P E+T  +++       ++L ASG ++    
Sbjct  135  EVPMIKANPLFNIAQCDDLPAHFYENRRLPGEETAGITLPATHRVLDILNASGVKVTSAA  194

Query  177  GDSAFYQPLRDRIQLPTKAQFEDVGSYYATALHELTHWSGHQSRLNRDGITGGH-AFGSA  235
             + A+Y P +DRI +P  +QF+  + Y AT LHEL H +GH SRL R+GIT++   FG +
Sbjct  195  QNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLAREGITSSSLKFGDP  254

Query  236  AYAFEELVAEMGAAFLCALTATQGELRHEEYLASWLKILKEDKRAIFRASGQAREASEFL  295
             Y+FEELVAEMG+AFLCA  + +GE+ HE YL SWL++LK DK+A+FRA+GQAR+A EFL
Sbjct  255  LYSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDKKALFRAAGQARQACEFL  314

Query  296  LALQAD  301
            L + A 
Sbjct  315  LNVAAS  320

42) T1E_4190 in NC_018220


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  248 bits (925),  Expect = 4e-67, Method: Compositional matrix adjust.
 Identities = 139/310 (45%), Positives = 217/310 (70%), Gaps = 6/310 (1%)

Query  1    MSDVYLDVTNKIVSALSQGVIPWIKPWTTTGSSADSPFPINAITRRPYAGINIPLLWAEA  60
            + D+Y +VT++IV+AL +G  PW +PW  + +++ + FP+NA+T ++Y GIN+ LLW  A
Sbjct  16   VRDIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTG-FPVNALTGHSYQGINVLLLWLSA  74

Query  61   RLRGFTQDRWLTFNQARKAGGHVRKGEQSTLAVLYKPMSKEAHDEDGQVVRDDQGNIKMV  120
              +GF  D WLT+ QA++ GGHVRKGE +T +V++KP+   A D +G+++RD++G++ M 
Sbjct  75   AEQGFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHGELLRDEHGEVVMT  134

Query  121  QFALLRTHCLFNIEQTEGLPD---EEPGLT-EHTEPLAFIDHAPAEQLLLASGAQIEHCY  176
            + ++++++ LFNI Q ++LP    E+  L  E+T  +++       ++L ASG ++    
Sbjct  135  EVPMIKANPLFNIAQCDDLPAHFYENRRLPGEETAGITLPATHRVLDILNASGVKVTSAA  194

Query  177  GDSAFYQPLRDRIQLPTKAQFEDVGSYYATALHELTHWSGHRSRLNRDGITGGH-AFGSA  235
             + A+Y P +DRI +P  +QF+  + Y AT LHEL H +GH SRL R+GIT++   FG +
Sbjct  195  QNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLAREGITSSSLKFGDP  254

Query  236  AYAFEELVAEMGAAFLCALTATQGELRHEEYLASWLKILKEDKRAIFRASGQAREASEFL  295
             Y+FEELVAEMG+AFLCA  + +GE+ HE YL SWL++LK DK+A+FRA+GQAR+A EFL
Sbjct  255  LYSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDKKALFRAAGQARQACEFL  314

Query  296  LALQAERTTE  305
            L + A R + 
Sbjct  315  LNVAASRQAA  324

43) Pput_2959 in NC_009512


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  248 bits (925),  Expect = 4e-67, Method: Compositional matrix adjust.
 Identities = 139/310 (45%), Positives = 217/310 (70%), Gaps = 6/310 (1%)

Query  1    MSDVYLDVTNKIVSALSQGVIPWIKPWTTTGSSADSPFPINAITRRPYAGINIPLLWAEA  60
            + D+Y +VT++IV+AL +G  PW +PW  + +++ + FP+NA+T ++Y GIN+ LLW  A
Sbjct  16   VRDIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTG-FPVNALTGHSYQGINVLLLWLSA  74

Query  61   RLRGFTQDRWLTFNQARKAGGHVRKGEQSTLAVLYKPMSKEAHDEDGQVVRDDQGNIKMV  120
              +GF  D WLT+ QA++ GGHVRKGE +T +V++KP+   A D +G+++RD++G++ M 
Sbjct  75   AEQGFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHGELLRDEHGEVVMT  134

Query  121  QFALLRTHCLFNIEQTEGLPD---EEPGLT-EHTEPLAFIDHAPAEQLLLASGAQIEHCY  176
            + ++++++ LFNI Q ++LP    E+  L  E+T  +++       ++L ASG ++    
Sbjct  135  EVPMIKANPLFNIAQCDDLPAHFYENRRLPGEETAGITLPATHRVLDILNASGVKVTSAA  194

Query  177  GDSAFYQPLRDRIQLPTKAQFEDVGSYYATALHELTHWSGHRSRLNRDGITGGH-AFGSA  235
             + A+Y P +DRI +P  +QF+  + Y AT LHEL H +GH SRL R+GIT++   FG +
Sbjct  195  QNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLAREGITSSSLKFGDP  254

Query  236  AYAFEELVAEMGAAFLCALTATQGELRHEEYLASWLKILKEDKRAIFRASGQAREASEFL  295
             Y+FEELVAEMG+AFLCA  + +GE+ HE YL SWL++LK DK+A+FRA+GQAR+A EFL
Sbjct  255  LYSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDKKALFRAAGQARQACEFL  314

Query  296  LALQAERTTE  305
            L + A R + 
Sbjct  315  LNVAASRQAA  324

44) F382_12770 in NC_021743


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  242 bits (904),  Expect = 2e-65, Method: Compositional matrix adjust.
 Identities = 139/299 (47%), Positives = 215/299 (72%), Gaps = 1/299 (0%)

Query  12   DLYQEVTDKIIAALEQGTAPWLKPWDSVIPYG-GMPCNAISGRLYSGINVLLLWLSAAEH  70
            D+YQEVTD+I+AALE+GT PW +PW +    G G P NA++G+ Y GINVLLLWLSAAE+
Sbjct  18   DIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTGFPVNALTGHSYQGINVLLLWLSAAEQ  77

Query  71   GYIQRKWITAKAAIEAGGHVRKGEKATLAVSYRPYDREKTdddgnlvldddgnPVIEHLA  130
            G+    W+T + A + GGHVRKGE AT +V ++P      D +G+L+ D++G+ V+ +++
Sbjct  78   GFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHGELLRDEHGEVVMTEVP  137

Query  131  SIKKHCLFNIEQCEKLPQDWYETVETPEQLTDENQYAIFEEIRLMLKGMDLQVMVKPSNQ  190
             IK + LFNI QC+ LP + YE    P + T     +  + +  +L++ +++V   + N+
Sbjct  138  MIKANPLFNIAQCDDLPAHFYENRRLPGEETAGITLPATHRVLDILNASGVKVTSAAQNR  197

Query  191  AYYHPRNDHIVMPEMKQFHSPQKFHSVLLHEMTHATGHQSRLARDGIVSGKARFGNKVYA  250
            AYY P +D+IVMP   QF+    +++ LLHE+ H+TGH SRLAR+GI S+  +FG+ +Y+
Sbjct  198  AYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLAREGITSSSLKFGDPLYS  257

Query  251  FEELVAEMGCAFLCSHLGFADVPQNASYIESWIKVLREDKRAIFRASGKAREACQYMLD  309
            FEELVAEMG AFLC++L+  +  ++ SY++SW++VL+ DK+A+FRA+G+AR+AC+++L+
Sbjct  258  FEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDKKALFRAAGQARQACEFLLN  316

45) J451_00020 in NC_021739


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  242 bits (904),  Expect = 2e-65, Method: Compositional matrix adjust.
 Identities = 139/299 (47%), Positives = 215/299 (72%), Gaps = 1/299 (0%)

Query  12   DLYQEVTDKIIAALEQGTAPWLKPWDSVIPYG-GMPCNAISGRLYSGINVLLLWLSAAEH  70
            D+YQEVTD+I+AALE+GT PW +PW +    G G P NA++G+ Y GINVLLLWLSAAE+
Sbjct  18   DIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTGFPVNALTGHSYQGINVLLLWLSAAEQ  77

Query  71   GYIQRKWITAKAAIEAGGHVRKGEKATLAVSYRPYDREKTdddgnlvldddgnPVIEHLA  130
            G+    W+T + A + GGHVRKGE AT +V ++P      D +G+L+ D++G+ V+ +++
Sbjct  78   GFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHGELLRDEHGEVVMTEVP  137

Query  131  SIKKHCLFNIEQCEKLPQDWYETVETPEQLTDENQYAIFEEIRLMLKGMDLQVMVKPSNQ  190
             IK + LFNI QC+ LP + YE    P + T     +  + +  +L++ +++V   + N+
Sbjct  138  MIKANPLFNIAQCDDLPAHFYENRRLPGEETAGITLPATHRVLDILNASGVKVTSAAQNR  197

Query  191  AYYHPRNDHIVMPEMKQFHSPQKFHSVLLHEMTHATGHQSRLARDGIVSGKARFGNKVYA  250
            AYY P +D+IVMP   QF+    +++ LLHE+ H+TGH SRLAR+GI S+  +FG+ +Y+
Sbjct  198  AYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLAREGITSSSLKFGDPLYS  257

Query  251  FEELVAEMGCAFLCSHLGFADVPQNASYIESWIKVLREDKRAIFRASGKAREACQYMLD  309
            FEELVAEMG AFLC++L+  +  ++ SY++SW++VL+ DK+A+FRA+G+AR+AC+++L+
Sbjct  258  FEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDKKALFRAAGQARQACEFLLN  316

46) traC2 in NC_021082


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  242 bits (904),  Expect = 2e-65, Method: Compositional matrix adjust.
 Identities = 139/299 (47%), Positives = 215/299 (72%), Gaps = 1/299 (0%)

Query  12   DLYQEVTDKIIAALEQGTAPWLKPWDSVIPYG-GMPCNAISGRLYSGINVLLLWLSAAEH  70
            D+YQEVTD+I+AALE+GT PW +PW +    G G P NA++G+ Y GINVLLLWLSAAE+
Sbjct  18   DIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTGFPVNALTGHSYQGINVLLLWLSAAEQ  77

Query  71   GYIQRKWITAKAAIEAGGHVRKGEKATLAVSYRPYDREKTdddgnlvldddgnPVIEHLA  130
            G+    W+T + A + GGHVRKGE AT +V ++P      D +G+L+ D++G+ V+ +++
Sbjct  78   GFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHGELLRDEHGEVVMTEVP  137

Query  131  SIKKHCLFNIEQCEKLPQDWYETVETPEQLTDENQYAIFEEIRLMLKGMDLQVMVKPSNQ  190
             IK + LFNI QC+ LP + YE    P + T     +  + +  +L++ +++V   + N+
Sbjct  138  MIKANPLFNIAQCDDLPAHFYENRRLPGEETAGITLPATHRVLDILNASGVKVTSAAQNR  197

Query  191  AYYHPRNDHIVMPEMKQFHSPQKFHSVLLHEMTHATGHQSRLARDGIVSGKARFGNKVYA  250
            AYY P +D+IVMP   QF+    +++ LLHE+ H+TGH SRLAR+GI S+  +FG+ +Y+
Sbjct  198  AYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLAREGITSSSLKFGDPLYS  257

Query  251  FEELVAEMGCAFLCSHLGFADVPQNASYIESWIKVLREDKRAIFRASGKAREACQYMLD  309
            FEELVAEMG AFLC++L+  +  ++ SY++SW++VL+ DK+A+FRA+G+AR+AC+++L+
Sbjct  258  FEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDKKALFRAAGQARQACEFLLN  316

47) D650_16260 in NC_020833


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  242 bits (904),  Expect = 2e-65, Method: Compositional matrix adjust.
 Identities = 139/299 (47%), Positives = 215/299 (72%), Gaps = 1/299 (0%)

Query  12   DLYQEVTDKIIAALEQGTAPWLKPWDSVIPYG-GMPCNAISGRLYSGINVLLLWLSAAEH  70
            D+YQEVTD+I+AALE+GT PW +PW +    G G P NA++G+ Y GINVLLLWLSAAE+
Sbjct  18   DIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTGFPVNALTGHSYQGINVLLLWLSAAEQ  77

Query  71   GYIQRKWITAKAAIEAGGHVRKGEKATLAVSYRPYDREKTdddgnlvldddgnPVIEHLA  130
            G+    W+T + A + GGHVRKGE AT +V ++P      D +G+L+ D++G+ V+ +++
Sbjct  78   GFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHGELLRDEHGEVVMTEVP  137

Query  131  SIKKHCLFNIEQCEKLPQDWYETVETPEQLTDENQYAIFEEIRLMLKGMDLQVMVKPSNQ  190
             IK + LFNI QC+ LP + YE    P + T     +  + +  +L++ +++V   + N+
Sbjct  138  MIKANPLFNIAQCDDLPAHFYENRRLPGEETAGITLPATHRVLDILNASGVKVTSAAQNR  197

Query  191  AYYHPRNDHIVMPEMKQFHSPQKFHSVLLHEMTHATGHQSRLARDGIVSGKARFGNKVYA  250
            AYY P +D+IVMP   QF+    +++ LLHE+ H+TGH SRLAR+GI S+  +FG+ +Y+
Sbjct  198  AYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLAREGITSSSLKFGDPLYS  257

Query  251  FEELVAEMGCAFLCSHLGFADVPQNASYIESWIKVLREDKRAIFRASGKAREACQYMLD  309
            FEELVAEMG AFLC++L+  +  ++ SY++SW++VL+ DK+A+FRA+G+AR+AC+++L+
Sbjct  258  FEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDKKALFRAAGQARQACEFLLN  316

48) N220_08175 in NC_021883


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  242 bits (904),  Expect = 2e-65, Method: Compositional matrix adjust.
 Identities = 139/299 (47%), Positives = 215/299 (72%), Gaps = 1/299 (0%)

Query  12   DLYQEVTDKIIAALEQGTAPWLKPWDSVIPYG-GMPCNAISGRLYSGINVLLLWLSAAEH  70
            D+YQEVTD+I+AALE+GT PW +PW +    G G P NA++G+ Y GINVLLLWLSAAE+
Sbjct  18   DIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTGFPVNALTGHSYQGINVLLLWLSAAEQ  77

Query  71   GYIQRKWITAKAAIEAGGHVRKGEKATLAVSYRPYDREKTdddgnlvldddgnPVIEHLA  130
            G+    W+T + A + GGHVRKGE AT +V ++P      D +G+L+ D++G+ V+ +++
Sbjct  78   GFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHGELLRDEHGEVVMTEVP  137

Query  131  SIKKHCLFNIEQCEKLPQDWYETVETPEQLTDENQYAIFEEIRLMLKGMDLQVMVKPSNQ  190
             IK + LFNI QC+ LP + YE    P + T     +  + +  +L++ +++V   + N+
Sbjct  138  MIKANPLFNIAQCDDLPAHFYENRRLPGEETAGITLPATHRVLDILNASGVKVTSAAQNR  197

Query  191  AYYHPRNDHIVMPEMKQFHSPQKFHSVLLHEMTHATGHQSRLARDGIVSGKARFGNKVYA  250
            AYY P +D+IVMP   QF+    +++ LLHE+ H+TGH SRLAR+GI S+  +FG+ +Y+
Sbjct  198  AYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLAREGITSSSLKFGDPLYS  257

Query  251  FEELVAEMGCAFLCSHLGFADVPQNASYIESWIKVLREDKRAIFRASGKAREACQYMLD  309
            FEELVAEMG AFLC++L+  +  ++ SY++SW++VL+ DK+A+FRA+G+AR+AC+++L+
Sbjct  258  FEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDKKALFRAAGQARQACEFLLN  316

49) HS_1780 in NC_008309


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  242 bits (904),  Expect = 2e-65, Method: Compositional matrix adjust.
 Identities = 127/301 (43%), Positives = 209/301 (70%), Gaps = 1/301 (0%)

Query  8    KDIYQEITDRIITALEEGTVPWLKPWSHPEGN-LGIPCNAVSGRCYQGINILLLWIAVAE  66
            +DIYQE+TDRI++ALE GT PW +PW  +EG   G+P NA++G+ YQGIN+LLLW++ AE
Sbjct  17   RDIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTGFPVNALTGHSYQGINVLLLWLSAAE  76

Query  67   NGYQQCKWITAQAANKLGGYVRRGEKATIVASYCPIEREKCDGEGNPICDEEGNPELEKF  126
            +G+    W+T + A++LGG VR+GE AT    + P+     D +G+ + DE+G+  +   
Sbjct  77   QGFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHGELLRDEHGEVVMTEV  136

Query  127  AILKRYPVFNIEQCEGLPKAMFDKTQERAVDSDLTQYRIYADIRKIIDGMSLTVDIVPST  186
            +++K  P+FNI QC++LP   +++ +  + ++          +  I+++ ++ V   +  
Sbjct  137  PMIKANPLFNIAQCDDLPAHFYENRRLPGEETAGITLPATHRVLDILNASGVKVTSAAQN  196

Query  187  EAFYQPKADKIVMPEMKQFSSEQDFYSVLLHEMTHATGHTSRLNREGIASGKAKFGNKVY  246
             A+Y P  D+IVMP   QF  + D+ + LLHE+ H+TGH SRL REGI+S+  KFG+ +Y
Sbjct  197  RAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLAREGITSSSLKFGDPLY  256

Query  247  AFEELIAEMGGAFLCAHLGFNRVPQNAAYIQSWLKILKEDNRAILKASGFARKACEYMLE  306
            +FEEL+AEMG+AFLCA+L+ +   ++ +Y++SWL++LK D++A+++A+G AR+ACE++L+
Sbjct  257  SFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDKKALFRAAGQARQACEFLLN  316

Query  307  T  307
             
Sbjct  317  V  317

50) YSA_00817 in NC_017986


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  240 bits (895),  Expect = 1e-64, Method: Compositional matrix adjust.
 Identities = 136/311 (44%), Positives = 219/311 (71%), Gaps = 8/311 (2%)

Query  1    MSDIYLDVTNKIVSALSQGVIPWIKPWTTTGSSADSPFPINAITRRPYAGINIPLLWAEA  60
            + DIY +VT++IV+AL +G  PW +PW  + +++ + FP+NA+T ++Y GIN+ LLW  A
Sbjct  16   VRDIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTG-FPVNALTGHSYQGINVLLLWLSA  74

Query  61   RLRGYRQDRWLTYNQARKAGGHVRKGEQSTLAVLYKPMSKETHDEDGQVVRDEQGNIKMV  120
              +G+  D WLTY QA++ GGHVRKGE +T +V++KP+   + D +G+++RDE+G++ M 
Sbjct  75   AEQGFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHGELLRDEHGEVVMT  134

Query  121  QFALLRTHCLFNIEQTEGLTNE--EQPHVEGEDPVAFIDDAPAER---LLAASGARIEHR  175
            + ++++++ LFNI Q ++L  +  E+ ++ GE+  + I  ++++R   +L ASG ++   
Sbjct  135  EVPMIKANPLFNIAQCDDLPAHFYENRRLPGEETAG-ITLPATHRVLDILNASGVKVTSA  193

Query  176  YGDDAFYLPIRDLIQLPTKAQFVDVASYYATALHELTHWSGHHARLNREGITGGH-AFGS  234
              + A+Y P +D I +P  +QF   A Y AT LHEL H +GH +RL REGIT++   FG 
Sbjct  194  AQNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLAREGITSSSLKFGD  253

Query  235  AAYAFEELVAEMGAAFLCALTGTQGELRHEEYLASWLKILKEDKRAIFRASGQAREASEY  294
            + Y+FEELVAEMG+AFLCA  + +GE+ HE YL SWL++LK DK+A+FRA+GQAR+A E+
Sbjct  254  PLYSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDKKALFRAAGQARQACEF  313

Query  295  LVALQSDQSSE  305
            L+ + + + + 
Sbjct  314  LLNVAASRQAA  324

51) HSM_1683 in NC_010519


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  240 bits (896),  Expect = 8e-65, Method: Compositional matrix adjust.
 Identities = 131/303 (44%), Positives = 212/303 (70%), Gaps = 6/303 (1%)

Query  8    DLYQHITDRIVAALEQGTAPWLKPWSHPE-CNMALPRNAVSNRLYSGINTLLLWIATAEY  66
            D+YQ++TDRIVAALE+GT PW +PW  +E    ++P NA++ + Y GIN LLLW+++AE 
Sbjct  18   DIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTGFPVNALTGHSYQGINVLLLWLSAAEQ  77

Query  67   GYKQSKWITAKKANELGGYIRKGEKATVVMNYRPDKREKLDEEGNIVYDEEGNPEIEQHF  126
            G+    W+T ++A++LGG +RKGE AT  + ++P K    D +G+++ DE+G+  + +  
Sbjct  78   GFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHGELLRDEHGEVVMTEVP  137

Query  127  FIKKHNLFNLDQCENLPEELYDPISEPKQPTSDPNQYEIFADIR--QIIKGMDLHVEMKP  184
             IK + LFN+ QC++LP ++Y+   + + P  +     + A  R  +I+++ ++ V   +
Sbjct  138  MIKANPLFNIAQCDDLPAHFYE---NRRLPGEETAGITLPATHRVLDILNASGVKVTSAA  194

Query  185  SNRAYYQPSADLVVMPEIKQFENAQAFHSVLLHEMTHATGAAKRLDREGITSGKAKFGNK  244
             NRAYY PS D +VMP   QF+    +++ LLHE+ H+TG + RL REGITS+  KFG+ 
Sbjct  195  QNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLAREGITSSSLKFGDP  254

Query  245  VYAFEELVAEMGGAFLCAYLGFDTVPQNAAYIESWIRVIKEDKRAIVRASGKAREACQYM  304
            +Y+FEELVAEMG+AFLCA L+ +   ++ +Y++SW+RV+K DK+A+ RA+G+AR+AC+++
Sbjct  255  LYSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDKKALFRAAGQARQACEFL  314

Query  305  LDA  307
            L+ 
Sbjct  315  LNV  317

52) MHH_c22670 in NC_021082


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  240 bits (896),  Expect = 8e-65, Method: Compositional matrix adjust.
 Identities = 131/303 (44%), Positives = 212/303 (70%), Gaps = 6/303 (1%)

Query  8    DLYQHITDRIVAALEQGTAPWLKPWSHPE-CNMALPRNAVSNRLYSGINTLLLWIATAEY  66
            D+YQ++TDRIVAALE+GT PW +PW  +E    ++P NA++ + Y GIN LLLW+++AE 
Sbjct  18   DIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTGFPVNALTGHSYQGINVLLLWLSAAEQ  77

Query  67   GYKQSKWITAKKANELGGYIRKGEKATVVMNYRPDKREKLDEEGNIVYDEEGNPEIEQHF  126
            G+    W+T ++A++LGG +RKGE AT  + ++P K    D +G+++ DE+G+  + +  
Sbjct  78   GFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHGELLRDEHGEVVMTEVP  137

Query  127  FIKKHNLFNLDQCENLPEELYDPISEPKQPTSDPNQYEIFADIR--QIIKGMDLHVEMKP  184
             IK + LFN+ QC++LP ++Y+   + + P  +     + A  R  +I+++ ++ V   +
Sbjct  138  MIKANPLFNIAQCDDLPAHFYE---NRRLPGEETAGITLPATHRVLDILNASGVKVTSAA  194

Query  185  SNRAYYQPSADLVVMPEIKQFENAQAFHSVLLHEMTHATGAAKRLDREGITSGKAKFGNK  244
             NRAYY PS D +VMP   QF+    +++ LLHE+ H+TG + RL REGITS+  KFG+ 
Sbjct  195  QNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLAREGITSSSLKFGDP  254

Query  245  VYAFEELVAEMGGAFLCAYLGFDTVPQNAAYIESWIRVIKEDKRAIVRASGKAREACQYM  304
            +Y+FEELVAEMG+AFLCA L+ +   ++ +Y++SW+RV+K DK+A+ RA+G+AR+AC+++
Sbjct  255  LYSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDKKALFRAAGQARQACEFL  314

Query  305  LDA  307
            L+ 
Sbjct  315  LNV  317

53) Pmu_02920 in NC_016808


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  240 bits (896),  Expect = 8e-65, Method: Compositional matrix adjust.
 Identities = 131/303 (44%), Positives = 212/303 (70%), Gaps = 6/303 (1%)

Query  8    DLYQHITDRIVAALEQGTAPWLKPWSHPE-CNMALPRNAVSNRLYSGINTLLLWIATAEY  66
            D+YQ++TDRIVAALE+GT PW +PW  +E    ++P NA++ + Y GIN LLLW+++AE 
Sbjct  18   DIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTGFPVNALTGHSYQGINVLLLWLSAAEQ  77

Query  67   GYKQSKWITAKKANELGGYIRKGEKATVVMNYRPDKREKLDEEGNIVYDEEGNPEIEQHF  126
            G+    W+T ++A++LGG +RKGE AT  + ++P K    D +G+++ DE+G+  + +  
Sbjct  78   GFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHGELLRDEHGEVVMTEVP  137

Query  127  FIKKHNLFNLDQCENLPEELYDPISEPKQPTSDPNQYEIFADIR--QIIKGMDLHVEMKP  184
             IK + LFN+ QC++LP ++Y+   + + P  +     + A  R  +I+++ ++ V   +
Sbjct  138  MIKANPLFNIAQCDDLPAHFYE---NRRLPGEETAGITLPATHRVLDILNASGVKVTSAA  194

Query  185  SNRAYYQPSADLVVMPEIKQFENAQAFHSVLLHEMTHATGAAKRLDREGITSGKAKFGNK  244
             NRAYY PS D +VMP   QF+    +++ LLHE+ H+TG + RL REGITS+  KFG+ 
Sbjct  195  QNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLAREGITSSSLKFGDP  254

Query  245  VYAFEELVAEMGGAFLCAYLGFDTVPQNAAYIESWIRVIKEDKRAIVRASGKAREACQYM  304
            +Y+FEELVAEMG+AFLCA L+ +   ++ +Y++SW+RV+K DK+A+ RA+G+AR+AC+++
Sbjct  255  LYSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDKKALFRAAGQARQACEFL  314

Query  305  LDA  307
            L+ 
Sbjct  315  LNV  317

54) PPS_2335 in NC_015733


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  239 bits (891),  Expect = 2e-64, Method: Compositional matrix adjust.
 Identities = 141/311 (46%), Positives = 218/311 (71%), Gaps = 8/311 (2%)

Query  1    MSDIYLDVTNKIVSALSQGVIPWIKPWTTSGSSADAPFPINAITRRPYAGINIPLLWAEA  60
            + DIY +VT++IV+AL +G  PW +PW  S +++ + FP+NA+T ++Y GIN+ LLW  A
Sbjct  16   VRDIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTG-FPVNALTGHSYQGINVLLLWLSA  74

Query  61   RLRGYRQDRWLTYNQARKAGGHIRKGEQSTLAVLYKPMSKEAHDEDGQVVRDEQGNVKMV  120
              +G+  D WLTY QA++ GGH+RKGE +T +V++KP+   A D +G+++RDE+G+V M 
Sbjct  75   AEQGFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHGELLRDEHGEVVMT  134

Query  121  QFALLRTHCLFNIEQTEGLPIE--EQQNDEGEDTMAFIDHAPAERLLD---ASGAHIEHR  175
            + ++++++ LFNI Q ++LP +  E++   GE+T + I  ++++R+LD   ASG  +   
Sbjct  135  EVPMIKANPLFNIAQCDDLPAHFYENRRLPGEETAG-ITLPATHRVLDILNASGVKVTSA  193

Query  176  YGDSAFYLPIRDLIQLPTKAQFVDVGSYYATALHELTHWSGHHSRLNREGITGCH-AFGS  234
              + A+Y P +D I +P  +QF   + Y AT LHEL H +GH SRL REGIT+    FG 
Sbjct  194  AQNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLAREGITSSSLKFGD  253

Query  235  AAYAFEELVAEMGAAFLCALTGTQGELRHEEYLASWLKILKEDKRAIFRASGLAREASEY  294
            + Y+FEELVAEMG+AFLCA  + +GE+ HE YL SWL++LK DK+A+FRA+G AR+A E+
Sbjct  254  PLYSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDKKALFRAAGQARQACEF  313

Query  295  LLALMPDQATE  305
            LL + + + + 
Sbjct  314  LLNVAASRQAA  324

55) F382_00020 in NC_021743


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  238 bits (889),  Expect = 3e-64, Method: Compositional matrix adjust.
 Identities = 128/303 (43%), Positives = 212/303 (70%), Gaps = 6/303 (1%)

Query  8    DLYQHITDRIVVALEQGTAPWLKPWSHPE-CNMALPRNAVSNRLYSGINTLLLWIATAEH  66
            D+YQ++TDRIV ALE+GT PW +PW  +E    ++P NA++ + Y GIN LLLW+++AE+
Sbjct  18   DIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTGFPVNALTGHSYQGINVLLLWLSAAEQ  77

Query  67   GYKQCKWITAKKANELGGYIRKGEKATVVMNYRPDEREKLDEEGNIVYDEEGNPEMERHF  126
            G+    W+T ++A++LGG +RKGE AT  + ++P      D +G+++ DE+G+  M    
Sbjct  78   GFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHGELLRDEHGEVVMTEVP  137

Query  127  FINKHNLFNLDQCENLPVELYDPVSEPKQPKSEPNQYDIFAEIR--QIIKGMDLQVEMKP  184
             I+ + LFN+ QC++LP ++Y+   + + P  E     + A  R  +I+++ +++V   +
Sbjct  138  MIKANPLFNIAQCDDLPAHFYE---NRRLPGEETAGITLPATHRVLDILNASGVKVTSAA  194

Query  185  SNRAFYQPGEDKVVMPEMKQFANAQAFHSVLLHEMTHATGANNRLNREGITSGKAKFGNK  244
             NRA+Y P++D++VMP   QF     +++ LLHE+ H+TG  +RL REGITS+  KFG+ 
Sbjct  195  QNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLAREGITSSSLKFGDP  254

Query  245  VYAFEELIAEMGGAFLCAYLGFDTVPQNAAYIESWIRVLKEDKRAIVRASGKAREACQYM  304
            +Y+FEEL+AEMG+AFLCA L+ +   ++ +Y++SW+RVLK DK+A+ RA+G+AR+AC+++
Sbjct  255  LYSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDKKALFRAAGQARQACEFL  314

Query  305  LDA  307
            L+ 
Sbjct  315  LNV  317

56) J451_12985 in NC_021739


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  238 bits (889),  Expect = 3e-64, Method: Compositional matrix adjust.
 Identities = 128/303 (43%), Positives = 212/303 (70%), Gaps = 6/303 (1%)

Query  8    DLYQHITDRIVVALEQGTAPWLKPWSHPE-CNMALPRNAVSNRLYSGINTLLLWIATAEH  66
            D+YQ++TDRIV ALE+GT PW +PW  +E    ++P NA++ + Y GIN LLLW+++AE+
Sbjct  18   DIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTGFPVNALTGHSYQGINVLLLWLSAAEQ  77

Query  67   GYKQCKWITAKKANELGGYIRKGEKATVVMNYRPDEREKLDEEGNIVYDEEGNPEMERHF  126
            G+    W+T ++A++LGG +RKGE AT  + ++P      D +G+++ DE+G+  M    
Sbjct  78   GFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHGELLRDEHGEVVMTEVP  137

Query  127  FINKHNLFNLDQCENLPVELYDPVSEPKQPKSEPNQYDIFAEIR--QIIKGMDLQVEMKP  184
             I+ + LFN+ QC++LP ++Y+   + + P  E     + A  R  +I+++ +++V   +
Sbjct  138  MIKANPLFNIAQCDDLPAHFYE---NRRLPGEETAGITLPATHRVLDILNASGVKVTSAA  194

Query  185  SNRAFYQPGEDKVVMPEMKQFANAQAFHSVLLHEMTHATGANNRLNREGITSGKAKFGNK  244
             NRA+Y P++D++VMP   QF     +++ LLHE+ H+TG  +RL REGITS+  KFG+ 
Sbjct  195  QNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLAREGITSSSLKFGDP  254

Query  245  VYAFEELIAEMGGAFLCAYLGFDTVPQNAAYIESWIRVLKEDKRAIVRASGKAREACQYM  304
            +Y+FEEL+AEMG+AFLCA L+ +   ++ +Y++SW+RVLK DK+A+ RA+G+AR+AC+++
Sbjct  255  LYSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDKKALFRAAGQARQACEFL  314

Query  305  LDA  307
            L+ 
Sbjct  315  LNV  317

57) traC1 in NC_021082


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  238 bits (889),  Expect = 3e-64, Method: Compositional matrix adjust.
 Identities = 128/303 (43%), Positives = 212/303 (70%), Gaps = 6/303 (1%)

Query  8    DLYQHITDRIVVALEQGTAPWLKPWSHPE-CNMALPRNAVSNRLYSGINTLLLWIATAEH  66
            D+YQ++TDRIV ALE+GT PW +PW  +E    ++P NA++ + Y GIN LLLW+++AE+
Sbjct  18   DIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTGFPVNALTGHSYQGINVLLLWLSAAEQ  77

Query  67   GYKQCKWITAKKANELGGYIRKGEKATVVMNYRPDEREKLDEEGNIVYDEEGNPEMERHF  126
            G+    W+T ++A++LGG +RKGE AT  + ++P      D +G+++ DE+G+  M    
Sbjct  78   GFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHGELLRDEHGEVVMTEVP  137

Query  127  FINKHNLFNLDQCENLPVELYDPVSEPKQPKSEPNQYDIFAEIR--QIIKGMDLQVEMKP  184
             I+ + LFN+ QC++LP ++Y+   + + P  E     + A  R  +I+++ +++V   +
Sbjct  138  MIKANPLFNIAQCDDLPAHFYE---NRRLPGEETAGITLPATHRVLDILNASGVKVTSAA  194

Query  185  SNRAFYQPGEDKVVMPEMKQFANAQAFHSVLLHEMTHATGANNRLNREGITSGKAKFGNK  244
             NRA+Y P++D++VMP   QF     +++ LLHE+ H+TG  +RL REGITS+  KFG+ 
Sbjct  195  QNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLAREGITSSSLKFGDP  254

Query  245  VYAFEELIAEMGGAFLCAYLGFDTVPQNAAYIESWIRVLKEDKRAIVRASGKAREACQYM  304
            +Y+FEEL+AEMG+AFLCA L+ +   ++ +Y++SW+RVLK DK+A+ RA+G+AR+AC+++
Sbjct  255  LYSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDKKALFRAAGQARQACEFL  314

Query  305  LDA  307
            L+ 
Sbjct  315  LNV  317

58) D648_9430 in NC_020834


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  238 bits (889),  Expect = 3e-64, Method: Compositional matrix adjust.
 Identities = 128/303 (43%), Positives = 212/303 (70%), Gaps = 6/303 (1%)

Query  8    DLYQHITDRIVVALEQGTAPWLKPWSHPE-CNMALPRNAVSNRLYSGINTLLLWIATAEH  66
            D+YQ++TDRIV ALE+GT PW +PW  +E    ++P NA++ + Y GIN LLLW+++AE+
Sbjct  18   DIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTGFPVNALTGHSYQGINVLLLWLSAAEQ  77

Query  67   GYKQCKWITAKKANELGGYIRKGEKATVVMNYRPDEREKLDEEGNIVYDEEGNPEMERHF  126
            G+    W+T ++A++LGG +RKGE AT  + ++P      D +G+++ DE+G+  M    
Sbjct  78   GFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHGELLRDEHGEVVMTEVP  137

Query  127  FINKHNLFNLDQCENLPVELYDPVSEPKQPKSEPNQYDIFAEIR--QIIKGMDLQVEMKP  184
             I+ + LFN+ QC++LP ++Y+   + + P  E     + A  R  +I+++ +++V   +
Sbjct  138  MIKANPLFNIAQCDDLPAHFYE---NRRLPGEETAGITLPATHRVLDILNASGVKVTSAA  194

Query  185  SNRAFYQPGEDKVVMPEMKQFANAQAFHSVLLHEMTHATGANNRLNREGITSGKAKFGNK  244
             NRA+Y P++D++VMP   QF     +++ LLHE+ H+TG  +RL REGITS+  KFG+ 
Sbjct  195  QNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLAREGITSSSLKFGDP  254

Query  245  VYAFEELIAEMGGAFLCAYLGFDTVPQNAAYIESWIRVLKEDKRAIVRASGKAREACQYM  304
            +Y+FEEL+AEMG+AFLCA L+ +   ++ +Y++SW+RVLK DK+A+ RA+G+AR+AC+++
Sbjct  255  LYSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDKKALFRAAGQARQACEFL  314

Query  305  LDA  307
            L+ 
Sbjct  315  LNV  317

59) D650_18140 in NC_020833


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  238 bits (889),  Expect = 3e-64, Method: Compositional matrix adjust.
 Identities = 128/303 (43%), Positives = 212/303 (70%), Gaps = 6/303 (1%)

Query  8    DLYQHITDRIVVALEQGTAPWLKPWSHPE-CNMALPRNAVSNRLYSGINTLLLWIATAEH  66
            D+YQ++TDRIV ALE+GT PW +PW  +E    ++P NA++ + Y GIN LLLW+++AE+
Sbjct  18   DIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTGFPVNALTGHSYQGINVLLLWLSAAEQ  77

Query  67   GYKQCKWITAKKANELGGYIRKGEKATVVMNYRPDEREKLDEEGNIVYDEEGNPEMERHF  126
            G+    W+T ++A++LGG +RKGE AT  + ++P      D +G+++ DE+G+  M    
Sbjct  78   GFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHGELLRDEHGEVVMTEVP  137

Query  127  FINKHNLFNLDQCENLPVELYDPVSEPKQPKSEPNQYDIFAEIR--QIIKGMDLQVEMKP  184
             I+ + LFN+ QC++LP ++Y+   + + P  E     + A  R  +I+++ +++V   +
Sbjct  138  MIKANPLFNIAQCDDLPAHFYE---NRRLPGEETAGITLPATHRVLDILNASGVKVTSAA  194

Query  185  SNRAFYQPGEDKVVMPEMKQFANAQAFHSVLLHEMTHATGANNRLNREGITSGKAKFGNK  244
             NRA+Y P++D++VMP   QF     +++ LLHE+ H+TG  +RL REGITS+  KFG+ 
Sbjct  195  QNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLAREGITSSSLKFGDP  254

Query  245  VYAFEELIAEMGGAFLCAYLGFDTVPQNAAYIESWIRVLKEDKRAIVRASGKAREACQYM  304
            +Y+FEEL+AEMG+AFLCA L+ +   ++ +Y++SW+RVLK DK+A+ RA+G+AR+AC+++
Sbjct  255  LYSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDKKALFRAAGQARQACEFL  314

Query  305  LDA  307
            L+ 
Sbjct  315  LNV  317

60) N220_04945 in NC_021883


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  238 bits (889),  Expect = 3e-64, Method: Compositional matrix adjust.
 Identities = 128/303 (43%), Positives = 212/303 (70%), Gaps = 6/303 (1%)

Query  8    DLYQHITDRIVVALEQGTAPWLKPWSHPE-CNMALPRNAVSNRLYSGINTLLLWIATAEH  66
            D+YQ++TDRIV ALE+GT PW +PW  +E    ++P NA++ + Y GIN LLLW+++AE+
Sbjct  18   DIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTGFPVNALTGHSYQGINVLLLWLSAAEQ  77

Query  67   GYKQCKWITAKKANELGGYIRKGEKATVVMNYRPDEREKLDEEGNIVYDEEGNPEMERHF  126
            G+    W+T ++A++LGG +RKGE AT  + ++P      D +G+++ DE+G+  M    
Sbjct  78   GFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHGELLRDEHGEVVMTEVP  137

Query  127  FINKHNLFNLDQCENLPVELYDPVSEPKQPKSEPNQYDIFAEIR--QIIKGMDLQVEMKP  184
             I+ + LFN+ QC++LP ++Y+   + + P  E     + A  R  +I+++ +++V   +
Sbjct  138  MIKANPLFNIAQCDDLPAHFYE---NRRLPGEETAGITLPATHRVLDILNASGVKVTSAA  194

Query  185  SNRAFYQPGEDKVVMPEMKQFANAQAFHSVLLHEMTHATGANNRLNREGITSGKAKFGNK  244
             NRA+Y P++D++VMP   QF     +++ LLHE+ H+TG  +RL REGITS+  KFG+ 
Sbjct  195  QNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLAREGITSSSLKFGDP  254

Query  245  VYAFEELIAEMGGAFLCAYLGFDTVPQNAAYIESWIRVLKEDKRAIVRASGKAREACQYM  304
            +Y+FEEL+AEMG+AFLCA L+ +   ++ +Y++SW+RVLK DK+A+ RA+G+AR+AC+++
Sbjct  255  LYSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDKKALFRAAGQARQACEFL  314

Query  305  LDA  307
            L+ 
Sbjct  315  LNV  317

61) L483_22325 in NC_021491


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  236 bits (882),  Expect = 1e-63, Method: Compositional matrix adjust.
 Identities = 135/303 (45%), Positives = 209/303 (69%), Gaps = 6/303 (1%)

Query  1    MSDIYLDVTNKIVNALNQGVIPWIKPWTTSGSSVDAPFPINAITRRPYAGINIPLLWAEA  60
            + DIY +VT++IV AL++G  PW +PW  S ++ ++ FP+NA+T ++Y GIN+ LLW  A
Sbjct  16   VRDIYQEVTDRIVAALEKGTRPWKRPWRPSEGT-GTGFPVNALTGHSYQGINVLLLWLSA  74

Query  61   RLRGYRQDRWLTYNQARKAGGHVRKGEQSTLAVLYKPMSKEAHDEDGQVVRDEQGNVKMV  120
              +G+  D WLTY QA++ GGHVRKGE +T +V++KP+   A D +G+++RDE+G+V M 
Sbjct  75   AEQGFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHGELLRDEHGEVVMT  134

Query  121  QFALLRTHCLFNIEQTEGLP----NDEQYHDEGKDPMAFIDHAPAERLLAASGARIEHRY  176
            + ++++++ LFNI Q ++LP    ++ +  +E    +++        +L ASG ++    
Sbjct  135  EVPMIKANPLFNIAQCDDLPAHFYENRRLPGEETAGITLPATHRVLDILNASGVKVTSAA  194

Query  177  GDDAFYLPIRDLIQLPTKAQFVDVGSYYATALHELTHWSGHHARLNREGITGGH-AFGSA  235
             + A+Y P +D I +P  +QF   + Y AT LHEL H +GH +RL REGIT++   FG +
Sbjct  195  QNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLAREGITSSSLKFGDP  254

Query  236  AYAFEELVAEMGAAFLCALTGTQGELRHEEYLASWLKILKEDKRAIFRASGLAREASEYL  295
             Y+FEELVAEMG+AFLCA  + +GE+ HE YL SWL++LK DK+A+FRA+G AR+A E+L
Sbjct  255  LYSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDKKALFRAAGQARQACEFL  314

Query  296  LAL  298
            L +
Sbjct  315  LNV  317

62) PputW619_3336 in NC_010501


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  235 bits (877),  Expect = 2e-63, Method: Compositional matrix adjust.
 Identities = 134/310 (44%), Positives = 213/310 (69%), Gaps = 6/310 (1%)

Query  1    MSDIYLDVTNKIVNALNQGVIPWIKPWTTTGLQNDSPFPINAITRRPYAGINIPLLWAEA  60
            + DIY +VT++IV AL++G  PW +PW  +    ++ FP+NA+T ++Y GIN+ LLW  A
Sbjct  16   VRDIYQEVTDRIVAALEKGTRPWKRPWRPSE-GTGTGFPVNALTGHSYQGINVLLLWLSA  74

Query  61   RLRGYRQDLWLTYNQARKAGGHVRKGEQSTLAVLYKPMSKEAHDEEGQVVRDEQGNIKMV  120
              +G+  D+WLTY QA++ GGHVRKGE +T +V++KP+   A D +G+++RDE+G++ M 
Sbjct  75   AEQGFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHGELLRDEHGEVVMT  134

Query  121  QFALLRTHCLFNIEQTEGLPNE--EQPW--DESIDSTAFIDHAPAEQLLIASGARIEHRY  176
            + ++++++ LFNI Q ++LP +  E+ +  +E   + ++       ++L ASG ++    
Sbjct  135  EVPMIKANPLFNIAQCDDLPAHFYENRRLPGEETAGITLPATHRVLDILNASGVKVTSAA  194

Query  177  GDSACYLPIRDLIQLPTKAQFVDVGSYYATALHELTHWSGHHARLNREGITGGH-AFGSA  235
             + A Y P +D I +P  +QF   + Y AT LHEL H +GH +RL REGIT++   FG +
Sbjct  195  QNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLAREGITSSSLKFGDP  254

Query  236  AYAFEELVAEMGAAFLCAFTGTQGELRHEEYLASWLKILKEDKRTIFRASGQAREASEYL  295
             Y+FEELVAEMG+AFLCA  + +GE+ HE YL SWL++LK DK+++FRA+GQAR+A E+L
Sbjct  255  LYSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDKKALFRAAGQARQACEFL  314

Query  296  LALQSDQASE  305
            L + + + + 
Sbjct  315  LNVAASRQAA  324

63) D648_11310 in NC_020834


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  233 bits (869),  Expect = 1e-62, Method: Compositional matrix adjust.
 Identities = 133/294 (46%), Positives = 209/294 (72%), Gaps = 1/294 (0%)

Query  1    MTDKIIAALEQGTAPWLKPWDSVIPYG-GMPCNAISGRLYSGINVLLLWLSAAEHGYIQR  59
            +TD+I+AALE+GT PW +PW +    G G P NA++G+ Y GINVLLLWLSAAE+G+   
Sbjct  23   VTDRIVAALEKGTRPWKRPWRPSEGTGTGFPVNALTGHSYQGINVLLLWLSAAEQGFGYD  82

Query  60   KWITAKAAIEAGGHVRKGEKVTLAVSYRPYDREKTdddgnlvldddgnPVIEHLASIKKH  119
             W+T + A + GGHVRKGE  T +V ++P      D +G+L+ D++G+ V+ +++ IK +
Sbjct  83   IWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHGELLRDEHGEVVMTEVPMIKAN  142

Query  120  CLFNIEQCEKLPQDWYETVETPEQLTDENQYAIFEEIRLMLKGMDLQVMVKPSNQAYYHP  179
             LFNI QC+ LP + YE    P + T     +  + +  +L++ +++V   + N+AYY P
Sbjct  143  PLFNIAQCDDLPAHFYENRRLPGEETAGITLPATHRVLDILNASGVKVTSAAQNRAYYSP  202

Query  180  RNDHIVMPEMKQFHSPQKFHSVLLHEMTHATGHQSRLARDGIVSGKARFGNKVYAFEELV  239
             +D+IVMP   QF+    +++ LLHE+ H+TGH SRLAR+GI S+  +FG+ +Y+FEELV
Sbjct  203  SQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLAREGITSSSLKFGDPLYSFEELV  262

Query  240  AEMGCAFLCSHLGFADVPQNASYIESWIKVLREDKRAIFRASGKAREACQYMLD  293
            AEMG AFLC++L+  +  ++ SY++SW++VL+ DK+A+FRA+G+AR+AC+++L+
Sbjct  263  AEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDKKALFRAAGQARQACEFLLN  316

64) PFLU1917 in NC_012660


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  227 bits (845),  Expect = 9e-61, Method: Compositional matrix adjust.
 Identities = 136/310 (44%), Positives = 219/310 (71%), Gaps = 8/310 (2%)

Query  28   EEIAMRDIYQDVTDKIVTALDQGVAPWIKPWSSSGSAYIGHQPYPINAITRRPYSGINLP  87
             + ++RDIYQ+VTD+IV+AL++G  PW +PW +S ++  G   +P+NA+T ++Y GIN+ 
Sbjct  12   ADKPVRDIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTG---FPVNALTGHSYQGINVL  68

Query  88   LLWAEARLQGFTQDRWLTFNQAKKAGGHIRKGEHSTLAVLYKPMEREEQTESGQPVLDEN  147
            LLW  A  QGF  D WLT+ QA++ GGH+RKGE +T +V++KP+    +   G+ + DE+
Sbjct  69   LLWLSAAEQGFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHGELLRDEH  128

Query  148  GQPKVAHFGILRTHFLFNIEQTEGLET--FNETLLEAGPTA--PFlansaaenlllsTGA  203
            G+  +++  +++++ LFNI Q ++L +  +++  L +  TA   + A     ++L ++G 
Sbjct  129  GEVVMTEVPMIKANPLFNIAQCDDLPAHFYENRRLPGEETAGITLPATHRVLDILNASGV  188

Query  204  NIVHRSADEAFYHPIRDLIQLPTKAQFHDEGGYYATALHELTHWTGHHARLQREGVTSSC  263
            ++   + + A+Y P +D I +P  +QF+ +++Y AT LHEL H TGH +RL REG+TSS 
Sbjct  189  KVTSAAQNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLAREGITSSS  248

Query  264  -PFGSPGYAFEELIAEMGAAFLCAYAGIQGELRHEGYIDSWLSLLKADKRAIFRASGQAR  322
              FG P Y+FEEL+AEMG+AFLCA  +++GE+ HE+Y+DSWL +LK+DK+A+FRA+GQAR
Sbjct  249  LKFGDPLYSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDKKALFRAAGQAR  308

Query  323  SASEYVLNLE  332
             A E++LN+ 
Sbjct  309  QACEFLLNVA  318

65) PSF113_3295 in NC_016830


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  220 bits (821),  Expect = 7e-59, Method: Compositional matrix adjust.
 Identities = 133/306 (44%), Positives = 211/306 (69%), Gaps = 8/306 (2%)

Query  1    MRDIYQDVTDKIVTALDQGVAPWIKPWSSSGSACIGHQPYPINAITHRPYSGINLPLLWA  60
            +RDIYQ+VTD+IV+AL++G  PW +PW +S ++  G   +P+NA+T ++Y GIN+ LLW 
Sbjct  16   VRDIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTG---FPVNALTGHSYQGINVLLLWL  72

Query  61   EARLQGFTQDRWLTFNQAKKAGGHIRKGEHSTLAVLYKPMEREEQTESGQPVLDENGQPK  120
             A  QGF  D WLT+ QA++ GGH+RKGE +T +V++KP+    +   G+ + DE+G+  
Sbjct  73   SAAEQGFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHGELLRDEHGEVV  132

Query  121  VAHFGILRTHFLFNIEQteglem----lnetlleteQSDPFQPNSVAENLLLSSGARIVH  176
            +++  +++++ LFNI Q ++L            E   +  + +     ++L +SG ++  
Sbjct  133  MTEVPMIKANPLFNIAQCDDLPAHFYENRRLPGEETAGITLPATHRVLDILNASGVKVTS  192

Query  177  RPADEAFYHPIRDLIQLPTKAQFHDEGGYYATALHELTHWTGHHSRLQREGVTSAC-PFG  235
             + + A+Y P +D I +P  +QF+ +++Y AT LHEL H TGH SRL REG+TS+   FG
Sbjct  193  AAQNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLAREGITSSSLKFG  252

Query  236  SPGYAFEELIAEMGAAFLCAYAGIQGELRHEGYIDSWLGLLKADKRAIFRASGHARSASE  295
             P Y+FEEL+AEMG+AFLCA  +++GE+ HE+Y+DSWL +LK+DK+A+FRA+G+AR A E
Sbjct  253  DPLYSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDKKALFRAAGQARQACE  312

Query  296  YVLNLE  301
            ++LN+ 
Sbjct  313  FLLNVA  318

66) PARA_11700 in NC_015964


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  214 bits (796),  Expect = 6e-57, Method: Compositional matrix adjust.
 Identities = 126/306 (42%), Positives = 200/306 (66%), Gaps = 9/306 (2%)

Query  6    QPAKDLYQQITDQILEALEQGVMPWQRPW-DSGWPQMAIPCNGESGRQYSGINVLLLWMS  64
            +P +D+YQ++TD+I+ ALE+G  PW+RPW  S     ++P N+ +G+ Y GINVLLLW+S
Sbjct  14   KPVRDIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTGFPVNALTGHSYQGINVLLLWLS  73

Query  65   AIRKNFTQRKWVTFQGANHLGGQVRTGEKSTVIIFYKQNMFEEKDDSGNIVLDENGDPKM  124
            A  + F    W+T++ A++LGG+VR GE +T  +++K      KD  G+++ DE+G+  M
Sbjct  74   AAEQGFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHGELLRDEHGEVVM  133

Query  125  KSSVFIRGHHVFNIEQCEGLeky-----yeeypepeksseMQARPDLDVLPNKMGMQLYN  179
                 I+++ +FNI QC++L             E    +   ++  LD+L    G+++ +
Sbjct  134  TEVPMIKANPLFNIAQCDDLPAHFYENRRLPGEETAGITLPATHRVLDILNAS-GVKVTS  192

Query  180  KAQDRACYMPRKDCIVMPDFKKFNTADDYYATLLHECGHATGHKDRLNRDGVAKFD-KFG  238
             AQ+RA Y P +D IVMP   +F+   DY ATLLHE  H+TGH  RL R+G++    KFG
Sbjct  193  AAQNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLAREGITSSSLKFG  252

Query  239  SEQYAFEELIAELTSAFTCAHVNVCNNISQNAAYIEHWINALKADKKAIFRASSQAREAT  298
               Y+FEEL+AE+ SAF CA+++V  +++++ +Y++ W+  LK+DKKA+FRA++QAR+A 
Sbjct  253  DPLYSFEELVAEMGSAFLCAQLSVEGEVNHE-SYLDSWLRVLKSDKKALFRAAGQARQAC  311

Query  299  QFLLNA  304
            +FLLN 
Sbjct  312  EFLLNV  317

67) HIB_01280 in NC_016809


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  213 bits (793),  Expect = 1e-56, Method: Compositional matrix adjust.
 Identities = 125/306 (41%), Positives = 200/306 (66%), Gaps = 9/306 (2%)

Query  6    QPAKDLYQQITDQILEALEQGVMPWQKPW-DSGWPQMAIPCNGESGRQYSGINVLLLWMS  64
            +P +D+YQ++TD+I+ ALE+G  PW++PW  S     ++P N+ +G+ Y GINVLLLW+S
Sbjct  14   KPVRDIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTGFPVNALTGHSYQGINVLLLWLS  73

Query  65   AIRKNFTQRKWVTFQGANHLGGQVRTGEKSTVIIFYKQNMFEEKDDSGNIVLDENGDPKM  124
            A  + F    W+T++ A++LGG+VR GE +T  +++K      KD  G+++ DE+G+  M
Sbjct  74   AAEQGFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHGELLRDEHGEVVM  133

Query  125  KSSVFIRGHHVFNIEQCEGLeky-----yeeypepeksseMQARPDLDVLPNKMGMQLYN  179
                 I+++ +FNI QC++L             E    +   ++  LD+L    G+++ +
Sbjct  134  TEVPMIKANPLFNIAQCDDLPAHFYENRRLPGEETAGITLPATHRVLDILNAS-GVKVTS  192

Query  180  KAQDRACYMPRKDCIVMPDFKKFNTADDYYATLLHECGHATGHKDRLNRDGVAKFD-KFG  238
             AQ+RA Y P +D IVMP   +F+   DY ATLLHE  H+TGH  RL R+G++    KFG
Sbjct  193  AAQNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLAREGITSSSLKFG  252

Query  239  SEQYAFEELIAELTSAFTCAHVNVCNNISQNAAYIEHWINALKADKKAIFRASSQAREAT  298
               Y+FEEL+AE+ SAF CA+++V  +++++ +Y++ W+  LK+DKKA+FRA++QAR+A 
Sbjct  253  DPLYSFEELVAEMGSAFLCAQLSVEGEVNHE-SYLDSWLRVLKSDKKALFRAAGQARQAC  311

Query  299  QFLLNA  304
            +FLLN 
Sbjct  312  EFLLNV  317

68) traC in NC_007146


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  213 bits (793),  Expect = 1e-56, Method: Compositional matrix adjust.
 Identities = 125/306 (41%), Positives = 200/306 (66%), Gaps = 9/306 (2%)

Query  6    QPAKDLYQQITDQILEALEQGVMPWQKPW-DSGWPQMAIPCNGESGRQYSGINVLLLWMS  64
            +P +D+YQ++TD+I+ ALE+G  PW++PW  S     ++P N+ +G+ Y GINVLLLW+S
Sbjct  14   KPVRDIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTGFPVNALTGHSYQGINVLLLWLS  73

Query  65   AIRKNFTQRKWVTFQGANHLGGQVRTGEKSTVIIFYKQNMFEEKDDSGNIVLDENGDPKM  124
            A  + F    W+T++ A++LGG+VR GE +T  +++K      KD  G+++ DE+G+  M
Sbjct  74   AAEQGFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHGELLRDEHGEVVM  133

Query  125  KSSVFIRGHHVFNIEQCEGLeky-----yeeypepeksseMQARPDLDVLPNKMGMQLYN  179
                 I+++ +FNI QC++L             E    +   ++  LD+L    G+++ +
Sbjct  134  TEVPMIKANPLFNIAQCDDLPAHFYENRRLPGEETAGITLPATHRVLDILNAS-GVKVTS  192

Query  180  KAQDRACYMPRKDCIVMPDFKKFNTADDYYATLLHECGHATGHKDRLNRDGVAKFD-KFG  238
             AQ+RA Y P +D IVMP   +F+   DY ATLLHE  H+TGH  RL R+G++    KFG
Sbjct  193  AAQNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLAREGITSSSLKFG  252

Query  239  SEQYAFEELIAELTSAFTCAHVNVCNNISQNAAYIEHWINALKADKKAIFRASSQAREAT  298
               Y+FEEL+AE+ SAF CA+++V  +++++ +Y++ W+  LK+DKKA+FRA++QAR+A 
Sbjct  253  DPLYSFEELVAEMGSAFLCAQLSVEGEVNHE-SYLDSWLRVLKSDKKALFRAAGQARQAC  311

Query  299  QFLLNA  304
            +FLLN 
Sbjct  312  EFLLNV  317

69) traC in NC_002940


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  212 bits (790),  Expect = 2e-56, Method: Compositional matrix adjust.
 Identities = 125/303 (42%), Positives = 202/303 (67%), Gaps = 9/303 (2%)

Query  10   KDLYQQITDQIIDELKTGTMPWIRPWDNS-SPPMVIPCNGETGRHYSGINILLLWMSTMR  68
            +D+YQ++TD+I+  L  GT PW RPW  S +    +P N+ TG+ Y GIN+LLLW+S+  
Sbjct  17   RDIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTGFPVNALTGHSYQGINVLLLWLSAAE  76

Query  69   QKFTQRKWVTFQGAQHLGGKVRVGEKSTVIIFYKQTQLEETDDEGNVVFDENGEPKMKTS  128
            Q F    W+T++ AQ+LGG VR GE +T  +++K  ++   D +G+++ DE+GE  M   
Sbjct  77   QGFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHGELLRDEHGEVVMTEV  136

Query  129  IFIQGHHVFNIEQCDGLEKC---HETFPEHKPNPNKVARPE--LDELPINMGMQVYNRLQ  183
              I+++ +FNI QCD+L      +  +P +      ++  +  LD L  + G++V +  Q
Sbjct  137  PMIKANPLFNIAQCDDLPAHFYENRRLPGEETAGITLPATHRVLDILNAS-GVKVTSAAQ  195

Query  184  SKACYIPARDCIIMPDFKKFHSADDYYATLLHECGHATGHKDRLDRDGVTRFD-KFGSEQ  242
            ++A Y P++D I+MP   +F+   DY ATLLHE  H+TGH  RL R+G+T    KFG   
Sbjct  196  NRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLAREGITSSSLKFGDPL  255

Query  243  YAFEELIAELTSAFTCANVGVANNISQNAAYIDHWIQMLKSDKKAIFRASSQAREATQYL  302
            Y+FEEL+AE+ SAF CA+++V  +++++ +Y+D W+++LKSDKKA+FRA++QAR+A ++L
Sbjct  256  YSFEELVAEMGSAFLCAQLSVEGEVNHE-SYLDSWLRVLKSDKKALFRAAGQARQACEFL  314

Query  303  LDI  305
            L++
Sbjct  315  LNV  317

70) R2866_0565 in NC_017451


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  212 bits (789),  Expect = 2e-56, Method: Compositional matrix adjust.
 Identities = 125/306 (41%), Positives = 200/306 (66%), Gaps = 9/306 (2%)

Query  6    QPAKDLYQQITDQILEALEQGVMPWQKPW-DSRWPQMAIPCNGESGRQYSGINVLLLWMS  64
            +P +D+YQ++TD+I+ ALE+G  PW++PW  S     ++P N+ +G+ Y GINVLLLW+S
Sbjct  14   KPVRDIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTGFPVNALTGHSYQGINVLLLWLS  73

Query  65   AIRKNFTQRKWVTFQGANHLGGQVRTGEKSTVIIFYKQNMFEEKDDSGNVVLDENGDPKM  124
            A  + F    W+T++ A++LGG+VR GE +T  +++K      KD  G+++ DE+G+  M
Sbjct  74   AAEQGFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHGELLRDEHGEVVM  133

Query  125  KSSVFIRGHHVFNIEQCEGLeky-----yeefpepeksseMQARPDLDVLPNKMGMQLYN  179
                 I+++ +FNI QC++L             E    +   ++  LD+L    G+++ +
Sbjct  134  TEVPMIKANPLFNIAQCDDLPAHFYENRRLPGEETAGITLPATHRVLDILNAS-GVKVTS  192

Query  180  KAQDRACYMPRKDCIVMPDFKKFNTADDYYATLLHECGHATGHKDRLNRDGVAKFD-KFG  238
             AQ+RA Y P +D IVMP   +F+   DY ATLLHE  H+TGH  RL R+G++    KFG
Sbjct  193  AAQNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLAREGITSSSLKFG  252

Query  239  SEQYAFEELIAELTSAFTCAHVNVCNNISQNAAYIEHWINALKADKKAIFRASSQAREAT  298
               Y+FEEL+AE+ SAF CA+++V  +++++ +Y++ W+  LK+DKKA+FRA++QAR+A 
Sbjct  253  DPLYSFEELVAEMGSAFLCAQLSVEGEVNHE-SYLDSWLRVLKSDKKALFRAAGQARQAC  311

Query  299  QFLLNA  304
            +FLLN 
Sbjct  312  EFLLNV  317

71) HELO_4091 in NC_014532


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  211 bits (785),  Expect = 4e-56, Method: Compositional matrix adjust.
 Identities = 126/289 (44%), Positives = 195/289 (68%), Gaps = 7/289 (2%)

Query  3    DIYQAVTDRIVAQLEQGTIPWVKPWNRSGKPEPALTPRNAVTGRPYSGINIPLLWSAAVE  62
            DIYQ VTDRIVA LE+GT PW +PW  S     ++ P NA+TG++Y GIN+ LLW +A E
Sbjct  18   DIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTGF-PVNALTGHSYQGINVLLLWLSAAE  76

Query  63   SSYSQDRWLTFKQAKEAGGSVKKGETSTLACFYKPMKKPKLDDDGNQELDEEGNPKEERF  122
             +++ D WLT++QA++ GG V+KGE +T + ++KP+K P  D +G+   DE+G+      
Sbjct  77   QGFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHGELLRDEHGEVVMTEV  136

Query  123  AILRGFNLFNIDQCEGLPDEVVE----PGSSVEA-AFSPHEEAEHVMASSEVAIEHVEGN  177
            +++++  LFNI QC++LP +  E    PG    + ++++ +   +++ +S V +     N
Sbjct  137  PMIKANPLFNIAQCDDLPAHFYENRRLPGEETAGITLPATHRVLDILNASGVKVTSAAQN  196

Query  178  KAFYTPTLDRIRLPARHQFDLAERYYSTALHELVHSTGHQKRLAREGIVSFD-GFGSPSY  236
            +A+Y+P+ DRI +P   QFD    Y +T LHELVHSTGH  RLAREGI S    FG P Y
Sbjct  197  RAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLAREGITSSSLKFGDPLY  256

Query  237  AREELIAELGMAYLCGHLGIAGELQDASYIADWISELREDKRAIFKASG  285
            + EEL+AE+G A+LC++L++ GE+++ SY+  W+  L+ DK+A+F+A+G
Sbjct  257  SFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDKKALFRAAG  305

72) Pfl01_3033 in NC_007492


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  209 bits (779),  Expect = 1e-55, Method: Compositional matrix adjust.
 Identities = 137/307 (45%), Positives = 211/307 (69%), Gaps = 9/307 (2%)

Query  1    MRDIYQDVTDKIVTALEQGVAPWIKPWsssgsahvghhhPYPINAITRRPYSGINLPLLW  60
            +RDIYQ+VTD+IV+ALE+G  PW +PW +S ++       +P+NA+T ++Y GIN+ LLW
Sbjct  16   VRDIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGT----GFPVNALTGHSYQGINVLLLW  71

Query  61   AEARLQGFTQDRWLTFNQAKKAGGHIRKGEHSTLAVLYKPMEREEQTESGQPVLDENGQP  120
              A  QGF  D WLT+ QA++ GGH+RKGE +T +V++KP+    +   G+ + DE+G+ 
Sbjct  72   LSAAEQGFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHGELLRDEHGEV  131

Query  121  KVAHFGILKTHFLFNIEQteglet---lnetvletePSDPFLPNGAAE-NLLLRSGANII  176
             +++  ++K++ LFNI Q ++L +    N  +   E ++  LP      ++L  SG ++ 
Sbjct  132  VMTEVPMIKANPLFNIAQCDDLPAHFYENRRLPGEETAGITLPATHRVLDILNASGVKVT  191

Query  177  HRFADEAFYHPIRDLIQLPTKAQFHDQGGYYATALHELTHWTGHHTRLQREGVTSSC-PF  235
                + A+Y P +D I +P  +QF+ +++Y AT LHEL H TGH +RL REG+TSS   F
Sbjct  192  SAAQNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLAREGITSSSLKF  251

Query  236  GSPGYAFEELIAEMGAAFLCAYAGIQGELRHGGYIDSWLGLLKADKRAIFRASGQARSAS  295
            G P Y+FEEL+AEMG+AFLCA  +++GE+ H +Y+DSWL +LK+DK+A+FRA+GQAR A 
Sbjct  252  GDPLYSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDKKALFRAAGQARQAC  311

Query  296  EYVLNLE  302
            E++LN+ 
Sbjct  312  EFLLNVA  318

73) A464_4485 in NC_021870


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  207 bits (769),  Expect = 8e-55, Method: Compositional matrix adjust.
 Identities = 135/302 (45%), Positives = 203/302 (68%), Gaps = 13/302 (4%)

Query  6    DIYQKVTDQIIAELENGNVPWIRPWRDGEPP---FPINALSGRPYHGINVPLLWNSADKQ  62
            DIYQ VTD+I+A LE+G  PW RPWR +E     FP+NAL+G++Y+GINV LLW SA  Q
Sbjct  18   DIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTGFPVNALTGHSYQGINVLLLWLSAAEQ  77

Query  63   SFASDRWLTFHQVSALSGQVRRGEKSSLAVLYLPRTQEETDALGQPLLDKDGEPKVRHFG  122
            +F+ D WLT++Q   L+G+VR+GE ++ +V++ P      D  G+ L D +GE  + +  
Sbjct  78   GFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHGELLRDEHGEVVMTEVP  137

Query  123  IIREFRLFNLSQCDGLPQSLSEPFIRPAE---PVEMAET-----IAKNSGVTLRHRRQSK  174
            +I+   LFN++QCD+LP  + E    P+E    + ++ T     I + SGV +    Q++
Sbjct  138  MIKANPLFNIAQCDDLPAHFYENRRLPGEETAGITLPATHRVLDILNASGVKVTSAAQNR  197

Query  175  AYYKPATDLVMMPHPQQFESSEAYYATLLHELTHATGHASRLNRPGIAGAERTealy--a  232
            AYY P+ D ++MP + QF+ +  Y ATLLHEL H+TGH+SRL R GI+++    +    +
Sbjct  198  AYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLAREGITSSSLKFGDPLYS  257

Query  233  aeelvaeMGSAFLCAHCGIQGRLQHASYIGYWLDILRQDKRAVIRASGMARHASEWLLNA  292
             EELVAEMGSAFLCA+ +++G ++H SY++ WL +L+ DK+A++RA+G AR+A E LLN 
Sbjct  258  FEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDKKALFRAAGQARQACEFLLNV  317

Query  293  VP  294
             +
Sbjct  318  AA  319

74) A79E_4496 in NC_018522


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  206 bits (765),  Expect = 1e-54, Method: Compositional matrix adjust.
 Identities = 134/305 (44%), Positives = 201/305 (66%), Gaps = 19/305 (6%)

Query  6    DIYQKVTDQIIAELENGNVPWIRPWRDGEPP---FPINALSGRPYHGINVPLLWNSADKQ  62
            DIYQ VTD+I+A LE+G  PW RPWR +E     FP+NAL+G++Y+GINV LLW SA  Q
Sbjct  18   DIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTGFPVNALTGHSYQGINVLLLWLSAAEQ  77

Query  63   SFASDRWLTFHQVSALGAQVRRGEKSSLAVLYLPRTQEETDALGQPLLDENGEPQVRHFG  122
            +F+ D WLT++Q   LG++VR+GE ++ +V++ P      D  G+ L DE+GE  + +  
Sbjct  78   GFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHGELLRDEHGEVVMTEVP  137

Query  123  IIREFRLFNLSQCDGLPQTLSEPFTRPAEPVETAEAIAM-----------NSGVTLHHRR  171
            +I+   LFN++QCD+LP  +   +     P E + +I++            SGV +    
Sbjct  138  MIKANPLFNIAQCDDLPAHF---YENRRLPGEETAGITLPATHRVLDILNASGVKVTSAA  194

Query  172  QSKAYYKPATDLVMMPHPQQFESSEAYYATLLHELTHATGHASRLNRPGIAGTERTealy  231
            Q++AYY P+ D ++MP + QF+ +  Y ATLLHEL H+TGH+SRL R GI+++    +  
Sbjct  195  QNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLAREGITSSSLKFGDP  254

Query  232  --aaeelvaeMGSAFLCAHCGILGRLQHASYIGYWLDILRQDKRAVIRASGMARHASEWL  289
              + EELVAEMGSAFLCA+ ++ G ++H SY++ WL +L+ DK+A++RA+G AR+A E L
Sbjct  255  LYSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDKKALFRAAGQARQACEFL  314

Query  290  LNAVP  294
            LN  +
Sbjct  315  LNVAA  319

75) KP1_0590 in NC_012731


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  206 bits (765),  Expect = 2e-54, Method: Compositional matrix adjust.
 Identities = 134/305 (44%), Positives = 201/305 (66%), Gaps = 19/305 (6%)

Query  38   DIYQKVTDQIIAELENGNVPWIRPWRDGEPP---FPINALSGRPYHGINVPLLWNSADKQ  94
            DIYQ VTD+I+A LE+G  PW RPWR +E     FP+NAL+G++Y+GINV LLW SA  Q
Sbjct  18   DIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTGFPVNALTGHSYQGINVLLLWLSAAEQ  77

Query  95   SFASDRWLTFHQVSALGAQVRRGEKSSLAVLYLPRTQEETDALGQPLLDENGEPQVRHFG  154
            +F+ D WLT++Q   LG++VR+GE ++ +V++ P      D  G+ L DE+GE  + +  
Sbjct  78   GFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHGELLRDEHGEVVMTEVP  137

Query  155  IIREFRLFNLSQCDGLPQTLSEPFTRPAEPVETAEAIAM-----------NSGVTLHHRR  203
            +I+   LFN++QCD+LP  +   +     P E + +I++            SGV +    
Sbjct  138  MIKANPLFNIAQCDDLPAHF---YENRRLPGEETAGITLPATHRVLDILNASGVKVTSAA  194

Query  204  QSKAYYKPATDLVMMPHPQQFESSEAYYATLLHELTHATGHASRLNRPGIAGTERTealy  263
            Q++AYY P+ D ++MP + QF+ +  Y ATLLHEL H+TGH+SRL R GI+++    +  
Sbjct  195  QNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLAREGITSSSLKFGDP  254

Query  264  --aaeelvaeMGSAFLCAHCGILGRLQHASYIGYWLDILRQDKRAVIRASGMARHASEWL  321
              + EELVAEMGSAFLCA+ ++ G ++H SY++ WL +L+ DK+A++RA+G AR+A E L
Sbjct  255  LYSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDKKALFRAAGQARQACEFL  314

Query  322  LNAVP  326
            LN  +
Sbjct  315  LNVAA  319

76) ArdC in NC_006154


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  195 bits (724),  Expect = 3e-51, Method: Compositional matrix adjust.
 Identities = 133/319 (42%), Positives = 205/319 (65%), Gaps = 24/319 (7%)

Query  29   SNTKWSKGKKAPTQDLYQTVTDSIIEALEAGVKPWVCPWQRVNGM-SGIPANYTTGATYS  87
            S+ K+  +   P +D+YQ VTD I+ ALE G +PW  PW+  +G  +G+P N  TG +Y 
Sbjct  4    SDRKRRPAADKPVRDIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTGFPVNALTGHSYQ  63

Query  88   GINIMLLWASASKQGFTDGRWLTYKQAEAKGAQVRKGEKGTTAIFYKTL---EKE-----  139
            GIN++LLW SA+ QGF  + WLTY+QA+  G++VRKGE +T ++++K +    K+     
Sbjct  64   GINVLLLWLSAAEQGFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHGEL  123

Query  140  --DEQGET--TKIPMLKTFTVFNVQQIDGLPLETAEQETSPIAEPT--TFESLPRVEALI  193
              DE+GE   T +PM+K+  +FN+ Q D+LP +  E+   P  E +  T+ +  RV  ++
Sbjct  124  LRDEHGEVVMTEVPMIKANPLFNIAQCDDLPAHFYENRRLPGEETAGITLPATHRVLDIL  183

Query  194  QQCGATIIERGQA-AYFRPSTDEIVLPERHLFDDAANFYATALHELTHWTGGKTRLNRDM  252
            +  G  +   +Q  AY+ PS D IV+P    FD  A++ AT LHEL H TG  +RL R+ 
Sbjct  184  NASGVKVTSAAQNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLARE-  242

Query  253  RGV------FGNASYAFEELIAELGSAFLMADFGVVGDVQHESYIASWLNALKNDKRFIF  306
             G+      FG++ Y+FEEL+AE+GSAFL A+++V G+V+HESY+ SWL  LK+DK+ +F
Sbjct  243  -GITSSSLKFGDPLYSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDKKALF  301

Query  307  kaassaskaHQFLIASNSA  325
            +AA+ A +A +FL+   ++
Sbjct  302  RAAGQARQACEFLLNVAAS  320

77) Meso_3793 in NC_008254


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  194 bits (720),  Expect = 6e-51, Method: Compositional matrix adjust.
 Identities = 126/311 (41%), Positives = 196/311 (64%), Gaps = 22/311 (7%)

Query  4    DVYERITSRIVAELEQGVRPWLKPWSAEHAAGRITRPLRSNGMPYQGINVLMLWGEAVAK  63
            D+Y+ +T RIVA LE+G RPW +PW + +++G         G +YQGINVL+LW  A  +
Sbjct  18   DIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTGFPVNALTGHSYQGINVLLLWLSAAEQ  77

Query  64   GFAAPIWMTFRQAQELGGHVRKGEHGS-LVVY-ADRISRTERD-----EATGEEAEREIP  116
            GF+  IW+T+RQAQ+LGGHVRKGE ++  V++ + +++  +R+     +  GE    E+P
Sbjct  78   GFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHGELLRDEHGEVVMTEVP  137

Query  117  FLKGYTVFNVEQVEGLPQHFYAVAEPRL---EEVARNVQAD----AFFVATHADIRHGG-  168
             +K+  +FN+ Q ++LP HFY   + RL   E  +  + A      ++ A+   +  ++ 
Sbjct  138  MIKANPLFNIAQCDDLPAHFY--ENRRLPGEETAGITLPATHRVLDILNASGVKVTSAAQ  195

Query  169  DRAYYTMAEDRVQMPPFEAFRDAESYYATLAHELTHWTRHPLRLERE---FGRKRWGDEG  225
            +RAYY+ ++DR+ MP    F     Y ATL HEL H T HP RL RE    +  + GD  
Sbjct  196  NRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLAREGITSSSLKFGDPL  255

Query  226  YAMEELVAELGAAFLSADLGLTPEPRADHAAYIGSWLEVLKNDKRAIFAAASHAQRAADF  285
            Y+ EELVAE+G+AFL A+L++  E   +H +Y++SWL VLK+DK+A+F AA++A++A +F
Sbjct  256  YSFEELVAEMGSAFLCAQLSVEGE--VNHESYLDSWLRVLKSDKKALFRAAGQARQACEF  313

Query  286  LHGLQAGRQVE  296
            L  + A+RQ  
Sbjct  314  LLNVAASRQAA  324

78) VF_B0002 in NC_006842


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  193 bits (717),  Expect = 1e-50, Method: Compositional matrix adjust.
 Identities = 127/316 (41%), Positives = 203/316 (65%), Gaps = 24/316 (7%)

Query  35   KKRSFGKKRAVVKVSKDIYQMVTDRVIAALENGVKPWVCPWDKTNECSM-LPMNFKTKTN  93
            KK    ++ A  K  +DIYQ VTDR++AALE+G +PW  PW  ++  +  +P+N  T  +
Sbjct  2    KKSDRKRRPAADKPVRDIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTGFPVNALTGHS  61

Query  94   YSGINILLLWSETVEKGFTSPYWLTYKQANELGGNVMKGQKGTTIVYYK-----NWEKED  148
            Y GIN+LLLW  + E+GF    WLTY+QA++LGG+V KG+ +T  V +K       ++++
Sbjct  62   YQGINVLLLWLSAAEQGFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHG  121

Query  149  E---EGNKEVI----PMLRTFTVFNIDQVENI-----EKPMVTVKETREKSEFVKLSYVE  196
            E   + + EV+    PM+++  +FNI Q +++     E+  +   ET   + +     V 
Sbjct  122  ELLRDEHGEVVMTEVPMIKANPLFNIAQCDDLPAHFYENRRLPGEETAGIT-LPATHRVL  180

Query  197  EAIHNTEIKINHCG-VRAFYSPAHDEITLPMVDRFNSSSDYYATAWHELVHATGHKSRLD  255
            + ++ + +K+   +  RA+YSP++D I +P+  +F+ ++DY AT  HELVH+TGH SRL 
Sbjct  181  DILNASGVKVTSAAQNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLA  240

Query  256  RDLKNS----FGSKDYAFEELIAELGAAFCCADLGIVGEVQHESYIVSWLERLNGDKKFI  311
            R+   S    FG   Y+FEEL+AE+G+AF CA+L++ GEV+HESY+ SWL  L++DKK +
Sbjct  241  REGITSSSLKFGDPLYSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDKKAL  300

Query  312  FKAASQASKAHQWLLK  327
            F+AA+QA +A + LL+
Sbjct  301  FRAAGQARQACEFLLN  316

79) Sbal223_4401 in NC_011664


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  192 bits (711),  Expect = 3e-50, Method: Compositional matrix adjust.
 Identities = 121/301 (41%), Positives = 200/301 (67%), Gaps = 24/301 (7%)

Query  49   DMYQVVTDQIIAALDKGVKPWVCPWQR-NSIGAGLPINFDTKKAYSGINVLLLWAAAFDA  107
            D+YQ VTD+I+AAL+KG +PW  PW+  ++ G+G+P+N  T  +Y GINVLLLW +A + 
Sbjct  18   DIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTGFPVNALTGHSYQGINVLLLWLSAAEQ  77

Query  108  GFSSNQFLTYNQANNLGGQVRKGEKGTSIIFYKS------------LEKENEQGEKEVIP  155
            GF+ +  LTY QA++LGG+VRKGE +T+ +++K+            L  E+ +     +P
Sbjct  78   GFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHGELLRDEHGEVVMTEVP  137

Query  156  MLKSFTVFNVEQIDGLNVE--EVKGFNVNNS----FDAIDHVESFINKTGANIVEQG-DK  208
            M+K+  +FN+ Q D+L  +  E + +  +++    + A ++V  ++N +G ++   + ++
Sbjct  138  MIKANPLFNIAQCDDLPAHFYENRRLPGEETAGITLPATHRVLDILNASGVKVTSAAQNR  197

Query  209  AFFRPSTDNIVLPTRERFSNSLDFYCTALHELTHWTGAKSRLDR--IKGS--RFGSDDYA  264
            A++ PS D IV+P   +F  + D+  T LHEL H TG  SRL R  I +S  +FG   Y+
Sbjct  198  AYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLAREGITSSSLKFGDPLYS  257

Query  265  FEELIAELGASFLMAELNVSGDVQHESYIASWLTQLKNDKRYIFKAASAASKAHQYLMQV  324
            FEEL+AE+G++FL A+L+V G+V+HESY+ SWL  LK+DK+ +F+AA+ A +A ++L++V
Sbjct  258  FEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDKKALFRAAGQARQACEFLLNV  317

Query  325  T  325
            +
Sbjct  318  A  318

80) mlr6154 in NC_002678


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  191 bits (708),  Expect = 5e-50, Method: Compositional matrix adjust.
 Identities = 129/307 (43%), Positives = 198/307 (65%), Gaps = 19/307 (6%)

Query  25   LYQEITDRIIAELERGTVPWVKPW-GSAKADLGLPSNAATGRRYSGINILILWGAVIERS  83
            +YQE+TDRI+A LE+GT PW +PW  S  ++ G+P NA TG+ Y GIN+L+LW +  E++
Sbjct  19   IYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTGFPVNALTGHSYQGINVLLLWLSAAEQG  78

Query  84   YPGQNWLTFRQALALGGNVRKGERGTTIV--HADRFVPK---GEQERAKTDGDEPQAVPY  138
            +  + WLT+RQA  LGG+VRKGE +T  V   + +  +K   GE  R   +      VP 
Sbjct  79   FGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHGELLRDEHGEVVMTEVPM  138

Query  139  LKRFTVFNVAQCDGLPEHLYGNAEPLPEREI----VPQAE---ALIRASGADFRIGG-DR  190
            +K   +FN+AQCD+LP H+Y N   LP  E     +P ++    ++ ASG     ++ +R
Sbjct  139  IKANPLFNIAQCDDLPAHFYEN-RRLPGEETAGITLPATHRVLDILNASGVKVTSAAQNR  197

Query  191  AFYMPGSDSIQVPPQPAFFQQIDYYRTCFHELGHWTGHPARLARD-LSGA---FGSKTYA  246
            A+Y P+ D I +P  + F ++ DY  T +HEL H TGHP+RLAR+ ++++   FG   Y+
Sbjct  198  AYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLAREGITSSSLKFGDPLYS  257

Query  247  REELVAEITAAFVCSTLGIEPTVRHADYIGTWLKVLREDNRAIFRAASLASKAADFLLGF  306
             EELVAE+ +AF+C+ L++E  V H  Y+++WL+VL+ D++A+FRAA+ A +A +FLL  
Sbjct  258  FEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDKKALFRAAGQARQACEFLLNV  317

Query  307  NAEAEGA  313
             A  ++A
Sbjct  318  AASRQAA  324

81) KPK_1837 in NC_011283


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  191 bits (708),  Expect = 5e-50, Method: Compositional matrix adjust.
 Identities = 128/308 (42%), Positives = 195/308 (64%), Gaps = 23/308 (7%)

Query  30   KTKGVKNRTDIYQTVTDSIIEALEAGVKPWSCPWKRVPGM-SGLPVNYATDVAYSGMNIM  88
            +  + K   DIYQ VTD I+ ALE G +PW  PW+   G  +G+PVN  T+ +Y G+N++
Sbjct  9    RPAADKPVRDIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTGFPVNALTGHSYQGINVL  68

Query  89   LLWCSASIQGFSDSRWMTYKQSQAAGGQVRKGERGTTAIFYTT------------LEKEN  136
            LLW SA+ QGF+   W+TY+Q+Q  GG+VRKGE +T ++++              L  E+
Sbjct  69   LLWLSAAEQGFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHGELLRDEH  128

Query  137  DEGETEHIPMLKTFTVFNVDQIDGLPA-----TDETGAEAPAATFDPLPQAEALFSRSGA  191
            +E    ++PM+K+  +FN+ Q D+LPA         G E+++ T+ +  +   +++ SG 
Sbjct  129  GEVVMTEVPMIKANPLFNIAQCDDLPAHFYENRRLPGEETAGITLPATHRVLDILNASGV  188

Query  192  KIIEKGQN-AFFMPTTDEIWLPERHLFNDAANFYATGLHELVHWTGAKARLNREMKD---  247
            K+   +QN A++ P+ D I +P    F+  A++ AT LHELVH TG  +RL RE      
Sbjct  189  KVTSAAQNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLAREGITSSS  248

Query  248  -RFGSECYAFEELCAELGSAFLMADLSIEGEVQHESYIASWLKALKNDKRYIFRAASAAS  306
             +FG   Y+FEEL AE+GSAFL A+LS+EGEV+HESY+ SWL+ LK+DK+ +FRAA+ A 
Sbjct  249  LKFGDPLYSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDKKALFRAAGQAR  308

Query  307  KAHRYLMD  314
            +A  +L++
Sbjct  309  QACEFLLN  316

82) ardC in NC_014500


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  190 bits (705),  Expect = 1e-49, Method: Compositional matrix adjust.
 Identities = 122/299 (41%), Positives = 189/299 (64%), Gaps = 25/299 (8%)

Query  66   DIYQTVTDSIITALEAGVKPWTCPWQRVPGM-SGLPSNFATGIAYSGMNIMLLWCSASEQ  124
            DIYQ VTD I++ALE G +PW  PW+   G  +G+P N  TG +Y G+N++LLW SA+EQ
Sbjct  18   DIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTGFPVNALTGHSYQGINVLLLWLSAAEQ  77

Query  125  GFGDSRWMTYKQAQAVGGQVRKGEHGTTAIFYTT------------LEKENEDGEIDHIP  172
            GFG   W+TY+QAQ +GG+VRKGE +T ++++              L  E+ +  + ++P
Sbjct  78   GFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHGELLRDEHGEVVMTEVP  137

Query  173  MLKTFTVFNVEQIDGLPLT-------TEADSPTETFEPLPQAENLFRRSGARIIEKGQN-  224
            M+K+  +FN+ Q D+LP            +++  T+ +  +  +++  SG ++   +QN 
Sbjct  138  MIKANPLFNIAQCDDLPAHFYENRRLPGEETAGITLPATHRVLDILNASGVKVTSAAQNR  197

Query  225  AFFKPSTDEVWLPERHLFSDAANFYATGLHELVHWSGAKTRLNREMKG----KFGSDEYV  280
            A++ PS D + +P    F   A++ AT LHELVH +G  +RL RE       KFG   Y 
Sbjct  198  AYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLAREGITSSSLKFGDPLYS  257

Query  281  FEELIAELGSAFLMADLGIVGEVQHESYIASWLKALKNDKRYIFKAASAASKAHRYLMD  339
            FEEL+AE+GSAFL A+L++ GEV+HESY+ SWL+ LK+DK+ +F+AA+ A +A  +L++
Sbjct  258  FEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDKKALFRAAGQARQACEFLLN  316

83) SeSA_B0128 in NC_011092


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  189 bits (702),  Expect = 2e-49, Method: Compositional matrix adjust.
 Identities = 130/299 (44%), Positives = 193/299 (65%), Gaps = 28/299 (9%)

Query  35   RGKSKARAGAVKT--DLYQTVTDSIIAALESGVKPWVCPW-VRNGAAVGLPANFSTGTTY  91
            ++  K R++A K   D+YQ VTD I+AALE G +PW  PW   +G++ G+P N  TG +Y
Sbjct  3    KSDRKRRPAADKPVRDIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTGFPVNALTGHSY  62

Query  92   SGINIMLLWCSAAKQGFQDERWLTYKQAQELGGQVRKGEHGTTAIFYKT-----------  140
             GIN++LLW SAA QGF  + WLTY+QAQ+LGG+VRKGE +T ++++K            
Sbjct  63   QGINVLLLWLSAAEQGFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHGE  122

Query  141  -LekededgeiekiPMLKAFTVFNVEQIDGLSIE-----SVPQPVAGFDPLPQAE---AL  191
             L  E+ +  +  +PM+KA  +FN+ Q D+L+ +      +P   ++   LP ++    +
Sbjct  123  LLRDEHGEVVMTEVPMIKANPLFNIAQCDDLPAHFYENRRLPGEETAGITLPATHRVLDI  182

Query  192  MTRSGAKITEQG-VKAFYRPATDEIVLPERFRFADAANFYATGLHELVHWTGAASRLNRE  250
            +  SG K+T  +  +A+Y P+ D IV+P   +F   A++ AT LHELVH TG +SRL RE
Sbjct  183  LNASGVKVTSAAQNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLARE  242

Query  251  ----KGNKFGSEAYAFEELIAELGSAFLLADLGITGEVQHESYIASWLKALKGDKRYIF  305
                 + KFG   Y+FEEL+AE+GSAFL A+L++ GEV+HESY+ SWL+ LK+DK+ +F
Sbjct  243  GITSSSLKFGDPLYSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDKKALF  301

84) Dd1591_1473 in NC_012912


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  188 bits (698),  Expect = 3e-49, Method: Compositional matrix adjust.
 Identities = 124/300 (42%), Positives = 190/300 (64%), Gaps = 27/300 (9%)

Query  39   DIYQTVTDSIIAALEAGVKPWTCPWQRVPGM-SGLPSNFATGIAYSGMNIMLLWCSASEQ  97
            DIYQ VTD I+AALE G +PW  PW+   G  +G+P N  TG +Y G+N++LLW SA+EQ
Sbjct  18   DIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTGFPVNALTGHSYQGINVLLLWLSAAEQ  77

Query  98   GFGDSRWMTYKQAQAVGGQVRKGEHGTTAIFYTT------------LEKENEDGEIDQIP  145
            GFG   W+TY+QAQ +GG+VRKGE +T ++++              L  E+ +  + ++P
Sbjct  78   GFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHGELLRDEHGEVVMTEVP  137

Query  146  MLKTFTVFNVEQIDGLT--------LTTEAVSPAETFEPLPPAENLFRRSGARIIEKGQN  197
            M+K+  +FN+ Q D+L         L  E  +++ T+ +     +++  SG ++   +QN
Sbjct  138  MIKANPLFNIAQCDDLPAHFYENRRLPGEE-TAGITLPATHRVLDILNASGVKVTSAAQN  196

Query  198  -AFFKPSTDEVWLPERHLFSDAANFYATGLHELVHWSGAKTRLNREMKG----KFGSEGY  252
             A++ PS D + +P    F   A++ AT LHELVH +G  +RL RE       KFG   Y
Sbjct  197  RAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLAREGITSSSLKFGDPLY  256

Query  253  AFEELIAELGSAFLMADLGIVGEVQHESYIASWLKALKNDKRYIFKAASAASKAHRYLMD  312
            +FEEL+AE+GSAFL A+L++ GEV+HESY+ SWL+ LK+DK+ +F+AA+ A +A  +L++
Sbjct  257  SFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDKKALFRAAGQARQACEFLLN  316

85) KPK_1761 in NC_011283


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  185 bits (686),  Expect = 3e-48, Method: Compositional matrix adjust.
 Identities = 123/304 (41%), Positives = 194/304 (64%), Gaps = 25/304 (8%)

Query  34   SKAKTDIYQTVTNNIIATLEAGVKPWSCPWKRVPGM-SGLPSNFATGIAYSGMNIMLLWC  92
             K+  DIYQ VT+ I+A+LE G +PW  PW+   G  +G+P N  TG +Y G+N++LLW 
Sbjct  13   DKPVRDIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTGFPVNALTGHSYQGINVLLLWL  72

Query  93   SASKQGFGDSRWMTYKQAQAIGGQVRKGEHGTTAIFYKT------------LEKENEDGD  140
            SA+ QGFG   W+TY+QAQ +GG+VRKGE +T ++++K             L  E+ +  
Sbjct  73   SAAEQGFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHGELLRDEHGEVV  132

Query  141  IDQIPMLKTFNVFNVEQIDGLLL----TTEIVSPEATFDPLPEAE---NLFQKSGANIIE  193
            + ++PM+K+  +FN+ Q D+L         + + E++   LP ++   ++++ SG ++  
Sbjct  133  MTEVPMIKANPLFNIAQCDDLPAHFYENRRLPGEETAGITLPATHRVLDILNASGVKVTS  192

Query  194  KGQN-AFFQPSTDEVWLPERHLFSAAANFYATGLHELVHWSGGKKRLNREMKG----KFG  248
             +QN A++ PS D + +P    F   A++ AT LHELVH +G   RL RE       KFG
Sbjct  193  AAQNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLAREGITSSSLKFG  252

Query  249  SADYAEEELVAELGSAFLMADLGIVGEVQHESYIASWLKALKNDKRYVFKAASEASKAHR  308
             + Y+ EELVAE+GSAFL A+L++ GEV+HESY+ SWL+ LK+DK+ +F+AA++A +A  
Sbjct  253  DPLYSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDKKALFRAAGQARQACE  312

Query  309  YLMD  312
            +L++
Sbjct  313  FLLN  316

86) Sbal223_4521 in NC_011665


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  184 bits (684),  Expect = 4e-48, Method: Compositional matrix adjust.
 Identities = 124/300 (42%), Positives = 191/300 (64%), Gaps = 24/300 (8%)

Query  49   DMYEAVTNKIIEALEKGVKPWVCPW-VKSSRGNGLPINFDTKKSYSGINVCLLWFAAFEA  107
            D+Y+ VT++I+ ALEKG +PW  PW    + G G+P+N  T  SY GINV LLW++A E 
Sbjct  18   DIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTGFPVNALTGHSYQGINVLLLWLSAAEQ  77

Query  108  GFTSNQFLTYKQAQSLGAQVRKGEKGTNIIYYTN------------WEKENAEGEKENIP  155
            GF  +  LTY+QAQ LG++VRKGE +TN + +                 E++E    ++P
Sbjct  78   GFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHGELLRDEHGEVVMTEVP  137

Query  156  MIKSFTVFNIEQIEGL-----NIPEVAAIEEGSI-FESLDHVEIFLKNTGAKITEQGAS-  208
            MIK+  +FNI Q ++L     +   +++ E ++I + + ++V  +L+ +G K+T  + + 
Sbjct  138  MIKANPLFNIAQCDDLPAHFYENRRLPGEETAGITLPATHRVLDILNASGVKVTSAAQNR  197

Query  209  AFYRPSTDSITMPSRGRFSNHCDFYATALHELTHWTGAKHRLDR--IKGS--RFGSDDYA  264
            A+Y PS D I MP  ++F  + D+ AT LHEL H TG   RL R  I +S  +FG   Y+
Sbjct  198  AYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLAREGITSSSLKFGDPLYS  257

Query  265  FEELIAEIGASFLMAELNVGGDVQHESYIASWLDRLKGDKRYVFKAASAASKAHQFLMGT  324
            FEEL+AE+G++FL A+L+V G+V+HESY+ SWL  LK+DK+ +F+AA+ A +A +FL+  
Sbjct  258  FEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDKKALFRAAGQARQACEFLLNV  317

87) Sbal223_4417 in NC_011668


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  184 bits (684),  Expect = 5e-48, Method: Compositional matrix adjust.
 Identities = 124/300 (42%), Positives = 191/300 (64%), Gaps = 24/300 (8%)

Query  49   DMYEAVTNKIIEALEKGVKPWVCPW-VKSSRGNGLPINFDTKKSYSGINVCLLWFAAFEA  107
            D+Y+ VT++I+ ALEKG +PW  PW    + G G+P+N  T  SY GINV LLW++A E 
Sbjct  18   DIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTGFPVNALTGHSYQGINVLLLWLSAAEQ  77

Query  108  GFTSNQFLTYKQAQSLGAQVRKGEKGTNIIYYTN------------WEKENAEGEKENIP  155
            GF  +  LTY+QAQ LG++VRKGE +TN + +                 E++E    ++P
Sbjct  78   GFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHGELLRDEHGEVVMTEVP  137

Query  156  MIKSFTVFNIEQIEGL-----NIPEVAAIEEGSI-FESLDHVEIFLKNTGAKITEQGAS-  208
            MIK+  +FNI Q ++L     +   +++ E ++I + + ++V  +L+ +G K+T  + + 
Sbjct  138  MIKANPLFNIAQCDDLPAHFYENRRLPGEETAGITLPATHRVLDILNASGVKVTSAAQNR  197

Query  209  AFYRPSTDSITMPSRGRFSNHCDFYATALHELTHWTGAKHRLDR--IKGS--RFGSDDYA  264
            A+Y PS D I MP  ++F  + D+ AT LHEL H TG   RL R  I +S  +FG   Y+
Sbjct  198  AYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLAREGITSSSLKFGDPLYS  257

Query  265  FEELIAEIGASFLMAELNVGGDVQHESYIASWLDRLKGDKRYVFKAASAASKAHQFLMGT  324
            FEEL+AE+G++FL A+L+V G+V+HESY+ SWL  LK+DK+ +F+AA+ A +A +FL+  
Sbjct  258  FEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDKKALFRAAGQARQACEFLLNV  317

88) ECED1_2276 in NC_011745


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  184 bits (683),  Expect = 6e-48, Method: Compositional matrix adjust.
 Identities = 126/305 (42%), Positives = 189/305 (62%), Gaps = 27/305 (8%)

Query  68   SKTRTDIYQTVTDSIIAALEAGVKPWSCPWLRVSGM-SGLPSNYATGTAYSGMNIMLLWC  126
             K   DIYQ VTD I+AALE G +PW  PW    G  +G+P N  TG +Y G+N++LLW 
Sbjct  13   DKPVRDIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTGFPVNALTGHSYQGINVLLLWL  72

Query  127  SASKQGFSDSRWMTYKQAQAAGGQVRKGEHGTTAIFYTT------------LEKENDAGE  174
            SA+ QGF+   W+TY+QAQ  GG+VRKGE +T ++++              L  E++   
Sbjct  73   SAAEQGFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHGELLRDEHGEVV  132

Query  175  VEQIPMLKTFTVFNVQQIDGLP--------LTTETVSPEATFNPLPQAENLLRKSGANII  226
            + ++PM+K+  +FN+ Q D+LP        L  E  ++  T+ +  +  ++L  SG ++ 
Sbjct  133  MTEVPMIKANPLFNIAQCDDLPAHFYENRRLPGEE-TAGITLPATHRVLDILNASGVKVT  191

Query  227  EKGQN-AFFSPSTDEVWLPERHLFSDAANFYATGLHELVHWSGGKKRLNREMKG----KF  281
              +QN A++SPS D + +P    F   A++ AT LHELVH +G   RL RE       KF
Sbjct  192  SAAQNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLAREGITSSSLKF  251

Query  282  GSADYAEEELVAELGSAFLMADLGIEGEVQHESYIASWLKALKNDKRYIFKAVSAASKAH  341
            G + Y+ EELVAE+GSAFL A+L++EGEV+HESY+ SWL+ LK+DK+ +F+A + A +A 
Sbjct  252  GDPLYSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDKKALFRAAGQARQAC  311

Query  342  SYLMD  346
             +L++
Sbjct  312  EFLLN  316

89) Sbal175_4395 in NC_017572


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  184 bits (681),  Expect = 9e-48, Method: Compositional matrix adjust.
 Identities = 123/300 (41%), Positives = 190/300 (64%), Gaps = 24/300 (8%)

Query  49   DMYEAVTNKIIEVLEKGVKPWVCPW-VKSSRGNGLPINFDTKKSYSGINVCLLWFAAFEA  107
            D+Y+ VT++I+  LEKG +PW  PW    + G G+P+N  T  SY GINV LLW++A E 
Sbjct  18   DIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTGFPVNALTGHSYQGINVLLLWLSAAEQ  77

Query  108  GFTSNQFLTYKQAQSLGAQVRKGEKGTNIIYYTN------------WEKENAEGEKENIP  155
            GF  +  LTY+QAQ LG++VRKGE +TN + +                 E++E    ++P
Sbjct  78   GFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHGELLRDEHGEVVMTEVP  137

Query  156  MIKSFTVFNIEQIEGL-----NIPEVAAIEEGSI-FESLDHVEIFLKNTGAKITEQGAS-  208
            MIK+  +FNI Q ++L     +   +++ E ++I + + ++V  +L+ +G K+T  + + 
Sbjct  138  MIKANPLFNIAQCDDLPAHFYENRRLPGEETAGITLPATHRVLDILNASGVKVTSAAQNR  197

Query  209  AFYRPSTDSITMPSRGRFSNHCDFYATALHELTHWTGAKHRLDR--IKGS--RFGSDDYA  264
            A+Y PS D I MP  ++F  + D+ AT LHEL H TG   RL R  I +S  +FG   Y+
Sbjct  198  AYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLAREGITSSSLKFGDPLYS  257

Query  265  FEELIAEIGASFLMAELNVGGDVQHESYIASWLDRLKGDKRYVFKAASAASKAHQFLMGT  324
            FEEL+AE+G++FL A+L+V G+V+HESY+ SWL  LK+DK+ +F+AA+ A +A +FL+  
Sbjct  258  FEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDKKALFRAAGQARQACEFLLNV  317

90) KOX_24630 in NC_016612


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  183 bits (678),  Expect = 1e-47, Method: Compositional matrix adjust.
 Identities = 123/305 (41%), Positives = 189/305 (62%), Gaps = 27/305 (8%)

Query  35   SKTRTDIYQTVTENIIVALEAGVKPWSCPWKRVSGM-SGLPSNYATGTAYSGINIMLLWC  93
             K   DIYQ VT+ I+ ALE G +PW  PW+   G  +G+P N  TG +Y GIN++LLW 
Sbjct  13   DKPVRDIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTGFPVNALTGHSYQGINVLLLWL  72

Query  94   SASKQGFSDSRWMTYKQAQAASGQVRKGEHGTTAIFYTT------------LEKENDAGD  141
            SA+ QGF+   W+TY+QAQ  +G+VRKGE +T ++++              L  E++   
Sbjct  73   SAAEQGFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHGELLRDEHGEVV  132

Query  142  VEHIPMLKTFTVFNVQQIDGLP--------LTTETGSPEATFGPVPQAENLLRKSGANII  193
            + ++PM+K+  +FN+ Q D+LP        L  E  ++  T+ +  +  ++L  SG ++ 
Sbjct  133  MTEVPMIKANPLFNIAQCDDLPAHFYENRRLPGE-ETAGITLPATHRVLDILNASGVKVT  191

Query  194  EKGQN-AFFSPSTDEVWLPERHLFSDAANFYATGLHELVHWSGGKKHLNRKMKG----KF  248
              +QN A++SPS D + +P    F   A++ AT LHELVH +G   +L R        KF
Sbjct  192  SAAQNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLAREGITSSSLKF  251

Query  249  GSADYAEEELVAELGSAFLMADLGIEGEVQHESYIASWLKALKNDKRYIFKAASAASKAH  308
            G + Y+ EELVAE+GSAFL A+L++EGEV+HESY+ SWL+ LK+DK+ +F+AA+ A +A 
Sbjct  252  GDPLYSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDKKALFRAAGQARQAC  311

Query  309  RYLMD  313
             +L++
Sbjct  312  EFLLN  316

91) Rahaq2_1703 in NC_016818


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  182 bits (675),  Expect = 2e-47, Method: Compositional matrix adjust.
 Identities = 124/304 (41%), Positives = 189/304 (63%), Gaps = 25/304 (8%)

Query  34   SKNSTDIYQAVTYSIITALEAGVKPWSCPWQRVPGM-SGLPSNYATGAAYSGMNIMLLWS  92
             K   DIYQ VT  I++ALE G +PW  PW+   G  +G+P N  TG +Y G+N++LLW 
Sbjct  13   DKPVRDIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTGFPVNALTGHSYQGINVLLLWL  72

Query  93   SASEQGFNDSRWMTYKQAKAEGGQVRKGEHGTTAIFYTT------------LEKENDDGE  140
            SA+EQGF    W+TY+QA+  GG+VRKGE +T ++++              L  E+++  
Sbjct  73   SAAEQGFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHGELLRDEHGEVV  132

Query  141  TDYIPMLKTFTVFNVEQIDGLPMR--DEAVFPAGTFE--PLPPAE---ALFLYSGATIIE  193
               +PM+K+  +FN+ Q D+LP +  ++  +P+       LP+++    ++  SG  +  
Sbjct  133  MTEVPMIKANPLFNIAQCDDLPAHFYENRRLPGEETAGITLPATHRVLDILNASGVKVTS  192

Query  194  KGQN-AFFAPSTDEIHLPERRLFSDAANFYATGLHELIHWCGAKSRLNREMKG----KFG  248
             +QN A+++PS D I +P    F   A++ AT LHEL+H  G  SRL RE       KFG
Sbjct  193  AAQNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLAREGITSSSLKFG  252

Query  249  SESYAFEELIAELGSAFLMADLGVVGEVQHESYIASWLKALKNDKRYIFKAASAASKAHR  308
               Y+FEEL+AE+GSAFL A+L+V GEV+HESY+ SWL+ LK+DK+ +F+AA+ A +A  
Sbjct  253  DPLYSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDKKALFRAAGQARQACE  312

Query  309  YLMD  312
            +L++
Sbjct  313  FLLN  316

92) ardC in NC_004547


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  182 bits (673),  Expect = 3e-47, Method: Compositional matrix adjust.
 Identities = 124/301 (42%), Positives = 185/301 (62%), Gaps = 29/301 (9%)

Query  35   DIYQTVTDSIISALEAGVKPWSCPWQRVPGM-SGLPSNYSTGAAYSGMNIMLLWCSASEQ  93
            DIYQ VTD I++ALE G +PW  PW+   G  +G+P N  TG +Y G+N++LLW SA+EQ
Sbjct  18   DIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTGFPVNALTGHSYQGINVLLLWLSAAEQ  77

Query  94   GFNDSRWMTYKQAKAEGGQVRKGEHGTTAIFYTT------------LEKENDEGETDSIP  141
            GF    W+TY+QA+  GG+VRKGE +T ++++              L  E++E     +P
Sbjct  78   GFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHGELLRDEHGEVVMTEVP  137

Query  142  MLKMFTVFNVEQIDGL---------LLSDEAVYPAEIFESLPRAEALFRNSGATIIEKGQ  192
            M+K   +FN+ Q D+L         L ++E+  ++  + +  R   ++  SG  +   +Q
Sbjct  138  MIKANPLFNIAQCDDLPAHFYENRRLPGEET--AGITLPATHRVLDILNASGVKVTSAAQ  195

Query  193  N-AFYVPSTDEIRLPERRLFTDAANFYATGLHELVHWSGAKSRLNREMKG----RFGSEG  247
            N A+Y PS D I +P    F   A++ AT LHELVH +G  SRL RE       +FG   
Sbjct  196  NRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLAREGITSSSLKFGDPL  255

Query  248  YAFEELIAELGSAFLMADLGIVGEVQHESYIASWLKALKNDKRYIFKAATAASKAHRYLV  307
            Y+FEEL+AE+GSAFL A+L++ GEV+HESY+ SWL+ LK+DK+ +F+AA  A +A  +L+
Sbjct  256  YSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDKKALFRAAGQARQACEFLL  315

Query  308  D  308
            +
Sbjct  316  N  316

93) W5S_1606 in NC_017845


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  181 bits (671),  Expect = 4e-47, Method: Compositional matrix adjust.
 Identities = 124/299 (42%), Positives = 190/299 (64%), Gaps = 25/299 (8%)

Query  39   DIYQTVTDNIIAALEAGVKPWSCPWQRVPGM-SGLPSNFATGIAYSGMNIMLLWCSASKQ  97
            DIYQ VTD I+AALE G +PW  PW+   G  +G+P N  TG +Y G+N++LLW SA+ Q
Sbjct  18   DIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTGFPVNALTGHSYQGINVLLLWLSAAEQ  77

Query  98   GFGDSRWMTYKQAQVVGGQVRKGEHGTTAIFYTT------------LEKENEDGDIDQIP  145
            GFG   W+TY+QAQ +GG+VRKGE +T ++++              L  E+ +  + ++P
Sbjct  78   GFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHGELLRDEHGEVVMTEVP  137

Query  146  MLKTFNVFNVEQIDGLPL----TTETVSPEATFDPLPEAE---NLFQKSGANIIEKGQN-  197
            M+K+  +FN+ Q D+LP          + E++   LP ++   ++++ SG ++   +QN 
Sbjct  138  MIKANPLFNIAQCDDLPAHFYENRRLPGEETAGITLPATHRVLDILNASGVKVTSAAQNR  197

Query  198  AFFRPSTDEVWLPERHLFSDAANFYATGLHELVHWSGGKKRLNREMKG----KFGSADYA  253
            A++ PS D + +P    F   A++ AT LHELVH +G   RL RE       KFG + Y+
Sbjct  198  AYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLAREGITSSSLKFGDPLYS  257

Query  254  EEELVAELGSAFLMADLGIVGEVQHESYIASWLQALKNDKRYVFKAASAASKAHRYLMD  312
             EELVAE+GSAFL A+L++ GEV+HESY+ SWL+ LK+DK+ +F+AA+ A +A  +L++
Sbjct  258  FEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDKKALFRAAGQARQACEFLLN  316

94) KPHS_34890 in NC_016845


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  180 bits (666),  Expect = 1e-46, Method: Compositional matrix adjust.
 Identities = 124/305 (41%), Positives = 190/305 (63%), Gaps = 27/305 (8%)

Query  34   SKTRADIYQTVTNNIIAALEGGVKPWSCPWQRVSGI-SGLPSNYATGVAYSGMNIMLLWC  92
             K   DIYQ VT+ I+AALE G +PW  PW+   G  +G+P N  TG +Y G+N++LLW 
Sbjct  13   DKPVRDIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTGFPVNALTGHSYQGINVLLLWL  72

Query  93   SASKQGFSDSRWMTYKQAQVAGGQVRKGEHGTTAIFYTT------------LEKENDAGE  140
            SA+ QGF+   W+TY+QAQ  GG+VRKGE +T ++++              L  E++   
Sbjct  73   SAAEQGFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHGELLRDEHGEVV  132

Query  141  VEHIPMLKTFTVFNVQQIDGLS--------LTTETVSPEATFDPLPQAENLLRKSGANII  192
            + ++PM+K+  +FN+ Q D+L+        L  E  ++  T+ +  +  ++L  SG ++ 
Sbjct  133  MTEVPMIKANPLFNIAQCDDLPAHFYENRRLPGEE-TAGITLPATHRVLDILNASGVKVT  191

Query  193  EKGQN-AFFSPSTDEVWLPERHLFSDAANFYATGLHELVHWSGGKKRLNREMKG----KF  247
              +QN A++SPS D + +P    F   A++ AT LHELVH +G   RL RE       KF
Sbjct  192  SAAQNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLAREGITSSSLKF  251

Query  248  GSADYAEEELVAELGSAFLMADLGIEGEVQHGSYIASWLKALKNDKRYIFKAASAASKAH  307
            G + Y+ EELVAE+GSAFL A+L++EGEV+H SY+ SWL+ LK+DK+ +F+AA+ A +A 
Sbjct  252  GDPLYSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDKKALFRAAGQARQAC  311

Query  308  RYLMD  312
             +L++
Sbjct  312  EFLLN  316

95) Dd586_2683 in NC_013592


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  180 bits (668),  Expect = 8e-47, Method: Compositional matrix adjust.
 Identities = 123/301 (41%), Positives = 188/301 (63%), Gaps = 27/301 (8%)

Query  39   KDIYQTVTDNIIAALEAGVKPWSCPWQRVSGM-SGLPSNYATGVAYSGMNIMLLWSSASK  97
            +DIYQ VTD I+AALE G +PW  PW+   G  +G+P N  TG +Y G+N++LLW SA+ 
Sbjct  17   RDIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTGFPVNALTGHSYQGINVLLLWLSAAE  76

Query  98   QGFSDSRWLTYKQAQAAGGQVRTRERGTTAIFYTT------------LEKENDAGEVEHI  145
            QGF+   WLTY+QAQ  GG+VR  E +T ++++              L  E++   + ++
Sbjct  77   QGFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHGELLRDEHGEVVMTEV  136

Query  146  PMLKTFTVFNVQQIDGLA--------LTTETVSPEATFDPLPLAENLFRKSGANIIEKGQ  197
            PM+K+  +FN+ Q D+L+        L  E  ++  T+ +     +++  SG ++   +Q
Sbjct  137  PMIKANPLFNIAQCDDLPAHFYENRRLPGEE-TAGITLPATHRVLDILNASGVKVTSAAQ  195

Query  198  N-AFFSPSTDEVCLPERHLFSDAANFYATGLHELVHWSGGKKRLNREMKG----KFGSAD  252
            N A++SPS D + +P    F   A++ AT LHELVH +G   RL RE       KFG + 
Sbjct  196  NRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLAREGITSSSLKFGDPL  255

Query  253  YAEEELVAELGSAFLMADLGIEGEVQHESYIASWLKALKNDKRYIFKAASAASKAHRYLM  312
            Y+ EELVAE+GSAFL A+L++EGEV+HESY+ SWL+ LK+DK+ +F+AA+ A +A  +L+
Sbjct  256  YSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDKKALFRAAGQARQACEFLL  315

Query  313  D  313
            +
Sbjct  316  N  316

96) ardC in NC_012731


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  180 bits (668),  Expect = 9e-47, Method: Compositional matrix adjust.
 Identities = 126/305 (42%), Positives = 192/305 (63%), Gaps = 27/305 (8%)

Query  35   SKTRTDIYQTVTDNIIAALEAGVKPWSCPWQRVDGM-SGLPSNYATGAAYSGMNIMLLWC  93
             K   DIYQ VTD I+AALE G +PW  PW+  +G  +G+P N  TG +Y G+N++LLW 
Sbjct  13   DKPVRDIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTGFPVNALTGHSYQGINVLLLWL  72

Query  94   SASKQGFSDYRWMTYKQAQAAGGQVRKGERGTTAIFYTT------------LEKENDTGD  141
            SA+ QGF+   W+TY+QAQ  GG+VRKGE +T ++++              L  E++   
Sbjct  73   SAAEQGFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHGELLRDEHGEVV  132

Query  142  VEHIPMLKTFTVFNVQQIDGLA--------LTTETVSPQATFDPLPQAENLLRKSGANII  193
            + ++PM+K+  +FN+ Q D+L+        L  E  ++  T+ +  +  ++L  SG ++ 
Sbjct  133  MTEVPMIKANPLFNIAQCDDLPAHFYENRRLPGEE-TAGITLPATHRVLDILNASGVKVT  191

Query  194  EKGQN-AFFSPSTDEVWLPERHLFSDAANFYATGLHELVHWSGGKKRLNREMKG----KF  248
              +QN A++SPS D + +P    F   A++ AT LHELVH +G   RL RE       KF
Sbjct  192  SAAQNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLAREGITSSSLKF  251

Query  249  GSADYAEEELVAELGSAFLMADLGIDGEVQHESYIASWLKALKNDKRYIFKAASAASKAH  308
            G + Y+ EELVAE+GSAFL A+L+++GEV+HESY+ SWL+ LK+DK+ +F+AA+ A +A 
Sbjct  252  GDPLYSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDKKALFRAAGQARQAC  311

Query  309  CYLMN  313
             +L+N
Sbjct  312  EFLLN  316

97) ECUMN_2301 in NC_011751


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  179 bits (665),  Expect = 2e-46, Method: Compositional matrix adjust.
 Identities = 124/305 (41%), Positives = 190/305 (63%), Gaps = 27/305 (8%)

Query  99   SKTRADIYQTVTNNIIAALEGGVKPWSCPWQRVSGI-SGLPSNYATGVAYSGMNIMLLWC  157
             K   DIYQ VT+ I+AALE G +PW  PW+   G  +G+P N  TG +Y G+N++LLW 
Sbjct  13   DKPVRDIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTGFPVNALTGHSYQGINVLLLWL  72

Query  158  SASKQGFSDSRWMTYKQAQVAGGQVRKGEHGTTAIFYTT------------LEKENDAGE  205
            SA+ QGF+   W+TY+QAQ  GG+VRKGE +T ++++              L  E++   
Sbjct  73   SAAEQGFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHGELLRDEHGEVV  132

Query  206  VEHIPMLKTFTVFNVQQIDGLS--------LTTETVSPEATFDPLPQAENLLRKSGANII  257
            + ++PM+K+  +FN+ Q D+L+        L  E  ++  T+ +  +  ++L  SG ++ 
Sbjct  133  MTEVPMIKANPLFNIAQCDDLPAHFYENRRLPGEE-TAGITLPATHRVLDILNASGVKVT  191

Query  258  EKGQN-AFFSPSTDEVWLPERHLFSDAANFYATGLHELVHWSGGKKRLNREMKG----KF  312
              +QN A++SPS D + +P    F   A++ AT LHELVH +G   RL RE       KF
Sbjct  192  SAAQNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLAREGITSSSLKF  251

Query  313  GSADYAEEELVAELGSAFLMADLGIEGEVQHGSYIASWLKALKNDKRYIFKAASAASKAH  372
            G + Y+ EELVAE+GSAFL A+L++EGEV+H SY+ SWL+ LK+DK+ +F+AA+ A +A 
Sbjct  252  GDPLYSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDKKALFRAAGQARQAC  311

Query  373  RYLMD  377
             +L++
Sbjct  312  EFLLN  316

98) SLG_26210 in NC_015976


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  178 bits (659),  Expect = 4e-46, Method: Compositional matrix adjust.
 Identities = 128/317 (41%), Positives = 196/317 (62%), Gaps = 20/317 (6%)

Query  11   KAGKQEREQGSSPRADLYQTVTARIVAELEAGRFPWVQPWGKVGDGSPVPGLPMNALTRR  70
            K++++ R  +  P  D+YQ VT RIVA LE G  PW +PW + ++G+   G+P+NALT +
Sbjct  3    KSDRKRRPAADKPVRDIYQEVTDRIVAALEKGTRPWKRPW-RPSEGTGT-GFPVNALTGH  60

Query  71   AYSGINILILWGAVIERGWPSQGWLTFRQASQAGGAVRKGERGT-TVVYADRFVPeaeae  129
            +Y GIN+L+LW +  E+G   + WLT+RQA Q GG VRKGE +T TV++    VP  + +
Sbjct  61   SYQGINVLLLWLSAAEQGFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRH  120

Query  130  ra----rergdearaIPFLRRFTVFNVAQCEGLRPGLMPDPVRLPAREIVPVAE------  179
                   +       +P ++   +FN+AQC++L P+   +  RLP+ E   ++       
Sbjct  121  GELLRDEHGEVVMTEVPMIKANPLFNIAQCDDL-PAHFYENRRLPGEETAGITLPATHRV  179

Query  180  -EVIAASGVDFRIGG-DRAFYVPAHDFVQVPPQPAFFEQINYYRTCLHELTHATGHARRL  237
             +++ ASGV    ++ +RA+Y P++D + +P  + F  + +Y  T LHEL H+TGH+ RL
Sbjct  180  LDILNASGVKVTSAAQNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRL  239

Query  238  NRN-LTGA---FGSNDYAREELVAEMGSAFLCAALGIVPTVRHADYLASWLEVCQEDSRA  293
             R+ +T++   FG   Y+ EELVAEMGSAFLCA L++   V H  YL SWL V + D +A
Sbjct  240  AREGITSSSLKFGDPLYSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDKKA  299

Query  294  IFRAASQASKAADWLLT  310
            +FRAA+QA +A + LL 
Sbjct  300  LFRAAGQARQACEFLLN  316

99) RGE_16400 in NC_017075


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  170 bits (627),  Expect = 1e-43, Method: Compositional matrix adjust.
 Identities = 117/287 (41%), Positives = 170/287 (60%), Gaps = 20/287 (6%)

Query  8    RDLYAEVTRRIVEALDRGVRPWSCPWSRGAASGGMLP-RRHGGEPYRGVNVLLLWGAAME  66
            RD+Y EVT RIV AL++G RPW  PW  + ++G  +P     G++Y+G+NVLLLW +A E
Sbjct  17   RDIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTGFPVNALTGHSYQGINVLLLWLSAAE  76

Query  67   RGFTSRTWLTYRQAEALGGQVRKGERGT-MVVYAGQFSPSKEGTEAV---EGEAPARRAV  122
            +GF    WLTYRQA+ LGG+VRKGE +T  V++     P+K+    +   E        V
Sbjct  77   QGFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHGELLRDEHGEVVMTEV  136

Query  123  AFLRSYTVFNTEQVDGLaap---------aapevpaaIQPdadalalvaragatvrHGGD  173
            + +++  +FN  Q D+L+A                +    +     L A +      + +
Sbjct  137  PMIKANPLFNIAQCDDLPAHFYENRRLPGEETAGITLPATHRVLDILNASGVKVTSAAQN  196

Query  174  RAFYAPGPDLVQMPDASRFRDAAAYFGTLAHELVHWTGHPDRLARQ----FGQRFGDQAY  229
            RA+Y+P+ D + MP +S+F   A Y +TL HELVH TGHP RLAR+     + +FGD  Y
Sbjct  197  RAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLAREGITSSSLKFGDPLY  256

Query  230  AMEELVAELGAAFVCAGSRLSPEPREDHAAYLAAWLAVLKHDKRAIF  276
            + EELVAE+G+AF+CA  +LS E   +H +YL +WL VLK DK+A+F
Sbjct  257  SFEELVAEMGSAFLCA--QLSVEGEVNHESYLDSWLRVLKSDKKALF  301

100) SL003B_0602 in NC_015259


> NC_010554_P1|8|G6|197286401|YP_002152273.1|Proteus_mirabilis_HI4320|-|5029..6003|-|PMI2554|DNA 
primase
Length=324

 Score =  112 bits (407),  Expect = 3e-26, Method: Compositional matrix adjust.
 Identities = 114/284 (41%), Positives = 168/284 (60%), Gaps = 30/284 (10%)

Query  7    DVYTQVTNNiiaaieagagDWQMPWHRS-GEGLNRPVNIDTSKAYRGINVVSLWASAQAR  65
            D+Y +VT+ I+AA+E G+  W+ PW+ S G G   PVN  T+ +Y+GINV+ LW SA  +
Sbjct  18   DIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTGFPVNALTGHSYQGINVLLLWLSAAEQ  77

Query  66   GFITGTWGTYRQWQANGCQVRKGEKSSLVVFYKEFEVEERNDTGE---TEHGKRLMA---  119
            GF  + W TYRQ Q  G +VRKGE ++  V++K   V  ++  GE    EHG  +M+   
Sbjct  78   GFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHGELLRDEHGEVVMTEVP  137

Query  120  --RASWVFNADQVDG-----YEAPALPEPKDPVATVAAAER---FITATGAIIRHGG-TR  168
              +A+ +FN  Q D+     YE   LP    +  T++A++R   ++ A+G  +  ++  R
Sbjct  138  MIKANPLFNIAQCDDLPAHFYENRRLPGEETAGITLPATHRVLDILNASGVKVTSAAQNR  197

Query  169  AFYRPSDDIIQMPERERFLGTETSTATESYYATLLHELTHWTGDTRRCDRQ----FGKRF  224
            A+Y PS+D I MP   +F           Y ATLLHEL H TG+  R  R+     + +F
Sbjct  198  AYYSPSQDRIVMPLSSQF------DRNADYQATLLHELVHSTGHPSRLAREGITSSSLKF  251

Query  225  GDDayaveelvaelgaaflCADLGVTLTPRPDHAAYIDSWLKVL  268
            GD  Y+ EELVAE+G+AFLCA+L+V      +H +Y+DSWL+VL
Sbjct  252  GDPLYSFEELVAEMGSAFLCAQLSV--EGEVNHESYLDSWLRVL  293