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PAthogenisity Island DataBase (PAI DB)

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Homologs of pic gene of NC_004741_P1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) pic
( NP_838464.1 )

serine protease precurser

NC_004741
(Shigella flexneri 2457T)

0.0

100

2) O3M_23055
( YP_006772219.1 )

Serine protease pic precursor (ShMu)

NC_018650
(Escherichia coli 2009EL-2050)

0.0

100

3) O3O_21125
( YP_006782694.1 )

Serine protease pic precursor (ShMu)

NC_018661
(Escherichia coli 2009EL-2071)

0.0

100

4) O3O_02220
( YP_006786407.1 )

Serine protease pic precursor (ShMu)

NC_018661
(Escherichia coli 2009EL-2071)

0.0

100

5) O3K_04520
( YP_006777626.1 )

Serine protease pic precursor (ShMu)

NC_018658
(Escherichia coli 2011C-3493)

0.0

100

6) O3K_23140
( YP_006781278.1 )

Serine protease pic precursor (ShMu)

NC_018658
(Escherichia coli 2011C-3493)

0.0

100

7) SFxv_3258
( YP_005728594.1 )

Serine protease pic precursor

NC_017328
(Shigella flexneri 2002017)

0.0

100

8) pic
( NP_708747.3 )

serine protease

NC_004337
(Shigella flexneri 301)

0.0

100

9) pic
( YP_006098864.1 )

serine protease (autotransporter)

NC_017626
(Escherichia coli 042)

0.0

10) EC55989_3279
( YP_002404249.1 )

Serine protease pic precursor (ShMu)

NC_011748
(Escherichia coli 55989)

0.0

11) EC55989_4660
( YP_002405532.1 )

Serine protease pic precursor (ShMu)

NC_011748
(Escherichia coli 55989)

0.0

12) ECABU_c03110
( YP_006104447.1 )

IgA-specific serine endopeptidase precursor

NC_017631
(Escherichia coli ABU 83972)

0.0

13) c0350
( NP_752289.1 )

Pic serine protease

NC_004431
(Escherichia coli CFT073)

0.0

14) i14_0334
( YP_006152473.1 )

Pic serine protease

NC_017652
(Escherichia coli clone D i14)

0.0

15) i02_0334
( YP_006147554.1 )

Pic serine protease

NC_017651
(Escherichia coli clone D i2)

0.0

16) O3M_04570
( YP_006768588.1 )

Serine protease pic precursor (ShMu)

NC_018650
(Escherichia coli 2009EL-2050)

0.0

100

17) ROD_p1411
( YP_003368482.1 )

putative serine protease autotransporter

NC_013717
(Citrobacter rodentium ICC168)

0.0

18) sepA
( YP_005711955.1 )

SepA, extracellular serine protease of the IgA1 protease family

NC_017319
(Shigella flexneri 2002017)

0.0

19) sepA
( NP_858203.1 )

extracellular serine protease SepA

NC_004851
(Shigella flexneri 301)

0.0

20) O3M_26437
( YP_006772835.1 )

protease IgA1

NC_018654
(Escherichia coli 2009EL-2050)

0.0

21) O3K_26432
( YP_006792611.1 )

protease IgA1

NC_018666
(Escherichia coli 2011C-3493)

0.0

22) eatA
( YP_006203824.1 )

serine protease EatA

NC_017724
(Escherichia coli ETEC H10407)

0.0

23) SBG_1083
( YP_004729964.1 )

hemoglobin protease

NC_015761
(Salmonella bongori NCTC 12419)

0.0

24) eatA
( YP_001451588.1 )

secreted serine peptidase EatA

NC_009790
(Escherichia coli E24377A)

0.0

25) A464_1183
( YP_008321779.1 )

IgA1 protease

NC_021870
(Salmonella bongori N268-08)

0.0

26) ECO103_3805
( YP_003223650.1 )

secreted autotransporter serine protease

NC_013353
(Escherichia coli 12009)

0.0

27) ECSF_4014
( YP_003352004.1 )

serine protease

NC_013654
(Escherichia coli SE15)

0.0

28) SARI_01743
( YP_001570771.1 )

hypothetical protein

NC_010067
(Salmonella enterica RSK2980)

0.0

29) ROD_p1251
( YP_003368469.1 )

putative serine protease autotransporter

NC_013717
(Citrobacter rodentium ICC168)

0.0

30) UM146_15930
( YP_006112057.1 )

Vacuolating autotransporter toxin

NC_017632
(Escherichia coli UM146)

0.0

31) ECABU_c03670
( YP_006104502.1 )

IgA-specific serine endopeptidase precursor

NC_017631
(Escherichia coli ABU 83972)

0.0

32) vat
( YP_851472.1 )

vacuolating autotransporter

NC_008563
(Escherichia coli APEC O1)

0.0

33) c0393
( NP_752330.1 )

hemoglobin protease

NC_004431
(Escherichia coli CFT073)

0.0

34) LF82_043
( YP_002555228.1 )

Haemoglobin protease

NC_011993
(Escherichia coli LF82)

0.0

35) NRG857_01335
( YP_006118631.1 )

Vacuolating autotransporter toxin

NC_017634
(Escherichia coli NRG 857C)

0.0

36) vat
( YP_002390114.1 )

Vacuolating autotransporter toxin

NC_011742
(Escherichia coli S88)

0.0

37) hbp
( YP_006099515.1 )

hemoglobin-binding protease Hbp

NC_017628
(Escherichia coli IHE3034)

0.0

38) ECP_0345
( YP_668278.1 )

protein SepA

NC_008253
(Escherichia coli 536)

0.0

39) tsh
( YP_001481228.1 )

Tsh

NC_009837
(Escherichia coli APEC O1)

0.0

40) ECH74115_B0104
( YP_002268480.1 )

immunoglobulin A1 protease domain protein

NC_011350
(Escherichia coli EC4115)

0.0

41) espP
( YP_325580.1 )

putative exoprotein-precursor

NC_007414
(Escherichia coli EDL933)

0.0

42) espP
( NP_052685.1 )

EspP

NC_002128
(Escherichia coli Sakai)

0.0

43) espP
( YP_003082230.1 )

putative exoprotein-precursor

NC_013010
(Escherichia coli TW14359)

0.0

44) espP
( YP_006315987.1 )

EspP

NC_017907
(Escherichia coli Xuzhou21)

0.0

45) pet
( YP_006099165.1 )

serine protease (plasmid-encoded toxin Pet)

NC_017627
(Escherichia coli 042)

2e-177

46) O3M_22910
( YP_006772193.1 )

Serine protease pet precursor (Plasmid-encoded toxin pet)

NC_018650
(Escherichia coli 2009EL-2050)

1e-172

47) O3O_02375
( YP_006786382.1 )

Serine protease pet precursor (Plasmid-encoded toxin pet)

NC_018661
(Escherichia coli 2009EL-2071)

1e-172

48) O3K_23005
( YP_006781255.1 )

Serine protease pet precursor (Plasmid-encoded toxin pet)

NC_018658
(Escherichia coli 2011C-3493)

1e-172

49) EC55989_4682
( YP_002405547.1 )

Serine protease pet precursor (Plasmid-encoded toxin pet)

NC_011748
(Escherichia coli 55989)

1e-172

50) SFxv_3250
( YP_005728588.1 )

Serine protease

NC_017328
(Shigella flexneri 2002017)

1e-172

51) sigA
( NP_838462.1 )

serine protease

NC_004741
(Shigella flexneri 2457T)

1e-172

52) sigA
( NP_708742.1 )

serine protease

NC_004337
(Shigella flexneri 301)

1e-172

53) sigA
( YP_406777.1 )

serine protease

NC_007613
(Shigella boydii Sb227)

1e-172

54) sigA
( YP_410405.1 )

serine protease

NC_007613
(Shigella boydii Sb227)

1e-172

55) SbBS512_E4650
( YP_001882815.1 )

serine protease EatA

NC_010658
(Shigella boydii CDC 3083-94)

2e-172

56) SSON53_18280
( YP_005458160.1 )

serine protease

NC_016822
(Shigella sonnei 53G)

2e-172

57) sigA
( YP_312039.1 )

serine protease

NC_007384
(Shigella sonnei Ss046)

2e-172

• Sequence Alignments

1) pic in NC_004741


> NC_004741_P1|8|G6|30064293|NP_838464.1|Shigella_flexneri_2a_str._2457T|-|15275..18487|pic|S3178|serine 
protease precurser
Length=1070

 Score = 1619 bits (6149),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1070/1070 (100%), Positives = 1070/1070 (100%), Gaps = 0/1070 (0%)

Query  1     MQDDFDAPVDFVSGLGPLNWTYDKTSGTGTLSQGSKNWTMHGQKDNDLNAGKNLVFSGQN  60
             MQDDFDAPVDFVSGLGPLNWTYDKTSGTGTLSQGSKNWTMHGQKDNDLNAGKNLVFSGQN
Sbjct  1     MQDDFDAPVDFVSGLGPLNWTYDKTSGTGTLSQGSKNWTMHGQKDNDLNAGKNLVFSGQN  60

Query  61    GAIILKDSVTQGAGYLEFKDSYTVSAESGKTWTGAGIITDKGTNVTWKVNGVAGDNLHKL  120
             GAIILKDSVTQGAGYLEFKDSYTVSAESGKTWTGAGIITDKGTNVTWKVNGVAGDNLHKL
Sbjct  61    GAIILKDSVTQGAGYLEFKDSYTVSAESGKTWTGAGIITDKGTNVTWKVNGVAGDNLHKL  120

Query  121   GEGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGNIQAFSSVNLASGRPTVVLGDARQVN  180
             GEGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGNIQAFSSVNLASGRPTVVLGDARQVN
Sbjct  121   GEGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGNIQAFSSVNLASGRPTVVLGDARQVN  180

Query  181   PDNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKSQLLLDLKAQDTNVSEPTI  240
             PDNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKSQLLLDLKAQDTNVSEPTI
Sbjct  181   PDNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKSQLLLDLKAQDTNVSEPTI  240

Query  241   GNISPFGGTGTPGNLYSMILNSQTRFYILKSASYGNTLWGNSLNDPAQWEFVGMNKNKAV  300
             GNISPFGGTGTPGNLYSMILNSQTRFYILKSASYGNTLWGNSLNDPAQWEFVGMNKNKAV
Sbjct  241   GNISPFGGTGTPGNLYSMILNSQTRFYILKSASYGNTLWGNSLNDPAQWEFVGMNKNKAV  300

Query  301   QTVKDRILAGRAKQPVIFHGQLTGNMDVAIPQVPGGRKVIFDGSVNLPEGTLSQDSGTLI  360
             QTVKDRILAGRAKQPVIFHGQLTGNMDVAIPQVPGGRKVIFDGSVNLPEGTLSQDSGTLI
Sbjct  301   QTVKDRILAGRAKQPVIFHGQLTGNMDVAIPQVPGGRKVIFDGSVNLPEGTLSQDSGTLI  360

Query  361   FQGHPVIHASISGSAPVSLNQKDWENRQFTMKTLSLKDADFHLSRNASLNSDIKSDNSHI  420
             FQGHPVIHASISGSAPVSLNQKDWENRQFTMKTLSLKDADFHLSRNASLNSDIKSDNSHI
Sbjct  361   FQGHPVIHASISGSAPVSLNQKDWENRQFTMKTLSLKDADFHLSRNASLNSDIKSDNSHI  420

Query  421   TLGSDRAFVDKNDGTGNYVIPEEGTSVPDTVNDRSQYEGNITLNHNSALDIGSRFTGGID  480
             TLGSDRAFVDKNDGTGNYVIPEEGTSVPDTVNDRSQYEGNITLNHNSALDIGSRFTGGID
Sbjct  421   TLGSDRAFVDKNDGTGNYVIPEEGTSVPDTVNDRSQYEGNITLNHNSALDIGSRFTGGID  480

Query  481   AYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLTALNGLFSDGHIQAGKNGKITLSGTP  540
             AYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLTALNGLFSDGHIQAGKNGKITLSGTP
Sbjct  481   AYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLTALNGLFSDGHIQAGKNGKITLSGTP  540

Query  541   VKDTANQYAPAVYLTDGYDLTGDNAALEITRGAHASGDIHASAASTVTIGSDTPaelasa  600
             VKDTANQYAPAVYLTDGYDLTGDNAALEITRGAHASGDIHASAASTVTIGSDTPAELASA
Sbjct  541   VKDTANQYAPAVYLTDGYDLTGDNAALEITRGAHASGDIHASAASTVTIGSDTPAELASA  600

Query  601   etaasafaGSLLEGYNAAFNGAITGGRADVSMHNALWTLGGDSAIHSLTVRNSRISSEGD  660
             ETAASAFAGSLLEGYNAAFNGAITGGRADVSMHNALWTLGGDSAIHSLTVRNSRISSEGD
Sbjct  601   ETAASAFAGSLLEGYNAAFNGAITGGRADVSMHNALWTLGGDSAIHSLTVRNSRISSEGD  660

Query  661   RTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGSDNSLNVSFMNNPAQGQALNIP  720
             RTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGSDNSLNVSFMNNPAQGQALNIP
Sbjct  661   RTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGSDNSLNVSFMNNPAQGQALNIP  720

Query  721   LVTAPAGTSAEMFKAGTRVTGFSRVTPTLHVDTSGGNTKWILDGFkaeadkaaaakadSF  780
             LVTAPAGTSAEMFKAGTRVTGFSRVTPTLHVDTSGGNTKWILDGFKAEADKAAAAKADSF
Sbjct  721   LVTAPAGTSAEMFKAGTRVTGFSRVTPTLHVDTSGGNTKWILDGFKAEADKAAAAKADSF  780

Query  781   MNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMsgagsadggysdNYTHVQVGFDKK  840
             MNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMSGAGSADGGYSDNYTHVQVGFDKK
Sbjct  781   MNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMSGAGSADGGYSDNYTHVQVGFDKK  840

Query  841   HELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYASALFESGAYIDLIGKYIHHDN  900
             HELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYASALFESGAYIDLIGKYIHHDN
Sbjct  841   HELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYASALFESGAYIDLIGKYIHHDN  900

Query  901   DYTGNFASLGTKHYNTHSWYAGAETGYRYHLTEDTFIEPQAELVYGAVSGKTFRWKDGDM  960
             DYTGNFASLGTKHYNTHSWYAGAETGYRYHLTEDTFIEPQAELVYGAVSGKTFRWKDGDM
Sbjct  901   DYTGNFASLGTKHYNTHSWYAGAETGYRYHLTEDTFIEPQAELVYGAVSGKTFRWKDGDM  960

Query  961   DLSMKNRDFSPLVGRTGVELGKTFSGKDWSVTARAGTSWQFDLLNNGETVLRDASGEKRI  1020
             DLSMKNRDFSPLVGRTGVELGKTFSGKDWSVTARAGTSWQFDLLNNGETVLRDASGEKRI
Sbjct  961   DLSMKNRDFSPLVGRTGVELGKTFSGKDWSVTARAGTSWQFDLLNNGETVLRDASGEKRI  1020

Query  1021  KGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNVDNAVNANFRYMF  1070
             KGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNVDNAVNANFRYMF
Sbjct  1021  KGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNVDNAVNANFRYMF  1070

2) O3M_23055 in NC_018650


> NC_004741_P1|8|G6|30064293|NP_838464.1|Shigella_flexneri_2a_str._2457T|-|15275..18487|pic|S3178|serine 
protease precurser
Length=1070

 Score = 1611 bits (6117),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1070/1070 (100%), Positives = 1070/1070 (100%), Gaps = 0/1070 (0%)

Query  303   MQDDFDAPVDFVSGLGPLNWTYDKTSGTGTLSQGSKNWTMHGQKDNDLNAGKNLVFSGQN  362
             MQDDFDAPVDFVSGLGPLNWTYDKTSGTGTLSQGSKNWTMHGQKDNDLNAGKNLVFSGQN
Sbjct  1     MQDDFDAPVDFVSGLGPLNWTYDKTSGTGTLSQGSKNWTMHGQKDNDLNAGKNLVFSGQN  60

Query  363   GAIILKDSVTQGAGYLEFKDSYTVSAESGKTWTGAGIITDKGTNVTWKVNGVAGDNLHKL  422
             GAIILKDSVTQGAGYLEFKDSYTVSAESGKTWTGAGIITDKGTNVTWKVNGVAGDNLHKL
Sbjct  61    GAIILKDSVTQGAGYLEFKDSYTVSAESGKTWTGAGIITDKGTNVTWKVNGVAGDNLHKL  120

Query  423   GEGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGNIQAFSSVNLASGRPTVVLGDARQVN  482
             GEGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGNIQAFSSVNLASGRPTVVLGDARQVN
Sbjct  121   GEGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGNIQAFSSVNLASGRPTVVLGDARQVN  180

Query  483   PDNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKSQLLLDLKAQDTNVSEPTI  542
             PDNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKSQLLLDLKAQDTNVSEPTI
Sbjct  181   PDNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKSQLLLDLKAQDTNVSEPTI  240

Query  543   GNISPFGGTGTPGNLYSMILNSQTRFYILKSASYGNTLWGNSLNDPAQWEFVGMNKNKAV  602
             GNISPFGGTGTPGNLYSMILNSQTRFYILKSASYGNTLWGNSLNDPAQWEFVGMNKNKAV
Sbjct  241   GNISPFGGTGTPGNLYSMILNSQTRFYILKSASYGNTLWGNSLNDPAQWEFVGMNKNKAV  300

Query  603   QTVKDRILAGRAKQPVIFHGQLTGNMDVAIPQVPGGRKVIFDGSVNLPEGTLSQDSGTLI  662
             QTVKDRILAGRAKQPVIFHGQLTGNMDVAIPQVPGGRKVIFDGSVNLPEGTLSQDSGTLI
Sbjct  301   QTVKDRILAGRAKQPVIFHGQLTGNMDVAIPQVPGGRKVIFDGSVNLPEGTLSQDSGTLI  360

Query  663   FQGHPVIHASISGSAPVSLNQKDWENRQFTMKTLSLKDADFHLSRNASLNSDIKSDNSHI  722
             FQGHPVIHASISGSAPVSLNQKDWENRQFTMKTLSLKDADFHLSRNASLNSDIKSDNSHI
Sbjct  361   FQGHPVIHASISGSAPVSLNQKDWENRQFTMKTLSLKDADFHLSRNASLNSDIKSDNSHI  420

Query  723   TLGSDRAFVDKNDGTGNYVIPEEGTSVPDTVNDRSQYEGNITLNHNSALDIGSRFTGGID  782
             TLGSDRAFVDKNDGTGNYVIPEEGTSVPDTVNDRSQYEGNITLNHNSALDIGSRFTGGID
Sbjct  421   TLGSDRAFVDKNDGTGNYVIPEEGTSVPDTVNDRSQYEGNITLNHNSALDIGSRFTGGID  480

Query  783   AYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLTALNGLFSDGHIQAGKNGKITLSGTP  842
             AYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLTALNGLFSDGHIQAGKNGKITLSGTP
Sbjct  481   AYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLTALNGLFSDGHIQAGKNGKITLSGTP  540

Query  843   VKDTANQYAPAVYLTDGYDLTGDNAALEITRGAHASGDIHASAASTVTIGSDTPaelasa  902
             VKDTANQYAPAVYLTDGYDLTGDNAALEITRGAHASGDIHASAASTVTIGSDTPAELASA
Sbjct  541   VKDTANQYAPAVYLTDGYDLTGDNAALEITRGAHASGDIHASAASTVTIGSDTPAELASA  600

Query  903   etaasafaGSLLEGYNAAFNGAITGGRADVSMHNALWTLGGDSAIHSLTVRNSRISSEGD  962
             ETAASAFAGSLLEGYNAAFNGAITGGRADVSMHNALWTLGGDSAIHSLTVRNSRISSEGD
Sbjct  601   ETAASAFAGSLLEGYNAAFNGAITGGRADVSMHNALWTLGGDSAIHSLTVRNSRISSEGD  660

Query  963   RTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGSDNSLNVSFMNNPAQGQALNIP  1022
             RTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGSDNSLNVSFMNNPAQGQALNIP
Sbjct  661   RTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGSDNSLNVSFMNNPAQGQALNIP  720

Query  1023  LVTAPAGTSAEMFKAGTRVTGFSRVTPTLHVDTSGGNTKWILDGFkaeadkaaaakadSF  1082
             LVTAPAGTSAEMFKAGTRVTGFSRVTPTLHVDTSGGNTKWILDGFKAEADKAAAAKADSF
Sbjct  721   LVTAPAGTSAEMFKAGTRVTGFSRVTPTLHVDTSGGNTKWILDGFKAEADKAAAAKADSF  780

Query  1083  MNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMsgagsadggysdNYTHVQVGFDKK  1142
             MNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMSGAGSADGGYSDNYTHVQVGFDKK
Sbjct  781   MNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMSGAGSADGGYSDNYTHVQVGFDKK  840

Query  1143  HELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYASALFESGAYIDLIGKYIHHDN  1202
             HELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYASALFESGAYIDLIGKYIHHDN
Sbjct  841   HELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYASALFESGAYIDLIGKYIHHDN  900

Query  1203  DYTGNFASLGTKHYNTHSWYAGAETGYRYHLTEDTFIEPQAELVYGAVSGKTFRWKDGDM  1262
             DYTGNFASLGTKHYNTHSWYAGAETGYRYHLTEDTFIEPQAELVYGAVSGKTFRWKDGDM
Sbjct  901   DYTGNFASLGTKHYNTHSWYAGAETGYRYHLTEDTFIEPQAELVYGAVSGKTFRWKDGDM  960

Query  1263  DLSMKNRDFSPLVGRTGVELGKTFSGKDWSVTARAGTSWQFDLLNNGETVLRDASGEKRI  1322
             DLSMKNRDFSPLVGRTGVELGKTFSGKDWSVTARAGTSWQFDLLNNGETVLRDASGEKRI
Sbjct  961   DLSMKNRDFSPLVGRTGVELGKTFSGKDWSVTARAGTSWQFDLLNNGETVLRDASGEKRI  1020

Query  1323  KGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNVDNAVNANFRYMF  1372
             KGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNVDNAVNANFRYMF
Sbjct  1021  KGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNVDNAVNANFRYMF  1070

3) O3O_21125 in NC_018661


> NC_004741_P1|8|G6|30064293|NP_838464.1|Shigella_flexneri_2a_str._2457T|-|15275..18487|pic|S3178|serine 
protease precurser
Length=1070

 Score = 1611 bits (6117),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1070/1070 (100%), Positives = 1070/1070 (100%), Gaps = 0/1070 (0%)

Query  303   MQDDFDAPVDFVSGLGPLNWTYDKTSGTGTLSQGSKNWTMHGQKDNDLNAGKNLVFSGQN  362
             MQDDFDAPVDFVSGLGPLNWTYDKTSGTGTLSQGSKNWTMHGQKDNDLNAGKNLVFSGQN
Sbjct  1     MQDDFDAPVDFVSGLGPLNWTYDKTSGTGTLSQGSKNWTMHGQKDNDLNAGKNLVFSGQN  60

Query  363   GAIILKDSVTQGAGYLEFKDSYTVSAESGKTWTGAGIITDKGTNVTWKVNGVAGDNLHKL  422
             GAIILKDSVTQGAGYLEFKDSYTVSAESGKTWTGAGIITDKGTNVTWKVNGVAGDNLHKL
Sbjct  61    GAIILKDSVTQGAGYLEFKDSYTVSAESGKTWTGAGIITDKGTNVTWKVNGVAGDNLHKL  120

Query  423   GEGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGNIQAFSSVNLASGRPTVVLGDARQVN  482
             GEGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGNIQAFSSVNLASGRPTVVLGDARQVN
Sbjct  121   GEGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGNIQAFSSVNLASGRPTVVLGDARQVN  180

Query  483   PDNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKSQLLLDLKAQDTNVSEPTI  542
             PDNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKSQLLLDLKAQDTNVSEPTI
Sbjct  181   PDNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKSQLLLDLKAQDTNVSEPTI  240

Query  543   GNISPFGGTGTPGNLYSMILNSQTRFYILKSASYGNTLWGNSLNDPAQWEFVGMNKNKAV  602
             GNISPFGGTGTPGNLYSMILNSQTRFYILKSASYGNTLWGNSLNDPAQWEFVGMNKNKAV
Sbjct  241   GNISPFGGTGTPGNLYSMILNSQTRFYILKSASYGNTLWGNSLNDPAQWEFVGMNKNKAV  300

Query  603   QTVKDRILAGRAKQPVIFHGQLTGNMDVAIPQVPGGRKVIFDGSVNLPEGTLSQDSGTLI  662
             QTVKDRILAGRAKQPVIFHGQLTGNMDVAIPQVPGGRKVIFDGSVNLPEGTLSQDSGTLI
Sbjct  301   QTVKDRILAGRAKQPVIFHGQLTGNMDVAIPQVPGGRKVIFDGSVNLPEGTLSQDSGTLI  360

Query  663   FQGHPVIHASISGSAPVSLNQKDWENRQFTMKTLSLKDADFHLSRNASLNSDIKSDNSHI  722
             FQGHPVIHASISGSAPVSLNQKDWENRQFTMKTLSLKDADFHLSRNASLNSDIKSDNSHI
Sbjct  361   FQGHPVIHASISGSAPVSLNQKDWENRQFTMKTLSLKDADFHLSRNASLNSDIKSDNSHI  420

Query  723   TLGSDRAFVDKNDGTGNYVIPEEGTSVPDTVNDRSQYEGNITLNHNSALDIGSRFTGGID  782
             TLGSDRAFVDKNDGTGNYVIPEEGTSVPDTVNDRSQYEGNITLNHNSALDIGSRFTGGID
Sbjct  421   TLGSDRAFVDKNDGTGNYVIPEEGTSVPDTVNDRSQYEGNITLNHNSALDIGSRFTGGID  480

Query  783   AYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLTALNGLFSDGHIQAGKNGKITLSGTP  842
             AYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLTALNGLFSDGHIQAGKNGKITLSGTP
Sbjct  481   AYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLTALNGLFSDGHIQAGKNGKITLSGTP  540

Query  843   VKDTANQYAPAVYLTDGYDLTGDNAALEITRGAHASGDIHASAASTVTIGSDTPaelasa  902
             VKDTANQYAPAVYLTDGYDLTGDNAALEITRGAHASGDIHASAASTVTIGSDTPAELASA
Sbjct  541   VKDTANQYAPAVYLTDGYDLTGDNAALEITRGAHASGDIHASAASTVTIGSDTPAELASA  600

Query  903   etaasafaGSLLEGYNAAFNGAITGGRADVSMHNALWTLGGDSAIHSLTVRNSRISSEGD  962
             ETAASAFAGSLLEGYNAAFNGAITGGRADVSMHNALWTLGGDSAIHSLTVRNSRISSEGD
Sbjct  601   ETAASAFAGSLLEGYNAAFNGAITGGRADVSMHNALWTLGGDSAIHSLTVRNSRISSEGD  660

Query  963   RTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGSDNSLNVSFMNNPAQGQALNIP  1022
             RTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGSDNSLNVSFMNNPAQGQALNIP
Sbjct  661   RTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGSDNSLNVSFMNNPAQGQALNIP  720

Query  1023  LVTAPAGTSAEMFKAGTRVTGFSRVTPTLHVDTSGGNTKWILDGFkaeadkaaaakadSF  1082
             LVTAPAGTSAEMFKAGTRVTGFSRVTPTLHVDTSGGNTKWILDGFKAEADKAAAAKADSF
Sbjct  721   LVTAPAGTSAEMFKAGTRVTGFSRVTPTLHVDTSGGNTKWILDGFKAEADKAAAAKADSF  780

Query  1083  MNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMsgagsadggysdNYTHVQVGFDKK  1142
             MNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMSGAGSADGGYSDNYTHVQVGFDKK
Sbjct  781   MNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMSGAGSADGGYSDNYTHVQVGFDKK  840

Query  1143  HELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYASALFESGAYIDLIGKYIHHDN  1202
             HELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYASALFESGAYIDLIGKYIHHDN
Sbjct  841   HELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYASALFESGAYIDLIGKYIHHDN  900

Query  1203  DYTGNFASLGTKHYNTHSWYAGAETGYRYHLTEDTFIEPQAELVYGAVSGKTFRWKDGDM  1262
             DYTGNFASLGTKHYNTHSWYAGAETGYRYHLTEDTFIEPQAELVYGAVSGKTFRWKDGDM
Sbjct  901   DYTGNFASLGTKHYNTHSWYAGAETGYRYHLTEDTFIEPQAELVYGAVSGKTFRWKDGDM  960

Query  1263  DLSMKNRDFSPLVGRTGVELGKTFSGKDWSVTARAGTSWQFDLLNNGETVLRDASGEKRI  1322
             DLSMKNRDFSPLVGRTGVELGKTFSGKDWSVTARAGTSWQFDLLNNGETVLRDASGEKRI
Sbjct  961   DLSMKNRDFSPLVGRTGVELGKTFSGKDWSVTARAGTSWQFDLLNNGETVLRDASGEKRI  1020

Query  1323  KGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNVDNAVNANFRYMF  1372
             KGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNVDNAVNANFRYMF
Sbjct  1021  KGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNVDNAVNANFRYMF  1070

4) O3O_02220 in NC_018661


> NC_004741_P1|8|G6|30064293|NP_838464.1|Shigella_flexneri_2a_str._2457T|-|15275..18487|pic|S3178|serine 
protease precurser
Length=1070

 Score = 1611 bits (6117),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1070/1070 (100%), Positives = 1070/1070 (100%), Gaps = 0/1070 (0%)

Query  303   MQDDFDAPVDFVSGLGPLNWTYDKTSGTGTLSQGSKNWTMHGQKDNDLNAGKNLVFSGQN  362
             MQDDFDAPVDFVSGLGPLNWTYDKTSGTGTLSQGSKNWTMHGQKDNDLNAGKNLVFSGQN
Sbjct  1     MQDDFDAPVDFVSGLGPLNWTYDKTSGTGTLSQGSKNWTMHGQKDNDLNAGKNLVFSGQN  60

Query  363   GAIILKDSVTQGAGYLEFKDSYTVSAESGKTWTGAGIITDKGTNVTWKVNGVAGDNLHKL  422
             GAIILKDSVTQGAGYLEFKDSYTVSAESGKTWTGAGIITDKGTNVTWKVNGVAGDNLHKL
Sbjct  61    GAIILKDSVTQGAGYLEFKDSYTVSAESGKTWTGAGIITDKGTNVTWKVNGVAGDNLHKL  120

Query  423   GEGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGNIQAFSSVNLASGRPTVVLGDARQVN  482
             GEGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGNIQAFSSVNLASGRPTVVLGDARQVN
Sbjct  121   GEGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGNIQAFSSVNLASGRPTVVLGDARQVN  180

Query  483   PDNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKSQLLLDLKAQDTNVSEPTI  542
             PDNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKSQLLLDLKAQDTNVSEPTI
Sbjct  181   PDNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKSQLLLDLKAQDTNVSEPTI  240

Query  543   GNISPFGGTGTPGNLYSMILNSQTRFYILKSASYGNTLWGNSLNDPAQWEFVGMNKNKAV  602
             GNISPFGGTGTPGNLYSMILNSQTRFYILKSASYGNTLWGNSLNDPAQWEFVGMNKNKAV
Sbjct  241   GNISPFGGTGTPGNLYSMILNSQTRFYILKSASYGNTLWGNSLNDPAQWEFVGMNKNKAV  300

Query  603   QTVKDRILAGRAKQPVIFHGQLTGNMDVAIPQVPGGRKVIFDGSVNLPEGTLSQDSGTLI  662
             QTVKDRILAGRAKQPVIFHGQLTGNMDVAIPQVPGGRKVIFDGSVNLPEGTLSQDSGTLI
Sbjct  301   QTVKDRILAGRAKQPVIFHGQLTGNMDVAIPQVPGGRKVIFDGSVNLPEGTLSQDSGTLI  360

Query  663   FQGHPVIHASISGSAPVSLNQKDWENRQFTMKTLSLKDADFHLSRNASLNSDIKSDNSHI  722
             FQGHPVIHASISGSAPVSLNQKDWENRQFTMKTLSLKDADFHLSRNASLNSDIKSDNSHI
Sbjct  361   FQGHPVIHASISGSAPVSLNQKDWENRQFTMKTLSLKDADFHLSRNASLNSDIKSDNSHI  420

Query  723   TLGSDRAFVDKNDGTGNYVIPEEGTSVPDTVNDRSQYEGNITLNHNSALDIGSRFTGGID  782
             TLGSDRAFVDKNDGTGNYVIPEEGTSVPDTVNDRSQYEGNITLNHNSALDIGSRFTGGID
Sbjct  421   TLGSDRAFVDKNDGTGNYVIPEEGTSVPDTVNDRSQYEGNITLNHNSALDIGSRFTGGID  480

Query  783   AYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLTALNGLFSDGHIQAGKNGKITLSGTP  842
             AYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLTALNGLFSDGHIQAGKNGKITLSGTP
Sbjct  481   AYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLTALNGLFSDGHIQAGKNGKITLSGTP  540

Query  843   VKDTANQYAPAVYLTDGYDLTGDNAALEITRGAHASGDIHASAASTVTIGSDTPaelasa  902
             VKDTANQYAPAVYLTDGYDLTGDNAALEITRGAHASGDIHASAASTVTIGSDTPAELASA
Sbjct  541   VKDTANQYAPAVYLTDGYDLTGDNAALEITRGAHASGDIHASAASTVTIGSDTPAELASA  600

Query  903   etaasafaGSLLEGYNAAFNGAITGGRADVSMHNALWTLGGDSAIHSLTVRNSRISSEGD  962
             ETAASAFAGSLLEGYNAAFNGAITGGRADVSMHNALWTLGGDSAIHSLTVRNSRISSEGD
Sbjct  601   ETAASAFAGSLLEGYNAAFNGAITGGRADVSMHNALWTLGGDSAIHSLTVRNSRISSEGD  660

Query  963   RTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGSDNSLNVSFMNNPAQGQALNIP  1022
             RTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGSDNSLNVSFMNNPAQGQALNIP
Sbjct  661   RTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGSDNSLNVSFMNNPAQGQALNIP  720

Query  1023  LVTAPAGTSAEMFKAGTRVTGFSRVTPTLHVDTSGGNTKWILDGFkaeadkaaaakadSF  1082
             LVTAPAGTSAEMFKAGTRVTGFSRVTPTLHVDTSGGNTKWILDGFKAEADKAAAAKADSF
Sbjct  721   LVTAPAGTSAEMFKAGTRVTGFSRVTPTLHVDTSGGNTKWILDGFKAEADKAAAAKADSF  780

Query  1083  MNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMsgagsadggysdNYTHVQVGFDKK  1142
             MNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMSGAGSADGGYSDNYTHVQVGFDKK
Sbjct  781   MNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMSGAGSADGGYSDNYTHVQVGFDKK  840

Query  1143  HELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYASALFESGAYIDLIGKYIHHDN  1202
             HELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYASALFESGAYIDLIGKYIHHDN
Sbjct  841   HELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYASALFESGAYIDLIGKYIHHDN  900

Query  1203  DYTGNFASLGTKHYNTHSWYAGAETGYRYHLTEDTFIEPQAELVYGAVSGKTFRWKDGDM  1262
             DYTGNFASLGTKHYNTHSWYAGAETGYRYHLTEDTFIEPQAELVYGAVSGKTFRWKDGDM
Sbjct  901   DYTGNFASLGTKHYNTHSWYAGAETGYRYHLTEDTFIEPQAELVYGAVSGKTFRWKDGDM  960

Query  1263  DLSMKNRDFSPLVGRTGVELGKTFSGKDWSVTARAGTSWQFDLLNNGETVLRDASGEKRI  1322
             DLSMKNRDFSPLVGRTGVELGKTFSGKDWSVTARAGTSWQFDLLNNGETVLRDASGEKRI
Sbjct  961   DLSMKNRDFSPLVGRTGVELGKTFSGKDWSVTARAGTSWQFDLLNNGETVLRDASGEKRI  1020

Query  1323  KGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNVDNAVNANFRYMF  1372
             KGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNVDNAVNANFRYMF
Sbjct  1021  KGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNVDNAVNANFRYMF  1070

5) O3K_04520 in NC_018658


> NC_004741_P1|8|G6|30064293|NP_838464.1|Shigella_flexneri_2a_str._2457T|-|15275..18487|pic|S3178|serine 
protease precurser
Length=1070

 Score = 1611 bits (6117),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1070/1070 (100%), Positives = 1070/1070 (100%), Gaps = 0/1070 (0%)

Query  303   MQDDFDAPVDFVSGLGPLNWTYDKTSGTGTLSQGSKNWTMHGQKDNDLNAGKNLVFSGQN  362
             MQDDFDAPVDFVSGLGPLNWTYDKTSGTGTLSQGSKNWTMHGQKDNDLNAGKNLVFSGQN
Sbjct  1     MQDDFDAPVDFVSGLGPLNWTYDKTSGTGTLSQGSKNWTMHGQKDNDLNAGKNLVFSGQN  60

Query  363   GAIILKDSVTQGAGYLEFKDSYTVSAESGKTWTGAGIITDKGTNVTWKVNGVAGDNLHKL  422
             GAIILKDSVTQGAGYLEFKDSYTVSAESGKTWTGAGIITDKGTNVTWKVNGVAGDNLHKL
Sbjct  61    GAIILKDSVTQGAGYLEFKDSYTVSAESGKTWTGAGIITDKGTNVTWKVNGVAGDNLHKL  120

Query  423   GEGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGNIQAFSSVNLASGRPTVVLGDARQVN  482
             GEGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGNIQAFSSVNLASGRPTVVLGDARQVN
Sbjct  121   GEGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGNIQAFSSVNLASGRPTVVLGDARQVN  180

Query  483   PDNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKSQLLLDLKAQDTNVSEPTI  542
             PDNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKSQLLLDLKAQDTNVSEPTI
Sbjct  181   PDNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKSQLLLDLKAQDTNVSEPTI  240

Query  543   GNISPFGGTGTPGNLYSMILNSQTRFYILKSASYGNTLWGNSLNDPAQWEFVGMNKNKAV  602
             GNISPFGGTGTPGNLYSMILNSQTRFYILKSASYGNTLWGNSLNDPAQWEFVGMNKNKAV
Sbjct  241   GNISPFGGTGTPGNLYSMILNSQTRFYILKSASYGNTLWGNSLNDPAQWEFVGMNKNKAV  300

Query  603   QTVKDRILAGRAKQPVIFHGQLTGNMDVAIPQVPGGRKVIFDGSVNLPEGTLSQDSGTLI  662
             QTVKDRILAGRAKQPVIFHGQLTGNMDVAIPQVPGGRKVIFDGSVNLPEGTLSQDSGTLI
Sbjct  301   QTVKDRILAGRAKQPVIFHGQLTGNMDVAIPQVPGGRKVIFDGSVNLPEGTLSQDSGTLI  360

Query  663   FQGHPVIHASISGSAPVSLNQKDWENRQFTMKTLSLKDADFHLSRNASLNSDIKSDNSHI  722
             FQGHPVIHASISGSAPVSLNQKDWENRQFTMKTLSLKDADFHLSRNASLNSDIKSDNSHI
Sbjct  361   FQGHPVIHASISGSAPVSLNQKDWENRQFTMKTLSLKDADFHLSRNASLNSDIKSDNSHI  420

Query  723   TLGSDRAFVDKNDGTGNYVIPEEGTSVPDTVNDRSQYEGNITLNHNSALDIGSRFTGGID  782
             TLGSDRAFVDKNDGTGNYVIPEEGTSVPDTVNDRSQYEGNITLNHNSALDIGSRFTGGID
Sbjct  421   TLGSDRAFVDKNDGTGNYVIPEEGTSVPDTVNDRSQYEGNITLNHNSALDIGSRFTGGID  480

Query  783   AYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLTALNGLFSDGHIQAGKNGKITLSGTP  842
             AYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLTALNGLFSDGHIQAGKNGKITLSGTP
Sbjct  481   AYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLTALNGLFSDGHIQAGKNGKITLSGTP  540

Query  843   VKDTANQYAPAVYLTDGYDLTGDNAALEITRGAHASGDIHASAASTVTIGSDTPaelasa  902
             VKDTANQYAPAVYLTDGYDLTGDNAALEITRGAHASGDIHASAASTVTIGSDTPAELASA
Sbjct  541   VKDTANQYAPAVYLTDGYDLTGDNAALEITRGAHASGDIHASAASTVTIGSDTPAELASA  600

Query  903   etaasafaGSLLEGYNAAFNGAITGGRADVSMHNALWTLGGDSAIHSLTVRNSRISSEGD  962
             ETAASAFAGSLLEGYNAAFNGAITGGRADVSMHNALWTLGGDSAIHSLTVRNSRISSEGD
Sbjct  601   ETAASAFAGSLLEGYNAAFNGAITGGRADVSMHNALWTLGGDSAIHSLTVRNSRISSEGD  660

Query  963   RTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGSDNSLNVSFMNNPAQGQALNIP  1022
             RTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGSDNSLNVSFMNNPAQGQALNIP
Sbjct  661   RTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGSDNSLNVSFMNNPAQGQALNIP  720

Query  1023  LVTAPAGTSAEMFKAGTRVTGFSRVTPTLHVDTSGGNTKWILDGFkaeadkaaaakadSF  1082
             LVTAPAGTSAEMFKAGTRVTGFSRVTPTLHVDTSGGNTKWILDGFKAEADKAAAAKADSF
Sbjct  721   LVTAPAGTSAEMFKAGTRVTGFSRVTPTLHVDTSGGNTKWILDGFKAEADKAAAAKADSF  780

Query  1083  MNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMsgagsadggysdNYTHVQVGFDKK  1142
             MNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMSGAGSADGGYSDNYTHVQVGFDKK
Sbjct  781   MNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMSGAGSADGGYSDNYTHVQVGFDKK  840

Query  1143  HELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYASALFESGAYIDLIGKYIHHDN  1202
             HELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYASALFESGAYIDLIGKYIHHDN
Sbjct  841   HELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYASALFESGAYIDLIGKYIHHDN  900

Query  1203  DYTGNFASLGTKHYNTHSWYAGAETGYRYHLTEDTFIEPQAELVYGAVSGKTFRWKDGDM  1262
             DYTGNFASLGTKHYNTHSWYAGAETGYRYHLTEDTFIEPQAELVYGAVSGKTFRWKDGDM
Sbjct  901   DYTGNFASLGTKHYNTHSWYAGAETGYRYHLTEDTFIEPQAELVYGAVSGKTFRWKDGDM  960

Query  1263  DLSMKNRDFSPLVGRTGVELGKTFSGKDWSVTARAGTSWQFDLLNNGETVLRDASGEKRI  1322
             DLSMKNRDFSPLVGRTGVELGKTFSGKDWSVTARAGTSWQFDLLNNGETVLRDASGEKRI
Sbjct  961   DLSMKNRDFSPLVGRTGVELGKTFSGKDWSVTARAGTSWQFDLLNNGETVLRDASGEKRI  1020

Query  1323  KGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNVDNAVNANFRYMF  1372
             KGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNVDNAVNANFRYMF
Sbjct  1021  KGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNVDNAVNANFRYMF  1070

6) O3K_23140 in NC_018658


> NC_004741_P1|8|G6|30064293|NP_838464.1|Shigella_flexneri_2a_str._2457T|-|15275..18487|pic|S3178|serine 
protease precurser
Length=1070

 Score = 1611 bits (6117),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1070/1070 (100%), Positives = 1070/1070 (100%), Gaps = 0/1070 (0%)

Query  303   MQDDFDAPVDFVSGLGPLNWTYDKTSGTGTLSQGSKNWTMHGQKDNDLNAGKNLVFSGQN  362
             MQDDFDAPVDFVSGLGPLNWTYDKTSGTGTLSQGSKNWTMHGQKDNDLNAGKNLVFSGQN
Sbjct  1     MQDDFDAPVDFVSGLGPLNWTYDKTSGTGTLSQGSKNWTMHGQKDNDLNAGKNLVFSGQN  60

Query  363   GAIILKDSVTQGAGYLEFKDSYTVSAESGKTWTGAGIITDKGTNVTWKVNGVAGDNLHKL  422
             GAIILKDSVTQGAGYLEFKDSYTVSAESGKTWTGAGIITDKGTNVTWKVNGVAGDNLHKL
Sbjct  61    GAIILKDSVTQGAGYLEFKDSYTVSAESGKTWTGAGIITDKGTNVTWKVNGVAGDNLHKL  120

Query  423   GEGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGNIQAFSSVNLASGRPTVVLGDARQVN  482
             GEGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGNIQAFSSVNLASGRPTVVLGDARQVN
Sbjct  121   GEGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGNIQAFSSVNLASGRPTVVLGDARQVN  180

Query  483   PDNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKSQLLLDLKAQDTNVSEPTI  542
             PDNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKSQLLLDLKAQDTNVSEPTI
Sbjct  181   PDNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKSQLLLDLKAQDTNVSEPTI  240

Query  543   GNISPFGGTGTPGNLYSMILNSQTRFYILKSASYGNTLWGNSLNDPAQWEFVGMNKNKAV  602
             GNISPFGGTGTPGNLYSMILNSQTRFYILKSASYGNTLWGNSLNDPAQWEFVGMNKNKAV
Sbjct  241   GNISPFGGTGTPGNLYSMILNSQTRFYILKSASYGNTLWGNSLNDPAQWEFVGMNKNKAV  300

Query  603   QTVKDRILAGRAKQPVIFHGQLTGNMDVAIPQVPGGRKVIFDGSVNLPEGTLSQDSGTLI  662
             QTVKDRILAGRAKQPVIFHGQLTGNMDVAIPQVPGGRKVIFDGSVNLPEGTLSQDSGTLI
Sbjct  301   QTVKDRILAGRAKQPVIFHGQLTGNMDVAIPQVPGGRKVIFDGSVNLPEGTLSQDSGTLI  360

Query  663   FQGHPVIHASISGSAPVSLNQKDWENRQFTMKTLSLKDADFHLSRNASLNSDIKSDNSHI  722
             FQGHPVIHASISGSAPVSLNQKDWENRQFTMKTLSLKDADFHLSRNASLNSDIKSDNSHI
Sbjct  361   FQGHPVIHASISGSAPVSLNQKDWENRQFTMKTLSLKDADFHLSRNASLNSDIKSDNSHI  420

Query  723   TLGSDRAFVDKNDGTGNYVIPEEGTSVPDTVNDRSQYEGNITLNHNSALDIGSRFTGGID  782
             TLGSDRAFVDKNDGTGNYVIPEEGTSVPDTVNDRSQYEGNITLNHNSALDIGSRFTGGID
Sbjct  421   TLGSDRAFVDKNDGTGNYVIPEEGTSVPDTVNDRSQYEGNITLNHNSALDIGSRFTGGID  480

Query  783   AYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLTALNGLFSDGHIQAGKNGKITLSGTP  842
             AYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLTALNGLFSDGHIQAGKNGKITLSGTP
Sbjct  481   AYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLTALNGLFSDGHIQAGKNGKITLSGTP  540

Query  843   VKDTANQYAPAVYLTDGYDLTGDNAALEITRGAHASGDIHASAASTVTIGSDTPaelasa  902
             VKDTANQYAPAVYLTDGYDLTGDNAALEITRGAHASGDIHASAASTVTIGSDTPAELASA
Sbjct  541   VKDTANQYAPAVYLTDGYDLTGDNAALEITRGAHASGDIHASAASTVTIGSDTPAELASA  600

Query  903   etaasafaGSLLEGYNAAFNGAITGGRADVSMHNALWTLGGDSAIHSLTVRNSRISSEGD  962
             ETAASAFAGSLLEGYNAAFNGAITGGRADVSMHNALWTLGGDSAIHSLTVRNSRISSEGD
Sbjct  601   ETAASAFAGSLLEGYNAAFNGAITGGRADVSMHNALWTLGGDSAIHSLTVRNSRISSEGD  660

Query  963   RTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGSDNSLNVSFMNNPAQGQALNIP  1022
             RTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGSDNSLNVSFMNNPAQGQALNIP
Sbjct  661   RTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGSDNSLNVSFMNNPAQGQALNIP  720

Query  1023  LVTAPAGTSAEMFKAGTRVTGFSRVTPTLHVDTSGGNTKWILDGFkaeadkaaaakadSF  1082
             LVTAPAGTSAEMFKAGTRVTGFSRVTPTLHVDTSGGNTKWILDGFKAEADKAAAAKADSF
Sbjct  721   LVTAPAGTSAEMFKAGTRVTGFSRVTPTLHVDTSGGNTKWILDGFKAEADKAAAAKADSF  780

Query  1083  MNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMsgagsadggysdNYTHVQVGFDKK  1142
             MNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMSGAGSADGGYSDNYTHVQVGFDKK
Sbjct  781   MNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMSGAGSADGGYSDNYTHVQVGFDKK  840

Query  1143  HELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYASALFESGAYIDLIGKYIHHDN  1202
             HELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYASALFESGAYIDLIGKYIHHDN
Sbjct  841   HELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYASALFESGAYIDLIGKYIHHDN  900

Query  1203  DYTGNFASLGTKHYNTHSWYAGAETGYRYHLTEDTFIEPQAELVYGAVSGKTFRWKDGDM  1262
             DYTGNFASLGTKHYNTHSWYAGAETGYRYHLTEDTFIEPQAELVYGAVSGKTFRWKDGDM
Sbjct  901   DYTGNFASLGTKHYNTHSWYAGAETGYRYHLTEDTFIEPQAELVYGAVSGKTFRWKDGDM  960

Query  1263  DLSMKNRDFSPLVGRTGVELGKTFSGKDWSVTARAGTSWQFDLLNNGETVLRDASGEKRI  1322
             DLSMKNRDFSPLVGRTGVELGKTFSGKDWSVTARAGTSWQFDLLNNGETVLRDASGEKRI
Sbjct  961   DLSMKNRDFSPLVGRTGVELGKTFSGKDWSVTARAGTSWQFDLLNNGETVLRDASGEKRI  1020

Query  1323  KGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNVDNAVNANFRYMF  1372
             KGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNVDNAVNANFRYMF
Sbjct  1021  KGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNVDNAVNANFRYMF  1070

7) SFxv_3258 in NC_017328


> NC_004741_P1|8|G6|30064293|NP_838464.1|Shigella_flexneri_2a_str._2457T|-|15275..18487|pic|S3178|serine 
protease precurser
Length=1070

 Score = 1611 bits (6117),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1070/1070 (100%), Positives = 1070/1070 (100%), Gaps = 0/1070 (0%)

Query  303   MQDDFDAPVDFVSGLGPLNWTYDKTSGTGTLSQGSKNWTMHGQKDNDLNAGKNLVFSGQN  362
             MQDDFDAPVDFVSGLGPLNWTYDKTSGTGTLSQGSKNWTMHGQKDNDLNAGKNLVFSGQN
Sbjct  1     MQDDFDAPVDFVSGLGPLNWTYDKTSGTGTLSQGSKNWTMHGQKDNDLNAGKNLVFSGQN  60

Query  363   GAIILKDSVTQGAGYLEFKDSYTVSAESGKTWTGAGIITDKGTNVTWKVNGVAGDNLHKL  422
             GAIILKDSVTQGAGYLEFKDSYTVSAESGKTWTGAGIITDKGTNVTWKVNGVAGDNLHKL
Sbjct  61    GAIILKDSVTQGAGYLEFKDSYTVSAESGKTWTGAGIITDKGTNVTWKVNGVAGDNLHKL  120

Query  423   GEGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGNIQAFSSVNLASGRPTVVLGDARQVN  482
             GEGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGNIQAFSSVNLASGRPTVVLGDARQVN
Sbjct  121   GEGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGNIQAFSSVNLASGRPTVVLGDARQVN  180

Query  483   PDNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKSQLLLDLKAQDTNVSEPTI  542
             PDNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKSQLLLDLKAQDTNVSEPTI
Sbjct  181   PDNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKSQLLLDLKAQDTNVSEPTI  240

Query  543   GNISPFGGTGTPGNLYSMILNSQTRFYILKSASYGNTLWGNSLNDPAQWEFVGMNKNKAV  602
             GNISPFGGTGTPGNLYSMILNSQTRFYILKSASYGNTLWGNSLNDPAQWEFVGMNKNKAV
Sbjct  241   GNISPFGGTGTPGNLYSMILNSQTRFYILKSASYGNTLWGNSLNDPAQWEFVGMNKNKAV  300

Query  603   QTVKDRILAGRAKQPVIFHGQLTGNMDVAIPQVPGGRKVIFDGSVNLPEGTLSQDSGTLI  662
             QTVKDRILAGRAKQPVIFHGQLTGNMDVAIPQVPGGRKVIFDGSVNLPEGTLSQDSGTLI
Sbjct  301   QTVKDRILAGRAKQPVIFHGQLTGNMDVAIPQVPGGRKVIFDGSVNLPEGTLSQDSGTLI  360

Query  663   FQGHPVIHASISGSAPVSLNQKDWENRQFTMKTLSLKDADFHLSRNASLNSDIKSDNSHI  722
             FQGHPVIHASISGSAPVSLNQKDWENRQFTMKTLSLKDADFHLSRNASLNSDIKSDNSHI
Sbjct  361   FQGHPVIHASISGSAPVSLNQKDWENRQFTMKTLSLKDADFHLSRNASLNSDIKSDNSHI  420

Query  723   TLGSDRAFVDKNDGTGNYVIPEEGTSVPDTVNDRSQYEGNITLNHNSALDIGSRFTGGID  782
             TLGSDRAFVDKNDGTGNYVIPEEGTSVPDTVNDRSQYEGNITLNHNSALDIGSRFTGGID
Sbjct  421   TLGSDRAFVDKNDGTGNYVIPEEGTSVPDTVNDRSQYEGNITLNHNSALDIGSRFTGGID  480

Query  783   AYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLTALNGLFSDGHIQAGKNGKITLSGTP  842
             AYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLTALNGLFSDGHIQAGKNGKITLSGTP
Sbjct  481   AYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLTALNGLFSDGHIQAGKNGKITLSGTP  540

Query  843   VKDTANQYAPAVYLTDGYDLTGDNAALEITRGAHASGDIHASAASTVTIGSDTPaelasa  902
             VKDTANQYAPAVYLTDGYDLTGDNAALEITRGAHASGDIHASAASTVTIGSDTPAELASA
Sbjct  541   VKDTANQYAPAVYLTDGYDLTGDNAALEITRGAHASGDIHASAASTVTIGSDTPAELASA  600

Query  903   etaasafaGSLLEGYNAAFNGAITGGRADVSMHNALWTLGGDSAIHSLTVRNSRISSEGD  962
             ETAASAFAGSLLEGYNAAFNGAITGGRADVSMHNALWTLGGDSAIHSLTVRNSRISSEGD
Sbjct  601   ETAASAFAGSLLEGYNAAFNGAITGGRADVSMHNALWTLGGDSAIHSLTVRNSRISSEGD  660

Query  963   RTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGSDNSLNVSFMNNPAQGQALNIP  1022
             RTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGSDNSLNVSFMNNPAQGQALNIP
Sbjct  661   RTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGSDNSLNVSFMNNPAQGQALNIP  720

Query  1023  LVTAPAGTSAEMFKAGTRVTGFSRVTPTLHVDTSGGNTKWILDGFkaeadkaaaakadSF  1082
             LVTAPAGTSAEMFKAGTRVTGFSRVTPTLHVDTSGGNTKWILDGFKAEADKAAAAKADSF
Sbjct  721   LVTAPAGTSAEMFKAGTRVTGFSRVTPTLHVDTSGGNTKWILDGFKAEADKAAAAKADSF  780

Query  1083  MNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMsgagsadggysdNYTHVQVGFDKK  1142
             MNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMSGAGSADGGYSDNYTHVQVGFDKK
Sbjct  781   MNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMSGAGSADGGYSDNYTHVQVGFDKK  840

Query  1143  HELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYASALFESGAYIDLIGKYIHHDN  1202
             HELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYASALFESGAYIDLIGKYIHHDN
Sbjct  841   HELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYASALFESGAYIDLIGKYIHHDN  900

Query  1203  DYTGNFASLGTKHYNTHSWYAGAETGYRYHLTEDTFIEPQAELVYGAVSGKTFRWKDGDM  1262
             DYTGNFASLGTKHYNTHSWYAGAETGYRYHLTEDTFIEPQAELVYGAVSGKTFRWKDGDM
Sbjct  901   DYTGNFASLGTKHYNTHSWYAGAETGYRYHLTEDTFIEPQAELVYGAVSGKTFRWKDGDM  960

Query  1263  DLSMKNRDFSPLVGRTGVELGKTFSGKDWSVTARAGTSWQFDLLNNGETVLRDASGEKRI  1322
             DLSMKNRDFSPLVGRTGVELGKTFSGKDWSVTARAGTSWQFDLLNNGETVLRDASGEKRI
Sbjct  961   DLSMKNRDFSPLVGRTGVELGKTFSGKDWSVTARAGTSWQFDLLNNGETVLRDASGEKRI  1020

Query  1323  KGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNVDNAVNANFRYMF  1372
             KGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNVDNAVNANFRYMF
Sbjct  1021  KGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNVDNAVNANFRYMF  1070

8) pic in NC_004337


> NC_004741_P1|8|G6|30064293|NP_838464.1|Shigella_flexneri_2a_str._2457T|-|15275..18487|pic|S3178|serine 
protease precurser
Length=1070

 Score = 1611 bits (6117),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1070/1070 (100%), Positives = 1070/1070 (100%), Gaps = 0/1070 (0%)

Query  303   MQDDFDAPVDFVSGLGPLNWTYDKTSGTGTLSQGSKNWTMHGQKDNDLNAGKNLVFSGQN  362
             MQDDFDAPVDFVSGLGPLNWTYDKTSGTGTLSQGSKNWTMHGQKDNDLNAGKNLVFSGQN
Sbjct  1     MQDDFDAPVDFVSGLGPLNWTYDKTSGTGTLSQGSKNWTMHGQKDNDLNAGKNLVFSGQN  60

Query  363   GAIILKDSVTQGAGYLEFKDSYTVSAESGKTWTGAGIITDKGTNVTWKVNGVAGDNLHKL  422
             GAIILKDSVTQGAGYLEFKDSYTVSAESGKTWTGAGIITDKGTNVTWKVNGVAGDNLHKL
Sbjct  61    GAIILKDSVTQGAGYLEFKDSYTVSAESGKTWTGAGIITDKGTNVTWKVNGVAGDNLHKL  120

Query  423   GEGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGNIQAFSSVNLASGRPTVVLGDARQVN  482
             GEGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGNIQAFSSVNLASGRPTVVLGDARQVN
Sbjct  121   GEGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGNIQAFSSVNLASGRPTVVLGDARQVN  180

Query  483   PDNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKSQLLLDLKAQDTNVSEPTI  542
             PDNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKSQLLLDLKAQDTNVSEPTI
Sbjct  181   PDNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKSQLLLDLKAQDTNVSEPTI  240

Query  543   GNISPFGGTGTPGNLYSMILNSQTRFYILKSASYGNTLWGNSLNDPAQWEFVGMNKNKAV  602
             GNISPFGGTGTPGNLYSMILNSQTRFYILKSASYGNTLWGNSLNDPAQWEFVGMNKNKAV
Sbjct  241   GNISPFGGTGTPGNLYSMILNSQTRFYILKSASYGNTLWGNSLNDPAQWEFVGMNKNKAV  300

Query  603   QTVKDRILAGRAKQPVIFHGQLTGNMDVAIPQVPGGRKVIFDGSVNLPEGTLSQDSGTLI  662
             QTVKDRILAGRAKQPVIFHGQLTGNMDVAIPQVPGGRKVIFDGSVNLPEGTLSQDSGTLI
Sbjct  301   QTVKDRILAGRAKQPVIFHGQLTGNMDVAIPQVPGGRKVIFDGSVNLPEGTLSQDSGTLI  360

Query  663   FQGHPVIHASISGSAPVSLNQKDWENRQFTMKTLSLKDADFHLSRNASLNSDIKSDNSHI  722
             FQGHPVIHASISGSAPVSLNQKDWENRQFTMKTLSLKDADFHLSRNASLNSDIKSDNSHI
Sbjct  361   FQGHPVIHASISGSAPVSLNQKDWENRQFTMKTLSLKDADFHLSRNASLNSDIKSDNSHI  420

Query  723   TLGSDRAFVDKNDGTGNYVIPEEGTSVPDTVNDRSQYEGNITLNHNSALDIGSRFTGGID  782
             TLGSDRAFVDKNDGTGNYVIPEEGTSVPDTVNDRSQYEGNITLNHNSALDIGSRFTGGID
Sbjct  421   TLGSDRAFVDKNDGTGNYVIPEEGTSVPDTVNDRSQYEGNITLNHNSALDIGSRFTGGID  480

Query  783   AYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLTALNGLFSDGHIQAGKNGKITLSGTP  842
             AYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLTALNGLFSDGHIQAGKNGKITLSGTP
Sbjct  481   AYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLTALNGLFSDGHIQAGKNGKITLSGTP  540

Query  843   VKDTANQYAPAVYLTDGYDLTGDNAALEITRGAHASGDIHASAASTVTIGSDTPaelasa  902
             VKDTANQYAPAVYLTDGYDLTGDNAALEITRGAHASGDIHASAASTVTIGSDTPAELASA
Sbjct  541   VKDTANQYAPAVYLTDGYDLTGDNAALEITRGAHASGDIHASAASTVTIGSDTPAELASA  600

Query  903   etaasafaGSLLEGYNAAFNGAITGGRADVSMHNALWTLGGDSAIHSLTVRNSRISSEGD  962
             ETAASAFAGSLLEGYNAAFNGAITGGRADVSMHNALWTLGGDSAIHSLTVRNSRISSEGD
Sbjct  601   ETAASAFAGSLLEGYNAAFNGAITGGRADVSMHNALWTLGGDSAIHSLTVRNSRISSEGD  660

Query  963   RTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGSDNSLNVSFMNNPAQGQALNIP  1022
             RTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGSDNSLNVSFMNNPAQGQALNIP
Sbjct  661   RTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGSDNSLNVSFMNNPAQGQALNIP  720

Query  1023  LVTAPAGTSAEMFKAGTRVTGFSRVTPTLHVDTSGGNTKWILDGFkaeadkaaaakadSF  1082
             LVTAPAGTSAEMFKAGTRVTGFSRVTPTLHVDTSGGNTKWILDGFKAEADKAAAAKADSF
Sbjct  721   LVTAPAGTSAEMFKAGTRVTGFSRVTPTLHVDTSGGNTKWILDGFKAEADKAAAAKADSF  780

Query  1083  MNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMsgagsadggysdNYTHVQVGFDKK  1142
             MNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMSGAGSADGGYSDNYTHVQVGFDKK
Sbjct  781   MNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMSGAGSADGGYSDNYTHVQVGFDKK  840

Query  1143  HELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYASALFESGAYIDLIGKYIHHDN  1202
             HELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYASALFESGAYIDLIGKYIHHDN
Sbjct  841   HELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYASALFESGAYIDLIGKYIHHDN  900

Query  1203  DYTGNFASLGTKHYNTHSWYAGAETGYRYHLTEDTFIEPQAELVYGAVSGKTFRWKDGDM  1262
             DYTGNFASLGTKHYNTHSWYAGAETGYRYHLTEDTFIEPQAELVYGAVSGKTFRWKDGDM
Sbjct  901   DYTGNFASLGTKHYNTHSWYAGAETGYRYHLTEDTFIEPQAELVYGAVSGKTFRWKDGDM  960

Query  1263  DLSMKNRDFSPLVGRTGVELGKTFSGKDWSVTARAGTSWQFDLLNNGETVLRDASGEKRI  1322
             DLSMKNRDFSPLVGRTGVELGKTFSGKDWSVTARAGTSWQFDLLNNGETVLRDASGEKRI
Sbjct  961   DLSMKNRDFSPLVGRTGVELGKTFSGKDWSVTARAGTSWQFDLLNNGETVLRDASGEKRI  1020

Query  1323  KGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNVDNAVNANFRYMF  1372
             KGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNVDNAVNANFRYMF
Sbjct  1021  KGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNVDNAVNANFRYMF  1070

9) pic in NC_017626


> NC_004741_P1|8|G6|30064293|NP_838464.1|Shigella_flexneri_2a_str._2457T|-|15275..18487|pic|S3178|serine 
protease precurser
Length=1070

 Score = 1611 bits (6116),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1069/1070 (99%), Positives = 1070/1070 (100%), Gaps = 0/1070 (0%)

Query  303   MQDDFDAPVDFVSGLGPLNWTYDKTSGTGTLSQGSKNWTMHGQKDNDLNAGKNLVFSGQN  362
             MQDDFDAPVDFVSGLGPLNWTYDKTSGTGTLSQGSKNWTMHGQKDNDLNAGKNLVFSGQN
Sbjct  1     MQDDFDAPVDFVSGLGPLNWTYDKTSGTGTLSQGSKNWTMHGQKDNDLNAGKNLVFSGQN  60

Query  363   GAIILKDSVTQGAGYLEFKDSYTVSAESGKTWTGAGIITDKGTNVTWKVNGVAGDNLHKL  422
             GAIILKDSVTQGAGYLEFKDSYTVSAESGKTWTGAGIITDKGTNVTWKVNGVAGDNLHKL
Sbjct  61    GAIILKDSVTQGAGYLEFKDSYTVSAESGKTWTGAGIITDKGTNVTWKVNGVAGDNLHKL  120

Query  423   GEGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGNIQAFSSVNLASGRPTVVLGDARQVN  482
             GEGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGNIQAFSSVNLASGRPTVVLGDARQVN
Sbjct  121   GEGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGNIQAFSSVNLASGRPTVVLGDARQVN  180

Query  483   PDNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKSQLLLDLKAQDTNVSEPTI  542
             PDNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKSQLLLDLKAQDTNVSEPTI
Sbjct  181   PDNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKSQLLLDLKAQDTNVSEPTI  240

Query  543   GNISPFGGTGTPGNLYSMILNSQTRFYILKSASYGNTLWGNSLNDPAQWEFVGMDKNKAV  602
             GNISPFGGTGTPGNLYSMILNSQTRFYILKSASYGNTLWGNSLNDPAQWEFVGM+KNKAV
Sbjct  241   GNISPFGGTGTPGNLYSMILNSQTRFYILKSASYGNTLWGNSLNDPAQWEFVGMNKNKAV  300

Query  603   QTVKDRILAGRAKQPVIFHGQLTGNMDVAIPQVPGGRKVIFDGSVNLPEGTLSQDSGTLI  662
             QTVKDRILAGRAKQPVIFHGQLTGNMDVAIPQVPGGRKVIFDGSVNLPEGTLSQDSGTLI
Sbjct  301   QTVKDRILAGRAKQPVIFHGQLTGNMDVAIPQVPGGRKVIFDGSVNLPEGTLSQDSGTLI  360

Query  663   FQGHPVIHASISGSAPVSLNQKDWENRQFTMKTLSLKDADFHLSRNASLNSDIKSDNSHI  722
             FQGHPVIHASISGSAPVSLNQKDWENRQFTMKTLSLKDADFHLSRNASLNSDIKSDNSHI
Sbjct  361   FQGHPVIHASISGSAPVSLNQKDWENRQFTMKTLSLKDADFHLSRNASLNSDIKSDNSHI  420

Query  723   TLGSDRAFVDKNDGTGNYVIPEEGTSVPDTVNDRSQYEGNITLNHNSALDIGSRFTGGID  782
             TLGSDRAFVDKNDGTGNYVIPEEGTSVPDTVNDRSQYEGNITLNHNSALDIGSRFTGGID
Sbjct  421   TLGSDRAFVDKNDGTGNYVIPEEGTSVPDTVNDRSQYEGNITLNHNSALDIGSRFTGGID  480

Query  783   AYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLTALNGLFSDGHIQAGKNGKITLSGTP  842
             AYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLTALNGLFSDGHIQAGKNGKITLSGTP
Sbjct  481   AYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLTALNGLFSDGHIQAGKNGKITLSGTP  540

Query  843   VKDTANQYAPAVYLTDGYDLTGDNAALEITRGAHASGDIHASAASTVTIGSDTPaelasa  902
             VKDTANQYAPAVYLTDGYDLTGDNAALEITRGAHASGDIHASAASTVTIGSDTPAELASA
Sbjct  541   VKDTANQYAPAVYLTDGYDLTGDNAALEITRGAHASGDIHASAASTVTIGSDTPAELASA  600

Query  903   etaasafaGSLLEGYNAAFNGAITGGRADVSMHNALWTLGGDSAIHSLTVRNSRISSEGD  962
             ETAASAFAGSLLEGYNAAFNGAITGGRADVSMHNALWTLGGDSAIHSLTVRNSRISSEGD
Sbjct  601   ETAASAFAGSLLEGYNAAFNGAITGGRADVSMHNALWTLGGDSAIHSLTVRNSRISSEGD  660

Query  963   RTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGSDNSLNVSFMNNPAQGQALNIP  1022
             RTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGSDNSLNVSFMNNPAQGQALNIP
Sbjct  661   RTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGSDNSLNVSFMNNPAQGQALNIP  720

Query  1023  LVTAPAGTSAEMFKAGTRVTGFSRVTPTLHVDTSGGNTKWILDGFkaeadkaaaakadSF  1082
             LVTAPAGTSAEMFKAGTRVTGFSRVTPTLHVDTSGGNTKWILDGFKAEADKAAAAKADSF
Sbjct  721   LVTAPAGTSAEMFKAGTRVTGFSRVTPTLHVDTSGGNTKWILDGFKAEADKAAAAKADSF  780

Query  1083  MNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMsgagsadggysdNYTHVQVGFDKK  1142
             MNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMSGAGSADGGYSDNYTHVQVGFDKK
Sbjct  781   MNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMSGAGSADGGYSDNYTHVQVGFDKK  840

Query  1143  HELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYASALFESGAYIDLIGKYIHHDN  1202
             HELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYASALFESGAYIDLIGKYIHHDN
Sbjct  841   HELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYASALFESGAYIDLIGKYIHHDN  900

Query  1203  DYTGNFASLGTKHYNTHSWYAGAETGYRYHLTEDTFIEPQAELVYGAVSGKTFRWKDGDM  1262
             DYTGNFASLGTKHYNTHSWYAGAETGYRYHLTEDTFIEPQAELVYGAVSGKTFRWKDGDM
Sbjct  901   DYTGNFASLGTKHYNTHSWYAGAETGYRYHLTEDTFIEPQAELVYGAVSGKTFRWKDGDM  960

Query  1263  DLSMKNRDFSPLVGRTGVELGKTFSGKDWSVTARAGTSWQFDLLNNGETVLRDASGEKRI  1322
             DLSMKNRDFSPLVGRTGVELGKTFSGKDWSVTARAGTSWQFDLLNNGETVLRDASGEKRI
Sbjct  961   DLSMKNRDFSPLVGRTGVELGKTFSGKDWSVTARAGTSWQFDLLNNGETVLRDASGEKRI  1020

Query  1323  KGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNVDNAVNANFRYMF  1372
             KGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNVDNAVNANFRYMF
Sbjct  1021  KGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNVDNAVNANFRYMF  1070

10) EC55989_3279 in NC_011748


> NC_004741_P1|8|G6|30064293|NP_838464.1|Shigella_flexneri_2a_str._2457T|-|15275..18487|pic|S3178|serine 
protease precurser
Length=1070

 Score = 1611 bits (6116),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1069/1070 (99%), Positives = 1070/1070 (100%), Gaps = 0/1070 (0%)

Query  303   MQDDFDAPVDFVSGLGPLNWTYDKTSGTGTLSQGSKNWTMHGQKDNDLNAGKNLVFSGQN  362
             MQDDFDAPVDFVSGLGPLNWTYDKTSGTGTLSQGSKNWTMHGQKDNDLNAGKNLVFSGQN
Sbjct  1     MQDDFDAPVDFVSGLGPLNWTYDKTSGTGTLSQGSKNWTMHGQKDNDLNAGKNLVFSGQN  60

Query  363   GAIILKDSVTQGAGYLEFKDSYTVSAESGKTWTGAGIITDKGTNVTWKVNGVAGDNLHKL  422
             GAIILKDSVTQGAGYLEFKDSYTVSAESGKTWTGAGIITDKGTNVTWKVNGVAGDNLHKL
Sbjct  61    GAIILKDSVTQGAGYLEFKDSYTVSAESGKTWTGAGIITDKGTNVTWKVNGVAGDNLHKL  120

Query  423   GEGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGNIQAFSSVNLASGRPTVVLGDARQVN  482
             GEGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGNIQAFSSVNLASGRPTVVLGDARQVN
Sbjct  121   GEGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGNIQAFSSVNLASGRPTVVLGDARQVN  180

Query  483   PDNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKSQLLLDLKAQDTNVSEPTI  542
             PDNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKSQLLLDLKAQDTNVSEPTI
Sbjct  181   PDNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKSQLLLDLKAQDTNVSEPTI  240

Query  543   GNISPFGGTGTPGNLYSMILNSQTRFYILKSASYGNTLWGNSLNDPAQWEFVGMDKNKAV  602
             GNISPFGGTGTPGNLYSMILNSQTRFYILKSASYGNTLWGNSLNDPAQWEFVGM+KNKAV
Sbjct  241   GNISPFGGTGTPGNLYSMILNSQTRFYILKSASYGNTLWGNSLNDPAQWEFVGMNKNKAV  300

Query  603   QTVKDRILAGRAKQPVIFHGQLTGNMDVAIPQVPGGRKVIFDGSVNLPEGTLSQDSGTLI  662
             QTVKDRILAGRAKQPVIFHGQLTGNMDVAIPQVPGGRKVIFDGSVNLPEGTLSQDSGTLI
Sbjct  301   QTVKDRILAGRAKQPVIFHGQLTGNMDVAIPQVPGGRKVIFDGSVNLPEGTLSQDSGTLI  360

Query  663   FQGHPVIHASISGSAPVSLNQKDWENRQFTMKTLSLKDADFHLSRNASLNSDIKSDNSHI  722
             FQGHPVIHASISGSAPVSLNQKDWENRQFTMKTLSLKDADFHLSRNASLNSDIKSDNSHI
Sbjct  361   FQGHPVIHASISGSAPVSLNQKDWENRQFTMKTLSLKDADFHLSRNASLNSDIKSDNSHI  420

Query  723   TLGSDRAFVDKNDGTGNYVIPEEGTSVPDTVNDRSQYEGNITLNHNSALDIGSRFTGGID  782
             TLGSDRAFVDKNDGTGNYVIPEEGTSVPDTVNDRSQYEGNITLNHNSALDIGSRFTGGID
Sbjct  421   TLGSDRAFVDKNDGTGNYVIPEEGTSVPDTVNDRSQYEGNITLNHNSALDIGSRFTGGID  480

Query  783   AYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLTALNGLFSDGHIQAGKNGKITLSGTP  842
             AYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLTALNGLFSDGHIQAGKNGKITLSGTP
Sbjct  481   AYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLTALNGLFSDGHIQAGKNGKITLSGTP  540

Query  843   VKDTANQYAPAVYLTDGYDLTGDNAALEITRGAHASGDIHASAASTVTIGSDTPaelasa  902
             VKDTANQYAPAVYLTDGYDLTGDNAALEITRGAHASGDIHASAASTVTIGSDTPAELASA
Sbjct  541   VKDTANQYAPAVYLTDGYDLTGDNAALEITRGAHASGDIHASAASTVTIGSDTPAELASA  600

Query  903   etaasafaGSLLEGYNAAFNGAITGGRADVSMHNALWTLGGDSAIHSLTVRNSRISSEGD  962
             ETAASAFAGSLLEGYNAAFNGAITGGRADVSMHNALWTLGGDSAIHSLTVRNSRISSEGD
Sbjct  601   ETAASAFAGSLLEGYNAAFNGAITGGRADVSMHNALWTLGGDSAIHSLTVRNSRISSEGD  660

Query  963   RTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGSDNSLNVSFMNNPAQGQALNIP  1022
             RTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGSDNSLNVSFMNNPAQGQALNIP
Sbjct  661   RTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGSDNSLNVSFMNNPAQGQALNIP  720

Query  1023  LVTAPAGTSAEMFKAGTRVTGFSRVTPTLHVDTSGGNTKWILDGFkaeadkaaaakadSF  1082
             LVTAPAGTSAEMFKAGTRVTGFSRVTPTLHVDTSGGNTKWILDGFKAEADKAAAAKADSF
Sbjct  721   LVTAPAGTSAEMFKAGTRVTGFSRVTPTLHVDTSGGNTKWILDGFKAEADKAAAAKADSF  780

Query  1083  MNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMsgagsadggysdNYTHVQVGFDKK  1142
             MNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMSGAGSADGGYSDNYTHVQVGFDKK
Sbjct  781   MNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMSGAGSADGGYSDNYTHVQVGFDKK  840

Query  1143  HELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYASALFESGAYIDLIGKYIHHDN  1202
             HELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYASALFESGAYIDLIGKYIHHDN
Sbjct  841   HELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYASALFESGAYIDLIGKYIHHDN  900

Query  1203  DYTGNFASLGTKHYNTHSWYAGAETGYRYHLTEDTFIEPQAELVYGAVSGKTFRWKDGDM  1262
             DYTGNFASLGTKHYNTHSWYAGAETGYRYHLTEDTFIEPQAELVYGAVSGKTFRWKDGDM
Sbjct  901   DYTGNFASLGTKHYNTHSWYAGAETGYRYHLTEDTFIEPQAELVYGAVSGKTFRWKDGDM  960

Query  1263  DLSMKNRDFSPLVGRTGVELGKTFSGKDWSVTARAGTSWQFDLLNNGETVLRDASGEKRI  1322
             DLSMKNRDFSPLVGRTGVELGKTFSGKDWSVTARAGTSWQFDLLNNGETVLRDASGEKRI
Sbjct  961   DLSMKNRDFSPLVGRTGVELGKTFSGKDWSVTARAGTSWQFDLLNNGETVLRDASGEKRI  1020

Query  1323  KGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNVDNAVNANFRYMF  1372
             KGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNVDNAVNANFRYMF
Sbjct  1021  KGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNVDNAVNANFRYMF  1070

11) EC55989_4660 in NC_011748


> NC_004741_P1|8|G6|30064293|NP_838464.1|Shigella_flexneri_2a_str._2457T|-|15275..18487|pic|S3178|serine 
protease precurser
Length=1070

 Score = 1611 bits (6116),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1069/1070 (99%), Positives = 1070/1070 (100%), Gaps = 0/1070 (0%)

Query  303   MQDDFDAPVDFVSGLGPLNWTYDKTSGTGTLSQGSKNWTMHGQKDNDLNAGKNLVFSGQN  362
             MQDDFDAPVDFVSGLGPLNWTYDKTSGTGTLSQGSKNWTMHGQKDNDLNAGKNLVFSGQN
Sbjct  1     MQDDFDAPVDFVSGLGPLNWTYDKTSGTGTLSQGSKNWTMHGQKDNDLNAGKNLVFSGQN  60

Query  363   GAIILKDSVTQGAGYLEFKDSYTVSAESGKTWTGAGIITDKGTNVTWKVNGVAGDNLHKL  422
             GAIILKDSVTQGAGYLEFKDSYTVSAESGKTWTGAGIITDKGTNVTWKVNGVAGDNLHKL
Sbjct  61    GAIILKDSVTQGAGYLEFKDSYTVSAESGKTWTGAGIITDKGTNVTWKVNGVAGDNLHKL  120

Query  423   GEGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGNIQAFSSVNLASGRPTVVLGDARQVN  482
             GEGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGNIQAFSSVNLASGRPTVVLGDARQVN
Sbjct  121   GEGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGNIQAFSSVNLASGRPTVVLGDARQVN  180

Query  483   PDNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKSQLLLDLKAQDTNVSEPTI  542
             PDNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKSQLLLDLKAQDTNVSEPTI
Sbjct  181   PDNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKSQLLLDLKAQDTNVSEPTI  240

Query  543   GNISPFGGTGTPGNLYSMILNSQTRFYILKSASYGNTLWGNSLNDPAQWEFVGMDKNKAV  602
             GNISPFGGTGTPGNLYSMILNSQTRFYILKSASYGNTLWGNSLNDPAQWEFVGM+KNKAV
Sbjct  241   GNISPFGGTGTPGNLYSMILNSQTRFYILKSASYGNTLWGNSLNDPAQWEFVGMNKNKAV  300

Query  603   QTVKDRILAGRAKQPVIFHGQLTGNMDVAIPQVPGGRKVIFDGSVNLPEGTLSQDSGTLI  662
             QTVKDRILAGRAKQPVIFHGQLTGNMDVAIPQVPGGRKVIFDGSVNLPEGTLSQDSGTLI
Sbjct  301   QTVKDRILAGRAKQPVIFHGQLTGNMDVAIPQVPGGRKVIFDGSVNLPEGTLSQDSGTLI  360

Query  663   FQGHPVIHASISGSAPVSLNQKDWENRQFTMKTLSLKDADFHLSRNASLNSDIKSDNSHI  722
             FQGHPVIHASISGSAPVSLNQKDWENRQFTMKTLSLKDADFHLSRNASLNSDIKSDNSHI
Sbjct  361   FQGHPVIHASISGSAPVSLNQKDWENRQFTMKTLSLKDADFHLSRNASLNSDIKSDNSHI  420

Query  723   TLGSDRAFVDKNDGTGNYVIPEEGTSVPDTVNDRSQYEGNITLNHNSALDIGSRFTGGID  782
             TLGSDRAFVDKNDGTGNYVIPEEGTSVPDTVNDRSQYEGNITLNHNSALDIGSRFTGGID
Sbjct  421   TLGSDRAFVDKNDGTGNYVIPEEGTSVPDTVNDRSQYEGNITLNHNSALDIGSRFTGGID  480

Query  783   AYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLTALNGLFSDGHIQAGKNGKITLSGTP  842
             AYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLTALNGLFSDGHIQAGKNGKITLSGTP
Sbjct  481   AYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLTALNGLFSDGHIQAGKNGKITLSGTP  540

Query  843   VKDTANQYAPAVYLTDGYDLTGDNAALEITRGAHASGDIHASAASTVTIGSDTPaelasa  902
             VKDTANQYAPAVYLTDGYDLTGDNAALEITRGAHASGDIHASAASTVTIGSDTPAELASA
Sbjct  541   VKDTANQYAPAVYLTDGYDLTGDNAALEITRGAHASGDIHASAASTVTIGSDTPAELASA  600

Query  903   etaasafaGSLLEGYNAAFNGAITGGRADVSMHNALWTLGGDSAIHSLTVRNSRISSEGD  962
             ETAASAFAGSLLEGYNAAFNGAITGGRADVSMHNALWTLGGDSAIHSLTVRNSRISSEGD
Sbjct  601   ETAASAFAGSLLEGYNAAFNGAITGGRADVSMHNALWTLGGDSAIHSLTVRNSRISSEGD  660

Query  963   RTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGSDNSLNVSFMNNPAQGQALNIP  1022
             RTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGSDNSLNVSFMNNPAQGQALNIP
Sbjct  661   RTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGSDNSLNVSFMNNPAQGQALNIP  720

Query  1023  LVTAPAGTSAEMFKAGTRVTGFSRVTPTLHVDTSGGNTKWILDGFkaeadkaaaakadSF  1082
             LVTAPAGTSAEMFKAGTRVTGFSRVTPTLHVDTSGGNTKWILDGFKAEADKAAAAKADSF
Sbjct  721   LVTAPAGTSAEMFKAGTRVTGFSRVTPTLHVDTSGGNTKWILDGFKAEADKAAAAKADSF  780

Query  1083  MNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMsgagsadggysdNYTHVQVGFDKK  1142
             MNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMSGAGSADGGYSDNYTHVQVGFDKK
Sbjct  781   MNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMSGAGSADGGYSDNYTHVQVGFDKK  840

Query  1143  HELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYASALFESGAYIDLIGKYIHHDN  1202
             HELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYASALFESGAYIDLIGKYIHHDN
Sbjct  841   HELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYASALFESGAYIDLIGKYIHHDN  900

Query  1203  DYTGNFASLGTKHYNTHSWYAGAETGYRYHLTEDTFIEPQAELVYGAVSGKTFRWKDGDM  1262
             DYTGNFASLGTKHYNTHSWYAGAETGYRYHLTEDTFIEPQAELVYGAVSGKTFRWKDGDM
Sbjct  901   DYTGNFASLGTKHYNTHSWYAGAETGYRYHLTEDTFIEPQAELVYGAVSGKTFRWKDGDM  960

Query  1263  DLSMKNRDFSPLVGRTGVELGKTFSGKDWSVTARAGTSWQFDLLNNGETVLRDASGEKRI  1322
             DLSMKNRDFSPLVGRTGVELGKTFSGKDWSVTARAGTSWQFDLLNNGETVLRDASGEKRI
Sbjct  961   DLSMKNRDFSPLVGRTGVELGKTFSGKDWSVTARAGTSWQFDLLNNGETVLRDASGEKRI  1020

Query  1323  KGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNVDNAVNANFRYMF  1372
             KGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNVDNAVNANFRYMF
Sbjct  1021  KGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNVDNAVNANFRYMF  1070

12) ECABU_c03110 in NC_017631


> NC_004741_P1|8|G6|30064293|NP_838464.1|Shigella_flexneri_2a_str._2457T|-|15275..18487|pic|S3178|serine 
protease precurser
Length=1070

 Score = 1577 bits (5989),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1035/1070 (97%), Positives = 1061/1070 (99%), Gaps = 1/1070 (0%)

Query  303   MQDDFDAPVDFVSGLPPLNWTYDKTSGTGTLSQGSKNWTMHGQKDNDLNAGKNLVFSGQN  362
             MQDDFDAPVDFVSGL PLNWTYDKTSGTGTLSQGSKNWTMHGQKDNDLNAGKNLVFSGQN
Sbjct  1     MQDDFDAPVDFVSGLGPLNWTYDKTSGTGTLSQGSKNWTMHGQKDNDLNAGKNLVFSGQN  60

Query  363   GAIVLKDSVTQGAGYLEFKDSYTVSAESGKTWTGAGIITDKGTNVTWKVNGVAGDNLHKL  422
             GAI+LKDSVTQGAGYLEFKDSYTVSAESGKTWTGAGIITDKGTNVTWKVNGVAGDNLHKL
Sbjct  61    GAIILKDSVTQGAGYLEFKDSYTVSAESGKTWTGAGIITDKGTNVTWKVNGVAGDNLHKL  120

Query  423   GEGTLTINGTGVNPGGLKTGDGTVVLNQQADTAGNVQAFSSVNLASGRPTVVLGDARQVN  482
             GEGTLTINGTGVNPGGLKTGDG VVLNQQADTAGN+QAFSSVNLASGRPTVVLGDARQVN
Sbjct  121   GEGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGNIQAFSSVNLASGRPTVVLGDARQVN  180

Query  483   PDNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKSRLLLDLKAQDTNVSVP-I  541
             PDNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKS+LLLDLKAQDTNVS P I
Sbjct  181   PDNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKSQLLLDLKAQDTNVSEPTI  240

Query  542   GSISPFGGTGTPGNLYSMILNGQTRFYILKSASYGNTLWGNSLNDPAQWEFVGTDKNKAV  601
             G+ISPFGGTGTPGNLYSMILN+QTRFYILKSASYGNTLWGNSLNDPAQWEFVG +KNKAV
Sbjct  241   GNISPFGGTGTPGNLYSMILNSQTRFYILKSASYGNTLWGNSLNDPAQWEFVGMNKNKAV  300

Query  602   QTVKDRILAGRAKQPVIFHGQLTGNMDVTIPQLPGGRKVILDGSVNLPEGTLSEDSGTLI  661
             QTVKDRILAGRAKQPVIFHGQLTGNMDV+IPQ+PGGRKVI+DGSVNLPEGTLS+DSGTLI
Sbjct  301   QTVKDRILAGRAKQPVIFHGQLTGNMDVAIPQVPGGRKVIFDGSVNLPEGTLSQDSGTLI  360

Query  662   FQGHPVIHASVSGSAPVSLNQKDWENRQFIMKTLSLKDADFHLSRNASLNSDIKSDNSHI  721
             FQGHPVIHAS+SGSAPVSLNQKDWENRQF MKTLSLKDADFHLSRNASLNSDIKSDNSHI
Sbjct  361   FQGHPVIHASISGSAPVSLNQKDWENRQFTMKTLSLKDADFHLSRNASLNSDIKSDNSHI  420

Query  722   TLGSDRVFVDKNDGTGNYVILEEGTSVPDTVNDRSQYEGNITLDHNSTLDIGSRFTGGIE  781
             TLGSDR FVDKNDGTGNYVI EEGTSVPDTVNDRSQYEGNITL+HNS+LDIGSRFTGGI+
Sbjct  421   TLGSDRAFVDKNDGTGNYVIPEEGTSVPDTVNDRSQYEGNITLNHNSALDIGSRFTGGID  480

Query  782   AYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLTALNGLFSDGHIQAGKNSKITLSGTP  841
             AYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLTALNGLFSDGHIQAGKN+KITLSGTP
Sbjct  481   AYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLTALNGLFSDGHIQAGKNGKITLSGTP  540

Query  842   VKDTANQYAPAVYLTDGYDLTGDNATLEITRGAHASGDIHASAASTVTIGSDTPaelasa  901
             VKDTANQYAPAVYLTDGYDLTGDNA+LEITRGAHASGDIHASAASTVTIGSDTPAELASA
Sbjct  541   VKDTANQYAPAVYLTDGYDLTGDNAALEITRGAHASGDIHASAASTVTIGSDTPAELASA  600

Query  902   ettasafaGSLLEGYNAAFNGAITGGRADVSMHNALWTLGGDSAIHTLTVRNSRISSEGD  961
             ET+ASAFAGSLLEGYNAAFNGAITGGRADVSMHNALWTLGGDSAIH+LTVRNSRISSEGD
Sbjct  601   ETAASAFAGSLLEGYNAAFNGAITGGRADVSMHNALWTLGGDSAIHSLTVRNSRISSEGD  660

Query  962   RTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGSDNSLNVSFMKDPAQGQSLNIP  1021
             RTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGSDNSLNVSFM++PAQGQ+LNIP
Sbjct  661   RTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGSDNSLNVSFMNNPAQGQALNIP  720

Query  1022  LVTAPAGTSAEMFKAGTRMIGFSRVTPTLHVDTSGGNTKWILDGFkaeadkaaaakadSF  1081
             LVTAPAGTSAEMFKAGTR+ GFSRVTPTLHVDTSGGNTKWILDGFKAEADKAAAAKADSF
Sbjct  721   LVTAPAGTSAEMFKAGTRVTGFSRVTPTLHVDTSGGNTKWILDGFKAEADKAAAAKADSF  780

Query  1082  MNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMsgagsadggysdNYTHVQVGFDKK  1141
             MNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMSGAGSADGGYSDNYTHVQVGFDKK
Sbjct  781   MNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMSGAGSADGGYSDNYTHVQVGFDKK  840

Query  1142  HELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYASALFESGAYIDLIGKYIHHDN  1201
             HELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYASALFESGAYIDLIGKYIHHDN
Sbjct  841   HELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYASALFESGAYIDLIGKYIHHDN  900

Query  1202  DYTGNFAGLGTKHYNTHSWYAGAETGYRYHLTEETFIEPQAELVYGAVSGKTFRWKDGDM  1261
             DYTGNFA+LGTKHYNTHSWYAGAETGYRYHLTE+TFIEPQAELVYGAVSGKTFRWKDGDM
Sbjct  901   DYTGNFASLGTKHYNTHSWYAGAETGYRYHLTEDTFIEPQAELVYGAVSGKTFRWKDGDM  960

Query  1262  DLSMKNRDFSPLIGRTGIELGKTFSGKDWSVTARAGTSWQFDLLNNGETVLRDASGEKRI  1321
             DLSMKNRDFSPL+GRTG+ELGKTFSGKDWSVTARAGTSWQFDLLNNGETVLRDASGEKRI
Sbjct  961   DLSMKNRDFSPLVGRTGVELGKTFSGKDWSVTARAGTSWQFDLLNNGETVLRDASGEKRI  1020

Query  1322  KGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNVDNAVNANFRYMF  1371
             KGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNVDNAVNANFRYMF
Sbjct  1021  KGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNVDNAVNANFRYMF  1070

13) c0350 in NC_004431


> NC_004741_P1|8|G6|30064293|NP_838464.1|Shigella_flexneri_2a_str._2457T|-|15275..18487|pic|S3178|serine 
protease precurser
Length=1070

 Score = 1577 bits (5989),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1035/1070 (97%), Positives = 1061/1070 (99%), Gaps = 1/1070 (0%)

Query  303   MQDDFDAPVDFVSGLPPLNWTYDKTSGTGTLSQGSKNWTMHGQKDNDLNAGKNLVFSGQN  362
             MQDDFDAPVDFVSGL PLNWTYDKTSGTGTLSQGSKNWTMHGQKDNDLNAGKNLVFSGQN
Sbjct  1     MQDDFDAPVDFVSGLGPLNWTYDKTSGTGTLSQGSKNWTMHGQKDNDLNAGKNLVFSGQN  60

Query  363   GAIVLKDSVTQGAGYLEFKDSYTVSAESGKTWTGAGIITDKGTNVTWKVNGVAGDNLHKL  422
             GAI+LKDSVTQGAGYLEFKDSYTVSAESGKTWTGAGIITDKGTNVTWKVNGVAGDNLHKL
Sbjct  61    GAIILKDSVTQGAGYLEFKDSYTVSAESGKTWTGAGIITDKGTNVTWKVNGVAGDNLHKL  120

Query  423   GEGTLTINGTGVNPGGLKTGDGTVVLNQQADTAGNVQAFSSVNLASGRPTVVLGDARQVN  482
             GEGTLTINGTGVNPGGLKTGDG VVLNQQADTAGN+QAFSSVNLASGRPTVVLGDARQVN
Sbjct  121   GEGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGNIQAFSSVNLASGRPTVVLGDARQVN  180

Query  483   PDNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKSRLLLDLKAQDTNVSVP-I  541
             PDNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKS+LLLDLKAQDTNVS P I
Sbjct  181   PDNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKSQLLLDLKAQDTNVSEPTI  240

Query  542   GSISPFGGTGTPGNLYSMILNGQTRFYILKSASYGNTLWGNSLNDPAQWEFVGTDKNKAV  601
             G+ISPFGGTGTPGNLYSMILN+QTRFYILKSASYGNTLWGNSLNDPAQWEFVG +KNKAV
Sbjct  241   GNISPFGGTGTPGNLYSMILNSQTRFYILKSASYGNTLWGNSLNDPAQWEFVGMNKNKAV  300

Query  602   QTVKDRILAGRAKQPVIFHGQLTGNMDVTIPQLPGGRKVILDGSVNLPEGTLSEDSGTLI  661
             QTVKDRILAGRAKQPVIFHGQLTGNMDV+IPQ+PGGRKVI+DGSVNLPEGTLS+DSGTLI
Sbjct  301   QTVKDRILAGRAKQPVIFHGQLTGNMDVAIPQVPGGRKVIFDGSVNLPEGTLSQDSGTLI  360

Query  662   FQGHPVIHASVSGSAPVSLNQKDWENRQFIMKTLSLKDADFHLSRNASLNSDIKSDNSHI  721
             FQGHPVIHAS+SGSAPVSLNQKDWENRQF MKTLSLKDADFHLSRNASLNSDIKSDNSHI
Sbjct  361   FQGHPVIHASISGSAPVSLNQKDWENRQFTMKTLSLKDADFHLSRNASLNSDIKSDNSHI  420

Query  722   TLGSDRVFVDKNDGTGNYVILEEGTSVPDTVNDRSQYEGNITLDHNSTLDIGSRFTGGIE  781
             TLGSDR FVDKNDGTGNYVI EEGTSVPDTVNDRSQYEGNITL+HNS+LDIGSRFTGGI+
Sbjct  421   TLGSDRAFVDKNDGTGNYVIPEEGTSVPDTVNDRSQYEGNITLNHNSALDIGSRFTGGID  480

Query  782   AYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLTALNGLFSDGHIQAGKNSKITLSGTP  841
             AYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLTALNGLFSDGHIQAGKN+KITLSGTP
Sbjct  481   AYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLTALNGLFSDGHIQAGKNGKITLSGTP  540

Query  842   VKDTANQYAPAVYLTDGYDLTGDNATLEITRGAHASGDIHASAASTVTIGSDTPaelasa  901
             VKDTANQYAPAVYLTDGYDLTGDNA+LEITRGAHASGDIHASAASTVTIGSDTPAELASA
Sbjct  541   VKDTANQYAPAVYLTDGYDLTGDNAALEITRGAHASGDIHASAASTVTIGSDTPAELASA  600

Query  902   ettasafaGSLLEGYNAAFNGAITGGRADVSMHNALWTLGGDSAIHTLTVRNSRISSEGD  961
             ET+ASAFAGSLLEGYNAAFNGAITGGRADVSMHNALWTLGGDSAIH+LTVRNSRISSEGD
Sbjct  601   ETAASAFAGSLLEGYNAAFNGAITGGRADVSMHNALWTLGGDSAIHSLTVRNSRISSEGD  660

Query  962   RTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGSDNSLNVSFMKDPAQGQSLNIP  1021
             RTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGSDNSLNVSFM++PAQGQ+LNIP
Sbjct  661   RTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGSDNSLNVSFMNNPAQGQALNIP  720

Query  1022  LVTAPAGTSAEMFKAGTRMIGFSRVTPTLHVDTSGGNTKWILDGFkaeadkaaaakadSF  1081
             LVTAPAGTSAEMFKAGTR+ GFSRVTPTLHVDTSGGNTKWILDGFKAEADKAAAAKADSF
Sbjct  721   LVTAPAGTSAEMFKAGTRVTGFSRVTPTLHVDTSGGNTKWILDGFKAEADKAAAAKADSF  780

Query  1082  MNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMsgagsadggysdNYTHVQVGFDKK  1141
             MNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMSGAGSADGGYSDNYTHVQVGFDKK
Sbjct  781   MNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMSGAGSADGGYSDNYTHVQVGFDKK  840

Query  1142  HELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYASALFESGAYIDLIGKYIHHDN  1201
             HELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYASALFESGAYIDLIGKYIHHDN
Sbjct  841   HELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYASALFESGAYIDLIGKYIHHDN  900

Query  1202  DYTGNFAGLGTKHYNTHSWYAGAETGYRYHLTEETFIEPQAELVYGAVSGKTFRWKDGDM  1261
             DYTGNFA+LGTKHYNTHSWYAGAETGYRYHLTE+TFIEPQAELVYGAVSGKTFRWKDGDM
Sbjct  901   DYTGNFASLGTKHYNTHSWYAGAETGYRYHLTEDTFIEPQAELVYGAVSGKTFRWKDGDM  960

Query  1262  DLSMKNRDFSPLIGRTGIELGKTFSGKDWSVTARAGTSWQFDLLNNGETVLRDASGEKRI  1321
             DLSMKNRDFSPL+GRTG+ELGKTFSGKDWSVTARAGTSWQFDLLNNGETVLRDASGEKRI
Sbjct  961   DLSMKNRDFSPLVGRTGVELGKTFSGKDWSVTARAGTSWQFDLLNNGETVLRDASGEKRI  1020

Query  1322  KGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNVDNAVNANFRYMF  1371
             KGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNVDNAVNANFRYMF
Sbjct  1021  KGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNVDNAVNANFRYMF  1070

14) i14_0334 in NC_017652


> NC_004741_P1|8|G6|30064293|NP_838464.1|Shigella_flexneri_2a_str._2457T|-|15275..18487|pic|S3178|serine 
protease precurser
Length=1070

 Score = 1577 bits (5989),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1035/1070 (97%), Positives = 1061/1070 (99%), Gaps = 1/1070 (0%)

Query  303   MQDDFDAPVDFVSGLPPLNWTYDKTSGTGTLSQGSKNWTMHGQKDNDLNAGKNLVFSGQN  362
             MQDDFDAPVDFVSGL PLNWTYDKTSGTGTLSQGSKNWTMHGQKDNDLNAGKNLVFSGQN
Sbjct  1     MQDDFDAPVDFVSGLGPLNWTYDKTSGTGTLSQGSKNWTMHGQKDNDLNAGKNLVFSGQN  60

Query  363   GAIVLKDSVTQGAGYLEFKDSYTVSAESGKTWTGAGIITDKGTNVTWKVNGVAGDNLHKL  422
             GAI+LKDSVTQGAGYLEFKDSYTVSAESGKTWTGAGIITDKGTNVTWKVNGVAGDNLHKL
Sbjct  61    GAIILKDSVTQGAGYLEFKDSYTVSAESGKTWTGAGIITDKGTNVTWKVNGVAGDNLHKL  120

Query  423   GEGTLTINGTGVNPGGLKTGDGTVVLNQQADTAGNVQAFSSVNLASGRPTVVLGDARQVN  482
             GEGTLTINGTGVNPGGLKTGDG VVLNQQADTAGN+QAFSSVNLASGRPTVVLGDARQVN
Sbjct  121   GEGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGNIQAFSSVNLASGRPTVVLGDARQVN  180

Query  483   PDNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKSRLLLDLKAQDTNVSVP-I  541
             PDNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKS+LLLDLKAQDTNVS P I
Sbjct  181   PDNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKSQLLLDLKAQDTNVSEPTI  240

Query  542   GSISPFGGTGTPGNLYSMILNGQTRFYILKSASYGNTLWGNSLNDPAQWEFVGTDKNKAV  601
             G+ISPFGGTGTPGNLYSMILN+QTRFYILKSASYGNTLWGNSLNDPAQWEFVG +KNKAV
Sbjct  241   GNISPFGGTGTPGNLYSMILNSQTRFYILKSASYGNTLWGNSLNDPAQWEFVGMNKNKAV  300

Query  602   QTVKDRILAGRAKQPVIFHGQLTGNMDVTIPQLPGGRKVILDGSVNLPEGTLSEDSGTLI  661
             QTVKDRILAGRAKQPVIFHGQLTGNMDV+IPQ+PGGRKVI+DGSVNLPEGTLS+DSGTLI
Sbjct  301   QTVKDRILAGRAKQPVIFHGQLTGNMDVAIPQVPGGRKVIFDGSVNLPEGTLSQDSGTLI  360

Query  662   FQGHPVIHASVSGSAPVSLNQKDWENRQFIMKTLSLKDADFHLSRNASLNSDIKSDNSHI  721
             FQGHPVIHAS+SGSAPVSLNQKDWENRQF MKTLSLKDADFHLSRNASLNSDIKSDNSHI
Sbjct  361   FQGHPVIHASISGSAPVSLNQKDWENRQFTMKTLSLKDADFHLSRNASLNSDIKSDNSHI  420

Query  722   TLGSDRVFVDKNDGTGNYVILEEGTSVPDTVNDRSQYEGNITLDHNSTLDIGSRFTGGIE  781
             TLGSDR FVDKNDGTGNYVI EEGTSVPDTVNDRSQYEGNITL+HNS+LDIGSRFTGGI+
Sbjct  421   TLGSDRAFVDKNDGTGNYVIPEEGTSVPDTVNDRSQYEGNITLNHNSALDIGSRFTGGID  480

Query  782   AYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLTALNGLFSDGHIQAGKNSKITLSGTP  841
             AYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLTALNGLFSDGHIQAGKN+KITLSGTP
Sbjct  481   AYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLTALNGLFSDGHIQAGKNGKITLSGTP  540

Query  842   VKDTANQYAPAVYLTDGYDLTGDNATLEITRGAHASGDIHASAASTVTIGSDTPaelasa  901
             VKDTANQYAPAVYLTDGYDLTGDNA+LEITRGAHASGDIHASAASTVTIGSDTPAELASA
Sbjct  541   VKDTANQYAPAVYLTDGYDLTGDNAALEITRGAHASGDIHASAASTVTIGSDTPAELASA  600

Query  902   ettasafaGSLLEGYNAAFNGAITGGRADVSMHNALWTLGGDSAIHTLTVRNSRISSEGD  961
             ET+ASAFAGSLLEGYNAAFNGAITGGRADVSMHNALWTLGGDSAIH+LTVRNSRISSEGD
Sbjct  601   ETAASAFAGSLLEGYNAAFNGAITGGRADVSMHNALWTLGGDSAIHSLTVRNSRISSEGD  660

Query  962   RTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGSDNSLNVSFMKDPAQGQSLNIP  1021
             RTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGSDNSLNVSFM++PAQGQ+LNIP
Sbjct  661   RTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGSDNSLNVSFMNNPAQGQALNIP  720

Query  1022  LVTAPAGTSAEMFKAGTRMIGFSRVTPTLHVDTSGGNTKWILDGFkaeadkaaaakadSF  1081
             LVTAPAGTSAEMFKAGTR+ GFSRVTPTLHVDTSGGNTKWILDGFKAEADKAAAAKADSF
Sbjct  721   LVTAPAGTSAEMFKAGTRVTGFSRVTPTLHVDTSGGNTKWILDGFKAEADKAAAAKADSF  780

Query  1082  MNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMsgagsadggysdNYTHVQVGFDKK  1141
             MNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMSGAGSADGGYSDNYTHVQVGFDKK
Sbjct  781   MNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMSGAGSADGGYSDNYTHVQVGFDKK  840

Query  1142  HELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYASALFESGAYIDLIGKYIHHDN  1201
             HELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYASALFESGAYIDLIGKYIHHDN
Sbjct  841   HELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYASALFESGAYIDLIGKYIHHDN  900

Query  1202  DYTGNFAGLGTKHYNTHSWYAGAETGYRYHLTEETFIEPQAELVYGAVSGKTFRWKDGDM  1261
             DYTGNFA+LGTKHYNTHSWYAGAETGYRYHLTE+TFIEPQAELVYGAVSGKTFRWKDGDM
Sbjct  901   DYTGNFASLGTKHYNTHSWYAGAETGYRYHLTEDTFIEPQAELVYGAVSGKTFRWKDGDM  960

Query  1262  DLSMKNRDFSPLIGRTGIELGKTFSGKDWSVTARAGTSWQFDLLNNGETVLRDASGEKRI  1321
             DLSMKNRDFSPL+GRTG+ELGKTFSGKDWSVTARAGTSWQFDLLNNGETVLRDASGEKRI
Sbjct  961   DLSMKNRDFSPLVGRTGVELGKTFSGKDWSVTARAGTSWQFDLLNNGETVLRDASGEKRI  1020

Query  1322  KGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNVDNAVNANFRYMF  1371
             KGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNVDNAVNANFRYMF
Sbjct  1021  KGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNVDNAVNANFRYMF  1070

15) i02_0334 in NC_017651


> NC_004741_P1|8|G6|30064293|NP_838464.1|Shigella_flexneri_2a_str._2457T|-|15275..18487|pic|S3178|serine 
protease precurser
Length=1070

 Score = 1577 bits (5989),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1035/1070 (97%), Positives = 1061/1070 (99%), Gaps = 1/1070 (0%)

Query  303   MQDDFDAPVDFVSGLPPLNWTYDKTSGTGTLSQGSKNWTMHGQKDNDLNAGKNLVFSGQN  362
             MQDDFDAPVDFVSGL PLNWTYDKTSGTGTLSQGSKNWTMHGQKDNDLNAGKNLVFSGQN
Sbjct  1     MQDDFDAPVDFVSGLGPLNWTYDKTSGTGTLSQGSKNWTMHGQKDNDLNAGKNLVFSGQN  60

Query  363   GAIVLKDSVTQGAGYLEFKDSYTVSAESGKTWTGAGIITDKGTNVTWKVNGVAGDNLHKL  422
             GAI+LKDSVTQGAGYLEFKDSYTVSAESGKTWTGAGIITDKGTNVTWKVNGVAGDNLHKL
Sbjct  61    GAIILKDSVTQGAGYLEFKDSYTVSAESGKTWTGAGIITDKGTNVTWKVNGVAGDNLHKL  120

Query  423   GEGTLTINGTGVNPGGLKTGDGTVVLNQQADTAGNVQAFSSVNLASGRPTVVLGDARQVN  482
             GEGTLTINGTGVNPGGLKTGDG VVLNQQADTAGN+QAFSSVNLASGRPTVVLGDARQVN
Sbjct  121   GEGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGNIQAFSSVNLASGRPTVVLGDARQVN  180

Query  483   PDNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKSRLLLDLKAQDTNVSVP-I  541
             PDNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKS+LLLDLKAQDTNVS P I
Sbjct  181   PDNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKSQLLLDLKAQDTNVSEPTI  240

Query  542   GSISPFGGTGTPGNLYSMILNGQTRFYILKSASYGNTLWGNSLNDPAQWEFVGTDKNKAV  601
             G+ISPFGGTGTPGNLYSMILN+QTRFYILKSASYGNTLWGNSLNDPAQWEFVG +KNKAV
Sbjct  241   GNISPFGGTGTPGNLYSMILNSQTRFYILKSASYGNTLWGNSLNDPAQWEFVGMNKNKAV  300

Query  602   QTVKDRILAGRAKQPVIFHGQLTGNMDVTIPQLPGGRKVILDGSVNLPEGTLSEDSGTLI  661
             QTVKDRILAGRAKQPVIFHGQLTGNMDV+IPQ+PGGRKVI+DGSVNLPEGTLS+DSGTLI
Sbjct  301   QTVKDRILAGRAKQPVIFHGQLTGNMDVAIPQVPGGRKVIFDGSVNLPEGTLSQDSGTLI  360

Query  662   FQGHPVIHASVSGSAPVSLNQKDWENRQFIMKTLSLKDADFHLSRNASLNSDIKSDNSHI  721
             FQGHPVIHAS+SGSAPVSLNQKDWENRQF MKTLSLKDADFHLSRNASLNSDIKSDNSHI
Sbjct  361   FQGHPVIHASISGSAPVSLNQKDWENRQFTMKTLSLKDADFHLSRNASLNSDIKSDNSHI  420

Query  722   TLGSDRVFVDKNDGTGNYVILEEGTSVPDTVNDRSQYEGNITLDHNSTLDIGSRFTGGIE  781
             TLGSDR FVDKNDGTGNYVI EEGTSVPDTVNDRSQYEGNITL+HNS+LDIGSRFTGGI+
Sbjct  421   TLGSDRAFVDKNDGTGNYVIPEEGTSVPDTVNDRSQYEGNITLNHNSALDIGSRFTGGID  480

Query  782   AYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLTALNGLFSDGHIQAGKNSKITLSGTP  841
             AYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLTALNGLFSDGHIQAGKN+KITLSGTP
Sbjct  481   AYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLTALNGLFSDGHIQAGKNGKITLSGTP  540

Query  842   VKDTANQYAPAVYLTDGYDLTGDNATLEITRGAHASGDIHASAASTVTIGSDTPaelasa  901
             VKDTANQYAPAVYLTDGYDLTGDNA+LEITRGAHASGDIHASAASTVTIGSDTPAELASA
Sbjct  541   VKDTANQYAPAVYLTDGYDLTGDNAALEITRGAHASGDIHASAASTVTIGSDTPAELASA  600

Query  902   ettasafaGSLLEGYNAAFNGAITGGRADVSMHNALWTLGGDSAIHTLTVRNSRISSEGD  961
             ET+ASAFAGSLLEGYNAAFNGAITGGRADVSMHNALWTLGGDSAIH+LTVRNSRISSEGD
Sbjct  601   ETAASAFAGSLLEGYNAAFNGAITGGRADVSMHNALWTLGGDSAIHSLTVRNSRISSEGD  660

Query  962   RTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGSDNSLNVSFMKDPAQGQSLNIP  1021
             RTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGSDNSLNVSFM++PAQGQ+LNIP
Sbjct  661   RTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGSDNSLNVSFMNNPAQGQALNIP  720

Query  1022  LVTAPAGTSAEMFKAGTRMIGFSRVTPTLHVDTSGGNTKWILDGFkaeadkaaaakadSF  1081
             LVTAPAGTSAEMFKAGTR+ GFSRVTPTLHVDTSGGNTKWILDGFKAEADKAAAAKADSF
Sbjct  721   LVTAPAGTSAEMFKAGTRVTGFSRVTPTLHVDTSGGNTKWILDGFKAEADKAAAAKADSF  780

Query  1082  MNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMsgagsadggysdNYTHVQVGFDKK  1141
             MNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMSGAGSADGGYSDNYTHVQVGFDKK
Sbjct  781   MNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMSGAGSADGGYSDNYTHVQVGFDKK  840

Query  1142  HELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYASALFESGAYIDLIGKYIHHDN  1201
             HELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYASALFESGAYIDLIGKYIHHDN
Sbjct  841   HELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYASALFESGAYIDLIGKYIHHDN  900

Query  1202  DYTGNFAGLGTKHYNTHSWYAGAETGYRYHLTEETFIEPQAELVYGAVSGKTFRWKDGDM  1261
             DYTGNFA+LGTKHYNTHSWYAGAETGYRYHLTE+TFIEPQAELVYGAVSGKTFRWKDGDM
Sbjct  901   DYTGNFASLGTKHYNTHSWYAGAETGYRYHLTEDTFIEPQAELVYGAVSGKTFRWKDGDM  960

Query  1262  DLSMKNRDFSPLIGRTGIELGKTFSGKDWSVTARAGTSWQFDLLNNGETVLRDASGEKRI  1321
             DLSMKNRDFSPL+GRTG+ELGKTFSGKDWSVTARAGTSWQFDLLNNGETVLRDASGEKRI
Sbjct  961   DLSMKNRDFSPLVGRTGVELGKTFSGKDWSVTARAGTSWQFDLLNNGETVLRDASGEKRI  1020

Query  1322  KGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNVDNAVNANFRYMF  1371
             KGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNVDNAVNANFRYMF
Sbjct  1021  KGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNVDNAVNANFRYMF  1070

16) O3M_04570 in NC_018650


> NC_004741_P1|8|G6|30064293|NP_838464.1|Shigella_flexneri_2a_str._2457T|-|15275..18487|pic|S3178|serine 
protease precurser
Length=1070

 Score = 1401 bits (5319),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 943/943 (100%), Positives = 943/943 (100%), Gaps = 0/943 (0%)

Query  303   MQDDFDAPVDFVSGLGPLNWTYDKTSGTGTLSQGSKNWTMHGQKDNDLNAGKNLVFSGQN  362
             MQDDFDAPVDFVSGLGPLNWTYDKTSGTGTLSQGSKNWTMHGQKDNDLNAGKNLVFSGQN
Sbjct  1     MQDDFDAPVDFVSGLGPLNWTYDKTSGTGTLSQGSKNWTMHGQKDNDLNAGKNLVFSGQN  60

Query  363   GAIILKDSVTQGAGYLEFKDSYTVSAESGKTWTGAGIITDKGTNVTWKVNGVAGDNLHKL  422
             GAIILKDSVTQGAGYLEFKDSYTVSAESGKTWTGAGIITDKGTNVTWKVNGVAGDNLHKL
Sbjct  61    GAIILKDSVTQGAGYLEFKDSYTVSAESGKTWTGAGIITDKGTNVTWKVNGVAGDNLHKL  120

Query  423   GEGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGNIQAFSSVNLASGRPTVVLGDARQVN  482
             GEGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGNIQAFSSVNLASGRPTVVLGDARQVN
Sbjct  121   GEGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGNIQAFSSVNLASGRPTVVLGDARQVN  180

Query  483   PDNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKSQLLLDLKAQDTNVSEPTI  542
             PDNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKSQLLLDLKAQDTNVSEPTI
Sbjct  181   PDNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKSQLLLDLKAQDTNVSEPTI  240

Query  543   GNISPFGGTGTPGNLYSMILNSQTRFYILKSASYGNTLWGNSLNDPAQWEFVGMNKNKAV  602
             GNISPFGGTGTPGNLYSMILNSQTRFYILKSASYGNTLWGNSLNDPAQWEFVGMNKNKAV
Sbjct  241   GNISPFGGTGTPGNLYSMILNSQTRFYILKSASYGNTLWGNSLNDPAQWEFVGMNKNKAV  300

Query  603   QTVKDRILAGRAKQPVIFHGQLTGNMDVAIPQVPGGRKVIFDGSVNLPEGTLSQDSGTLI  662
             QTVKDRILAGRAKQPVIFHGQLTGNMDVAIPQVPGGRKVIFDGSVNLPEGTLSQDSGTLI
Sbjct  301   QTVKDRILAGRAKQPVIFHGQLTGNMDVAIPQVPGGRKVIFDGSVNLPEGTLSQDSGTLI  360

Query  663   FQGHPVIHASISGSAPVSLNQKDWENRQFTMKTLSLKDADFHLSRNASLNSDIKSDNSHI  722
             FQGHPVIHASISGSAPVSLNQKDWENRQFTMKTLSLKDADFHLSRNASLNSDIKSDNSHI
Sbjct  361   FQGHPVIHASISGSAPVSLNQKDWENRQFTMKTLSLKDADFHLSRNASLNSDIKSDNSHI  420

Query  723   TLGSDRAFVDKNDGTGNYVIPEEGTSVPDTVNDRSQYEGNITLNHNSALDIGSRFTGGID  782
             TLGSDRAFVDKNDGTGNYVIPEEGTSVPDTVNDRSQYEGNITLNHNSALDIGSRFTGGID
Sbjct  421   TLGSDRAFVDKNDGTGNYVIPEEGTSVPDTVNDRSQYEGNITLNHNSALDIGSRFTGGID  480

Query  783   AYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLTALNGLFSDGHIQAGKNGKITLSGTP  842
             AYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLTALNGLFSDGHIQAGKNGKITLSGTP
Sbjct  481   AYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLTALNGLFSDGHIQAGKNGKITLSGTP  540

Query  843   VKDTANQYAPAVYLTDGYDLTGDNAALEITRGAHASGDIHASAASTVTIGSDTPaelasa  902
             VKDTANQYAPAVYLTDGYDLTGDNAALEITRGAHASGDIHASAASTVTIGSDTPAELASA
Sbjct  541   VKDTANQYAPAVYLTDGYDLTGDNAALEITRGAHASGDIHASAASTVTIGSDTPAELASA  600

Query  903   etaasafaGSLLEGYNAAFNGAITGGRADVSMHNALWTLGGDSAIHSLTVRNSRISSEGD  962
             ETAASAFAGSLLEGYNAAFNGAITGGRADVSMHNALWTLGGDSAIHSLTVRNSRISSEGD
Sbjct  601   ETAASAFAGSLLEGYNAAFNGAITGGRADVSMHNALWTLGGDSAIHSLTVRNSRISSEGD  660

Query  963   RTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGSDNSLNVSFMNNPAQGQALNIP  1022
             RTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGSDNSLNVSFMNNPAQGQALNIP
Sbjct  661   RTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGSDNSLNVSFMNNPAQGQALNIP  720

Query  1023  LVTAPAGTSAEMFKAGTRVTGFSRVTPTLHVDTSGGNTKWILDGFkaeadkaaaakadSF  1082
             LVTAPAGTSAEMFKAGTRVTGFSRVTPTLHVDTSGGNTKWILDGFKAEADKAAAAKADSF
Sbjct  721   LVTAPAGTSAEMFKAGTRVTGFSRVTPTLHVDTSGGNTKWILDGFKAEADKAAAAKADSF  780

Query  1083  MNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMsgagsadggysdNYTHVQVGFDKK  1142
             MNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMSGAGSADGGYSDNYTHVQVGFDKK
Sbjct  781   MNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMSGAGSADGGYSDNYTHVQVGFDKK  840

Query  1143  HELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYASALFESGAYIDLIGKYIHHDN  1202
             HELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYASALFESGAYIDLIGKYIHHDN
Sbjct  841   HELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYASALFESGAYIDLIGKYIHHDN  900

Query  1203  DYTGNFASLGTKHYNTHSWYAGAETGYRYHLTEDTFIEPQAEL  1245
             DYTGNFASLGTKHYNTHSWYAGAETGYRYHLTEDTFIEPQAEL
Sbjct  901   DYTGNFASLGTKHYNTHSWYAGAETGYRYHLTEDTFIEPQAEL  943

17) ROD_p1411 in NC_013717


> NC_004741_P1|8|G6|30064293|NP_838464.1|Shigella_flexneri_2a_str._2457T|-|15275..18487|pic|S3178|serine 
protease precurser
Length=1070

 Score = 1376 bits (5222),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 845/1071 (79%), Positives = 972/1071 (91%), Gaps = 7/1071 (0%)

Query  303   MEEDFDAPVAAVSGKEPLAWNFDKNtgtgtlsqgtttWDMHGQKGKDLNAGKNLVFSGQN  362
             M++DFDAPV  VSG  PL W +DK +GTGTLSQG+  W MHGQK++DLNAGKNLVFSGQN
Sbjct  1     MQDDFDAPVDFVSGLGPLNWTYDKTSGTGTLSQGSKNWTMHGQKDNDLNAGKNLVFSGQN  60

Query  363   GAILLKDSVTQGAGYLEFKDSYTVSADSGKTWTGAGIITDKGTDVTWKVNGVAGDNLHKL  422
             GAI+LKDSVTQGAGYLEFKDSYTVSA+SGKTWTGAGIITDKGT+VTWKVNGVAGDNLHKL
Sbjct  61    GAIILKDSVTQGAGYLEFKDSYTVSAESGKTWTGAGIITDKGTNVTWKVNGVAGDNLHKL  120

Query  423   GEGTLTVNGSGVNPGGLKTGDGTVILAQKPDAAGNVQAFSSVNLASGRPTVVLTDSKQVN  482
             GEGTLT+NG+GVNPGGLKTGDG V+L Q++D+AGN+QAFSSVNLASGRPTVVL D++QVN
Sbjct  121   GEGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGNIQAFSSVNLASGRPTVVLGDARQVN  180

Query  483   PDNISWGYRGGVLDLNGNDITFTRLRVSDYGAVIANKAANKSHLSLNLSAANNEDVSVPI  542
             PDNISWGYRGG LDLNGN +TFTRL+ +DYGAVI+N+A +KS+L L+L A + +     I
Sbjct  181   PDNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKSQLLLDLKAQDTNVSEPTI  240

Query  543   GTVNPFGGKGTPGSLYSRNLNGQTSYYILKSASYGNTLWGNSLNNPAEWEFVGHDKNKAV  602
             G ++PFGG GTPG+LYS  LN+QT +YILKSASYGNTLWGNSLN+PA+WEFVG +KNKAV
Sbjct  241   GNISPFGGTGTPGNLYSMILNSQTRFYILKSASYGNTLWGNSLNDPAQWEFVGMNKNKAV  300

Query  603   QTVKDRVLAERAKQPVIYHGQLNGNMDVTIPQLPGERKVVMDGSVNLPGGNLSKEGGSLI  662
             QTVKDR+LA RAKQPVI+HGQL GNMDV+IPQ+PG RKV+ DGSVNLP G LS+++G+LI
Sbjct  301   QTVKDRILAGRAKQPVIFHGQLTGNMDVAIPQVPGGRKVIFDGSVNLPEGTLSQDSGTLI  360

Query  663   FQGHPVIHASVNGSAPVSLTQKDWETRQFTLKTLSLKNADFHLSRNAVLNGDIQADNSHI  722
             FQGHPVIHAS++GSAPVSL QKDWE RQFT+KTLSLK+ADFHLSRNA LN+DI++DNSHI
Sbjct  361   FQGHPVIHASISGSAPVSLNQKDWENRQFTMKTLSLKDADFHLSRNASLNSDIKSDNSHI  420

Query  723   ALGSGKVFVDKNDSTGNYVIPEEGSSSPVE----SQYLGNVSLQKGSTLDINSRFTGGIE  778
             +LGS++ FVDKND+TGNYVIPEEG+S P      SQY GN++L+  S+LDI SRFTGGI+
Sbjct  421   TLGSDRAFVDKNDGTGNYVIPEEGTSVPDTVNDRSQYEGNITLNHNSALDIGSRFTGGID  480

Query  779   AHDSQVNVTSPDALLQNSGVFVNSSLSVRDGGHLTAQKGLYSDGRVQIGKNGTLSLSGTP  838
             A DS V++TSPD LL  +G F  SSL+V+DGGHLTA +GL+SDG++Q GKNG ++LSGTP
Sbjct  481   AYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLTALNGLFSDGHIQAGKNGKITLSGTP  540

Query  839   EAGADNTWMPVLTYMTEGYDLTGDNATLDISQQAHVSGDIHATSPSTIRIGSENPGSVAS  898
               ++ N   P + Y+T+GYDLTGDNA+L+I++ AH SGDIHA+++ST+ IGS+ P+ +AS
Sbjct  541   VKDTANQYAPAV-YLTDGYDLTGDNAALEITRGAHASGDIHASAASTVTIGSDTPAELAS  599

Query  899   --SVTPVLAAGLYSGYNAAYYGAITGGKGNVSMNNGLWQLTGDSGINNLTARNSRVQSEE  956
               + ++ +A++L  GYNAA+ GAITGG+++VSM+N+LW L GDS+I++LT RNSR+ SE 
Sbjct  600   AETAASAFAGSLLEGYNAAFNGAITGGRADVSMHNALWTLGGDSAIHSLTVRNSRISSEG  659

Query  957   KGAFRTLTVNSLDATGSDFVLRTDLKNADKISVTGKASGSDNTLNVSFMKNPVPGQSLNI  1016
               +FRTLTVN LDATGSDFVLRTDLKNADKI+VT KA+GSDN+LNVSFM+NP  GQ+LNI
Sbjct  660   DRTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGSDNSLNVSFMNNPAQGQALNI  719

Query  1017  PLVSAPAGTAENVFKAGTRVTGFSRVTPTLHVDTSGGSTKWILDGFRaeadkaaaakadS  1076
             PLV+APAGT+ ++FKAGTRVTGFSRVTPTLHVDTSGG+TKWILDGF+AEADKAAAAKADS
Sbjct  720   PLVTAPAGTSAEMFKAGTRVTGFSRVTPTLHVDTSGGNTKWILDGFKAEADKAAAAKADS  779

Query  1077  FMNAGYKNFMTEVNNLNKRMGELRDTKGDAGAWARIMNGAGSADGGYSDNYTHVQVGFDK  1136
             FMNAGYKNFMTEVNNLNKRMG+LRDT+GDAGAWARIM+GAGSADGGYSDNYTHVQVGFDK
Sbjct  780   FMNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMSGAGSADGGYSDNYTHVQVGFDK  839

Query  1137  KHALDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYASALFNSGAYIDLIGKYIHHD  1196
             KH LDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYASALF+SGAYIDLIGKYIHHD
Sbjct  840   KHELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYASALFESGAYIDLIGKYIHHD  899

Query  1197  NDYTGNFAGLGTKHYGTHSWYAGAETGYRYHLTEDTFIEPQAELVYGAVSGKTFRWKDGD  1256
             NDYTGNFA+LGTKHY THSWYAGAETGYRYHLTEDTFIEPQAELVYGAVSGKTFRWKDGD
Sbjct  900   NDYTGNFASLGTKHYNTHSWYAGAETGYRYHLTEDTFIEPQAELVYGAVSGKTFRWKDGD  959

Query  1257  MDLSMKNKDFSPLIGRTGVELGKTFSGKDWSVTARAGTSWQFDLLNNGETVLRDASGEKR  1316
             MDLSMKN+DFSPL+GRTGVELGKTFSGKDWSVTARAGTSWQFDLLNNGETVLRDASGEKR
Sbjct  960   MDLSMKNRDFSPLVGRTGVELGKTFSGKDWSVTARAGTSWQFDLLNNGETVLRDASGEKR  1019

Query  1317  IKGEKDSRMLFNVGMNAQIKDNIRVGLEFEKSAFGKYNVDNAINANFRYMF  1367
             IKGEKDSRMLFNVGMNAQIKDN+R GLEFEKSAFGKYNVDNA+NANFRYMF
Sbjct  1020  IKGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNVDNAVNANFRYMF  1070

18) sepA in NC_017319


> NC_004741_P1|8|G6|30064293|NP_838464.1|Shigella_flexneri_2a_str._2457T|-|15275..18487|pic|S3178|serine 
protease precurser
Length=1070

 Score = 1020 bits (3865),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 613/1071 (58%), Positives = 848/1071 (80%), Gaps = 18/1071 (1%)

Query  310   QNDFDKTIAYTSGEGVLQWKYDAAngtgtltqgnttWDMHGKKGNDLNAGKNLLFTGNNG  369
             Q+DFD  + + SG G L+W YD ++GTGTL+QG+  W MHG+K+NDLNAGKNL+F+G+NG
Sbjct  2     QDDFDAPVDFVSGLGPLNWTYDKTSGTGTLSQGSKNWTMHGQKDNDLNAGKNLVFSGQNG  61

Query  370   EVVLQNSVNQGAGYLQFAGDYRVSALNGQTWMGGGIITDKGTHVLWQVNGVAGDNLHKTG  429
              ++L++SV QGAGYL+F + Y VSA +G+TW G+GIITDKGT+V W+VNGVAGDNLHK G
Sbjct  62    AIILKDSVTQGAGYLEFKDSYTVSAESGKTWTGAGIITDKGTNVTWKVNGVAGDNLHKLG  121

Query  430   EGTLTVNGTGVNAGGLKVGDGTVILNQQADADGKVQAFSSVGIASGRPTVVLSDSQQVNP  489
             EGTLT+NGTGVN+GGLK GDG V+LNQQAD+ G++QAFSSV +ASGRPTVVL+D++QVNP
Sbjct  122   EGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGNIQAFSSVNLASGRPTVVLGDARQVNP  181

Query  490   DNISWGYRGGRLELNGNNLTFTRLQAADYGAIITNNSEKKSTVTLDLQTLKASDINVPVN  549
             DNISWGYRGG+L+LNGN +TFTRLQAADYGA+ITNN+++KS + LDL++  ++  +  + 
Sbjct  182   DNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKSQLLLDLKAQDTNVSEPTIG  241

Query  550   TVSIFGGRGAPGDLY--YDSSTKQYFILKASSYSPFF--SDLNNSSVWQNVGKDRNKAID  605
              +S FGG G+PG+LY    +S  +++ILK++SY+  +  + LN+++ W+ VG ++NKA++
Sbjct  242   NISPFGGTGTPGNLYSMILNSQTRFYILKSASYGNTLWGNSLNDPAQWEFVGMNKNKAVQ  301

Query  606   TVKQQKIEA-SSQPYMYHGQLNGNMDVNIPQLSGKDVLALDGSVNLPEGSITKKSGTLIF  664
             TVK++ + + + QP ++HGQL GNMDV IPQ++G   + +DGSVNLPEG++++ SGTLIF
Sbjct  302   TVKDRILAGRAKQPVIFHGQLTGNMDVAIPQVPGGRKVIFDGSVNLPEGTLSQDSGTLIF  361

Query  665   QGHPVIHAGTTTSSS----QSDWETRQFTLEKLKLDAATFHLSRNGKMQGDINATNGSTV  720
             QGHPVIHA+ + S++    Q DWE RQFT+  L L  A FHLSRN+ +++DI+ ++ S +
Sbjct  362   QGHPVIHASISGSAPVSLNQKDWENRQFTMKTLSLKDADFHLSRNASLNSDIK-SDNSHI  420

Query  721   ILGSSRVFTDRSDGTGNAVSSVEGSATATTVGDQSDYSGNVTLENKSSLQIMERFTGGIE  780
              LGS R F D++DGTGN V + EG++ + TV D+S+Y GN+TL+++S+L+I  RFTGGI+
Sbjct  421   TLGSDRAFVDKNDGTGNYVIPEEGTSVPDTVNDRSQYEGNITLNHNSALDIGSRFTGGID  480

Query  781   AYDSTVSVTSQNAVFDRVGSFVNSSLTLGKGAKLTAQSGIFSTGAVDVKENASLTLTGMP  840
             AYDS+VS+TS + ++   G+F  SSLT+  G+ LTA +G+FS G ++   N+ +TL+G P
Sbjct  481   AYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLTALNGLFSDGHIQAGKNGKITLSGTP  540

Query  841   SAQKQGYYSPVISTTEGINL-EDNASFSVKNMGYLSSDIHAGTTAATINLGD---SDADA  896
               +    Y+P +  T+G +L  DNA++ +   +  S+DIHA ++A+T+ +G    ++  +
Sbjct  541   VKDTANQYAPAVYLTDGYDLTGDNAALEITRGAHASGDIHA-SAASTVTIGSDTPAELAS  599

Query  897   GKTDSPLFS-SLMKGYNAVLRGSITGAQSTVNMINALWYSDGKSEAGALKAKGSRIELGD  955
             + T ++ F+ SL+ GYNA + G+ITG+++ V+M NALW  +G S   +L  + SRI   +
Sbjct  600   AETAASAFAGSLLEGYNAAFNGAITGGRADVSMHNALWTLGGDSAIHSLTVRNSRISSEG  659

Query  956   GKHFATLQVKELSADNTTFLMHTNNSRADQLNVTDKLSGSNNSVLVDFLNKPAS--EMSV  1013
             ++ F TL V+ L A  + F+++T+   AD++NVT+K +GS+NS+ V F+N+PA    +++
Sbjct  660   DRTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGSDNSLNVSFMNNPAQGQALNI  719

Query  1014  TLITAPKGSDEKTFTAGTQQIGFSNVTPVISTEKTDDATKWVLTGYQTTADAGASKAAKD  1073
              L+TAP G+    F AGT+  GFS VTP +  + +++ TKW+L G+++ AD +A+  A  
Sbjct  720   PLVTAPAGTSAEMFKAGTRVTGFSRVTPTLHVDTSGGNTKWILDGFKAEADKAAAAKADS  779

Query  1074  FMASGYKSFLTEVNNLNKRMGDLRDTQGDAGVWARIMNGTGSADGDYSDNYTHVQIGVDR  1133
             FM +GYK+F+TEVNNLNKRMGDLRDT+GDAG WARIM+G+GSADG+YSDNYTHVQ+G D+
Sbjct  780   FMNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMSGAGSADGGYSDNYTHVQVGFDK  839

Query  1134  KHELDGVDLFTGALLTYTDSNASSHAFSGKNKSVGGGLYASALFNSGAYFDLIGKYLHHD  1193
             KHELDGVDLFTG  +TYTDS+A SHAFSGK KSVGGGLYASALF+SGAY+DLIGKY+HHD
Sbjct  840   KHELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYASALFESGAYIDLIGKYIHHD  899

Query  1194  NQHTANFASLGTKDYSSHSWYAGAEVGYRYHLTKESWVEPQIELVYGSVSGKAFSWEDRG  1253
             N+ T+NFASLGTK+Y++HSWYAGAE GYRYHLT ++ +EPQ ELVYG+VSGK+F W D +
Sbjct  900   NDYTGNFASLGTKHYNTHSWYAGAETGYRYHLTEDTFIEPQAELVYGAVSGKTFRWKDGD  959

Query  1254  MALSMKDKDYNPLIGRTGVDVGRAFSGDDWKITARAGLGYQFDLLANGETVLQDASGEKR  1313
             M LSMK++D++PL+GRTGV++G++FSG DW +TARAG + QFDLL NGETVL+DASGEKR
Sbjct  960   MDLSMKNRDFSPLVGRTGVELGKTFSGKDWSVTARAGTSWQFDLLNNGETVLRDASGEKR  1019

Query  1314  FEGEKDSRMLMTVGMNAEIKDNMRLGLELEKSAFGKYNVDNAINANFRYVF  1364
             + GEKDSRML  VGMNA+IKDNMR+GLE+EKSAFGKYNVDNA+NANFRY+F
Sbjct  1020  IKGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNVDNAVNANFRYMF  1070

19) sepA in NC_004851


> NC_004741_P1|8|G6|30064293|NP_838464.1|Shigella_flexneri_2a_str._2457T|-|15275..18487|pic|S3178|serine 
protease precurser
Length=1070

 Score = 1019 bits (3864),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 613/1071 (58%), Positives = 849/1071 (80%), Gaps = 18/1071 (1%)

Query  310   QNDFDKTIAYTSGEGVLQWKYDAAngtgtltqgnttWDMHGKKGNDLNAGKNLLFTGNNG  369
             Q+DFD  + + SG G L+W YD ++GTGTL+QG+  W MHG+K+NDLNAGKNL+F+G+NG
Sbjct  2     QDDFDAPVDFVSGLGPLNWTYDKTSGTGTLSQGSKNWTMHGQKDNDLNAGKNLVFSGQNG  61

Query  370   EVVLQNSVNQGAGYLQFAGDYRVSALNGQTWMGGGIITDKGTHVLWQVNGVAGDNLHKTG  429
              ++L++SV QGAGYL+F + Y VSA +G+TW G+GIITDKGT+V W+VNGVAGDNLHK G
Sbjct  62    AIILKDSVTQGAGYLEFKDSYTVSAESGKTWTGAGIITDKGTNVTWKVNGVAGDNLHKLG  121

Query  430   EGTLTVNGTGVNAGGLKVGDGTVILNQQADADGKVQAFSSVGIASGRPTVVLSDSQQVNP  489
             EGTLT+NGTGVN+GGLK GDG V+LNQQAD+ G++QAFSSV +ASGRPTVVL+D++QVNP
Sbjct  122   EGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGNIQAFSSVNLASGRPTVVLGDARQVNP  181

Query  490   DNISWGYRGGRLELNGNNLTFTRLQAADYGAIITNNSEKKSTVTLDLQTLKASDINVPVN  549
             DNISWGYRGG+L+LNGN +TFTRLQAADYGA+ITNN+++KS + LDL++  ++  +  + 
Sbjct  182   DNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKSQLLLDLKAQDTNVSEPTIG  241

Query  550   TVSIFGGRGAPGDLY--YDSSTKQYFILKASSYSPFF--SDLNNSSVWQNVGKDRNKAID  605
              +S FGG G+PG+LY    +S  +++ILK++SY+  +  + LN+++ W+ VG ++NKA++
Sbjct  242   NISPFGGTGTPGNLYSMILNSQTRFYILKSASYGNTLWGNSLNDPAQWEFVGMNKNKAVQ  301

Query  606   TVKQQKIEA-SSQPYMYHGQLNGNMDVNIPQLSGKDVLALDGSVNLPEGSITKKSGTLIF  664
             TVK++ + + + QP ++HGQL GNMDV IPQ++G   + +DGSVNLPEG++++ SGTLIF
Sbjct  302   TVKDRILAGRAKQPVIFHGQLTGNMDVAIPQVPGGRKVIFDGSVNLPEGTLSQDSGTLIF  361

Query  665   QGHPVIHAGTTTSSS----QSDWETRQFTLEKLKLDAATFHLSRNGKMQGDINATNGSTV  720
             QGHPVIHA+ + S++    Q DWE RQFT+  L L  A FHLSRN+ +++DI+ ++ S +
Sbjct  362   QGHPVIHASISGSAPVSLNQKDWENRQFTMKTLSLKDADFHLSRNASLNSDIK-SDNSHI  420

Query  721   ILGSSRVFTDRSDGTGNAVFSVEGSATATTVGDQSDYSGNVTLENKSSLQIMERFTGGIE  780
              LGS R F D++DGTGN V++ EG++ + TV D+S+Y GN+TL+++S+L+I  RFTGGI+
Sbjct  421   TLGSDRAFVDKNDGTGNYVIPEEGTSVPDTVNDRSQYEGNITLNHNSALDIGSRFTGGID  480

Query  781   AYDSTVSVTSQNAVFDRVGSFVNSSLTLGKGAKLTAQSGIFSTGAVDVKENASLTLTGMP  840
             AYDS+VS+TS + ++   G+F  SSLT+  G+ LTA +G+FS G ++   N+ +TL+G P
Sbjct  481   AYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLTALNGLFSDGHIQAGKNGKITLSGTP  540

Query  841   SAQKQGYYSPVISTTEGINL-EDNASFSVKNMGYLSSDIHAGTTAATINLGD---SDADA  896
               +    Y+P +  T+G +L  DNA++ +   +  S+DIHA ++A+T+ +G    ++  +
Sbjct  541   VKDTANQYAPAVYLTDGYDLTGDNAALEITRGAHASGDIHA-SAASTVTIGSDTPAELAS  599

Query  897   GKTDSPLFS-SLMKGYNAVLRGSITGAQSTVNMINALWYSDGKSEAGALKAKGSRIELGD  955
             + T ++ F+ SL+ GYNA + G+ITG+++ V+M NALW  +G S   +L  + SRI   +
Sbjct  600   AETAASAFAGSLLEGYNAAFNGAITGGRADVSMHNALWTLGGDSAIHSLTVRNSRISSEG  659

Query  956   GKHFATLQVKELSADNTTFLMHTNNSRADQLNVTDKLSGSNNSVLVDFLNKPAS--EMSV  1013
             ++ F TL V+ L A  + F+++T+   AD++NVT+K +GS+NS+ V F+N+PA    +++
Sbjct  660   DRTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGSDNSLNVSFMNNPAQGQALNI  719

Query  1014  TLITAPKGSDEKTFTAGTQQIGFSNVTPVISTEKTDDATKWVLTGYQTTADAGASKAAKD  1073
              L+TAP G+    F AGT+  GFS VTP +  + +++ TKW+L G+++ AD +A+  A  
Sbjct  720   PLVTAPAGTSAEMFKAGTRVTGFSRVTPTLHVDTSGGNTKWILDGFKAEADKAAAAKADS  779

Query  1074  FMASGYKSFLTEVNNLNKRMGDLRDTQGDAGVWARIMNGTGSADGDYSDNYTHVQIGVDR  1133
             FM +GYK+F+TEVNNLNKRMGDLRDT+GDAG WARIM+G+GSADG+YSDNYTHVQ+G D+
Sbjct  780   FMNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMSGAGSADGGYSDNYTHVQVGFDK  839

Query  1134  KHELDGVDLFTGALLTYTDSNASSHAFSGKNKSVGGGLYASALFNSGAYFDLIGKYLHHD  1193
             KHELDGVDLFTG  +TYTDS+A SHAFSGK KSVGGGLYASALF+SGAY+DLIGKY+HHD
Sbjct  840   KHELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYASALFESGAYIDLIGKYIHHD  899

Query  1194  NQHTANFASLGTKDYSSHSWYAGAEVGYRYHLTKESWVEPQIELVYGSVSGKAFSWEDRG  1253
             N+ T+NFASLGTK+Y++HSWYAGAE GYRYHLT ++ +EPQ ELVYG+VSGK+F W D +
Sbjct  900   NDYTGNFASLGTKHYNTHSWYAGAETGYRYHLTEDTFIEPQAELVYGAVSGKTFRWKDGD  959

Query  1254  MALSMKDKDYNPLIGRTGVDVGRAFSGDDWKITARAGLGYQFDLLANGETVLQDASGEKR  1313
             M LSMK++D++PL+GRTGV++G++FSG DW +TARAG + QFDLL NGETVL+DASGEKR
Sbjct  960   MDLSMKNRDFSPLVGRTGVELGKTFSGKDWSVTARAGTSWQFDLLNNGETVLRDASGEKR  1019

Query  1314  FEGEKDSRMLMTVGMNAEIKDNMRLGLELEKSAFGKYNVDNAINANFRYVF  1364
             + GEKDSRML  VGMNA+IKDNMR+GLE+EKSAFGKYNVDNA+NANFRY+F
Sbjct  1020  IKGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNVDNAVNANFRYMF  1070

20) O3M_26437 in NC_018654


> NC_004741_P1|8|G6|30064293|NP_838464.1|Shigella_flexneri_2a_str._2457T|-|15275..18487|pic|S3178|serine 
protease precurser
Length=1070

 Score = 1016 bits (3849),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 613/1071 (58%), Positives = 848/1071 (80%), Gaps = 18/1071 (1%)

Query  310   QNDFDKTIAYTSGEGVLQWKYDAAngtgtltqgnttWDMHGKKGNDLNAGKNLLFTGNNG  369
             Q+DFD  + + SG G L+W YD ++GTGTL+QG+  W MHG+K+NDLNAGKNL+F+G+NG
Sbjct  2     QDDFDAPVDFVSGLGPLNWTYDKTSGTGTLSQGSKNWTMHGQKDNDLNAGKNLVFSGQNG  61

Query  370   EVVLQNSVNQGAGYLQFAGDYRVSALNGQTWMGGGIITDKGTHVLWQVNGVAGDNLHKTG  429
              ++L++SV QGAGYL+F + Y VSA +G+TW G+GIITDKGT+V W+VNGVAGDNLHK G
Sbjct  62    AIILKDSVTQGAGYLEFKDSYTVSAESGKTWTGAGIITDKGTNVTWKVNGVAGDNLHKLG  121

Query  430   EGTLTVNGTGVNAGGLKVGDGTVILNQQADADGKVQAFSSVGIASGRPTVVLSDSQQVNP  489
             EGTLT+NGTGVN+GGLK GDG V+LNQQAD+ G++QAFSSV +ASGRPTVVL+D++QVNP
Sbjct  122   EGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGNIQAFSSVNLASGRPTVVLGDARQVNP  181

Query  490   DNISWGYRGGRLELNGNNLTFTRLQAADYGAIITNNSEKKSTVTLDLQTLKASDINVPVN  549
             DNISWGYRGG+L+LNGN +TFTRLQAADYGA+ITNN+++KS + LDL++  ++  +  + 
Sbjct  182   DNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKSQLLLDLKAQDTNVSEPTIG  241

Query  550   TVSIFGGRGAPGDLY--YDSSTKQYFILKASSYSPFF--SDLNNSSVWQNVGKDRNKAID  605
              +S FGG G+PG+LY    +S  +++ILK++SY+  +  + LN+++ W+ VG ++NKA++
Sbjct  242   NISPFGGTGTPGNLYSMILNSQTRFYILKSASYGNTLWGNSLNDPAQWEFVGMNKNKAVQ  301

Query  606   TVKQQKIEA-SSQPYMYHGQLNGNMDVNIPQLSGKDVLALDGSVNLPEGSITKKSGTLIF  664
             TVK++ + + + QP ++HGQL GNMDV IPQ++G   + +DGSVNLPEG++++ SGTLIF
Sbjct  302   TVKDRILAGRAKQPVIFHGQLTGNMDVAIPQVPGGRKVIFDGSVNLPEGTLSQDSGTLIF  361

Query  665   QGHPVIHAGTTTSSS----QSDWETRQFTLEKLKLDAATFHLSRNGKMQGDINATNGSTV  720
             QGHPVIHA+ + S++    Q DWE RQFT+  L L  A FHLSRN+ +++DI+ ++ S +
Sbjct  362   QGHPVIHASISGSAPVSLNQKDWENRQFTMKTLSLKDADFHLSRNASLNSDIK-SDNSHI  420

Query  721   ILGSSRVFTDRSDGTGNAVSSVEGSATATTVGDQSDYSGNVTLENKSSLQIMERFTGGIE  780
              LGS R F D++DGTGN V + EG++ + TV D+S+Y GN+TL+++S+L+I  RFTGGI+
Sbjct  421   TLGSDRAFVDKNDGTGNYVIPEEGTSVPDTVNDRSQYEGNITLNHNSALDIGSRFTGGID  480

Query  781   AYDSTVSVTSQNAVFDRVGSFVNSSLTLGKGAKLTAQSGIFSTGAVDVKENASLTLTGMP  840
             AYDS+VS+TS + ++   G+F  SSLT+  G+ LTA +G+FS G ++   N+ +TL+G P
Sbjct  481   AYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLTALNGLFSDGHIQAGKNGKITLSGTP  540

Query  841   SAQKQGYYSPVISTTEGINL-EDKASFSVKNMGYLSSDIHAGTTAATINLGD---SDADA  896
               +    Y+P +  T+G +L  D+A++ +   +  S+DIHA ++A+T+ +G    ++  +
Sbjct  541   VKDTANQYAPAVYLTDGYDLTGDNAALEITRGAHASGDIHA-SAASTVTIGSDTPAELAS  599

Query  897   GKTDSPLFS-SLMKGYNAVLRGSITGAQSTVNMINALWYSDGKSEAGALKAKGSRIELGD  955
             + T ++ F+ SL+ GYNA + G+ITG+++ V+M NALW  +G S   +L  + SRI   +
Sbjct  600   AETAASAFAGSLLEGYNAAFNGAITGGRADVSMHNALWTLGGDSAIHSLTVRNSRISSEG  659

Query  956   GKHFATLQVKELSADNTTFLMHTNNSWADQLNVTDKLSGSNNSVLVDFLNKPAS--EMSV  1013
             ++ F TL V+ L A  + F+++T+   AD++NVT+K +GS+NS+ V F+N+PA    +++
Sbjct  660   DRTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGSDNSLNVSFMNNPAQGQALNI  719

Query  1014  TLITAPKGSDEKTFTAGTQQIGFSNVTPVISTEKTNDATKWVLTGYQTTADAGASKAAKD  1073
              L+TAP G+    F AGT+  GFS VTP +  + + + TKW+L G+++ AD +A+  A  
Sbjct  720   PLVTAPAGTSAEMFKAGTRVTGFSRVTPTLHVDTSGGNTKWILDGFKAEADKAAAAKADS  779

Query  1074  FMASGYKSFLTEVNNLNKRMGDLRDTQGDAGVWARIMNGTGSADGDYSDNYTHVQIGVDR  1133
             FM +GYK+F+TEVNNLNKRMGDLRDT+GDAG WARIM+G+GSADG+YSDNYTHVQ+G D+
Sbjct  780   FMNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMSGAGSADGGYSDNYTHVQVGFDK  839

Query  1134  KHELDGVDLFTGALLTYTDSNASSHAFSGKTKSVGGGLYASALFNSGAYFDLIGKYLHHD  1193
             KHELDGVDLFTG  +TYTDS+A SHAFSGKTKSVGGGLYASALF+SGAY+DLIGKY+HHD
Sbjct  840   KHELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYASALFESGAYIDLIGKYIHHD  899

Query  1194  NQHTANFASLGTKDYSSHSWYAGAEVGYRYHLTKESWVEPQIELVYGSVSGKAFSWEDRG  1253
             N+ T+NFASLGTK+Y++HSWYAGAE GYRYHLT ++ +EPQ ELVYG+VSGK+F W D +
Sbjct  900   NDYTGNFASLGTKHYNTHSWYAGAETGYRYHLTEDTFIEPQAELVYGAVSGKTFRWKDGD  959

Query  1254  MALSMKDKDYNPLIGRTGVDVGRAFSGDDWKITARAGLGYQFDLLANGETVLQDASGEKR  1313
             M LSMK++D++PL+GRTGV++G++FSG DW +TARAG + QFDLL NGETVL+DASGEKR
Sbjct  960   MDLSMKNRDFSPLVGRTGVELGKTFSGKDWSVTARAGTSWQFDLLNNGETVLRDASGEKR  1019

Query  1314  FEGEKDSRMLMTVGMNAEIKDNMRLGLELEKSAFGKYNVDNAINANFRYVF  1364
             + GEKDSRML  VGMNA+IKDNMR+GLE+EKSAFGKYNVDNA+NANFRY+F
Sbjct  1020  IKGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNVDNAVNANFRYMF  1070

21) O3K_26432 in NC_018666


> NC_004741_P1|8|G6|30064293|NP_838464.1|Shigella_flexneri_2a_str._2457T|-|15275..18487|pic|S3178|serine 
protease precurser
Length=1070

 Score = 1016 bits (3849),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 613/1071 (58%), Positives = 848/1071 (80%), Gaps = 18/1071 (1%)

Query  310   QNDFDKTIAYTSGEGVLQWKYDAAngtgtltqgnttWDMHGKKGNDLNAGKNLLFTGNNG  369
             Q+DFD  + + SG G L+W YD ++GTGTL+QG+  W MHG+K+NDLNAGKNL+F+G+NG
Sbjct  2     QDDFDAPVDFVSGLGPLNWTYDKTSGTGTLSQGSKNWTMHGQKDNDLNAGKNLVFSGQNG  61

Query  370   EVVLQNSVNQGAGYLQFAGDYRVSALNGQTWMGGGIITDKGTHVLWQVNGVAGDNLHKTG  429
              ++L++SV QGAGYL+F + Y VSA +G+TW G+GIITDKGT+V W+VNGVAGDNLHK G
Sbjct  62    AIILKDSVTQGAGYLEFKDSYTVSAESGKTWTGAGIITDKGTNVTWKVNGVAGDNLHKLG  121

Query  430   EGTLTVNGTGVNAGGLKVGDGTVILNQQADADGKVQAFSSVGIASGRPTVVLSDSQQVNP  489
             EGTLT+NGTGVN+GGLK GDG V+LNQQAD+ G++QAFSSV +ASGRPTVVL+D++QVNP
Sbjct  122   EGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGNIQAFSSVNLASGRPTVVLGDARQVNP  181

Query  490   DNISWGYRGGRLELNGNNLTFTRLQAADYGAIITNNSEKKSTVTLDLQTLKASDINVPVN  549
             DNISWGYRGG+L+LNGN +TFTRLQAADYGA+ITNN+++KS + LDL++  ++  +  + 
Sbjct  182   DNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKSQLLLDLKAQDTNVSEPTIG  241

Query  550   TVSIFGGRGAPGDLY--YDSSTKQYFILKASSYSPFF--SDLNNSSVWQNVGKDRNKAID  605
              +S FGG G+PG+LY    +S  +++ILK++SY+  +  + LN+++ W+ VG ++NKA++
Sbjct  242   NISPFGGTGTPGNLYSMILNSQTRFYILKSASYGNTLWGNSLNDPAQWEFVGMNKNKAVQ  301

Query  606   TVKQQKIEA-SSQPYMYHGQLNGNMDVNIPQLSGKDVLALDGSVNLPEGSITKKSGTLIF  664
             TVK++ + + + QP ++HGQL GNMDV IPQ++G   + +DGSVNLPEG++++ SGTLIF
Sbjct  302   TVKDRILAGRAKQPVIFHGQLTGNMDVAIPQVPGGRKVIFDGSVNLPEGTLSQDSGTLIF  361

Query  665   QGHPVIHAGTTTSSS----QSDWETRQFTLEKLKLDAATFHLSRNGKMQGDINATNGSTV  720
             QGHPVIHA+ + S++    Q DWE RQFT+  L L  A FHLSRN+ +++DI+ ++ S +
Sbjct  362   QGHPVIHASISGSAPVSLNQKDWENRQFTMKTLSLKDADFHLSRNASLNSDIK-SDNSHI  420

Query  721   ILGSSRVFTDRSDGTGNAVSSVEGSATATTVGDQSDYSGNVTLENKSSLQIMERFTGGIE  780
              LGS R F D++DGTGN V + EG++ + TV D+S+Y GN+TL+++S+L+I  RFTGGI+
Sbjct  421   TLGSDRAFVDKNDGTGNYVIPEEGTSVPDTVNDRSQYEGNITLNHNSALDIGSRFTGGID  480

Query  781   AYDSTVSVTSQNAVFDRVGSFVNSSLTLGKGAKLTAQSGIFSTGAVDVKENASLTLTGMP  840
             AYDS+VS+TS + ++   G+F  SSLT+  G+ LTA +G+FS G ++   N+ +TL+G P
Sbjct  481   AYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLTALNGLFSDGHIQAGKNGKITLSGTP  540

Query  841   SAQKQGYYSPVISTTEGINL-EDKASFSVKNMGYLSSDIHAGTTAATINLGD---SDADA  896
               +    Y+P +  T+G +L  D+A++ +   +  S+DIHA ++A+T+ +G    ++  +
Sbjct  541   VKDTANQYAPAVYLTDGYDLTGDNAALEITRGAHASGDIHA-SAASTVTIGSDTPAELAS  599

Query  897   GKTDSPLFS-SLMKGYNAVLRGSITGAQSTVNMINALWYSDGKSEAGALKAKGSRIELGD  955
             + T ++ F+ SL+ GYNA + G+ITG+++ V+M NALW  +G S   +L  + SRI   +
Sbjct  600   AETAASAFAGSLLEGYNAAFNGAITGGRADVSMHNALWTLGGDSAIHSLTVRNSRISSEG  659

Query  956   GKHFATLQVKELSADNTTFLMHTNNSWADQLNVTDKLSGSNNSVLVDFLNKPAS--EMSV  1013
             ++ F TL V+ L A  + F+++T+   AD++NVT+K +GS+NS+ V F+N+PA    +++
Sbjct  660   DRTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGSDNSLNVSFMNNPAQGQALNI  719

Query  1014  TLITAPKGSDEKTFTAGTQQIGFSNVTPVISTEKTNDATKWVLTGYQTTADAGASKAAKD  1073
              L+TAP G+    F AGT+  GFS VTP +  + + + TKW+L G+++ AD +A+  A  
Sbjct  720   PLVTAPAGTSAEMFKAGTRVTGFSRVTPTLHVDTSGGNTKWILDGFKAEADKAAAAKADS  779

Query  1074  FMASGYKSFLTEVNNLNKRMGDLRDTQGDAGVWARIMNGTGSADGDYSDNYTHVQIGVDR  1133
             FM +GYK+F+TEVNNLNKRMGDLRDT+GDAG WARIM+G+GSADG+YSDNYTHVQ+G D+
Sbjct  780   FMNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMSGAGSADGGYSDNYTHVQVGFDK  839

Query  1134  KHELDGVDLFTGALLTYTDSNASSHAFSGKTKSVGGGLYASALFNSGAYFDLIGKYLHHD  1193
             KHELDGVDLFTG  +TYTDS+A SHAFSGKTKSVGGGLYASALF+SGAY+DLIGKY+HHD
Sbjct  840   KHELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYASALFESGAYIDLIGKYIHHD  899

Query  1194  NQHTANFASLGTKDYSSHSWYAGAEVGYRYHLTKESWVEPQIELVYGSVSGKAFSWEDRG  1253
             N+ T+NFASLGTK+Y++HSWYAGAE GYRYHLT ++ +EPQ ELVYG+VSGK+F W D +
Sbjct  900   NDYTGNFASLGTKHYNTHSWYAGAETGYRYHLTEDTFIEPQAELVYGAVSGKTFRWKDGD  959

Query  1254  MALSMKDKDYNPLIGRTGVDVGRAFSGDDWKITARAGLGYQFDLLANGETVLQDASGEKR  1313
             M LSMK++D++PL+GRTGV++G++FSG DW +TARAG + QFDLL NGETVL+DASGEKR
Sbjct  960   MDLSMKNRDFSPLVGRTGVELGKTFSGKDWSVTARAGTSWQFDLLNNGETVLRDASGEKR  1019

Query  1314  FEGEKDSRMLMTVGMNAEIKDNMRLGLELEKSAFGKYNVDNAINANFRYVF  1364
             + GEKDSRML  VGMNA+IKDNMR+GLE+EKSAFGKYNVDNA+NANFRY+F
Sbjct  1020  IKGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNVDNAVNANFRYMF  1070

22) eatA in NC_017724


> NC_004741_P1|8|G6|30064293|NP_838464.1|Shigella_flexneri_2a_str._2457T|-|15275..18487|pic|S3178|serine 
protease precurser
Length=1070

 Score =  941 bits (3564),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 575/1070 (54%), Positives = 813/1070 (76%), Gaps = 16/1070 (1%)

Query  310   KHDFDKTISYDSEKGSLQWRYNKNSGVGTLSQESVVWDMHGKKGGDLNAGKNLQFTGNNG  369
             ++DFD  + + S  G+L+W Y+K SG GTLSQ S  W MHG+K+ DLNAGKNL F+G+NG
Sbjct  2     QDDFDAPVDFVSGLGPLNWTYDKTSGTGTLSQGSKNWTMHGQKDNDLNAGKNLVFSGQNG  61

Query  370   EIILHDSIDQGAGYLQFFDNYTVTSLTDQTWTGGGIITEKGVNVLWQVNGVNDDNLHKVG  429
              IIL DS+ QGAGYL+F D+YTV++ +++TWTG+GIIT+KG NV W+VNGV +DNLHK+G
Sbjct  62    AIILKDSVTQGAGYLEFKDSYTVSAESGKTWTGAGIITDKGTNVTWKVNGVAGDNLHKLG  121

Query  430   EgtltvngkgvnngglkvgDGTVILNQRPDDNGHKQAFSSINISSGRATVILSDANQVNP  489
             EGTLT+NG GVN GGLK GDG V+LNQ++D  G+ QAFSS+N++SGR+TV+L+DA QVNP
Sbjct  122   EGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGNIQAFSSVNLASGRPTVVLGDARQVNP  181

Query  490   DKISWGYRGGTLDLNGNNVNFTRLQAADYGAIVSNNNKNKSELTLKLQTLNENDISVDVK  549
             D+ISWGYRGG LDLNGN V FTRLQAADYGA+++NN ++KS+L L L++ + N     + 
Sbjct  182   DNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKSQLLLDLKAQDTNVSEPTIG  241

Query  550   TYEVFGGHGSPGDLY--YVPASNTYFILKSKAYGPFF--SDLDNTNVWQNVGHDRDKAIQ  605
                 FGG G+PG+LY   + +   ++ILKS +YG  +  + L++   W+ VG +++KA+Q
Sbjct  242   NISPFGGTGTPGNLYSMILNSQTRFYILKSASYGNTLWGNSLNDPAQWEFVGMNKNKAVQ  301

Query  606   IVKQQKI-GESSQPYMFHGQLNGYMDVNIHPLSGKDVLTLDGSVNLPEGVITKKSGTLIF  664
              VK++ + G + QP +FHGQL G MDV I  ++G   + +DGSVNLPEG +++ SGTLIF
Sbjct  302   TVKDRILAGRAKQPVIFHGQLTGNMDVAIPQVPGGRKVIFDGSVNLPEGTLSQDSGTLIF  361

Query  665   QGHPVIHAGMTTSA----GQSDWENRQFTMDKLRLDAATFHLSRNAHMQGDISAANGSTV  720
             QGHPVIHA+++ SA     Q DWENRQFTM  L L  A FHLSRNA +++DI + N S +
Sbjct  362   QGHPVIHASISGSAPVSLNQKDWENRQFTMKTLSLKDADFHLSRNASLNSDIKSDN-SHI  420

Query  721   ILGSSRVFTDKNDGTGNAVSSVEGSSIATTAGDQSYYSGNVLLENHSSLEVRENFTGGIE  780
              LGS R F DKNDGTGN V + EG+S++ T  D+S Y GN+ L+++S+L++   FTGGI+
Sbjct  421   TLGSDRAFVDKNDGTGNYVIPEEGTSVPDTVNDRSQYEGNITLNHNSALDIGSRFTGGID  480

Query  781   AYDSSVSVTSQNAIFDHVGSFVNSSLLLEKGAKLTAQSGIFTNNTMKIKENASLTLTGIP  840
             AYDS+VS+TS + ++   G+F  SSL ++ G+ LTA +G+F++  ++   N+ +TL+G P
Sbjct  481   AYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLTALNGLFSDGHIQAGKNGKITLSGTP  540

Query  841   SVGKPGYYSPVTSTTEGIHL-GERASLSVKNMGYLSSNITAENSAAIINLGDSNATIGKT  899
               + +  Y+P    T+G +L G+ A+L +   +  S++I A  ++++   +D+ A ++ +
Sbjct  541   VKDTANQYAPAVYLTDGYDLTGDNAALEITRGAHASGDIHASAASTVTIGSDTPAELASA  600

Query  900   D---SPLFSTLMRGYNAVLQGNIMGPQSSVNMNNALWHSDRNSELKELKANDSQIELGVR  956
             +   S++ ++L+ GYNA ++G I G ++ V+M+NALW  + +S +  L   +S+I     
Sbjct  601   ETAASAFAGSLLEGYNAAFNGAITGGRADVSMHNALWTLGGDSAIHSLTVRNSRISSEGD  660

Query  957   GHFAKLRVKELIASNSVFLVHANNSQADQLNVTDKLQGSNNTILVDFFNKAANGT--NVT  1014
               F  L V+ L A+ S F+++++  +AD++NVT+K  GS+N++ V F N++A+G   N+ 
Sbjct  661   RTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGSDNSLNVSFMNNPAQGQALNIP  720

Query  1015  LITAPKGSDENTFKAGTQQIGFSNITPEIRTENTDTATQWVLTGYQSVADARASKIATDF  1074
             L+TAP G+  + FKAGT+  GFS +TP ++ + ++  T+W+L G+++ AD  A+  A  F
Sbjct  721   LVTAPAGTSAEMFKAGTRVTGFSRVTPTLHVDTSGGNTKWILDGFKAEADKAAAAKADSF  780

Query  1075  MDSGYKSFLTEVNNLNKRMGDLRDSQGDAGGWARIMNGTGSGESGYRDNYTHVQIGADRK  1134
             M++GYK+F+TEVNNLNKRMGDLRD++GDAG+WARIM+G+GS+++GY DNYTHVQ+G D+K
Sbjct  781   MNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMSGAGSADGGYSDNYTHVQVGFDKK  840

Query  1135  HELNGIDLFTGALLTYTDNNASSQAFSGKTKSLGGGVYASGLFESGAYFDLIGKYLHHDN  1194
             HEL+G+DLFTG  +TYTD++A S+AFSGKTKS+GGG+YAS+LFESGAY+DLIGKY+HHDN
Sbjct  841   HELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYASALFESGAYIDLIGKYIHHDN  900

Query  1195  RYTLNFASLGERSYTSHSLYAGAEIGYRYHMSENTWVEPQMELVYGSVSGKSFNWKDQGM  1254
              YT NFASLG + Y +HS YAGAE GYRYH++E+T +EPQ ELVYG+VSGK+F WKD +M
Sbjct  901   DYTGNFASLGTKHYNTHSWYAGAETGYRYHLTEDTFIEPQAELVYGAVSGKTFRWKDGDM  960

Query  1255  QLSMKDKDYHPLIGRTGVDVGRAFSGDTWKVTVRAGLGYQFDLLANGETVLQDASGKKHF  1314
             +LSMK++D+ PL+GRTGV++G++FSG  W VT RAG + QFDLL NGETVL+DASG K++
Sbjct  961   DLSMKNRDFSPLVGRTGVELGKTFSGKDWSVTARAGTSWQFDLLNNGETVLRDASGEKRI  1020

Query  1315  KGEKDSRMLMNVGTNVEVKDNMRFGLELEKSAFGRYNIDNSINANFRYYF  1364
             KGEKDSRML NVG N ++KDNMRFGLE+EKSAFG+YN+DN++NANFRY F
Sbjct  1021  KGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNVDNAVNANFRYMF  1070

23) SBG_1083 in NC_015761


> NC_004741_P1|8|G6|30064293|NP_838464.1|Shigella_flexneri_2a_str._2457T|-|15275..18487|pic|S3178|serine 
protease precurser
Length=1070

 Score =  928 bits (3515),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 568/1092 (53%), Positives = 804/1092 (74%), Gaps = 35/1092 (3%)

Query  306   IQEDTDAPVTFVAGQGALRWAFDSTDGTGTLTQQETVYQMHGQKDADLNAGKNLVFNGAD  365
             +Q+D DAPV FV+G G+L W++D T GTGTL+Q      MHGQKD DLNAGKNLVF+G +
Sbjct  1     MQDDFDAPVDFVSGLGPLNWTYDKTSGTGTLSQGSKNWTMHGQKDNDLNAGKNLVFSGQN  60

Query  366   GQIVLEDSVNQGAGALTFNGNYTVSTNNGSTWQGAGLDISRDAEVIWQVNGVQGDNLHKI  425
             G I+L DSV QGAG L F+++YTVS+++G TW GAG+   ++++V W+VNGV GDNLHK+
Sbjct  61    GAIILKDSVTQGAGYLEFKDSYTVSAESGKTWTGAGIITDKGTNVTWKVNGVAGDNLHKL  120

Query  426   GEGVLKVNGTGINPGGLKVGDGTVILAQRPDEDGKAQAFSSVNIASGRPTVVLTDSRQVN  485
             GEG L +NGTG+NPGGLK GDG V+L Q++D  G+ QAFSSVN+ASGRPTVVL D+RQVN
Sbjct  121   GEGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGNIQAFSSVNLASGRPTVVLGDARQVN  180

Query  486   PDNISWGFRGGRLDINGNDVTFHKLnaad----nganiinaSDTFATVSIKPITDMTVTI  541
             PDNISWG+RGG+LD+NGN VTF +L+AAD       N  + S+ +  +  +       TI
Sbjct  181   PDNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKSQLLLDLKAQDTNVSEPTI  240

Query  542   NDWDKNKASGGAAGLLYKYNNPYAHTVDYFIQKRKGYG--FYPVNQSDNDSWEYVGHNET  599
              +     ++G ++ L   Y+        ++I K  +YG  +   + +D   WE+VG N  
Sbjct  241   GNISPFGGTGTPGNL---YSMILNSQTRFYILKSASYGNTLWGNSLNDPAQWEFVGMNKN  297

Query  600   QAIEQVKSR----RPVDDRMYHGNLAGNIDLNIDTSRSSGGVIFDGNIDTPEGGLMQSGG  655
             +A++ VK R    R+ +  ++HG+L+GN+D+ I    ++  VIFDG+++ PEG L Q +G
Sbjct  298   KAVQTVKDRILAGRAKQPVIFHGQLTGNMDVAIPQVPGGRKVIFDGSVNLPEGTLSQDSG  357

Query  656   QLTFQGHPVIHAYNNKGVADKLKSLGDDSVRTQPTSFDQPDWEGRTFRLKTLLLKNTDFG  715
              L FQGHPVIHA    ++++           + P S++Q DWE R F +KTL LK++DF 
Sbjct  358   TLIFQGHPVIHA----SISG-----------SAPVSLNQKDWENRQFTMKTLSLKDADFH  402

Query  716   LARNASLNGDIEAVHSSVTLGTPNVYIDLNDGNGTKVTPQKGTSVARQDTDRSRYAGKVT  775
             L+RNASLN+DI + +S +TLG+   ++D NDG G  V P+ GTSV+    DRS+Y G++T
Sbjct  403   LSRNASLNSDIKSDNSHITLGSDRAFVDKNDGTGNYVIPEEGTSVPDTVNDRSQYEGNIT  462

Query  776   LGEQSTLDVREIFTGSIQSQDSAVTVSSRHATLDGYSRFGNTSLALQEGARLTATGGWWS  835
             L ++S+LD+   FTG+I++ DSAV+++S +  L + + F+ +SL++++G++LTA  G  S
Sbjct  463   LNHNSALDIGSRFTGGIDAYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLTALNGLFS  522

Query  836   DSDVIVGPAATLSLAGTSVTGQPGQVSPAFYSTDYGAGYQL-DTGSQLHFSPYTFVTGDI  894
             D+++  G  + ++L+GT+V + + Q +PA Y TD   GY+L +  + L+++  +  +GDI
Sbjct  523   DGHIQAGKNGKITLSGTPVKDTANQYAPAVYLTD---GYDLTGDNAALEITRGAHASGDI  579

Query  895   RAKGDTGISIGGEDGVALADNLPLGEQMMYSLFNGFRNVYSGNVSVPQGRMTMTDTQWQM  954
             +A + + ++IG++    LA     +     SL++G+   ++G ++  ++ ++M ++ W +
Sbjct  580   HASAASTVTIGSDTPAELASAETAASAFAGSLLEGYNAAFNGAITGGRADVSMHNALWTL  639

Query  955   PGDS--HTGALRMIRSLAGFTGRGFNSLTTNTLQANQSAFALRTDLKDSDKIVVNQKAEG  1012
              GDS  H+ ++R  R +++  +R F +LT N L+A  S F LRTDLK++DKI V +KA G
Sbjct  640   GGDSAIHSLTVRNSR-ISSEGDRTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATG  698

Query  1013  RDNTLFVNFLKKPSGQEPLNIPLVSAPAGTNPAMFKAAERVTGFSLVTPTLHTTEQDGKI  1072
              DN+L V+F+++P+  ++LNIPLV+APAGT++ MFKA+ RVTGFS VTPTLH    +G+ 
Sbjct  699   SDNSLNVSFMNNPAQGQALNIPLVTAPAGTSAEMFKAGTRVTGFSRVTPTLHVDTSGGNT  758

Query  1073  QWVLDGFKSAPDKGSATSANSFMGMGYKNFMTEVNNLNKRMGDLRDTQGEDGMWVRIMNG  1132
             +W+LDGFK+ +DK++A+ A+SFM  GYKNFMTEVNNLNKRMGDLRDT+G+ G W RIM+G
Sbjct  759   KWILDGFKAEADKAAAAKADSFMNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMSG  818

Query  1133  AGTGDAGYSDRYTHLQTGFDKKHRLSGADLFTGVLMSYTDSSASGRAYSGDTHSLGGGMY  1192
             AG++D+GYSD YTH+Q GFDKKH L G DLFTGV M+YTDSSA ++A+SG T S+GGG+Y
Sbjct  819   AGSADGGYSDNYTHVQVGFDKKHELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLY  878

Query  1193  ASVMFDSGIYMDVIGKYIHHDNDYNAGFAGLGKRNYGTHSWYAGLEGGYRYRLTESLYIE  1252
             AS +F+SG Y+D+IGKYIHHDNDY + FA+LG ++Y THSWYAG E GYRY+LTE  +IE
Sbjct  879   ASALFESGAYIDLIGKYIHHDNDYTGNFASLGTKHYNTHSWYAGAETGYRYHLTEDTFIE  938

Query  1253  PQAELVYGTVSGTTLKWNDNGMDVSMRSKTYNPLIGRTGVALGKTFSGKDWSVTARTGVD  1312
             PQAELVYG+VSG T++W+D +MD+SM+++ ++PL+GRTGV LGKTFSGKDWSVTAR+G  
Sbjct  939   PQAELVYGAVSGKTFRWKDGDMDLSMKNRDFSPLVGRTGVELGKTFSGKDWSVTARAGTS  998

Query  1313  YQFDLVANGETALRDASGEKRFTGEKDSRMLYNVGLNAQVKDNVRFGLELEQSAFGKYNV  1372
              QFDL+ NGET LRDASGEKR+ GEKDSRML+NVG+NAQ+KDN+RFGLE+E+SAFGKYNV
Sbjct  999   WQFDLLNNGETVLRDASGEKRIKGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNV  1058

Query  1373  DHAINANFRYMF  1384
             D+A+NANFRYMF
Sbjct  1059  DNAVNANFRYMF  1070

24) eatA in NC_009790


> NC_004741_P1|8|G6|30064293|NP_838464.1|Shigella_flexneri_2a_str._2457T|-|15275..18487|pic|S3178|serine 
protease precurser
Length=1070

 Score =  927 bits (3512),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 578/1072 (54%), Positives = 813/1072 (76%), Gaps = 18/1072 (1%)

Query  310   KHDFDKTISYDSKKGSLQWRYDKDAGVGTLSQEGVVWDMHGKKGEDLNAGKNLQFTGNNG  369
             ++DFD  + + S  G+L+W YDK +G GTLSQ +  W MHG+K++DLNAGKNL F+G+NG
Sbjct  2     QDDFDAPVDFVSGLGPLNWTYDKTSGTGTLSQGSKNWTMHGQKDNDLNAGKNLVFSGQNG  61

Query  370   EVILHDSIDQGAGYLQFFNNYTVTSLTDQTWTGGGIITEKGVNVLWQVNGVNNDNLHKVG  429
              +IL DS+ QGAGYL+F ++YTV++ +++TWTG+GIIT+KG NV W+VNGV  DNLHK+G
Sbjct  62    AIILKDSVTQGAGYLEFKDSYTVSAESGKTWTGAGIITDKGTNVTWKVNGVAGDNLHKLG  121

Query  430   EgtltvngkgvnngglkvgDGTVILNQRPDDNGHKQAFSSINISSGRATVILSDANQVNP  489
             EGTLT+NG GVN GGLK GDG V+LNQ++D  G+ QAFSS+N++SGR+TV+L+DA QVNP
Sbjct  122   EGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGNIQAFSSVNLASGRPTVVLGDARQVNP  181

Query  490   DKISWGYRGGTLDLNGNNVTFTRLQAADYGAiisnnnnnknksELTLKLQTLNENDISVD  549
             D+ISWGYRGG LDLNGN VTFTRLQAADYGA+I+NN ++K+  +L L L++ + N     
Sbjct  182   DNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKS--QLLLDLKAQDTNVSEPT  239

Query  550   VKTYEVFGGRGSPGDLY--YVSASNTYFILKSKAYGPFF--SDLDNTNVWQNVGHDRDKA  605
             +     FGG G+PG+LY   +++   ++ILKS +YG  +  + L++   W+ VG +++KA
Sbjct  240   IGNISPFGGTGTPGNLYSMILNSQTRFYILKSASYGNTLWGNSLNDPAQWEFVGMNKNKA  299

Query  606   IQIVKQQKIEE-SSQPYMFHGQLNGYMDVNIHPLSGKDVLTLDGSVNLPEGVITKKSGTL  664
             +Q VK++ +   + QP +FHGQL G MDV I  ++G   + +DGSVNLPEG +++ SGTL
Sbjct  300   VQTVKDRILAGRAKQPVIFHGQLTGNMDVAIPQVPGGRKVIFDGSVNLPEGTLSQDSGTL  359

Query  665   IFQGHPVIHAGMTTSA----GQSDWENRQFTMDKLKLDAATFHLSRNTRMQGDISAANGS  720
             IFQGHPVIHA+++ SA     Q DWENRQFTM  L L  A FHLSRN+ +++DI + N S
Sbjct  360   IFQGHPVIHASISGSAPVSLNQKDWENRQFTMKTLSLKDADFHLSRNASLNSDIKSDN-S  418

Query  721   TVILGSSRVFTDKNDGTGNAVSSVEGSSTATTAADQSYYSGNVLLENHSSLEVRENFTGG  780
              + LGS R F DKNDGTGN V + EG+S + T  D+S Y GN+ L+++S+L++   FTGG
Sbjct  419   HITLGSDRAFVDKNDGTGNYVIPEEGTSVPDTVNDRSQYEGNITLNHNSALDIGSRFTGG  478

Query  781   IEAYDSSVSVTSQNAILDHVGSFINSSLLLEKGAKLTAQSGIFTNNTMEIKENASLTLTG  840
             I+AYDS+VS+TS + +L   G+F  SSL ++ G+ LTA +G+F++  ++   N+ +TL+G
Sbjct  479   IDAYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLTALNGLFSDGHIQAGKNGKITLSG  538

Query  841   IPSVGKPGYYSPVISTTEGIHL-GERASLSVKNMGYLSSNIIAEDSAAIINLGDSNATIG  899
              P  + +  Y+P +  T+G +L G+ A+L +   +  S++I A  ++++   +D+ A ++
Sbjct  539   TPVKDTANQYAPAVYLTDGYDLTGDNAALEITRGAHASGDIHASAASTVTIGSDTPAELA  598

Query  900   KTD---SPLFNTLMRGYNAVLQGNIMGPQSSVNMNNALWHSDRNSEIKELKANDSQIELG  956
              ++   S++  +L+ GYNA ++G I G ++ V+M+NALW  + +S I  L   +S+I   
Sbjct  599   SAETAASAFAGSLLEGYNAAFNGAITGGRADVSMHNALWTLGGDSAIHSLTVRNSRISSE  658

Query  957   GRGHFAKLRVKELIASNSVFLVHVNNGQADQLNVTGKLQGSNNTILVNFFNKAANGT--N  1014
             G   F  L V+ L A+ S F+++ +  +AD++NVT K  GS+N++ V+F N++A+G   N
Sbjct  659   GDRTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGSDNSLNVSFMNNPAQGQALN  718

Query  1015  VTLITAPKGSDENTFKAGTQQIGFSNITPEIRTENTDTATKWVLTGYQSVADARASKIAT  1074
             + L+TAP G+  + FKAGT+  GFS +TP ++ + ++  TKW+L G+++ AD  A+  A 
Sbjct  719   IPLVTAPAGTSAEMFKAGTRVTGFSRVTPTLHVDTSGGNTKWILDGFKAEADKAAAAKAD  778

Query  1075  DFMDSGYKSFLTEVNNLNKRMGDLRDSQGDAGGWARIMNGTGSGESGYRDNYTHVQIGAD  1134
              FM++GYK+F+TEVNNLNKRMGDLRD++GDAG+WARIM+G+GS+++GY DNYTHVQ+G D
Sbjct  779   SFMNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMSGAGSADGGYSDNYTHVQVGFD  838

Query  1135  RKHELNGLNLFTGALLTYTDSNASSQAFSGKTKSLGGGVYASGLFESGAYFDLIGKYLHH  1194
             +KHEL+G++LFTG  +TYTDS+A S+AFSGKTKS+GGG+YAS+LFESGAY+DLIGKY+HH
Sbjct  839   KKHELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYASALFESGAYIDLIGKYIHH  898

Query  1195  DNRYTLNFASLGERSYTTHSLYAGAEIGYRYHMSENTWVEPQMELVYGSVSGKSFNWKDQ  1254
             DN YT NFASLG + Y THS YAGAE GYRYH++E+T +EPQ ELVYG+VSGK+F WKD 
Sbjct  899   DNDYTGNFASLGTKHYNTHSWYAGAETGYRYHLTEDTFIEPQAELVYGAVSGKTFRWKDG  958

Query  1255  GMQLSMKDKDYHPLIGRTGVDVGRVFSGDTWKVTARAGLSYQFDLLANGETVLQDASGKK  1314
             +M+LSMK++D+ PL+GRTGV++G+ FSG  W VTARAG S QFDLL NGETVL+DASG K
Sbjct  959   DMDLSMKNRDFSPLVGRTGVELGKTFSGKDWSVTARAGTSWQFDLLNNGETVLRDASGEK  1018

Query  1315  HFKGEKDSRMLMNVGTNVEVKDNMRFGLELEKSAFGRYNIDNSINANFRYYF  1366
             ++KGEKDSRML NVG N ++KDNMRFGLE+EKSAFG+YN+DN++NANFRY F
Sbjct  1019  RIKGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNVDNAVNANFRYMF  1070

25) A464_1183 in NC_021870


> NC_004741_P1|8|G6|30064293|NP_838464.1|Shigella_flexneri_2a_str._2457T|-|15275..18487|pic|S3178|serine 
protease precurser
Length=1070

 Score =  922 bits (3494),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 566/1092 (52%), Positives = 804/1092 (74%), Gaps = 35/1092 (3%)

Query  306   IQEDTDAPVTFVAGQGALRWAFDSTDGTGTLTQQETVYQMHGQKDADLNAGKNLVFNGAD  365
             +Q+D DAPV FV+G G+L W++D T GTGTL+Q      MHGQKD DLNAGKNLVF+G +
Sbjct  1     MQDDFDAPVDFVSGLGPLNWTYDKTSGTGTLSQGSKNWTMHGQKDNDLNAGKNLVFSGQN  60

Query  366   GQIVLEDSVNQGARALTFNGNYTVSTNNGSTWQGAGLDISRDAEVIWQVNGVQGDNLHKI  425
             G I+L DSV QGA  L F+++YTVS+++G TW GAG+   ++++V W+VNGV GDNLHK+
Sbjct  61    GAIILKDSVTQGAGYLEFKDSYTVSAESGKTWTGAGIITDKGTNVTWKVNGVAGDNLHKL  120

Query  426   GEGVLKVNGTGINPGGLKVGDGTVILAQRPDEDGKAQAFSSVNIASGRPTVVLTDSRQVN  485
             GEG L +NGTG+NPGGLK GDG V+L Q++D  G+ QAFSSVN+ASGRPTVVL D+RQVN
Sbjct  121   GEGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGNIQAFSSVNLASGRPTVVLGDARQVN  180

Query  486   PDNISWGFRGGRLDINGNDVTFHKLnaad----nganiinaSDTFATVSIKPITDMTVTI  541
             PDNISWG+RGG+LD+NGN VTF +L+AAD       N  + S+ +  +  +       TI
Sbjct  181   PDNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKSQLLLDLKAQDTNVSEPTI  240

Query  542   NDWDKNKASGGAAGLLYKYNNPYAHTVDYFIQKRKGYG--FYPVNQSDNDSWEYVGHNET  599
              +     ++G ++ L   Y+        ++I K  +YG  +   + +D   WE+VG N  
Sbjct  241   GNISPFGGTGTPGNL---YSMILNSQTRFYILKSASYGNTLWGNSLNDPAQWEFVGMNKN  297

Query  600   QAIEQVKSR----RPVDDRMYHGNLAGNIDLNIDTSRSSGGVIFDGNIDTPEGGLMQSGG  655
             +A++ VK R    R+ +  ++HG+L+GN+D+ I    ++  VIFDG+++ PEG L Q +G
Sbjct  298   KAVQTVKDRILAGRAKQPVIFHGQLTGNMDVAIPQVPGGRKVIFDGSVNLPEGTLSQDSG  357

Query  656   QLTFQGHPVIHAYNNKGVADKLKSLGDDSVRTQPTSFDQPDWEGRTFRLKTLLLKNTDFG  715
              L FQGHPVIHA    ++++           + P S++Q DWE R F +KTL LK++DF 
Sbjct  358   TLIFQGHPVIHA----SISG-----------SAPVSLNQKDWENRQFTMKTLSLKDADFH  402

Query  716   LARNASLNGDIEAVHSSVTLGTPNVYIDLNDGNGTKVTPQKGTSVAGQDTDMSRYAGKVT  775
             L+RNASLN+DI + +S +TLG+   ++D NDG G  V P+ GTSV++   D S+Y G++T
Sbjct  403   LSRNASLNSDIKSDNSHITLGSDRAFVDKNDGTGNYVIPEEGTSVPDTVNDRSQYEGNIT  462

Query  776   LGEQSTLDVREIFTGSIQSQDSAVTVSSRHATLDDYSRFGNTSLALQEGARLTATGGWWS  835
             L ++S+LD+   FTG+I++ DSAV+++S +  L   + F+ +SL++++G++LTA  G  S
Sbjct  463   LNHNSALDIGSRFTGGIDAYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLTALNGLFS  522

Query  836   DSDVIVGPAATLSLAGTSVTGQPGQVSPAFYSTDYGAGYQLDAG-SQLHFSPYTFVTGDI  894
             D+++  G  + ++L+GT+V + + Q +PA Y TD   GY+L ++ + L+++  +  +GDI
Sbjct  523   DGHIQAGKNGKITLSGTPVKDTANQYAPAVYLTD---GYDLTGDNAALEITRGAHASGDI  579

Query  895   RAKGDTGISIGGEDGVALADNLSLGEQMMYSLFNGFRNVYSGNVSVPQGRMTMTDTQWQM  954
             +A + + ++IG++    LA   + +     SL++G+   ++G ++  ++ ++M ++ W +
Sbjct  580   HASAASTVTIGSDTPAELASAETAASAFAGSLLEGYNAAFNGAITGGRADVSMHNALWTL  639

Query  955   PGDS--HTGALRMIRSLAGFTGRGFNSLTTNTLQANQSAFALRTDLKDSDKIVVNQKAEG  1012
              GDS  H+ ++R  R +++  +R F +LT N L+A  S F LRTDLK++DKI V +KA G
Sbjct  640   GGDSAIHSLTVRNSR-ISSEGDRTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATG  698

Query  1013  RDNTLFVNFLKKPSGQEPLNIPLVSAPAGTNPAMFKAAERVTGFSLVTPTLHTIEQDGKI  1072
              DN+L V+F+++P+  ++LNIPLV+APAGT++ MFKA+ RVTGFS VTPTLH    +G+ 
Sbjct  699   SDNSLNVSFMNNPAQGQALNIPLVTAPAGTSAEMFKAGTRVTGFSRVTPTLHVDTSGGNT  758

Query  1073  QWVLDGFKSAPDKGSATSANSFMGMGYKNFMTEVNNLNKRMGDLRDTQGEDGMWVRIMNG  1132
             +W+LDGFK+ +DK++A+ A+SFM  GYKNFMTEVNNLNKRMGDLRDT+G+ G W RIM+G
Sbjct  759   KWILDGFKAEADKAAAAKADSFMNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMSG  818

Query  1133  AGTGDAGYSDRYTHLQTGFDKKHRLSGADLFTGVLMSYTDSSASGRAYSGDTHSLGGGMY  1192
             AG++D+GYSD YTH+Q GFDKKH L G DLFTGV M+YTDSSA ++A+SG T S+GGG+Y
Sbjct  819   AGSADGGYSDNYTHVQVGFDKKHELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLY  878

Query  1193  ASVMFDSGIYMDVIGKYIHHDNDYNAGFAGLGKRNYGTHSWYAGLEGGYRYRLTESLYIE  1252
             AS +F+SG Y+D+IGKYIHHDNDY + FA+LG ++Y THSWYAG E GYRY+LTE  +IE
Sbjct  879   ASALFESGAYIDLIGKYIHHDNDYTGNFASLGTKHYNTHSWYAGAETGYRYHLTEDTFIE  938

Query  1253  PQAELVYGTVSGTTLKWNDNGMDVSMRSKTYNPLIGRTGVALGKTFSGKDWSVTARTGVD  1312
             PQAELVYG+VSG T++W+D +MD+SM+++ ++PL+GRTGV LGKTFSGKDWSVTAR+G  
Sbjct  939   PQAELVYGAVSGKTFRWKDGDMDLSMKNRDFSPLVGRTGVELGKTFSGKDWSVTARAGTS  998

Query  1313  YQFDLVANGETALRDASGEKRFTGEKDSRMLYNVGLNAQVKDNVRFGLELEQSAFGKYNV  1372
              QFDL+ NGET LRDASGEKR+ GEKDSRML+NVG+NAQ+KDN+RFGLE+E+SAFGKYNV
Sbjct  999   WQFDLLNNGETVLRDASGEKRIKGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNV  1058

Query  1373  DHAINANFRYMF  1384
             D+A+NANFRYMF
Sbjct  1059  DNAVNANFRYMF  1070

26) ECO103_3805 in NC_013353


> NC_004741_P1|8|G6|30064293|NP_838464.1|Shigella_flexneri_2a_str._2457T|-|15275..18487|pic|S3178|serine 
protease precurser
Length=1070

 Score =  896 bits (3395),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 579/1076 (54%), Positives = 814/1076 (76%), Gaps = 19/1076 (1%)

Query  301   LQDDLKPIIVASPEENILRWEFDRSRGTGTLSQGEKIFSMTGSVNGNANTGNNLVFSGNE  360
             +QDD+ + +   +    L W +D++ GTGTLSQG K  +M G  + + N+G+NLVFSG++
Sbjct  1     MQDDFDAPVDFVSGLGPLNWTYDKTSGTGTLSQGSKNWTMHGQKDNDLNAGKNLVFSGQN  60

Query  361   GKIELVSSVEQGAGYLQFDKDYTVLTNNNSTWTGAGIIVGDEANVKWGVNGIAGDNLHKV  420
             G I L  SV QGAGYL+F   YTV +++  TWTGAGII +  +NV W VNG+AGDNLHK+
Sbjct  61    GAIILKDSVTQGAGYLEFKDSYTVSAESGKTWTGAGIITDKGTNVTWKVNGVAGDNLHKL  120

Query  421   GSGTLTVNGHGENkgglkvgdgvvvlEQQPDANQKQQAFSHINIASGRATVKLNGANQVD  480
             G GTLT+NG G N GGLK GDG+VVL+QQ+D+  + QAFS +N+ASGR+TV L +A QV+
Sbjct  121   GEGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGNIQAFSSVNLASGRPTVVLGDARQVN  180

Query  481   ADNISWGYRGGKLDLNGYDFTFSRLQAADYGAEISNDNQTDKSIVTLSLSPLKAEEinvv  540
             +DNISWGYRGGKLDLNG   TF+RLQAADYGA I+N+ Q +KS + L L +  ++  +  
Sbjct  181   PDNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQ-QKSQLLLDLKAQDTNVSEPT  239

Query  541   vnniniMGGTGKPGDLYYTTFDGN--YYLLKSNRYGSALFG-ALNNQSEWQRLGKDKEKA  597
             + NI+  GGTG PG+LY   ++++  +Y+LKS  YG++L G +LN+ ++W+ +G +K+KA
Sbjct  240   IGNISPFGGTGTPGNLYSMILNSQTRFYILKSASYGNTLWGNSLNDPAQWEFVGMNKNKA  299

Query  598   IGLYTQMKMQESAPLSYIYHGKITGNTSVEIPKLAGNDILTLDGSVSIS-GDMSKQDGAL  656
             +    +  +   A  + I+HG++TGN  V IP+++G   + +DGSV+++ G +S++ G+L
Sbjct  300   VQTVKDRILAGRAKQPVIFHGQLTGNMDVAIPQVPGGRKVIFDGSVNLPEGTLSQDSGTL  359

Query  657   IFQGHPVIHAG----QTVSASQSDWENREFSLNNLNLNNVDFSLSRNAFMNGNIRAVNQS  712
             IFQGHPVIHA+      VS +Q DWENR+F+++ L+L++ DF LSRNA +N++I++ ++S
Sbjct  360   IFQGHPVIHASISGSAPVSLNQKDWENRQFTMKTLSLKDADFHLSRNASLNSDIKS-DNS  418

Query  713   TVIIGGDTVFTDKNDGTGNDVISVEGKSAASGT---SSYTGHITLEQKSALDIRDNFRGG  769
              + +G+D  F DKNDGTGN VI+ EG S +      S Y G+ITL+++SALDI   F GG
Sbjct  419   HITLGSDRAFVDKNDGTGNYVIPEEGTSVPDTVNDRSQYEGNITLNHNSALDIGSRFTGG  478

Query  770   VTsedshinvssssvlfsdassFINSSLNIHKGGALTAQGGLFTSGSIDIG-DASLLLTG  828
             + + DS ++++S+ VL++ +++F  SSL +H GG LTA  GLF+ G I+ G ++ + L+G
Sbjct  479   IDAYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLTALNGLFSDGHIQAGKNGKITLSG  538

Query  829   TPVNSDDAAFLPTINMADGGFKLMSDSSVLKARDQASVVGDIISDKQATISFGTESGKEG  888
             TPV+     + P++ ++DG + L +D++ L     A   GDI +   +T+++G+++  E 
Sbjct  539   TPVKDTANQYAPAVYLTDG-YDLTGDNAALEITRGAHASGDIHASAASTVTIGSDTPAEL  597

Query  889   ILSEKASRGLAVGLLSGFNTAYRGAIHAPSASATMNNTWWQLTGDSSLRSLKNTGSMTYF  948
               +E A+ ++A +LL G+N+A+ GAI +  A  +M+N+ W L GDS+++SL    S    
Sbjct  598   ASAETAASAFAGSLLEGYNAAFNGAITGGRADVSMHNALWTLGGDSAIHSLTVRNSRI--  655

Query  949   TGSAANKAFHTLTVDELTTNGTAYAMRTDLKNADKLVVNQKLSGKDNILLVDFLNKPT-G  1007
              +S ++++F+TLTV+ L + G+ + +RTDLKNADK+ V +K +G DN L V F+N+P+ G
Sbjct  656   -SSEGDRTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGSDNSLNVSFMNNPAQG  714

Query  1008  EKLDIELVSAPGNSSKDVFKGSEQEIGFSNVTPVITAIDAGDKTTWNLTGYRMAENPAAT  1067
             + L+I LV+AP+ +S ++FK++ +  GFS VTP +    +G++T W L G++   + AA+
Sbjct  715   QALNIPLVTAPAGTSAEMFKAGTRVTGFSRVTPTLHVDTSGGNTKWILDGFKAEADKAAA  774

Query  1068  QSASGLASVGYKSFLSEVNNLNKRMGDLRDINGEAGAWARIMSGTGSAGGGFSDNHTHVQ  1127
               A ++ + GYK+F++EVNNLNKRMGDLRD NG+AGAWARIMSG+GSA+GG+SDN THVQ
Sbjct  775   AKADSFMNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMSGAGSADGGYSDNYTHVQ  834

Query  1128  VGVDKKHELDGLDLFTGFTVTHTDSSASADAFKGKTKSVGAGLYASAMFDSGAYIDLIGK  1187
             VG DKKHELDG+DLFTG T+T TDSSA ++AF GKTKSVG+GLYASA+F+SGAYIDLIGK
Sbjct  835   VGFDKKHELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYASALFESGAYIDLIGK  894

Query  1188  YVHHDNEYTATFAGLGTRDYSTHSWYAGAEAGYRCHVTEDTWIEPQAELVYGAVSGKQFA  1247
             Y+HHDN+YT+ FA+LGT++Y+THSWYAGAE+GYR H+TEDT IEPQAELVYGAVSGK F 
Sbjct  895   YIHHDNDYTGNFASLGTKHYNTHSWYAGAETGYRYHLTEDTFIEPQAELVYGAVSGKTFR  954

Query  1248  WKDQGMHLSMKDRDYNPLIGRTGVDVGKSFSGKDWKVTARAGLGYQFDLLANGETVLRDA  1307
             WKD +M+LSMK+RD++PL+GRTGV++GK+FSGKDW VTARAG + QFDLL NGETVLRDA
Sbjct  955   WKDGDMDLSMKNRDFSPLVGRTGVELGKTFSGKDWSVTARAGTSWQFDLLNNGETVLRDA  1014

Query  1308  SGEKRIKGEKDSRMLMSVGLNAEIRDNVRFGLEFEKSAFGKYNVDNAVNANFRYSF  1363
             SGEKRIKGEKDSRML +VG+NA+I+DN+RFGLEFEKSAFGKYNVDNAVNANFRY F
Sbjct  1015  SGEKRIKGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNVDNAVNANFRYMF  1070

27) ECSF_4014 in NC_013654


> NC_004741_P1|8|G6|30064293|NP_838464.1|Shigella_flexneri_2a_str._2457T|-|15275..18487|pic|S3178|serine 
protease precurser
Length=1070

 Score =  889 bits (3369),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 607/1036 (59%), Positives = 783/1036 (76%), Gaps = 74/1036 (7%)

Query  334   NKNKDLKFHG-GGSIELTDNLNSGTGGLIFDEGQHYSVIGKD-KAYKGAGVEIGKDTVVD  391
             N  K+L F G  G+I L D++  G+G L F ++  Y+V +   K+  GAG+  +K+T V 
Sbjct  49    NAGKNLVFSGQNGAIILKDSVTQGAGYLEFKDS--YTVSAESGKTWTGAGIITDKGTNVT  106

Query  392   WSVKGEANDNLHKTGAGTLNVNVA--QGNNLKTGDGTVFLNAE-------KAFNAIYVAS  442
             W V+G A DNLHK G GTL +N +  +   LKTGDG V LN +       +AF+++ +AS
Sbjct  107   WKVNGVAGDNLHKLGEGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGNIQAFSSVNLAS  166

Query  443   GRGTVKLGQADALDKNSDYRGIYFTSRGGTLDLNGFSQSFKKIAATDVGTIITNTSDKTA  502
             GR TV LG+A  ++ ++  +G Y   RGG LDLNG + +F ++ A+D G++ITN +++ +
Sbjct  167   GRPTVVLGDARQVNPDNISWG-Y---RGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKS  222

Query  503   T--LSLQNPSRYVYHGSITGNTNIEHTGTQKSADSSLIIDGN------------------  542
                L L+     V + +I   + +  TGT  +   S+I++++                  
Sbjct  223   QLLLDLKAQDTNVSEPTIGNISPFGGTGTPGNL-YSMILNSQTRFYILKSASYGNTLWGN  281

Query  543   ----------INTRNDITVRNSQLR-LQGHATSHAIFRE---GPRHCYVPGV--------  580
                       +   ++ +V+  + R L G+A    IF+    G  +  +P V        
Sbjct  282   SLNDPAQWEFVGMNKNKAVQTVKDRILAGRAKQPVIFHGQLTGNMDVAIPQVPGGRKVIF  341

Query  581   -----LCDKDYVTDFARLESEANKKNNSAYKTNNQVASFDQPDWETRHFRFKTLNLENSE  635
                  L +     D + L  +++   +++   +  V S++Q DWE R+F  KTL+L +++
Sbjct  342   DGSVNLPEGTLSQDSGTLIFQGHPVIHASISGSAPV-SLNQKDWENRQFTMKTLSLKDAD  400

Query  636   FTTARNSVVEGDIVASNSTLKLGGDVPVFIDMYDGINITGNGFGFRQDVREGRSADDGSS  695
             F  +RN+ +++DI + NS + LG+D   F+D  DG       + + ++      + ++ S
Sbjct  401   FHLSRNASLNSDIKSDNSHITLGSD-RAFVDKNDGTG----NYVIPEEGTSVPDTVNDRS  455

Query  696   SYTGKITLQKGSTLDINNRFIGGIEAHDSKVNVTSPDALLQNSGVFVNSTLSVRDGGHLT  755
              Y G+ITL+  S+LDI +RF GGI+A DS V++TSPD LL  +G F  S+L+V+DGGHLT
Sbjct  456   QYEGNITLNHNSALDIGSRFTGGIDAYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLT  515

Query  756   AQKGLYSDGRVQIGKNGTLSLSGTPENGADNTWMPVLTYMTEGYDLTGDNATLNISQQAH  815
             A +GL+SDG++Q GKNG ++LSGTP +++ N   P + Y+T+GYDLTGDNA+L+I++ AH
Sbjct  516   ALNGLFSDGHIQAGKNGKITLSGTPVKDTANQYAPAV-YLTDGYDLTGDNAALEITRGAH  574

Query  816   VSGDVHATSSSSIRIGSENpgsvsssvspvla--aglFSGYNAAYYGAITGGKGNVSMNN  873
              SGD+HA+++S++ IGS+ P+ ++S+ ++  A  ++L+ GYNAA+ GAITGG+++VSM+N
Sbjct  575   ASGDIHASAASTVTIGSDTPAELASAETAASAFAGSLLEGYNAAFNGAITGGRADVSMHN  634

Query  874   GLWQLTGDSDINSLTTRNSRVQSEENGAFRTLTVKTLDATGSDFVLRTDLKDADKISITE  933
             +LW L GDS I+SLT RNSR+ SE + +FRTLTV+ LDATGSDFVLRTDLK+ADKI++TE
Sbjct  635   ALWTLGGDSAIHSLTVRNSRISSEGDRTFRTLTVNKLDATGSDFVLRTDLKNADKINVTE  694

Query  934   KASGSDNTLNVSFMKNPSPGQSLNIPLVSAPAGTSGDIFKAGTRVTGFSRVTPTLRVDTT  993
             KA+GSDN+LNVSFM+NP+ GQ+LNIPLV+APAGTS+++FKAGTRVTGFSRVTPTL+VDT+
Sbjct  695   KATGSDNSLNVSFMNNPAQGQALNIPLVTAPAGTSAEMFKAGTRVTGFSRVTPTLHVDTS  754

Query  994   GGSTKWILDGFRTEadkaaaakaNSFMNAGYKSFMTEVNNLNKRMGELRDTNGDAGAWAR  1053
             GG+TKWILDGF++EADKAAAAKA+SFMNAGYK+FMTEVNNLNKRMG+LRDTNGDAGAWAR
Sbjct  755   GGNTKWILDGFKAEADKAAAAKADSFMNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWAR  814

Query  1054  IMNGAGSADGGYSDNYTHVQVGFDKKHALDGVDLFTGVTMTYTDSSADSDAFSGKTKSVG  1113
             IM+GAGSADGGYSDNYTHVQVGFDKKH LDGVDLFTGVTMTYTDSSADS+AFSGKTKSVG
Sbjct  815   IMSGAGSADGGYSDNYTHVQVGFDKKHELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVG  874

Query  1114  GGLYASALFNSGAYIDLIGKYIHHDNDYTGNFAGLGTKHYGTHSWYAGAETGYRYHLTED  1173
             GGLYASALF+SGAYIDLIGKYIHHDNDYTGNFA+LGTKHY THSWYAGAETGYRYHLTED
Sbjct  875   GGLYASALFESGAYIDLIGKYIHHDNDYTGNFASLGTKHYNTHSWYAGAETGYRYHLTED  934

Query  1174  TFIEPQAELVYGAVSGKTFRWKDGEMDLSMKNKDFSPLIGRTGIELGKTFRGKDWSVTAR  1233
             TFIEPQAELVYGAVSGKTFRWKDG+MDLSMKN+DFSPL+GRTG+ELGKTF GKDWSVTAR
Sbjct  935   TFIEPQAELVYGAVSGKTFRWKDGDMDLSMKNRDFSPLVGRTGVELGKTFSGKDWSVTAR  994

Query  1234  AGTSWQFDLLNNGETVLRDASGEKRIKGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFG  1293
             AGTSWQFDLLNNGETVLRDASGEKRIKGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFG
Sbjct  995   AGTSWQFDLLNNGETVLRDASGEKRIKGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFG  1054

Query  1294  KYNVDNAINANFRYMF  1309
             KYNVDNA+NANFRYMF
Sbjct  1055  KYNVDNAVNANFRYMF  1070

28) SARI_01743 in NC_010067


> NC_004741_P1|8|G6|30064293|NP_838464.1|Shigella_flexneri_2a_str._2457T|-|15275..18487|pic|S3178|serine 
protease precurser
Length=1070

 Score =  887 bits (3358),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 559/1089 (52%), Positives = 799/1089 (74%), Gaps = 29/1089 (2%)

Query  306   IQDDTDALVTFMADQGPLRWAFNSTDGTGTLIQQETVYQMHGQKGTDLNEGKNLVFNGAD  365
             +QDD DA V F+++ GPL W+++ T GTGTL Q      MHGQK+ DLN GKNLVF+G +
Sbjct  1     MQDDFDAPVDFVSGLGPLNWTYDKTSGTGTLSQGSKNWTMHGQKDNDLNAGKNLVFSGQN  60

Query  366   GQIALEDAVNQGAGALAFNGNYTVFTTNGSTWRGAGLDITQDAEVSWQVNGVQGDNLHKI  425
             G I L D+V QGAG L F+++YTV + +G TW GAG+   ++++V+W+VNGV GDNLHK+
Sbjct  61    GAIILKDSVTQGAGYLEFKDSYTVSAESGKTWTGAGIITDKGTNVTWKVNGVAGDNLHKL  120

Query  426   GEGVLKVNGTGINPGGLKVGDGTVILAQRPDEDGKVQAFSSVNIASGRPTVILTDSRQVN  485
             GEG L +NGTG+NPGGLK GDG V+L Q++D  G++QAFSSVN+ASGRPTV+L D+RQVN
Sbjct  121   GEGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGNIQAFSSVNLASGRPTVVLGDARQVN  180

Query  486   SDNISWGFRGGRLDINGNDVTFHKinaadnganiinTSDTFATV--SIKPLTDMTVTIND  543
             +DNISWG+RGG+LD+NGN VTF +++AAD GA I N ++  + +   +K+  D  V+   
Sbjct  181   PDNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKSQLLLDLKA-QDTNVSEPT  239

Query  544   WDKNKPSGGAAGLLYKYNNIYTHTVDYFIQKRKGYG--YYPVNQSDNDSWEYVGHNEMQA  601
              ++  P GG++     Y+ I      ++I K  +YG      + +D   WE+VG N  +A
Sbjct  240   IGNISPFGGTGTPGNLYSMILNSQTRFYILKSASYGNTLWGNSLNDPAQWEFVGMNKNKA  299

Query  602   IERVKSR----RPIDDRIYHGNIVGNIHLNIDTSHSNGGVIFDGNIDTPDGELMQSGGQL  657
             ++ VK R    R+ +  I+HG++ GN+++ I    +   VIFDG+++ P+G L Q +G L
Sbjct  300   VQTVKDRILAGRAKQPVIFHGQLTGNMDVAIPQVPGGRKVIFDGSVNLPEGTLSQDSGTL  359

Query  658   TFQGHPVIHAYNGKWLTDKLKSLGDDSVRNQPTSFDQPDWENRTFHLKTLVLKNTYFGLA  717
              FQGHPVIHA           S+++ +    P S++Q DWENR F +KTL LK++ F L+
Sbjct  360   IFQGHPVIHA-----------SISGSA----PVSLNQKDWENRQFTMKTLSLKDADFHLS  404

Query  718   RNASLNGNIEAVHSSVTLGTPNLYIDLNDGNGTKVTPQKGISVAGQESDMSRYAGKVTLS  777
             RNASLN++I + +S +TLG+   ++D NDG G  V P+ G SV++  +D S+Y G++TL+
Sbjct  405   RNASLNSDIKSDNSHITLGSDRAFVDKNDGTGNYVIPEEGTSVPDTVNDRSQYEGNITLN  464

Query  778   EQSTLDVREIFTGSIQSQDSDVTVSSRHAKLDDYSRFGNTSLTLQEGARLTATGGWWSDS  837
             ++S+LD+   FTG+I++ DS V+++S +  L   + F+ +SLT+++G++LTA  G  SD+
Sbjct  465   HNSALDIGSRFTGGIDAYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLTALNGLFSDG  524

Query  838   DVIVGPAATLSLTGTPAASLPGQMSPAFYSTNYGAGYQL-GAASELQFSPYTFVTgdira  896
             ++  G  + ++L+GTP    + Q +PA Y T+   GY+L G  + L+++  +  +GDI+A
Sbjct  525   HIQAGKNGKITLSGTPVKDTANQYAPAVYLTD---GYDLTGDNAALEITRGAHASGDIHA  581

Query  897   agdariaigSSDNVVLADNLPLEEQMMYGLFNGFRNVYSGNVSAPQGRMAMTDTQWQMPG  956
             ++ + ++IGS     LA           +L++G+   ++G +++ ++ ++M ++ W + G
Sbjct  582   SAASTVTIGSDTPAELASAETAASAFAGSLLEGYNAAFNGAITGGRADVSMHNALWTLGG  641

Query  957   DSRIGALRMTRS-LAGFTGRGFHTLATDTLQANQSAFALRTDLKDSDKIVVNQNAEGRDN  1015
             DS I +L +  S +++  +R F+TL+ + L+A  S F LRTDLK++DKI V ++A G DN
Sbjct  642   DSAIHSLTVRNSRISSEGDRTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGSDN  701

Query  1016  TLFVNFLKKPSGKESLNIPLVSAPAGTSPTMFKAAERVTGFSLVTPTLHTTEQDGKIQWI  1075
             +L V+F+++P+  ++LNIPLV+APAGTS+ MFKA+ RVTGFS VTPTLH    +G+ +WI
Sbjct  702   SLNVSFMNNPAQGQALNIPLVTAPAGTSAEMFKAGTRVTGFSRVTPTLHVDTSGGNTKWI  761

Query  1076  LDGFKTAPDKGTATSANSFMGMGYKNFMTEVNNLTKRMGDLRDTQGEDGMWVRIMNGAGT  1135
             LDGFK+ +DK++A+ A+SFM  GYKNFMTEVNNL KRMGDLRDT+G+ G W RIM+GAG+
Sbjct  762   LDGFKAEADKAAAAKADSFMNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMSGAGS  821

Query  1136  GDAGYSDRYTHLQTGFDKKHRLPGADLFTGVLMSYTDSSASGRAYSGDTHSLGGGLYASV  1195
             +D+GYSD YTH+Q GFDKKH L G DLFTGV M+YTDSSA ++A+SG T S+GGGLYAS 
Sbjct  822   ADGGYSDNYTHVQVGFDKKHELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYASA  881

Query  1196  MFDSGAYMDVIGKYIHHDNDYNAGFAGLGKRNYGTHSWYAGLEGGYRYHLTESLYIEPQA  1255
             +F+SGAY+D+IGKYIHHDNDY + FA+LG ++Y THSWYAG E GYRYHLTE  +IEPQA
Sbjct  882   LFESGAYIDLIGKYIHHDNDYTGNFASLGTKHYNTHSWYAGAETGYRYHLTEDTFIEPQA  941

Query  1256  ELVYGTVSGTTLKWNDNGMDVSMRSKTYNPLIGRTGVALGKTFSGKDWSVTAHTGVDYQF  1315
             ELVYG+VSG T++W+D +MD+SM+++ ++PL+GRTGV LGKTFSGKDWSVTA++G   QF
Sbjct  942   ELVYGAVSGKTFRWKDGDMDLSMKNRDFSPLVGRTGVELGKTFSGKDWSVTARAGTSWQF  1001

Query  1316  DLVTNGEKALRDASGEKRFTGDKDSRMLYNVGLNAQVKDNVRFGLELEQSAFGKYNVDHA  1375
             DL+ NGE  LRDASGEKR+ G+KDSRML+NVG+NAQ+KDN+RFGLE+E+SAFGKYNVD+A
Sbjct  1002  DLLNNGETVLRDASGEKRIKGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNVDNA  1061

Query  1376  INANFRYMF  1384
             +NANFRYMF
Sbjct  1062  VNANFRYMF  1070

29) ROD_p1251 in NC_013717


> NC_004741_P1|8|G6|30064293|NP_838464.1|Shigella_flexneri_2a_str._2457T|-|15275..18487|pic|S3178|serine 
protease precurser
Length=1070

 Score =  882 bits (3341),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 610/1036 (59%), Positives = 785/1036 (76%), Gaps = 74/1036 (7%)

Query  333   NKNKDLSFHG-GGTIELTDNLNSGTGGMIFDGGQHYSVTGKD-KTYKGAGVEIGKGTVVD  390
             N  K+L F G  G+I L D++  G+G + F   + Y+V++   KT  GAG+  +KGT V 
Sbjct  49    NAGKNLVFSGQNGAIILKDSVTQGAGYLEFK--DSYTVSAESGKTWTGAGIITDKGTNVT  106

Query  391   WSVKGVANDNLHKTGAGTLNVNVA--QGNNLKTGDGTVFLNAE-------KAFNAIYVAS  441
             W V+GVA DNLHK G GTL +N +  +   LKTGDG V LN +       +AF+++ +AS
Sbjct  107   WKVNGVAGDNLHKLGEGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGNIQAFSSVNLAS  166

Query  442   GRGTVKLGQVDALDKNSDYRGIYFTSRGGTLDLNGFSQSFKKIAATDVGTIITNTSDKKA  501
             GR TV LG+   ++ ++  +G Y   RGG LDLNG + +F ++ A+D G++ITN +++K+
Sbjct  167   GRPTVVLGDARQVNPDNISWG-Y---RGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKS  222

Query  502   T--LSLQNASRYIYHGNITGNTDIEHAGTQKNADSSLIIDGN------------------  541
                L L+     + +  I   + +  +GT  N   S+I++++                  
Sbjct  223   QLLLDLKAQDTNVSEPTIGNISPFGGTGTPGNL-YSMILNSQTRFYILKSASYGNTLWGN  281

Query  542   ----------IDTHNDITVRNSQLR-LQGHATTHAIFRE---------------GPRFCY  575
                       ++ +++ +V+  + R L G+A    IF+                G +  +
Sbjct  282   SLNDPAQWEFVGMNKNKAVQTVKDRILAGRAKQPVIFHGQLTGNMDVAIPQVPGGRKVIF  341

Query  576   VPGV-LCDKDYVADFARLESEANKKNNSAYKTNNQVASFDQPDWENRHFRFKTLNLENAE  634
               +V L +     D + L  +++   +++   +  V S++Q DWENR+F  KTL+L +A+
Sbjct  342   DGSVNLPEGTLSQDSGTLIFQGHPVIHASISGSAPV-SLNQKDWENRQFTMKTLSLKDAD  400

Query  635   FTTARNSIVEGDIVASDSSLKLGGDVPVFIDKYDGINITGNGFGFRQDVREGRSADDGSS  694
             F  +RN+ +++DI + +S + LG+D   F+DK DG       + + ++      + ++ S
Sbjct  401   FHLSRNASLNSDIKSDNSHITLGSD-RAFVDKNDGTG----NYVIPEEGTSVPDTVNDRS  455

Query  695   SYTGnitlnnnstlninnRFTGGIEAHDSQVNVTSPDALLQNSGVFVNSSLSVHDGGHLT  754
              Y GNITLN+NS+L+I +RFTGGI+A DS V++TSPD LL  +G F  SSL+VHDGGHLT
Sbjct  456   QYEGNITLNHNSALDIGSRFTGGIDAYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLT  515

Query  755   AQKGLYSDGRVQIGKNGTLSLSGTPEAGADNTWMPVLTYMTEGYDLTGDNATLDISQQAH  814
             A +GL+SDG++Q GKNG ++LSGTP  ++ N   P + Y+T+GYDLTGDNA+L+I++ AH
Sbjct  516   ALNGLFSDGHIQAGKNGKITLSGTPVKDTANQYAPAV-YLTDGYDLTGDNAALEITRGAH  574

Query  815   VSGDIHATSPSTIRIGSENPGSVAS--SVTPVLAAGLYSGYNAAYYGAITGGKGNVSMNS  872
              SGDIHA+++ST+ IGS+ P+ +AS  + ++ +A++L  GYNAA+ GAITGG+++VSM++
Sbjct  575   ASGDIHASAASTVTIGSDTPAELASAETAASAFAGSLLEGYNAAFNGAITGGRADVSMHN  634

Query  873   GLWQLTGDSTVNNLTARNSRVQSEEKGAFRTLTVNSLDATGSDFVLRTDLKNADKISVTG  932
             +LW L GDS++++LT RNSR+ SE   +FRTLTVN LDATGSDFVLRTDLKNADKI+VT 
Sbjct  635   ALWTLGGDSAIHSLTVRNSRISSEGDRTFRTLTVNKLDATGSDFVLRTDLKNADKINVTE  694

Query  933   KASGSDNTLNVSFMKNPAPGQSLNIPLVSAPAGTAENVFKAGTRVTGFSRVTPTLHVDTT  992
             KA+GSDN+LNVSFM+NPA GQ+LNIPLV+APAGT+ ++FKAGTRVTGFSRVTPTLHVDT+
Sbjct  695   KATGSDNSLNVSFMNNPAQGQALNIPLVTAPAGTSAEMFKAGTRVTGFSRVTPTLHVDTS  754

Query  993   GGSTKWILDGFRTEadkaaaanadSFMNAGYKNFMTEVNNLNKRMGELRDTNGDAGAWAR  1052
             GG+TKWILDGF++EADKAAAA+ADSFMNAGYKNFMTEVNNLNKRMG+LRDTNGDAGAWAR
Sbjct  755   GGNTKWILDGFKAEADKAAAAKADSFMNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWAR  814

Query  1053  IMNGADSAEGGYSDNYTHVQVGFDKKHALDGVDLFTGVTMTYTDSSADSDAFSGKTKSVG  1112
             IM+GA+SA+GGYSDNYTHVQVGFDKKH LDGVDLFTGVTMTYTDSSADS+AFSGKTKSVG
Sbjct  815   IMSGAGSADGGYSDNYTHVQVGFDKKHELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVG  874

Query  1113  GGLYASALFNSGAYIDLIGKYIHHDNDYTGNFAGLGTKHYGTHSWYAGAETGYRYHLTED  1172
             GGLYASALF+SGAYIDLIGKYIHHDNDYTGNFA+LGTKHY THSWYAGAETGYRYHLTED
Sbjct  875   GGLYASALFESGAYIDLIGKYIHHDNDYTGNFASLGTKHYNTHSWYAGAETGYRYHLTED  934

Query  1173  TFIEPQAELVYGAVSGKTFRWKDGDMDLSMKNKDFSPLIGRTGIELGKTFSGKDWRVTAR  1232
             TFIEPQAELVYGAVSGKTFRWKDGDMDLSMKN+DFSPL+GRTG+ELGKTFSGKDW VTAR
Sbjct  935   TFIEPQAELVYGAVSGKTFRWKDGDMDLSMKNRDFSPLVGRTGVELGKTFSGKDWSVTAR  994

Query  1233  AGTSWQFDLLNNGETVLRDASGEKRIKGEKDGRMLMNVGLNAEIHNNVRFGLEFEKSAFG  1292
             AGTSWQFDLLNNGETVLRDASGEKRIKGEKD+RML NVG+NA+I +N+RFGLEFEKSAFG
Sbjct  995   AGTSWQFDLLNNGETVLRDASGEKRIKGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFG  1054

Query  1293  KYNVDNAINANFRYMF  1308
             KYNVDNA+NANFRYMF
Sbjct  1055  KYNVDNAVNANFRYMF  1070

30) UM146_15930 in NC_017632


> NC_004741_P1|8|G6|30064293|NP_838464.1|Shigella_flexneri_2a_str._2457T|-|15275..18487|pic|S3178|serine 
protease precurser
Length=1070

 Score =  830 bits (3144),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 529/1090 (49%), Positives = 800/1090 (74%), Gaps = 40/1090 (3%)

Query  65    EDNDAPVFFNASSGAPLQWKFDSSTGTGSLKQGSDEYAMHGQKGSDLNAGKNLTFLGHNG  124
             +D DAPV F ++ G PL+W +D ++GTG+L QGS + +MHGQK++DLNAGKNL F G+NG
Sbjct  3     DDFDAPVDFVSGLG-PLNWTYDKTSGTGTLSQGSKNWTMHGQKDNDLNAGKNLVFSGQNG  61

Query  125   QIDLENSVTQGAGSLTFTDDYTVTTSNGSTWTGAGIIVDKDASVNWQVNGVKGDNLHKIG  184
              I L +SVTQGAG L F D YTV++ +G TWTGAGII DK+++V W+VNGV GDNLHK+G
Sbjct  62    AIILKDSVTQGAGYLEFKDSYTVSAESGKTWTGAGIITDKGTNVTWKVNGVAGDNLHKLG  121

Query  185   EGTLVVQGTGVNEGGLKVGDGTVVLNQQADSSGHVQAFSSVNIASGRPTVVLADNQQVNP  244
             EGTL ++GTGVN GGLK GDG VVLNQQAD++G++QAFSSVN+ASGRPTVVL+D +QVNP
Sbjct  122   EGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGNIQAFSSVNLASGRPTVVLGDARQVNP  181

Query  245   DNISWGYRGGVLDVNGNDLTFHKLNAADYGATLGNSSDKTANITLDYQTRPADV---KVN  301
             DNISWGYRGG LD+NGN +TF +L+AADYGA + N++++ +++ LD +++ ++V    + 
Sbjct  182   DNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKSQLLLDLKAQDTNVSEPTIG  241

Query  302   EWSS-SNRGTVGSLYIYNNPYTHTVDYFILKTSSYG---WFPTGQVSNEHWEYVGHDQNS  357
             + S+ +  GT G+LY  +        ++ILK++SYG   W   +     +WE+VG ++N 
Sbjct  242   NISPFGGTGTPGNLY--SMILNSQTRFYILKSASYGNTLW-GNSLNDPAQWEFVGMNKNK  298

Query  358   AQALLANRI----NNKGYLYHGKLLGNINFSNKATPGTTGALVMDGSANMS-GTFTQENG  412
             A   + +RI     ++  ++HG+L GN++ +    PG    ++ DGS N++ GT++Q++G
Sbjct  299   AVQTVKDRILAGRAKQPVIFHGQLTGNMDVAIPQVPGGR-KVIFDGSVNLPEGTLSQDSG  357

Query  413   RLTIQGHPVIHASTSQSIANTVSSLGDNSVLTQPTSFTQDDWENRTFSFGSLVLKDTDFG  472
              L +QGHPVIHAS S S                P S+ Q DWENR F+  +L LKD+DF 
Sbjct  358   TLIFQGHPVIHASISGS---------------APVSLNQKDWENRQFTMKTLSLKDADFH  402

Query  473   LGRNATLNTTIQADNSSVTLGDSRVFIDKKDGQGTAFTLEEGTSVATKDADKSVFNGTVN  532
             L+RNA+LN+ I++DNS +TLG  R F+DK+DG G     EEGTSV+    D+S ++G + 
Sbjct  403   LSRNASLNSDIKSDNSHITLGSDRAFVDKNDGTGNYVIPEEGTSVPDTVNDRSQYEGNIT  462

Query  533   LDNQSVLNINEIFNGGIQANNSTVNISSDSAVLENS-TLTSTALNLNKGANVLASQSFVS  591
             L+++S L+I   F GGI+A +S+V+I+S   +L  + ++++++L ++ G+++ A +++ S
Sbjct  463   LNHNSALDIGSRFTGGIDAYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLTALNGLFS  522

Query  592   DGPVNIS-DATLSLNSRP--DEVSHTLLPVYDYAGSWNLKGDDARLNVGPYSMLSGNINV  648
             DG ++ + ++ ++L++ P  D  ++   +VY  +++ +L GD+A L++   +  SG+I+ 
Sbjct  523   DGHIQAGKNGKITLSGTPVKDTANQYAPAVY-LTDGYDLTGDNAALEITRGAHASGDIHA  581

Query  649   QDKGTVTLGGE--GELSPDLTLQNQMLYSLFNGYRNTWSGSLNAPDATVSMTDTQWSMNG  706
                +TVT+G++  +EL++  T  +    SL++GY  + +G++ +  A VSM ++ W++ G
Sbjct  582   SAASTVTIGSDTPAELASAETAASAFAGSLLEGYNAAFNGAITGGRADVSMHNALWTLGG  641

Query  707   NSTAGNMKLNRTIVGFNGGTSSFTTLTTDNLDAVQSAFVMRTDLNKADKLVINKSATGHD  766
             +S+  ++ +  + ++ + G  +F TLT ++LDA  S FV+RTDL++ADK+ +   ATG D
Sbjct  642   DSAIHSLTVRNSRIS-SEGDRTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGSD  700

Query  767   NSIWVNFLKKPSDKDTLDIPLVSAPEATADNLFRASTRVVGFSDVTPTLSVRKEDGKKEW  826
             NS+ V+F+++P++ ++L+IPLV+AP +T+ ++F+A+TRV GFS VTPTL V   +G+  W
Sbjct  701   NSLNVSFMNNPAQGQALNIPLVTAPAGTSAEMFKAGTRVTGFSRVTPTLHVDTSGGNTKW  760

Query  827   VLDGYQVARNDGQGKAAATFMHISYNNFITEVNNLNKRMGDLRDINGEAGTWVRLLNGSG  886
             +LDG++   + + +  A +FM+ +Y+NF+TEVNNLNKRMGDLRD NG+AG+W R+++G+G
Sbjct  761   ILDGFKAEADKAAAAKADSFMNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMSGAG  820

Query  887   SADGGFTDHYTLLQMGADRKHELGSMDLFTGVMATYTDTDASAGLYSGKTKSWGGGFYAS  946
             SADGG++D+YT +Q+G D+KHEL+++DLFTGV  TYTD+ A +  +SGKTKS GGG+YAS
Sbjct  821   SADGGYSDNYTHVQVGFDKKHELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYAS  880

Query  947   GLFRSGAYFDLIAKYIHNENKYDLNFAGAGKQNFRSHSLYAGAEVGYRYHLTDTTFVEPQ  1006
             +LF SGAY+DLI+KYIH++N Y  NFA+ G +++ +HS YAGAE GYRYHLT+ TF+EPQ
Sbjct  881   ALFESGAYIDLIGKYIHHDNDYTGNFASLGTKHYNTHSWYAGAETGYRYHLTEDTFIEPQ  940

Query  1007  AELVWGRLQGQTFNWNDSGMDVSMRRNSVNPLVGRTGVVSGKTFSGKDWSLTARAGLHYE  1066
             AELV G + G+TF W+D++MD+SM+    +PLVGRTGV  GKTFSGKDWS+TARAG   +
Sbjct  941   AELVYGAVSGKTFRWKDGDMDLSMKNRDFSPLVGRTGVELGKTFSGKDWSVTARAGTSWQ  1000

Query  1067  FDLTDSADVHLKDAAGEHQINGRKDGRMLYGVGLNARFGDNTRLGLEVERSAFGKYNTDD  1126
             FDL ++++  L+DA+GE +I+G KD+RML+ VG+NA++ DN R+GLE E+SAFGKYN D+
Sbjct  1001  FDLLNNGETVLRDASGEKRIKGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNVDN  1060

Query  1127  AINANIRYSF  1136
             A+NAN+RY F
Sbjct  1061  AVNANFRYMF  1070

31) ECABU_c03670 in NC_017631


> NC_004741_P1|8|G6|30064293|NP_838464.1|Shigella_flexneri_2a_str._2457T|-|15275..18487|pic|S3178|serine 
protease precurser
Length=1070

 Score =  829 bits (3138),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 528/1090 (49%), Positives = 798/1090 (74%), Gaps = 40/1090 (3%)

Query  305   EDNDAPVFFNASSGAPLQWKFDSSTGTGSLKQGSDEYAMHGQKGSDLNAGKNLTFLGHNG  364
             +D DAPV F ++ G PL+W +D ++GTG+L QGS + +MHGQK++DLNAGKNL F G+NG
Sbjct  3     DDFDAPVDFVSGLG-PLNWTYDKTSGTGTLSQGSKNWTMHGQKDNDLNAGKNLVFSGQNG  61

Query  365   QIDLENSVTQGAGSLTFTDDYTVTTSNGSTWTGAGIIVDKDASVNWQVNGVKGDNLHKIG  424
              I L +SVTQGAG L F D YTV++ +G TWTGAGII DK+++V W+VNGV GDNLHK+G
Sbjct  62    AIILKDSVTQGAGYLEFKDSYTVSAESGKTWTGAGIITDKGTNVTWKVNGVAGDNLHKLG  121

Query  425   EGTLVVQGTGVNEGGLKVGDGTVVLNQQADSSGHVQAFSSVNIASGRPTVVLADNQQVNP  484
             EGTL ++GTGVN GGLK GDG VVLNQQAD++G++QAFSSVN+ASGRPTVVL+D +QVNP
Sbjct  122   EGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGNIQAFSSVNLASGRPTVVLGDARQVNP  181

Query  485   DNISWGYRGGVLDVNGNDLTFHKLNAADYGATLGNSSDKTANITLDYQTRPADVKVNEWS  544
             DNISWGYRGG LD+NGN +TF +L+AADYGA + N++++ +++ LD +++ ++V     +
Sbjct  182   DNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKSQLLLDLKAQDTNVSEPTIG  241

Query  545   S----SNRGTVGSLYIYNNPYTHTVDYFILKTSSYG---WFPTGQVSNEHWEYVGHDQNS  597
             +    +  GT G+LY  +        ++ILK++SYG   W   +     +WE+VG ++N 
Sbjct  242   NISPFGGTGTPGNLY--SMILNSQTRFYILKSASYGNTLW-GNSLNDPAQWEFVGMNKNK  298

Query  598   AQALLANRI----NNKGYLYHGKLLGNINFSNKATPGTTGALVMDGSANMS-GTFTQENG  652
             A   + +RI     ++  ++HG+L GN++ +    PG    ++ DGS N++ GT++Q++G
Sbjct  299   AVQTVKDRILAGRAKQPVIFHGQLTGNMDVAIPQVPGGR-KVIFDGSVNLPEGTLSQDSG  357

Query  653   RLTIQGHPVIHASTSQSIANTVSSLGDNSVLTQPTSFTQDDWENRTFSFGSLVLKDTDFG  712
              L +QGHPVIHAS S S                P S+ Q DWENR F+  +L LKD+DF 
Sbjct  358   TLIFQGHPVIHASISGS---------------APVSLNQKDWENRQFTMKTLSLKDADFH  402

Query  713   LGRNATLNTTIQADNSSVTLGDSRVFIDKKDGQGTAFTLEEGTSVATKDADKSVFNGTVN  772
             L+RNA+LN+ I++DNS +TLG  R F+DK+DG G     EEGTSV+    D+S ++G + 
Sbjct  403   LSRNASLNSDIKSDNSHITLGSDRAFVDKNDGTGNYVIPEEGTSVPDTVNDRSQYEGNIT  462

Query  773   LDNQSVLNINEIFNGGIQANNSTVNISSDSAVLENS-TLTSTALNLNKGANVLASQSFVS  831
             L+++S L+I   F GGI+A +S+V+I+S   +L  + ++++++L ++ G+++ A +++ S
Sbjct  463   LNHNSALDIGSRFTGGIDAYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLTALNGLFS  522

Query  832   DGPVNIS-DATLSLNSRP--DEVSHTLLPVYDYAGSWNLKGDDARLNVGPYSMLSGNINV  888
             DG ++ + ++ ++L++ P  D  ++   +VY  +++ +L GD+A L++   +  SG+I+ 
Sbjct  523   DGHIQAGKNGKITLSGTPVKDTANQYAPAVY-LTDGYDLTGDNAALEITRGAHASGDIHA  581

Query  889   QDKGTVTLGGE--GELSPDLTLQNQMLYSLFNGYRNTWSGSLNAPDATVSMTDTQWSMNG  946
                +TVT+G++  +EL++  T  +    SL++GY  + +G++ +  A VSM ++ W++ G
Sbjct  582   SAASTVTIGSDTPAELASAETAASAFAGSLLEGYNAAFNGAITGGRADVSMHNALWTLGG  641

Query  947   NSTAGNMKLNRTIVGFNGGTSSFTTLTTDNLDAVQSAFVMRTDLNKADKLVINKSATGHD  1006
             +S+  ++ +  + ++ + G  +F TLT ++LDA  S FV+RTDL++ADK+ +   ATG D
Sbjct  642   DSAIHSLTVRNSRIS-SEGDRTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGSD  700

Query  1007  NSIWVNFLKKPSDKDTLDIPLVSAPEATADNLFRASTRVVGFSDVTPTLSVRKEDGKKEW  1066
             NS+ V+F+++P++ ++L+IPLV+AP +T+ ++F+A+TRV GFS VTPTL V   +G+  W
Sbjct  701   NSLNVSFMNNPAQGQALNIPLVTAPAGTSAEMFKAGTRVTGFSRVTPTLHVDTSGGNTKW  760

Query  1067  VLDGYQVARNDGQGKAAATFMHISYNNFITEVNNLNKRMGDLRDINGEAGTWVRLLNGSG  1126
             +LDG++   + + +  A +FM+ +Y+NF+TEVNNLNKRMGDLRD NG+AG+W R+++G+G
Sbjct  761   ILDGFKAEADKAAAAKADSFMNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMSGAG  820

Query  1127  SADGGFTDHYTLLQMGADRKHELGSMDLFTGVMATYTDTDASAGLYSGKTKSWGGGFYAS  1186
             SADGG++D+YT +Q+G D+KHEL+++DLFTGV  TYTD+ A +  +SGKTKS GGG+YAS
Sbjct  821   SADGGYSDNYTHVQVGFDKKHELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYAS  880

Query  1187  GLFRSGAYFDLIAKYIHNENKYDLNFAGAGKQNFRSHSLYAGAEVGYRYHLTDTTFVEPQ  1246
             +LF SGAY+DLI+KYIH++N Y  NFA+ G +++ +HS YAGAE GYRYHLT+ TF+EPQ
Sbjct  881   ALFESGAYIDLIGKYIHHDNDYTGNFASLGTKHYNTHSWYAGAETGYRYHLTEDTFIEPQ  940

Query  1247  AELVWGRLQGQTFNWNDSGMDVSMRRNSVNPLVGRTGVVSGKTFSGKDWSLTARAGLHYE  1306
             AELV G + G+TF W+D++MD+SM+    +PLVGRTGV  GKTFSGKDWS+TARAG   +
Sbjct  941   AELVYGAVSGKTFRWKDGDMDLSMKNRDFSPLVGRTGVELGKTFSGKDWSVTARAGTSWQ  1000

Query  1307  FDLTDSADVHLKDAAGEHQINGRKDGRMLYGVGLNARFGDNTRLGLEVERSAFGKYNTDD  1366
             FDL ++++  L+DA+GE +I+G KD+RML+ VG+NA++ DN R+GLE E+SAFGKYN D+
Sbjct  1001  FDLLNNGETVLRDASGEKRIKGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNVDN  1060

Query  1367  AINANIRYSF  1376
             A+NAN+RY F
Sbjct  1061  AVNANFRYMF  1070

32) vat in NC_008563


> NC_004741_P1|8|G6|30064293|NP_838464.1|Shigella_flexneri_2a_str._2457T|-|15275..18487|pic|S3178|serine 
protease precurser
Length=1070

 Score =  829 bits (3138),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 529/1090 (49%), Positives = 798/1090 (74%), Gaps = 40/1090 (3%)

Query  305   EDNDAPVFFNASSGAPLQWKFDSSTGTGSLKQGSDEYAMHGQKGSDLNAGKNLTFLGHNG  364
             +D DAPV F ++ G PL+W +D ++GTG+L QGS + +MHGQK++DLNAGKNL F G+NG
Sbjct  3     DDFDAPVDFVSGLG-PLNWTYDKTSGTGTLSQGSKNWTMHGQKDNDLNAGKNLVFSGQNG  61

Query  365   QIDLENSVTQGAGSLTFTDDYTVTTSNGSTWTGAGIIVDKDASVNWQVNGVKGDNLHKIG  424
              I L +SVTQGAG L F D YTV++ +G TWTGAGII DK+++V W+VNGV GDNLHK+G
Sbjct  62    AIILKDSVTQGAGYLEFKDSYTVSAESGKTWTGAGIITDKGTNVTWKVNGVAGDNLHKLG  121

Query  425   EGTLVVQGTGVNEGGLKVGDGTVVLNQQADSSGHVQAFSSVNIASGRPTVVLADNQQVNP  484
             EGTL ++GTGVN GGLK GDG VVLNQQAD++G++QAFSSVN+ASGRPTVVL+D +QVNP
Sbjct  122   EGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGNIQAFSSVNLASGRPTVVLGDARQVNP  181

Query  485   DNISWGYRGGVLDVNGNDLTFHKLNAADYGATLGNSSDKTANITLDYQTRPANVKVNEWS  544
             DNISWGYRGG LD+NGN +TF +L+AADYGA + N++++ +++ LD +++ +NV     +
Sbjct  182   DNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKSQLLLDLKAQDTNVSEPTIG  241

Query  545   S----SNRGTVGSLYIYNNPYTHTVDYFILKTSSYG---WFPTGQVSNEHWEYVGHDQNS  597
             +    +  GT G+LY  +        ++ILK++SYG   W   +     +WE+VG ++N 
Sbjct  242   NISPFGGTGTPGNLY--SMILNSQTRFYILKSASYGNTLW-GNSLNDPAQWEFVGMNKNK  298

Query  598   AQALLANRI----NNKGYLYHGKLLGNINFSNKATPGTTGALVMDGSANMS-GTFTQENG  652
             A   + +RI     ++  ++HG+L GN++ +    PG    ++ DGS N++ GT++Q++G
Sbjct  299   AVQTVKDRILAGRAKQPVIFHGQLTGNMDVAIPQVPGGR-KVIFDGSVNLPEGTLSQDSG  357

Query  653   RLTIQGHPVIHASTSQSIANTVSSLGDNSVLTQPTSFTQDDWENRTFSFGSLVLKDTDFG  712
              L +QGHPVIHAS S S                P S+ Q DWENR F+  +L LKD+DF 
Sbjct  358   TLIFQGHPVIHASISGS---------------APVSLNQKDWENRQFTMKTLSLKDADFH  402

Query  713   LGRNATLNTTIQADNSSVTLGDSRVFIDKKDGQGTAFTLEEGTSVATKDADKSVFNGTVN  772
             L+RNA+LN+ I++DNS +TLG  R F+DK+DG G     EEGTSV+    D+S ++G + 
Sbjct  403   LSRNASLNSDIKSDNSHITLGSDRAFVDKNDGTGNYVIPEEGTSVPDTVNDRSQYEGNIT  462

Query  773   LDNQSVLNINEIFNGGIQANNSTVNISSDSAVLENS-TLTSTALNLNKGANVLASQSFVS  831
             L+++S L+I   F GGI+A +S+V+I+S   +L  + ++++++L ++ G+++ A +++ S
Sbjct  463   LNHNSALDIGSRFTGGIDAYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLTALNGLFS  522

Query  832   DGPVNIS-DATLSLNSRP--DEVSHTLLPVYDYAGSWNLKGDDARLNVGPYSMLSGNINV  888
             DG ++ + ++ ++L++ P  D  ++   +VY  +++ +L GD+A L++   +  SG+I+ 
Sbjct  523   DGHIQAGKNGKITLSGTPVKDTANQYAPAVY-LTDGYDLTGDNAALEITRGAHASGDIHA  581

Query  889   QDKGTVTLGGE--GELSPDLTLQNQMLYSLFNGYRNTWSGSLNAPDATVSMTDTQWSMNG  946
                +TVT+G++  +EL++  T  +    SL++GY  + +G++ +  A VSM ++ W++ G
Sbjct  582   SAASTVTIGSDTPAELASAETAASAFAGSLLEGYNAAFNGAITGGRADVSMHNALWTLGG  641

Query  947   NSTAGNMKLNRTIVGFNGGTSSFTTLTTDNLDAVQSAFVMRTDLNKADKLVINKSATGHD  1006
             +S+  ++ +  + ++ + G  +F TLT ++LDA  S FV+RTDL++ADK+ +   ATG D
Sbjct  642   DSAIHSLTVRNSRIS-SEGDRTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGSD  700

Query  1007  NSIWVNFLKKPSDKDTLDIPLVSAPEATADNLFRASTRVVGFSDVTPTLSVRKEDGKKEW  1066
             NS+ V+F+++P++ ++L+IPLV+AP +T+ ++F+A+TRV GFS VTPTL V   +G+  W
Sbjct  701   NSLNVSFMNNPAQGQALNIPLVTAPAGTSAEMFKAGTRVTGFSRVTPTLHVDTSGGNTKW  760

Query  1067  VLDGYQVARNDGQGKAAATFMHISYNNFITEVNNLNKRMGDLRDINGEAGTWVRLLNGSG  1126
             +LDG++   + + +  A +FM+ +Y+NF+TEVNNLNKRMGDLRD NG+AG+W R+++G+G
Sbjct  761   ILDGFKAEADKAAAAKADSFMNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMSGAG  820

Query  1127  SADGGFTDHYTLLQMGADRKHELGSMDLFTGVMATYTDTDASAGLYSGKTKSWGGGFYAS  1186
             SADGG++D+YT +Q+G D+KHEL+++DLFTGV  TYTD+ A +  +SGKTKS GGG+YAS
Sbjct  821   SADGGYSDNYTHVQVGFDKKHELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYAS  880

Query  1187  GLFRSGAYFDLIAKYIHNENKYDLNFAGAGKQNFRSHSLYAGAEVGYRYHLTDTTFVEPQ  1246
             +LF SGAY+DLI+KYIH++N Y  NFA+ G +++ +HS YAGAE GYRYHLT+ TF+EPQ
Sbjct  881   ALFESGAYIDLIGKYIHHDNDYTGNFASLGTKHYNTHSWYAGAETGYRYHLTEDTFIEPQ  940

Query  1247  AELVWGRLQGQTFNWNDSGMDVSMRRNSVNPLVGRTGVVSGKTFSGKDWSLTARAGLHYE  1306
             AELV G + G+TF W+D++MD+SM+    +PLVGRTGV  GKTFSGKDWS+TARAG   +
Sbjct  941   AELVYGAVSGKTFRWKDGDMDLSMKNRDFSPLVGRTGVELGKTFSGKDWSVTARAGTSWQ  1000

Query  1307  FDLTDSADVHLKDAAGEHQINGRKDGRMLYGVGLNARFGDNTRLGLEVERSAFGKYNTDD  1366
             FDL ++++  L+DA+GE +I+G KD+RML+ VG+NA++ DN R+GLE E+SAFGKYN D+
Sbjct  1001  FDLLNNGETVLRDASGEKRIKGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNVDN  1060

Query  1367  AINANIRYSF  1376
             A+NAN+RY F
Sbjct  1061  AVNANFRYMF  1070

33) c0393 in NC_004431


> NC_004741_P1|8|G6|30064293|NP_838464.1|Shigella_flexneri_2a_str._2457T|-|15275..18487|pic|S3178|serine 
protease precurser
Length=1070

 Score =  829 bits (3138),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 528/1090 (49%), Positives = 798/1090 (74%), Gaps = 40/1090 (3%)

Query  305   EDNDAPVFFNASSGAPLQWKFDSSTGTGSLKQGSDEYAMHGQKGSDLNAGKNLTFLGHNG  364
             +D DAPV F ++ G PL+W +D ++GTG+L QGS + +MHGQK++DLNAGKNL F G+NG
Sbjct  3     DDFDAPVDFVSGLG-PLNWTYDKTSGTGTLSQGSKNWTMHGQKDNDLNAGKNLVFSGQNG  61

Query  365   QIDLENSVTQGAGSLTFTDDYTVTTSNGSTWTGAGIIVDKDASVNWQVNGVKGDNLHKIG  424
              I L +SVTQGAG L F D YTV++ +G TWTGAGII DK+++V W+VNGV GDNLHK+G
Sbjct  62    AIILKDSVTQGAGYLEFKDSYTVSAESGKTWTGAGIITDKGTNVTWKVNGVAGDNLHKLG  121

Query  425   EGTLVVQGTGVNEGGLKVGDGTVVLNQQADSSGHVQAFSSVNIASGRPTVVLADNQQVNP  484
             EGTL ++GTGVN GGLK GDG VVLNQQAD++G++QAFSSVN+ASGRPTVVL+D +QVNP
Sbjct  122   EGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGNIQAFSSVNLASGRPTVVLGDARQVNP  181

Query  485   DNISWGYRGGVLDVNGNDLTFHKLNAADYGATLGNSSDKTANITLDYQTRPADVKVNEWS  544
             DNISWGYRGG LD+NGN +TF +L+AADYGA + N++++ +++ LD +++ ++V     +
Sbjct  182   DNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKSQLLLDLKAQDTNVSEPTIG  241

Query  545   S----SNRGTVGSLYIYNNPYTHTVDYFILKTSSYG---WFPTGQVSNEHWEYVGHDQNS  597
             +    +  GT G+LY  +        ++ILK++SYG   W   +     +WE+VG ++N 
Sbjct  242   NISPFGGTGTPGNLY--SMILNSQTRFYILKSASYGNTLW-GNSLNDPAQWEFVGMNKNK  298

Query  598   AQALLANRI----NNKGYLYHGKLLGNINFSNKATPGTTGALVMDGSANMS-GTFTQENG  652
             A   + +RI     ++  ++HG+L GN++ +    PG    ++ DGS N++ GT++Q++G
Sbjct  299   AVQTVKDRILAGRAKQPVIFHGQLTGNMDVAIPQVPGGR-KVIFDGSVNLPEGTLSQDSG  357

Query  653   RLTIQGHPVIHASTSQSIANTVSSLGDNSVLTQPTSFTQDDWENRTFSFGSLVLKDTDFG  712
              L +QGHPVIHAS S S                P S+ Q DWENR F+  +L LKD+DF 
Sbjct  358   TLIFQGHPVIHASISGS---------------APVSLNQKDWENRQFTMKTLSLKDADFH  402

Query  713   LGRNATLNTTIQADNSSVTLGDSRVFIDKKDGQGTAFTLEEGTSVATKDADKSVFNGTVN  772
             L+RNA+LN+ I++DNS +TLG  R F+DK+DG G     EEGTSV+    D+S ++G + 
Sbjct  403   LSRNASLNSDIKSDNSHITLGSDRAFVDKNDGTGNYVIPEEGTSVPDTVNDRSQYEGNIT  462

Query  773   LDNQSVLNINEIFNGGIQANNSTVNISSDSAVLENS-TLTSTALNLNKGANVLASQSFVS  831
             L+++S L+I   F GGI+A +S+V+I+S   +L  + ++++++L ++ G+++ A +++ S
Sbjct  463   LNHNSALDIGSRFTGGIDAYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLTALNGLFS  522

Query  832   DGPVNIS-DATLSLNSRP--DEVSHTLLPVYDYAGSWNLKGDDARLNVGPYSMLSGNINV  888
             DG ++ + ++ ++L++ P  D  ++   +VY  +++ +L GD+A L++   +  SG+I+ 
Sbjct  523   DGHIQAGKNGKITLSGTPVKDTANQYAPAVY-LTDGYDLTGDNAALEITRGAHASGDIHA  581

Query  889   QDKGTVTLGGE--GELSPDLTLQNQMLYSLFNGYRNTWSGSLNAPDATVSMTDTQWSMNG  946
                +TVT+G++  +EL++  T  +    SL++GY  + +G++ +  A VSM ++ W++ G
Sbjct  582   SAASTVTIGSDTPAELASAETAASAFAGSLLEGYNAAFNGAITGGRADVSMHNALWTLGG  641

Query  947   NSTAGNMKLNRTIVGFNGGTSSFTTLTTDNLDAVQSAFVMRTDLNKADKLVINKSATGHD  1006
             +S+  ++ +  + ++ + G  +F TLT ++LDA  S FV+RTDL++ADK+ +   ATG D
Sbjct  642   DSAIHSLTVRNSRIS-SEGDRTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGSD  700

Query  1007  NSIWVNFLKKPSDKDTLDIPLVSAPEATADNLFRASTRVVGFSDVTPTLSVRKEDGKKEW  1066
             NS+ V+F+++P++ ++L+IPLV+AP +T+ ++F+A+TRV GFS VTPTL V   +G+  W
Sbjct  701   NSLNVSFMNNPAQGQALNIPLVTAPAGTSAEMFKAGTRVTGFSRVTPTLHVDTSGGNTKW  760

Query  1067  VLDGYQVARNDGQGKAAATFMHISYNNFITEVNNLNKRMGDLRDINGEAGTWVRLLNGSG  1126
             +LDG++   + + +  A +FM+ +Y+NF+TEVNNLNKRMGDLRD NG+AG+W R+++G+G
Sbjct  761   ILDGFKAEADKAAAAKADSFMNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMSGAG  820

Query  1127  SADGGFTDHYTLLQMGADRKHELGSMDLFTGVMATYTDTDASAGLYSGKTKSWGGGFYAS  1186
             SADGG++D+YT +Q+G D+KHEL+++DLFTGV  TYTD+ A +  +SGKTKS GGG+YAS
Sbjct  821   SADGGYSDNYTHVQVGFDKKHELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYAS  880

Query  1187  GLFRSGAYFDLIAKYIHNENKYDLNFAGAGKQNFRSHSLYAGAEVGYRYHLTDTTFVEPQ  1246
             +LF SGAY+DLI+KYIH++N Y  NFA+ G +++ +HS YAGAE GYRYHLT+ TF+EPQ
Sbjct  881   ALFESGAYIDLIGKYIHHDNDYTGNFASLGTKHYNTHSWYAGAETGYRYHLTEDTFIEPQ  940

Query  1247  AELVWGRLQGQTFNWNDSGMDVSMRRNSVNPLVGRTGVVSGKTFSGKDWSLTARAGLHYE  1306
             AELV G + G+TF W+D++MD+SM+    +PLVGRTGV  GKTFSGKDWS+TARAG   +
Sbjct  941   AELVYGAVSGKTFRWKDGDMDLSMKNRDFSPLVGRTGVELGKTFSGKDWSVTARAGTSWQ  1000

Query  1307  FDLTDSADVHLKDAAGEHQINGRKDGRMLYGVGLNARFGDNTRLGLEVERSAFGKYNTDD  1366
             FDL ++++  L+DA+GE +I+G KD+RML+ VG+NA++ DN R+GLE E+SAFGKYN D+
Sbjct  1001  FDLLNNGETVLRDASGEKRIKGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNVDN  1060

Query  1367  AINANIRYSF  1376
             A+NAN+RY F
Sbjct  1061  AVNANFRYMF  1070

34) LF82_043 in NC_011993


> NC_004741_P1|8|G6|30064293|NP_838464.1|Shigella_flexneri_2a_str._2457T|-|15275..18487|pic|S3178|serine 
protease precurser
Length=1070

 Score =  829 bits (3138),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 528/1090 (49%), Positives = 798/1090 (74%), Gaps = 40/1090 (3%)

Query  305   EDNDAPVFFNASSGAPLQWKFDSSTGTGSLKQGSDEYAMHGQKGSDLNAGKNLTFLGHNG  364
             +D DAPV F ++ G PL+W +D ++GTG+L QGS + +MHGQK++DLNAGKNL F G+NG
Sbjct  3     DDFDAPVDFVSGLG-PLNWTYDKTSGTGTLSQGSKNWTMHGQKDNDLNAGKNLVFSGQNG  61

Query  365   QIDLENSVTQGAGSLTFTDDYTVTTSNGSTWTGAGIIVDKDASVNWQVNGVKGDNLHKIG  424
              I L +SVTQGAG L F D YTV++ +G TWTGAGII DK+++V W+VNGV GDNLHK+G
Sbjct  62    AIILKDSVTQGAGYLEFKDSYTVSAESGKTWTGAGIITDKGTNVTWKVNGVAGDNLHKLG  121

Query  425   EGTLVVQGTGVNEGGLKVGDGTVVLNQQADSSGHVQAFSSVNIASGRPTVVLADNQQVNP  484
             EGTL ++GTGVN GGLK GDG VVLNQQAD++G++QAFSSVN+ASGRPTVVL+D +QVNP
Sbjct  122   EGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGNIQAFSSVNLASGRPTVVLGDARQVNP  181

Query  485   DNISWGYRGGVLDVNGNDLTFHKLNAADYGATLGNSSDKTANITLDYQTRPADVKVNEWS  544
             DNISWGYRGG LD+NGN +TF +L+AADYGA + N++++ +++ LD +++ ++V     +
Sbjct  182   DNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKSQLLLDLKAQDTNVSEPTIG  241

Query  545   S----SNRGTVGSLYIYNNPYTHTVDYFILKTSSYG---WFPTGQVSNEHWEYVGHDQNS  597
             +    +  GT G+LY  +        ++ILK++SYG   W   +     +WE+VG ++N 
Sbjct  242   NISPFGGTGTPGNLY--SMILNSQTRFYILKSASYGNTLW-GNSLNDPAQWEFVGMNKNK  298

Query  598   AQALLANRI----NNKGYLYHGKLLGNINFSNKATPGTTGALVMDGSANMS-GTFTQENG  652
             A   + +RI     ++  ++HG+L GN++ +    PG    ++ DGS N++ GT++Q++G
Sbjct  299   AVQTVKDRILAGRAKQPVIFHGQLTGNMDVAIPQVPGGR-KVIFDGSVNLPEGTLSQDSG  357

Query  653   RLTIQGHPVIHASTSQSIANTVSSLGDNSVLTQPTSFTQDDWENRTFSFGSLVLKDTDFG  712
              L +QGHPVIHAS S S                P S+ Q DWENR F+  +L LKD+DF 
Sbjct  358   TLIFQGHPVIHASISGS---------------APVSLNQKDWENRQFTMKTLSLKDADFH  402

Query  713   LGRNATLNTTIQADNSSVTLGDSRVFIDKKDGQGTAFTLEEGTSVATKDADKSVFNGTVN  772
             L+RNA+LN+ I++DNS +TLG  R F+DK+DG G     EEGTSV+    D+S ++G + 
Sbjct  403   LSRNASLNSDIKSDNSHITLGSDRAFVDKNDGTGNYVIPEEGTSVPDTVNDRSQYEGNIT  462

Query  773   LDNQSVLNINEIFNGGIQANNSTVNISSDSAVLENS-TLTSTALNLNKGANVLASQSFVS  831
             L+++S L+I   F GGI+A +S+V+I+S   +L  + ++++++L ++ G+++ A +++ S
Sbjct  463   LNHNSALDIGSRFTGGIDAYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLTALNGLFS  522

Query  832   DGPVNIS-DATLSLNSRP--DEVSHTLLPVYDYAGSWNLKGDDARLNVGPYSMLSGNINV  888
             DG ++ + ++ ++L++ P  D  ++   +VY  +++ +L GD+A L++   +  SG+I+ 
Sbjct  523   DGHIQAGKNGKITLSGTPVKDTANQYAPAVY-LTDGYDLTGDNAALEITRGAHASGDIHA  581

Query  889   QDKGTVTLGGE--GELSPDLTLQNQMLYSLFNGYRNTWSGSLNAPDATVSMTDTQWSMNG  946
                +TVT+G++  +EL++  T  +    SL++GY  + +G++ +  A VSM ++ W++ G
Sbjct  582   SAASTVTIGSDTPAELASAETAASAFAGSLLEGYNAAFNGAITGGRADVSMHNALWTLGG  641

Query  947   NSTAGNMKLNRTIVGFNGGTSSFTTLTTDNLDAVQSAFVMRTDLNKADKLVINKSATGHD  1006
             +S+  ++ +  + ++ + G  +F TLT ++LDA  S FV+RTDL++ADK+ +   ATG D
Sbjct  642   DSAIHSLTVRNSRIS-SEGDRTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGSD  700

Query  1007  NSIWVNFLKKPSDKDTLDIPLVSAPEATADNLFRASTRVVGFSDVTPTLSVRKEDGKKEW  1066
             NS+ V+F+++P++ ++L+IPLV+AP +T+ ++F+A+TRV GFS VTPTL V   +G+  W
Sbjct  701   NSLNVSFMNNPAQGQALNIPLVTAPAGTSAEMFKAGTRVTGFSRVTPTLHVDTSGGNTKW  760

Query  1067  VLDGYQVARNDGQGKAAATFMHISYNNFITEVNNLNKRMGDLRDINGEAGTWVRLLNGSG  1126
             +LDG++   + + +  A +FM+ +Y+NF+TEVNNLNKRMGDLRD NG+AG+W R+++G+G
Sbjct  761   ILDGFKAEADKAAAAKADSFMNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMSGAG  820

Query  1127  SADGGFTDHYTLLQMGADRKHELGSMDLFTGVMATYTDTDASAGLYSGKTKSWGGGFYAS  1186
             SADGG++D+YT +Q+G D+KHEL+++DLFTGV  TYTD+ A +  +SGKTKS GGG+YAS
Sbjct  821   SADGGYSDNYTHVQVGFDKKHELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYAS  880

Query  1187  GLFRSGAYFDLIAKYIHNENKYDLNFAGAGKQNFRSHSLYAGAEVGYRYHLTDTTFVEPQ  1246
             +LF SGAY+DLI+KYIH++N Y  NFA+ G +++ +HS YAGAE GYRYHLT+ TF+EPQ
Sbjct  881   ALFESGAYIDLIGKYIHHDNDYTGNFASLGTKHYNTHSWYAGAETGYRYHLTEDTFIEPQ  940

Query  1247  AELVWGRLQGQTFNWNDSGMDVSMRRNSVNPLVGRTGVVSGKTFSGKDWSLTARAGLHYE  1306
             AELV G + G+TF W+D++MD+SM+    +PLVGRTGV  GKTFSGKDWS+TARAG   +
Sbjct  941   AELVYGAVSGKTFRWKDGDMDLSMKNRDFSPLVGRTGVELGKTFSGKDWSVTARAGTSWQ  1000

Query  1307  FDLTDSADVHLKDAAGEHQINGRKDGRMLYGVGLNARFGDNTRLGLEVERSAFGKYNTDD  1366
             FDL ++++  L+DA+GE +I+G KD+RML+ VG+NA++ DN R+GLE E+SAFGKYN D+
Sbjct  1001  FDLLNNGETVLRDASGEKRIKGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNVDN  1060

Query  1367  AINANIRYSF  1376
             A+NAN+RY F
Sbjct  1061  AVNANFRYMF  1070

35) NRG857_01335 in NC_017634


> NC_004741_P1|8|G6|30064293|NP_838464.1|Shigella_flexneri_2a_str._2457T|-|15275..18487|pic|S3178|serine 
protease precurser
Length=1070

 Score =  829 bits (3138),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 528/1090 (49%), Positives = 798/1090 (74%), Gaps = 40/1090 (3%)

Query  305   EDNDAPVFFNASSGAPLQWKFDSSTGTGSLKQGSDEYAMHGQKGSDLNAGKNLTFLGHNG  364
             +D DAPV F ++ G PL+W +D ++GTG+L QGS + +MHGQK++DLNAGKNL F G+NG
Sbjct  3     DDFDAPVDFVSGLG-PLNWTYDKTSGTGTLSQGSKNWTMHGQKDNDLNAGKNLVFSGQNG  61

Query  365   QIDLENSVTQGAGSLTFTDDYTVTTSNGSTWTGAGIIVDKDASVNWQVNGVKGDNLHKIG  424
              I L +SVTQGAG L F D YTV++ +G TWTGAGII DK+++V W+VNGV GDNLHK+G
Sbjct  62    AIILKDSVTQGAGYLEFKDSYTVSAESGKTWTGAGIITDKGTNVTWKVNGVAGDNLHKLG  121

Query  425   EGTLVVQGTGVNEGGLKVGDGTVVLNQQADSSGHVQAFSSVNIASGRPTVVLADNQQVNP  484
             EGTL ++GTGVN GGLK GDG VVLNQQAD++G++QAFSSVN+ASGRPTVVL+D +QVNP
Sbjct  122   EGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGNIQAFSSVNLASGRPTVVLGDARQVNP  181

Query  485   DNISWGYRGGVLDVNGNDLTFHKLNAADYGATLGNSSDKTANITLDYQTRPADVKVNEWS  544
             DNISWGYRGG LD+NGN +TF +L+AADYGA + N++++ +++ LD +++ ++V     +
Sbjct  182   DNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKSQLLLDLKAQDTNVSEPTIG  241

Query  545   S----SNRGTVGSLYIYNNPYTHTVDYFILKTSSYG---WFPTGQVSNEHWEYVGHDQNS  597
             +    +  GT G+LY  +        ++ILK++SYG   W   +     +WE+VG ++N 
Sbjct  242   NISPFGGTGTPGNLY--SMILNSQTRFYILKSASYGNTLW-GNSLNDPAQWEFVGMNKNK  298

Query  598   AQALLANRI----NNKGYLYHGKLLGNINFSNKATPGTTGALVMDGSANMS-GTFTQENG  652
             A   + +RI     ++  ++HG+L GN++ +    PG    ++ DGS N++ GT++Q++G
Sbjct  299   AVQTVKDRILAGRAKQPVIFHGQLTGNMDVAIPQVPGGR-KVIFDGSVNLPEGTLSQDSG  357

Query  653   RLTIQGHPVIHASTSQSIANTVSSLGDNSVLTQPTSFTQDDWENRTFSFGSLVLKDTDFG  712
              L +QGHPVIHAS S S                P S+ Q DWENR F+  +L LKD+DF 
Sbjct  358   TLIFQGHPVIHASISGS---------------APVSLNQKDWENRQFTMKTLSLKDADFH  402

Query  713   LGRNATLNTTIQADNSSVTLGDSRVFIDKKDGQGTAFTLEEGTSVATKDADKSVFNGTVN  772
             L+RNA+LN+ I++DNS +TLG  R F+DK+DG G     EEGTSV+    D+S ++G + 
Sbjct  403   LSRNASLNSDIKSDNSHITLGSDRAFVDKNDGTGNYVIPEEGTSVPDTVNDRSQYEGNIT  462

Query  773   LDNQSVLNINEIFNGGIQANNSTVNISSDSAVLENS-TLTSTALNLNKGANVLASQSFVS  831
             L+++S L+I   F GGI+A +S+V+I+S   +L  + ++++++L ++ G+++ A +++ S
Sbjct  463   LNHNSALDIGSRFTGGIDAYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLTALNGLFS  522

Query  832   DGPVNIS-DATLSLNSRP--DEVSHTLLPVYDYAGSWNLKGDDARLNVGPYSMLSGNINV  888
             DG ++ + ++ ++L++ P  D  ++   +VY  +++ +L GD+A L++   +  SG+I+ 
Sbjct  523   DGHIQAGKNGKITLSGTPVKDTANQYAPAVY-LTDGYDLTGDNAALEITRGAHASGDIHA  581

Query  889   QDKGTVTLGGE--GELSPDLTLQNQMLYSLFNGYRNTWSGSLNAPDATVSMTDTQWSMNG  946
                +TVT+G++  +EL++  T  +    SL++GY  + +G++ +  A VSM ++ W++ G
Sbjct  582   SAASTVTIGSDTPAELASAETAASAFAGSLLEGYNAAFNGAITGGRADVSMHNALWTLGG  641

Query  947   NSTAGNMKLNRTIVGFNGGTSSFTTLTTDNLDAVQSAFVMRTDLNKADKLVINKSATGHD  1006
             +S+  ++ +  + ++ + G  +F TLT ++LDA  S FV+RTDL++ADK+ +   ATG D
Sbjct  642   DSAIHSLTVRNSRIS-SEGDRTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGSD  700

Query  1007  NSIWVNFLKKPSDKDTLDIPLVSAPEATADNLFRASTRVVGFSDVTPTLSVRKEDGKKEW  1066
             NS+ V+F+++P++ ++L+IPLV+AP +T+ ++F+A+TRV GFS VTPTL V   +G+  W
Sbjct  701   NSLNVSFMNNPAQGQALNIPLVTAPAGTSAEMFKAGTRVTGFSRVTPTLHVDTSGGNTKW  760

Query  1067  VLDGYQVARNDGQGKAAATFMHISYNNFITEVNNLNKRMGDLRDINGEAGTWVRLLNGSG  1126
             +LDG++   + + +  A +FM+ +Y+NF+TEVNNLNKRMGDLRD NG+AG+W R+++G+G
Sbjct  761   ILDGFKAEADKAAAAKADSFMNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMSGAG  820

Query  1127  SADGGFTDHYTLLQMGADRKHELGSMDLFTGVMATYTDTDASAGLYSGKTKSWGGGFYAS  1186
             SADGG++D+YT +Q+G D+KHEL+++DLFTGV  TYTD+ A +  +SGKTKS GGG+YAS
Sbjct  821   SADGGYSDNYTHVQVGFDKKHELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYAS  880

Query  1187  GLFRSGAYFDLIAKYIHNENKYDLNFAGAGKQNFRSHSLYAGAEVGYRYHLTDTTFVEPQ  1246
             +LF SGAY+DLI+KYIH++N Y  NFA+ G +++ +HS YAGAE GYRYHLT+ TF+EPQ
Sbjct  881   ALFESGAYIDLIGKYIHHDNDYTGNFASLGTKHYNTHSWYAGAETGYRYHLTEDTFIEPQ  940

Query  1247  AELVWGRLQGQTFNWNDSGMDVSMRRNSVNPLVGRTGVVSGKTFSGKDWSLTARAGLHYE  1306
             AELV G + G+TF W+D++MD+SM+    +PLVGRTGV  GKTFSGKDWS+TARAG   +
Sbjct  941   AELVYGAVSGKTFRWKDGDMDLSMKNRDFSPLVGRTGVELGKTFSGKDWSVTARAGTSWQ  1000

Query  1307  FDLTDSADVHLKDAAGEHQINGRKDGRMLYGVGLNARFGDNTRLGLEVERSAFGKYNTDD  1366
             FDL ++++  L+DA+GE +I+G KD+RML+ VG+NA++ DN R+GLE E+SAFGKYN D+
Sbjct  1001  FDLLNNGETVLRDASGEKRIKGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNVDN  1060

Query  1367  AINANIRYSF  1376
             A+NAN+RY F
Sbjct  1061  AVNANFRYMF  1070

36) vat in NC_011742


> NC_004741_P1|8|G6|30064293|NP_838464.1|Shigella_flexneri_2a_str._2457T|-|15275..18487|pic|S3178|serine 
protease precurser
Length=1070

 Score =  829 bits (3138),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 529/1090 (49%), Positives = 798/1090 (74%), Gaps = 40/1090 (3%)

Query  305   EDNDAPVFFNASSGAPLQWKFDSSTGTGSLKQGSDEYAMHGQKGSDLNAGKNLTFLGHNG  364
             +D DAPV F ++ G PL+W +D ++GTG+L QGS + +MHGQK++DLNAGKNL F G+NG
Sbjct  3     DDFDAPVDFVSGLG-PLNWTYDKTSGTGTLSQGSKNWTMHGQKDNDLNAGKNLVFSGQNG  61

Query  365   QIDLENSVTQGAGSLTFTDDYTVTTSNGSTWTGAGIIVDKDASVNWQVNGVKGDNLHKIG  424
              I L +SVTQGAG L F D YTV++ +G TWTGAGII DK+++V W+VNGV GDNLHK+G
Sbjct  62    AIILKDSVTQGAGYLEFKDSYTVSAESGKTWTGAGIITDKGTNVTWKVNGVAGDNLHKLG  121

Query  425   EGTLVVQGTGVNEGGLKVGDGTVVLNQQADSSGHVQAFSSVNIASGRPTVVLADNQQVNP  484
             EGTL ++GTGVN GGLK GDG VVLNQQAD++G++QAFSSVN+ASGRPTVVL+D +QVNP
Sbjct  122   EGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGNIQAFSSVNLASGRPTVVLGDARQVNP  181

Query  485   DNISWGYRGGVLDVNGNDLTFHKLNAADYGATLGNSSDKTANITLDYQTRPANVKVNEWS  544
             DNISWGYRGG LD+NGN +TF +L+AADYGA + N++++ +++ LD +++ +NV     +
Sbjct  182   DNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKSQLLLDLKAQDTNVSEPTIG  241

Query  545   S----SNRGTVGSLYIYNNPYTHTVDYFILKTSSYG---WFPTGQVSNEHWEYVGHDQNS  597
             +    +  GT G+LY  +        ++ILK++SYG   W   +     +WE+VG ++N 
Sbjct  242   NISPFGGTGTPGNLY--SMILNSQTRFYILKSASYGNTLW-GNSLNDPAQWEFVGMNKNK  298

Query  598   AQALLANRI----NNKGYLYHGKLLGNINFSNKATPGTTGALVMDGSANMS-GTFTQENG  652
             A   + +RI     ++  ++HG+L GN++ +    PG    ++ DGS N++ GT++Q++G
Sbjct  299   AVQTVKDRILAGRAKQPVIFHGQLTGNMDVAIPQVPGGR-KVIFDGSVNLPEGTLSQDSG  357

Query  653   RLTIQGHPVIHASTSQSIANTVSSLGDNSVLTQPTSFTQDDWENRTFSFGSLVLKDTDFG  712
              L +QGHPVIHAS S S                P S+ Q DWENR F+  +L LKD+DF 
Sbjct  358   TLIFQGHPVIHASISGS---------------APVSLNQKDWENRQFTMKTLSLKDADFH  402

Query  713   LGRNATLNTTIQADNSSVTLGDSRVFIDKKDGQGTAFTLEEGTSVATKDADKSVFNGTVN  772
             L+RNA+LN+ I++DNS +TLG  R F+DK+DG G     EEGTSV+    D+S ++G + 
Sbjct  403   LSRNASLNSDIKSDNSHITLGSDRAFVDKNDGTGNYVIPEEGTSVPDTVNDRSQYEGNIT  462

Query  773   LDNQSVLNINEIFNGGIQANNSTVNISSDSAVLENS-TLTSTALNLNKGANVLASQSFVS  831
             L+++S L+I   F GGI+A +S+V+I+S   +L  + ++++++L ++ G+++ A +++ S
Sbjct  463   LNHNSALDIGSRFTGGIDAYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLTALNGLFS  522

Query  832   DGPVNIS-DATLSLNSRP--DEVSHTLLPVYDYAGSWNLKGDDARLNVGPYSMLSGNINV  888
             DG ++ + ++ ++L++ P  D  ++   +VY  +++ +L GD+A L++   +  SG+I+ 
Sbjct  523   DGHIQAGKNGKITLSGTPVKDTANQYAPAVY-LTDGYDLTGDNAALEITRGAHASGDIHA  581

Query  889   QDKGTVTLGGE--GELSPDLTLQNQMLYSLFNGYRNTWSGSLNAPDATVSMTDTQWSMNG  946
                +TVT+G++  +EL++  T  +    SL++GY  + +G++ +  A VSM ++ W++ G
Sbjct  582   SAASTVTIGSDTPAELASAETAASAFAGSLLEGYNAAFNGAITGGRADVSMHNALWTLGG  641

Query  947   NSTAGNMKLNRTIVGFNGGTSSFTTLTTDNLDAVQSAFVMRTDLNKADKLVINKSATGHD  1006
             +S+  ++ +  + ++ + G  +F TLT ++LDA  S FV+RTDL++ADK+ +   ATG D
Sbjct  642   DSAIHSLTVRNSRIS-SEGDRTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGSD  700

Query  1007  NSIWVNFLKKPSDKDTLDIPLVSAPEATADNLFRASTRVVGFSDVTPTLSVRKEDGKKEW  1066
             NS+ V+F+++P++ ++L+IPLV+AP +T+ ++F+A+TRV GFS VTPTL V   +G+  W
Sbjct  701   NSLNVSFMNNPAQGQALNIPLVTAPAGTSAEMFKAGTRVTGFSRVTPTLHVDTSGGNTKW  760

Query  1067  VLDGYQVARNDGQGKAAATFMHISYNNFITEVNNLNKRMGDLRDINGEAGTWVRLLNGSG  1126
             +LDG++   + + +  A +FM+ +Y+NF+TEVNNLNKRMGDLRD NG+AG+W R+++G+G
Sbjct  761   ILDGFKAEADKAAAAKADSFMNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMSGAG  820

Query  1127  SADGGFTDHYTLLQMGADRKHELGSMDLFTGVMATYTDTDASAGLYSGKTKSWGGGFYAS  1186
             SADGG++D+YT +Q+G D+KHEL+++DLFTGV  TYTD+ A +  +SGKTKS GGG+YAS
Sbjct  821   SADGGYSDNYTHVQVGFDKKHELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYAS  880

Query  1187  GLFRSGAYFDLIAKYIHNENKYDLNFAGAGKQNFRSHSLYAGAEVGYRYHLTDTTFVEPQ  1246
             +LF SGAY+DLI+KYIH++N Y  NFA+ G +++ +HS YAGAE GYRYHLT+ TF+EPQ
Sbjct  881   ALFESGAYIDLIGKYIHHDNDYTGNFASLGTKHYNTHSWYAGAETGYRYHLTEDTFIEPQ  940

Query  1247  AELVWGRLQGQTFNWNDSGMDVSMRRNSVNPLVGRTGVVSGKTFSGKDWSLTARAGLHYE  1306
             AELV G + G+TF W+D++MD+SM+    +PLVGRTGV  GKTFSGKDWS+TARAG   +
Sbjct  941   AELVYGAVSGKTFRWKDGDMDLSMKNRDFSPLVGRTGVELGKTFSGKDWSVTARAGTSWQ  1000

Query  1307  FDLTDSADVHLKDAAGEHQINGRKDGRMLYGVGLNARFGDNTRLGLEVERSAFGKYNTDD  1366
             FDL ++++  L+DA+GE +I+G KD+RML+ VG+NA++ DN R+GLE E+SAFGKYN D+
Sbjct  1001  FDLLNNGETVLRDASGEKRIKGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNVDN  1060

Query  1367  AINANIRYSF  1376
             A+NAN+RY F
Sbjct  1061  AVNANFRYMF  1070

37) hbp in NC_017628


> NC_004741_P1|8|G6|30064293|NP_838464.1|Shigella_flexneri_2a_str._2457T|-|15275..18487|pic|S3178|serine 
protease precurser
Length=1070

 Score =  828 bits (3133),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 527/1090 (49%), Positives = 798/1090 (74%), Gaps = 40/1090 (3%)

Query  305   EDNDAPVFFNASSGAPLQWKFDSSTGTGSLKQGSDEYAMHGQKGSDLNAGKNLTFLGHNG  364
             +D DAPV F ++ G PL+W +D ++GTG+L QGS + +MHGQK++DLNAGKNL F G+NG
Sbjct  3     DDFDAPVDFVSGLG-PLNWTYDKTSGTGTLSQGSKNWTMHGQKDNDLNAGKNLVFSGQNG  61

Query  365   QIDLENSVTQGAGSLTFTDDYTVTTSNGSTWTGAGIIVDKDASVNWQVNGVKGDNLHKIG  424
              I L +SVTQGAG L F D YTV++ +G TWTGAGII DK+++V W+VNGV GDNLHK+G
Sbjct  62    AIILKDSVTQGAGYLEFKDSYTVSAESGKTWTGAGIITDKGTNVTWKVNGVAGDNLHKLG  121

Query  425   EGTLVVQGTGVNEGGLKVGDGTVVLNQQADSSGHVQAFSSVNIASGRPTVVLADNQQVNP  484
             EGTL ++GTGVN GGLK GDG VVLNQQAD++G++QAFSSVN+ASGRPTVVL+D +QVNP
Sbjct  122   EGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGNIQAFSSVNLASGRPTVVLGDARQVNP  181

Query  485   DNISWGYRGGVLDVNGNDLTFHKLNAADYGATLGNSSDKTANITLDYQTRPADVKVNEWS  544
             DNISWGYRGG LD+NGN +TF +L+AADYGA + N++++ +++ LD +++ ++V     +
Sbjct  182   DNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKSQLLLDLKAQDTNVSEPTIG  241

Query  545   S----SNRGTVGSLYIYNNPYTHTVDYFILKTSSYG---WFPTGQVSNEHWEYVGHDQNS  597
             +    +  GT G+LY  +        ++ILK++SYG   W   +     +WE+VG ++N 
Sbjct  242   NISPFGGTGTPGNLY--SMILNSQTRFYILKSASYGNTLW-GNSLNDPAQWEFVGMNKNK  298

Query  598   AQALLANRI----NNKGYLYHGKLLGNINFSNKATPGTTGALVMDGSANMS-GTFTQENG  652
             A   + +RI     ++  ++HG+L GN++ +    PG    ++ DGS N++ GT++Q++G
Sbjct  299   AVQTVKDRILAGRAKQPVIFHGQLTGNMDVAIPQVPGGR-KVIFDGSVNLPEGTLSQDSG  357

Query  653   RLTIQGHPVIHASTSQSIANTVSSLGDNSVLTQPTSFTQDDWENRTFSFGSLVLKDTDFG  712
              L +QGHPVIHAS S S                P S+ Q DWENR F+  +L LKD+DF 
Sbjct  358   TLIFQGHPVIHASISGS---------------APVSLNQKDWENRQFTMKTLSLKDADFH  402

Query  713   LGRNATLNTTIQADNSSVTLGDSRVFIDKKDGQGTAFTLEEGTSVATKDADKSVFNGTVN  772
             L+RNA+LN+ I++DNS +TLG  R F+DK+DG G     EEGTSV+    D+S ++G + 
Sbjct  403   LSRNASLNSDIKSDNSHITLGSDRAFVDKNDGTGNYVIPEEGTSVPDTVNDRSQYEGNIT  462

Query  773   LDNQSVLNINEIFNGGIQANNSTVNISSDSAVLENS-TLTSTALNLNKGANVLASQSFVS  831
             L+++S L+I   F GGI+A +S+V+I+S   +L  + ++++++L ++ G+++ A +++ S
Sbjct  463   LNHNSALDIGSRFTGGIDAYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLTALNGLFS  522

Query  832   DGPVNIS-DATLSLNSRP--DEVSHTLLPVYDYAGSWNLKGDDARLNVGPYSMLSGNINV  888
             DG ++ + ++ ++L++ P  D  ++   +VY  +++ +L GD+A L++   +  SG+I+ 
Sbjct  523   DGHIQAGKNGKITLSGTPVKDTANQYAPAVY-LTDGYDLTGDNAALEITRGAHASGDIHA  581

Query  889   QDKGTVTLGGE--GELSPDLTLQNQMLYSLFNGYRNTWSGSLNAPDATVSMTDTQWSMNG  946
                +TVT+G++  +EL++  T  +    SL++GY  + +G++ +  A VSM ++ W++ G
Sbjct  582   SAASTVTIGSDTPAELASAETAASAFAGSLLEGYNAAFNGAITGGRADVSMHNALWTLGG  641

Query  947   NSTAGNMKLNRTIVGFNGGTSSFTTLTTDNLDAVQSAFVMRTDLNKADKLVINKSATGHD  1006
             +S+  ++ +  + ++ + G  +F TLT ++LDA  S FV+RTDL++ADK+ +   ATG D
Sbjct  642   DSAIHSLTVRNSRIS-SEGDRTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGSD  700

Query  1007  NSIWVNFLKKPSDKDTLDIPLVSAPEATADNLFRASTRVVGFSDVTPTLSVRKEDGKKEW  1066
             NS+ V+F+++P++ ++L+IPLV+AP +T+ ++F+A+TRV GFS VTPTL V   +G+  W
Sbjct  701   NSLNVSFMNNPAQGQALNIPLVTAPAGTSAEMFKAGTRVTGFSRVTPTLHVDTSGGNTKW  760

Query  1067  VLDGYQVARNDGQGKAAATFMHISYNNFITEVNNLNKRMGDLRDINGEAGTWVRLLNGSG  1126
             +LDG++   + + +  A +FM+ +Y+NF+TEVNNLNKRMGDLRD NG+AG+W R+++G+G
Sbjct  761   ILDGFKAEADKAAAAKADSFMNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMSGAG  820

Query  1127  SADGGFTDHYTLLQMGADRKHELGSMDLFTGVMATYTDTDASAGLYSGKTKSWGGGFYAS  1186
             SADGG++D+YT +Q+G D+KHEL+++DLFTGV  TYTD+ A +  +SGKTKS GGG+YAS
Sbjct  821   SADGGYSDNYTHVQVGFDKKHELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYAS  880

Query  1187  GLFRSGAYFDLIAKYIHNENKYDLNFAGAGKQNFRSHSLYAGAEVGYRYHLTDTTFVEPQ  1246
             +LF SGAY+DLI+KYIH++N Y  NFA+ G +++ +HS YAGAE GYRYHLT+ TF+EPQ
Sbjct  881   ALFESGAYIDLIGKYIHHDNDYTGNFASLGTKHYNTHSWYAGAETGYRYHLTEDTFIEPQ  940

Query  1247  AELVWGRLQGQTFNWNDSGMDVSMRRNSVNPLVGRTGVVSGKTFSGKDWSLTGRAGLHYE  1306
             AELV G + G+TF W+D++MD+SM+    +PLVGRTGV  GKTFSGKDWS+T+RAG   +
Sbjct  941   AELVYGAVSGKTFRWKDGDMDLSMKNRDFSPLVGRTGVELGKTFSGKDWSVTARAGTSWQ  1000

Query  1307  FDLTDSADVHLKDAAGEHQINGRKDGRMLYGVGLNARFGDNTRLGLEVERSAFGKYNTDD  1366
             FDL ++++  L+DA+GE +I+G KD+RML+ VG+NA++ DN R+GLE E+SAFGKYN D+
Sbjct  1001  FDLLNNGETVLRDASGEKRIKGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNVDN  1060

Query  1367  AINANIRYSF  1376
             A+NAN+RY F
Sbjct  1061  AVNANFRYMF  1070

38) ECP_0345 in NC_008253


> NC_004741_P1|8|G6|30064293|NP_838464.1|Shigella_flexneri_2a_str._2457T|-|15275..18487|pic|S3178|serine 
protease precurser
Length=1070

 Score =  818 bits (3097),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 528/1090 (49%), Positives = 798/1090 (74%), Gaps = 40/1090 (3%)

Query  305   EDNDAPVFFNASSGAPLQWKFDSSTGTGSLKQGSDEYAMHGQKGSDLNAGKNLTFLGHNG  364
             +D DAPV F ++ G PL+W +D ++GTG+L QGS + +MHGQK++DLNAGKNL F G+NG
Sbjct  3     DDFDAPVDFVSGLG-PLNWTYDKTSGTGTLSQGSKNWTMHGQKDNDLNAGKNLVFSGQNG  61

Query  365   QIDLENSVTQGAGSLTFTDDYTVTTSNGSTWTGAGIIVDKDASVNWQVNGVKGDNLHKIG  424
              I L +SVTQGAG L F D YTV++ +G TWTGAGII DK+++V W+VNGV GDNLHK+G
Sbjct  62    AIILKDSVTQGAGYLEFKDSYTVSAESGKTWTGAGIITDKGTNVTWKVNGVAGDNLHKLG  121

Query  425   EGTLVVQGTGVNEGGLKVGDGTVVLNQQADSSGHVQAFSSVNIASGRPTVVLADNQQVNP  484
             EGTL ++GTGVN GGLK GDG VVLNQQAD++G++QAFSSVN+ASGRPTVVL+D +QVNP
Sbjct  122   EGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGNIQAFSSVNLASGRPTVVLGDARQVNP  181

Query  485   DNISWGYRGGVLDVNGNDLTFHKLNAADYGATLGNSSDKTANITLDYQTHPADVKVNEWS  544
             DNISWGYRGG LD+NGN +TF +L+AADYGA + N++++ +++ LD +++ ++V     +
Sbjct  182   DNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKSQLLLDLKAQDTNVSEPTIG  241

Query  545   S----SNRGTVGSLYIYNNPYTHTVDYFILKTSSYG---WFPTGQVSNEHWEYVGHDQNS  597
             +    +  GT G+LY  +        ++ILK++SYG   W   +     +WE+VG ++N 
Sbjct  242   NISPFGGTGTPGNLY--SMILNSQTRFYILKSASYGNTLW-GNSLNDPAQWEFVGMNKNK  298

Query  598   AQALLANRI----NNKGYLYHGKLLGNINFSNKATPGTTGALVMDGSANMS-GTFTQENG  652
             A   + +RI     ++  ++HG+L GN++ +    PG    ++ DGS N++ GT++Q++G
Sbjct  299   AVQTVKDRILAGRAKQPVIFHGQLTGNMDVAIPQVPGGR-KVIFDGSVNLPEGTLSQDSG  357

Query  653   RLTIQGHPVIHASTSQSIANTVSSLGDNSVLTQPTSFTQDDWENRTFSFGSLVLKDTDFG  712
              L +QGHPVIHAS S S                P S+ Q DWENR F+  +L LKD+DF 
Sbjct  358   TLIFQGHPVIHASISGS---------------APVSLNQKDWENRQFTMKTLSLKDADFH  402

Query  713   LGRNATLNTTIQADNSSVTLGDSRVFIDKKDGQGTAFTLEEGTSVATKDADKSVFNGTVN  772
             L+RNA+LN+ I++DNS +TLG  R F+DK+DG G     EEGTSV+    D+S ++G + 
Sbjct  403   LSRNASLNSDIKSDNSHITLGSDRAFVDKNDGTGNYVIPEEGTSVPDTVNDRSQYEGNIT  462

Query  773   LDNQSVLNINDIFNGGIQANNSTVNISSDSAIL-GNSTLTSTalnlnkganalaSQSFVS  831
             L+++S L+I   F GGI+A +S+V+I+S   +L + +++++++L ++ G++  A +++ S
Sbjct  463   LNHNSALDIGSRFTGGIDAYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLTALNGLFS  522

Query  832   DGPVNIS-DATLSLNSRP--DEVSHTLLPVYDYAGSWNLKGDDARLNVGPYSMLSGNINV  888
             DG ++ + ++ ++L++ P  D  ++   +VY  +++ +L GD+A L++   +  SG+I+ 
Sbjct  523   DGHIQAGKNGKITLSGTPVKDTANQYAPAVY-LTDGYDLTGDNAALEITRGAHASGDIHA  581

Query  889   QDKGTVTLGGE--GELSPDLTLQNQMLYSLFNGYRNTWSGSLNAPDATVSMTDTQWSMNG  946
                +TVT+G++  +EL++  T  +    SL++GY  + +G++ +  A VSM ++ W++ G
Sbjct  582   SAASTVTIGSDTPAELASAETAASAFAGSLLEGYNAAFNGAITGGRADVSMHNALWTLGG  641

Query  947   NSTAGNMKLNRTIVGFNGGTSSFTTLTTDNLDAVQSAFVMRTDLNKADKLVINKSATGHD  1006
             +S+  ++ +  + ++ + G  +F TLT ++LDA  S FV+RTDL++ADK+ +   ATG D
Sbjct  642   DSAIHSLTVRNSRIS-SEGDRTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGSD  700

Query  1007  NSIWVNFLKKPSDKDTLDIPLVSAPEATADNLFRASTRVVGFSDVTPTLSVRKEDGKKEW  1066
             NS+ V+F+++P++ ++L+IPLV+AP +T+ ++F+A+TRV GFS VTPTL V   +G+  W
Sbjct  701   NSLNVSFMNNPAQGQALNIPLVTAPAGTSAEMFKAGTRVTGFSRVTPTLHVDTSGGNTKW  760

Query  1067  VLDGYQVARNDGQGKAAATFMHISYNNFITEVNNLNKRMGDLRDINGEAGTWVRLLNGSG  1126
             +LDG++   + + +  A +FM+ +Y+NF+TEVNNLNKRMGDLRD NG+AG+W R+++G+G
Sbjct  761   ILDGFKAEADKAAAAKADSFMNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMSGAG  820

Query  1127  SADGGFTDHYTLLQMGADRKHELGSMDLFTGVMATYTDTDASAGLYSGKTKSWGGGFYAS  1186
             SADGG++D+YT +Q+G D+KHEL+++DLFTGV  TYTD+ A +  +SGKTKS GGG+YAS
Sbjct  821   SADGGYSDNYTHVQVGFDKKHELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYAS  880

Query  1187  GLFRSGAYFDLIAKYIHNENKYDLNFAGAGKQNFRSHSLYAGAEVGYRYHLTDTTFVEPQ  1246
             +LF SGAY+DLI+KYIH++N Y  NFA+ G +++ +HS YAGAE GYRYHLT+ TF+EPQ
Sbjct  881   ALFESGAYIDLIGKYIHHDNDYTGNFASLGTKHYNTHSWYAGAETGYRYHLTEDTFIEPQ  940

Query  1247  AELVWGRLQGQTFNWNDSGMDVSMRRNSVNPLVGRTGVVSGKTFSGKDWSLTARAGLHYE  1306
             AELV G + G+TF W+D++MD+SM+    +PLVGRTGV  GKTFSGKDWS+TARAG   +
Sbjct  941   AELVYGAVSGKTFRWKDGDMDLSMKNRDFSPLVGRTGVELGKTFSGKDWSVTARAGTSWQ  1000

Query  1307  FDLTDSADVHLKDAAGEHQINGRKDGRMLYGVGLNARFGDNTRLGLEVERSAFGKYNTDD  1366
             FDL ++++  L+DA+GE +I+G KD+RML+ VG+NA++ DN R+GLE E+SAFGKYN D+
Sbjct  1001  FDLLNNGETVLRDASGEKRIKGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNVDN  1060

Query  1367  AINANIRYSF  1376
             A+NAN+RY F
Sbjct  1061  AVNANFRYMF  1070

39) tsh in NC_009837


> NC_004741_P1|8|G6|30064293|NP_838464.1|Shigella_flexneri_2a_str._2457T|-|15275..18487|pic|S3178|serine 
protease precurser
Length=1070

 Score =  783 bits (2964),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 530/1091 (49%), Positives = 802/1091 (74%), Gaps = 40/1091 (3%)

Query  305   NEDNDAPVTFRTSEGGALEWSFNSStgagaltqgtttyaMHGQQGNDLNAGKNLIFQGQN  364
             ++D DAPV F  S  G+L+W+++ ++G+G+L+QG+   +MHGQ++NDLNAGKNL+F GQN
Sbjct  2     QDDFDAPVDF-VSGLGPLNWTYDKTSGTGTLSQGSKNWTMHGQKDNDLNAGKNLVFSGQN  60

Query  365   GQINLKDSVSQGAGSLTFRDNYTVTTSNGSTWTGAGIVVDNGVSVNWQVNGVKGDNLHKI  424
             G I LKDSV+QGAG L F+D+YTV++ +G TWTGAGI+ D+G +V W+VNGV GDNLHK+
Sbjct  61    GAIILKDSVTQGAGYLEFKDSYTVSAESGKTWTGAGIITDKGTNVTWKVNGVAGDNLHKL  120

Query  425   GEGTLTVQGTGINEgglkvgdgkvvlNQQADNKGQVQAFSSVNIASGRPTVVLTDERQVN  484
             GEGTLT++GTG+N GGLK GDG VVLNQQAD  G++QAFSSVN+ASGRPTVVL D RQVN
Sbjct  121   GEGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGNIQAFSSVNLASGRPTVVLGDARQVN  180

Query  485   PDTVSWGYRGGTLDVNGNSLTFHQLKAADYGAVLANNVDKRATITLDYALRADKVALNGW  544
             PD +SWGYRGG LD+NGN++TF +L+AADYGAV++NN ++++ + LD   +  +V+    
Sbjct  181   PDNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKSQLLLDLKAQDTNVSEPTI  240

Query  545   SE----SGKGTAGNLYKYNNPYTNTTDYFILKQSTYG--YFPTDQSSNATWEFVGHSQGD  598
             ++    +G GT+GNLY  +    + T ++ILK ++YG        +  A WEFVG ++  
Sbjct  241   GNISPFGGTGTPGNLY--SMILNSQTRFYILKSASYGNTLWGNSLNDPAQWEFVGMNKNK  298

Query  599   AQKLVADRF----NTAGYLFHGQLKGNLNVDNRLPEGVTG-ALVMDGAADIS-GTFTQEN  652
             A + V DR+         +FHGQL GN++V   +P+   G  ++ DG+ +++ GT++Q++
Sbjct  299   AVQTVKDRILAGRAKQPVIFHGQLTGNMDVA--IPQVPGGRKVIFDGSVNLPEGTLSQDS  356

Query  653   GRLTLQGHPVIHAYNTQSVADKLAASGDHSVLTQPTSFSQEDWENRSFTFDRLSLKNTDF  712
             G L +QGHPVIHA    S+++           + P S++Q DWENR FT   LSLK++DF
Sbjct  357   GTLIFQGHPVIHA----SISG-----------SAPVSLNQKDWENRQFTMKTLSLKDADF  401

Query  713   GLGRNATLNTTIQADNSSVTLGDSRVFIDKNDGQGTAFTLEEGTSVATKDADKSVFNGTV  772
              L+RNA+LN+ I++DNS +TLG  R F+DKNDG G     EEGTSV+    D+S ++G +
Sbjct  402   HLSRNASLNSDIKSDNSHITLGSDRAFVDKNDGTGNYVIPEEGTSVPDTVNDRSQYEGNI  461

Query  773   NLDNQSVLNINDIFNGGIQANNSTVNISSDSAVL-GNSTLTSTalnlnkganalaSQSFV  831
              L+++S L+I   F GGI+A +S+V+I+S   +L + +++++++L ++ G++  A +++ 
Sbjct  462   TLNHNSALDIGSRFTGGIDAYDSAVSITSPDVLLTAPGAFAGSSLTVHDGGHLTALNGLF  521

Query  832   SDGPVNIS-DATLSLNSRP--DEVSHTLLPVYDYAGSWNLKGDDARLNVGPYSMLSGNIN  888
             SDG ++ + ++ ++L++ P  D  ++   +VY  +++ +L GD+A L++   +  SG+I+
Sbjct  522   SDGHIQAGKNGKITLSGTPVKDTANQYAPAVY-LTDGYDLTGDNAALEITRGAHASGDIH  580

Query  889   VQDKGTVTLGGE--GELSPDLTLQNQMLYSLFNGYRNIWSGSLNAPDATVSMTDTQWSMN  946
                 +TVT+G++  +EL++  T  +    SL++GY    +G++ +  A VSM ++ W++ 
Sbjct  581   ASAASTVTIGSDTPAELASAETAASAFAGSLLEGYNAAFNGAITGGRADVSMHNALWTLG  640

Query  947   GNSTAGNMKLNRTIVGFNGGTSPFTTLTTDNLDAVQSAFVMRTDLNKADKLVINKSATGH  1006
             G+S+  ++ +  + ++ + G   F TLT ++LDA  S FV+RTDL++ADK+ +   ATG 
Sbjct  641   GDSAIHSLTVRNSRIS-SEGDRTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGS  699

Query  1007  DNSIWVNFLKKPSNKDTLDIPLVSAPEATADNLFRASTRVVGFSDVTPILSVRKEDGKKE  1066
             DNS+ V+F+++P++ ++L+IPLV+AP +T+ ++F+A+TRV GFS VTP L V   +G+  
Sbjct  700   DNSLNVSFMNNPAQGQALNIPLVTAPAGTSAEMFKAGTRVTGFSRVTPTLHVDTSGGNTK  759

Query  1067  WVLDGYQVARNDGQGKAAATFMHISYNNFITEVNNLNKRMGDLRDINGEAGTWVRLLNGS  1126
             W+LDG++   + + +  A +FM+ +Y+NF+TEVNNLNKRMGDLRD NG+AG+W R+++G+
Sbjct  760   WILDGFKAEADKAAAAKADSFMNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMSGA  819

Query  1127  GSADGGFTDHYTLLQMGADRKHELGSMDLFTGVMATYTDTDASADLYSGKTKSWGGGFYA  1186
             GSADGG++D+YT +Q+G D+KHEL+++DLFTGV  TYTD+ A ++ +SGKTKS GGG+YA
Sbjct  820   GSADGGYSDNYTHVQVGFDKKHELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYA  879

Query  1187  SGLFRSGAYFDVIAKYIHNENKYDLNFAGAGKQNFRSHSLYAGAEVGYRYHLTDTTFVEP  1246
             S+LF SGAY+D+I+KYIH++N Y  NFA+ G +++ +HS YAGAE GYRYHLT+ TF+EP
Sbjct  880   SALFESGAYIDLIGKYIHHDNDYTGNFASLGTKHYNTHSWYAGAETGYRYHLTEDTFIEP  939

Query  1247  QAELVWGRLQGQTFNWNDSGMDVSMRRNSVNPLVGRTGVVSGKTFSGKDWSLTARAGLHY  1306
             QAELV G + G+TF W+D++MD+SM+    +PLVGRTGV  GKTFSGKDWS+TARAG   
Sbjct  940   QAELVYGAVSGKTFRWKDGDMDLSMKNRDFSPLVGRTGVELGKTFSGKDWSVTARAGTSW  999

Query  1307  EFDLTDSADVHLKDAAGEHQINGRKDSRMLYGVGLNARFGDNTRLGLEVERSAFGKYNTD  1366
             +FDL ++++  L+DA+GE +I+G KDSRML+ VG+NA++ DN R+GLE E+SAFGKYN D
Sbjct  1000  QFDLLNNGETVLRDASGEKRIKGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNVD  1059

Query  1367  DAINANIRYSF  1377
             +A+NAN+RY F
Sbjct  1060  NAVNANFRYMF  1070

40) ECH74115_B0104 in NC_011350


> NC_004741_P1|8|G6|30064293|NP_838464.1|Shigella_flexneri_2a_str._2457T|-|15275..18487|pic|S3178|serine 
protease precurser
Length=1070

 Score =  636 bits (2405),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 442/1031 (43%), Positives = 686/1031 (67%), Gaps = 87/1031 (8%)

Query  345   KDLIFTG-GGDILLKSSFDNGAGGLVFNDKKTYRVNGDDF-TFKGAGVDTRNGSTVEWNI  402
             K+L+F+G  G I+LK S  +GAG L F  K +Y V+++   T  GAG+ T +G+ V W++
Sbjct  52    KNLVFSGQNGAIILKDSVTQGAGYLEF--KDSYTVSAESGKTWTGAGIITDKGTNVTWKV  109

Query  403   RYDNKDNLHKIGDGTLDVRKT--QNTNLKTGEGLVILGAE-------KTFNNIYITSGDG  453
                  DNLHK+G+GTL +  T  +   LKTG+G+V+L  +       ++F+++ ++SG  
Sbjct  110   NGVAGDNLHKLGEGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGNIQAFSSVNLASGRP  169

Query  454   TVRLNAENALSGGEYNGIFFAKNGGTLDLNGYNQSFNKIAATDSGAVITNTSTKKS--IL  511
             TV L     ++    + I  +  GG LDLNG   +F ++ A+D GAVITN + +KS  +L
Sbjct  170   TVVLGDARQVNP---DNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKSQLLL  226

Query  512   SLNNTADYIYHGNINGNLDVLQHHETKKENRRLILDGGV------DTTNDISLRNTQLS-  564
              L+     + +  I GN+  +    T  +   +IL++         ++ + +L+   L+ 
Sbjct  227   DLKAQDTNVSEPTI-GNISPFGGTGTPGNLYSMILNSQTRFYILKSASYGNTLWGNSLND  285

Query  565   ----------------------MQGHATEHAIYRDGAFSCSLPAPMRFLCGSD---YVAG  599
                                   + G+A +  I++ G ++ ++  ++  + G+    + ++
Sbjct  286   PAQWEFVGMNKNKAVQTVKDRILAGRAKQPVIFH-GQLTGNMDVAIPQVPGGRKVIFDGS  344

Query  600   MQNTEADAVKQNGN-AYKTNNAVSD---------LSQPDWETGTFRFGTLHLENSDFSVG  649
             ++  E+   +++G   ++ +  +           L+Q DWE   F   TL L ++DF ++
Sbjct  345   VNLPEGTLSQDSGTLIFQGHPVIHASISGSAPVSLNQKDWENRQFTMKTLSLKDADFHLS  404

Query  650   RNANVIGDIQASKSNITIGDTTAYIDLHAGKN---ITGDGFGFRQNIV-RGNSQGE-TL-  703
             RNA++ +DI++ +S+IT+G   A++D + G     I  +G +  + +  R++ +G+ TL 
Sbjct  405   RNASLNSDIKSDNSHITLGSDRAFVDKNDGTGNYVIPEEGTSVPDTVNDRSQYEGNITLN  464

Query  704   ----------FTGGITAEDSTIVIKDKAKALFSNYVYLLNTKATIENGADVTTQSGMFST  753
                       FTGGI A DS++ I   +  L++    +  +  T+++G+++T+ +G+FS 
Sbjct  465   HNSALDIGSRFTGGIDAYDSAVSITS-PDVLLTAPGAFAGSSLTVHDGGHLTALNGLFSD  523

Query  754   SDISIS--GNLSMTGNPDKD--NKFEPSIYLNDASYLLTDDSARLVAKNKASVVGDIHST  809
             ++I  +  G+++++G P KD  N++ P++YL D+ Y LT+D+A L     A   GDIH++
Sbjct  524   GHIQAGKNGKITLSGTPVKDTANQYAPAVYLTDG-YDLTGDNAALEITRGAHASGDIHAS  582

Query  810   KSASIMFGHDESDLSQLSDRTSKGLALGLLGGFDVSYRGSVNAPSASATMNNTWWQLTGD  869
              ++++ +G D +     ++ ++ ++A +LL G++ ++ G++ +  A  +M+N+ W L GD
Sbjct  583   AASTVTIGSDTPAELASAETAASAFAGSLLEGYNAAFNGAITGGRADVSMHNALWTLGGD  642

Query  870   SALKTLKSTNSMVYFTDSANNKKFHTLTVDELATSNSAYAMRTNLSESDKLEVKKHLSGE  929
             SA+ +L   NS +    S  ++ F+TLTV+ L ++ S + +RT+L ++DK++V    +G 
Sbjct  643   SAIHSLTVRNSRI---SSEGDRTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGS  699

Query  930   NNILLVDFLQKPTPEKQLNIELVSAPKDTNENVFKASKQTIGFSDVTPVITTRETDDKIT  989
             +N L V F+++P+  + LNI LV+AP +T+ ++FKA+ +  GFS VTP +    ++++  
Sbjct  700   DNSLNVSFMNNPAQGQALNIPLVTAPAGTSAEMFKAGTRVTGFSRVTPTLHVDTSGGNTK  759

Query  990   WSLTGYNTVANKEATRNAAALFSVDYKAFLNEVNNLNKRMGDLRDINGEAGAWARIMSGT  1049
             W L G+++ A+K A+ +A ++ + +YK F+ EVNNLNKRMGDLRD NG+AGAWARIMSG+
Sbjct  760   WILDGFKAEADKAAAAKADSFMNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMSGA  819

Query  1050  GSASGGFSDNYTHVQVGVDKKHELDGLDLFTGFTVTHTDSSASADVFSGKTKSVGAGLYA  1109
             GSA GG+SDNYTHVQVG DKKHELDG+DLFTG T+T TDSSA ++ FSGKTKSVG+GLYA
Sbjct  820   GSADGGYSDNYTHVQVGFDKKHELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYA  879

Query  1110  SAMFDSGAYIDLIGKYVHHDNEYTATFAGLGTRDYSTHSWYAGAEAGYRYHVTEDAWIEP  1169
             SA+F+SGAYIDLIGKY+HHDN+YT+ FA+LGT++Y+THSWYAGAE+GYRYH+TED+ IEP
Sbjct  880   SALFESGAYIDLIGKYIHHDNDYTGNFASLGTKHYNTHSWYAGAETGYRYHLTEDTFIEP  939

Query  1170  QAELVYGSVSGKQFAWKDQGMHLSMKDKDYNPLIGRTGVDVGKSFSGKDWKVTARAGLGY  1229
             QAELVYG+VSGK F WKD +M+LSMK++D++PL+GRTGV++GK+FSGKDW VTARAG + 
Sbjct  940   QAELVYGAVSGKTFRWKDGDMDLSMKNRDFSPLVGRTGVELGKTFSGKDWSVTARAGTSW  999

Query  1230  QFDLLANGETVLRDASGEKRIKGEKDSRMLMSVGLNAEIRDNVRFGLEFEKSAFGKYNVD  1289
             QFDLL NGETVLRDASGEKRIKGEKDSRML +VG+NA+I+DN+RFGLEFEKSAFGKYNVD
Sbjct  1000  QFDLLNNGETVLRDASGEKRIKGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNVD  1059

Query  1290  NAVNANFRYSF  1300
             NAVNANFRY F
Sbjct  1060  NAVNANFRYMF  1070

41) espP in NC_007414


> NC_004741_P1|8|G6|30064293|NP_838464.1|Shigella_flexneri_2a_str._2457T|-|15275..18487|pic|S3178|serine 
protease precurser
Length=1070

 Score =  636 bits (2405),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 442/1031 (43%), Positives = 686/1031 (67%), Gaps = 87/1031 (8%)

Query  345   KDLIFTG-GGDILLKSSFDNGAGGLVFNDKKTYRVNGDDF-TFKGAGVDTRNGSTVEWNI  402
             K+L+F+G  G I+LK S  +GAG L F  K +Y V+++   T  GAG+ T +G+ V W++
Sbjct  52    KNLVFSGQNGAIILKDSVTQGAGYLEF--KDSYTVSAESGKTWTGAGIITDKGTNVTWKV  109

Query  403   RYDNKDNLHKIGDGTLDVRKT--QNTNLKTGEGLVILGAE-------KTFNNIYITSGDG  453
                  DNLHK+G+GTL +  T  +   LKTG+G+V+L  +       ++F+++ ++SG  
Sbjct  110   NGVAGDNLHKLGEGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGNIQAFSSVNLASGRP  169

Query  454   TVRLNAENALSGGEYNGIFFAKNGGTLDLNGYNQSFNKIAATDSGAVITNTSTKKS--IL  511
             TV L     ++    + I  +  GG LDLNG   +F ++ A+D GAVITN + +KS  +L
Sbjct  170   TVVLGDARQVNP---DNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKSQLLL  226

Query  512   SLNNTADYIYHGNINGNLDVLQHHETKKENRRLILDGGV------DTTNDISLRNTQLS-  564
              L+     + +  I GN+  +    T  +   +IL++         ++ + +L+   L+ 
Sbjct  227   DLKAQDTNVSEPTI-GNISPFGGTGTPGNLYSMILNSQTRFYILKSASYGNTLWGNSLND  285

Query  565   ----------------------MQGHATEHAIYRDGAFSCSLPAPMRFLCGSD---YVAG  599
                                   + G+A +  I++ G ++ ++  ++  + G+    + ++
Sbjct  286   PAQWEFVGMNKNKAVQTVKDRILAGRAKQPVIFH-GQLTGNMDVAIPQVPGGRKVIFDGS  344

Query  600   MQNTEADAVKQNGN-AYKTNNAVSD---------LSQPDWETGTFRFGTLHLENSDFSVG  649
             ++  E+   +++G   ++ +  +           L+Q DWE   F   TL L ++DF ++
Sbjct  345   VNLPEGTLSQDSGTLIFQGHPVIHASISGSAPVSLNQKDWENRQFTMKTLSLKDADFHLS  404

Query  650   RNANVIGDIQASKSNITIGDTTAYIDLHAGKN---ITGDGFGFRQNIV-RGNSQGE-TL-  703
             RNA++ +DI++ +S+IT+G   A++D + G     I  +G +  + +  R++ +G+ TL 
Sbjct  405   RNASLNSDIKSDNSHITLGSDRAFVDKNDGTGNYVIPEEGTSVPDTVNDRSQYEGNITLN  464

Query  704   ----------FTGGITAEDSTIVIKDKAKALFSNYVYLLNTKATIENGADVTTQSGMFST  753
                       FTGGI A DS++ I   +  L++    +  +  T+++G+++T+ +G+FS 
Sbjct  465   HNSALDIGSRFTGGIDAYDSAVSITS-PDVLLTAPGAFAGSSLTVHDGGHLTALNGLFSD  523

Query  754   SDISIS--GNLSMTGNPDKD--NKFEPSIYLNDASYLLTDDSARLVAKNKASVVGDIHST  809
             ++I  +  G+++++G P KD  N++ P++YL D+ Y LT+D+A L     A   GDIH++
Sbjct  524   GHIQAGKNGKITLSGTPVKDTANQYAPAVYLTDG-YDLTGDNAALEITRGAHASGDIHAS  582

Query  810   KSASIMFGHDESDLSQLSDRTSKGLALGLLGGFDVSYRGSVNAPSASATMNNTWWQLTGD  869
              ++++ +G D +     ++ ++ ++A +LL G++ ++ G++ +  A  +M+N+ W L GD
Sbjct  583   AASTVTIGSDTPAELASAETAASAFAGSLLEGYNAAFNGAITGGRADVSMHNALWTLGGD  642

Query  870   SALKTLKSTNSMVYFTDSANNKKFHTLTVDELATSNSAYAMRTNLSESDKLEVKKHLSGE  929
             SA+ +L   NS +    S  ++ F+TLTV+ L ++ S + +RT+L ++DK++V    +G 
Sbjct  643   SAIHSLTVRNSRI---SSEGDRTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGS  699

Query  930   NNILLVDFLQKPTPEKQLNIELVSAPKDTNENVFKASKQTIGFSDVTPVITTRETDDKIT  989
             +N L V F+++P+  + LNI LV+AP +T+ ++FKA+ +  GFS VTP +    ++++  
Sbjct  700   DNSLNVSFMNNPAQGQALNIPLVTAPAGTSAEMFKAGTRVTGFSRVTPTLHVDTSGGNTK  759

Query  990   WSLTGYNTVANKEATRNAAALFSVDYKAFLNEVNNLNKRMGDLRDINGEAGAWARIMSGT  1049
             W L G+++ A+K A+ +A ++ + +YK F+ EVNNLNKRMGDLRD NG+AGAWARIMSG+
Sbjct  760   WILDGFKAEADKAAAAKADSFMNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMSGA  819

Query  1050  GSASGGFSDNYTHVQVGVDKKHELDGLDLFTGFTVTHTDSSASADVFSGKTKSVGAGLYA  1109
             GSA GG+SDNYTHVQVG DKKHELDG+DLFTG T+T TDSSA ++ FSGKTKSVG+GLYA
Sbjct  820   GSADGGYSDNYTHVQVGFDKKHELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYA  879

Query  1110  SAMFDSGAYIDLIGKYVHHDNEYTATFAGLGTRDYSTHSWYAGAEAGYRYHVTEDAWIEP  1169
             SA+F+SGAYIDLIGKY+HHDN+YT+ FA+LGT++Y+THSWYAGAE+GYRYH+TED+ IEP
Sbjct  880   SALFESGAYIDLIGKYIHHDNDYTGNFASLGTKHYNTHSWYAGAETGYRYHLTEDTFIEP  939

Query  1170  QAELVYGSVSGKQFAWKDQGMHLSMKDKDYNPLIGRTGVDVGKSFSGKDWKVTARAGLGY  1229
             QAELVYG+VSGK F WKD +M+LSMK++D++PL+GRTGV++GK+FSGKDW VTARAG + 
Sbjct  940   QAELVYGAVSGKTFRWKDGDMDLSMKNRDFSPLVGRTGVELGKTFSGKDWSVTARAGTSW  999

Query  1230  QFDLLANGETVLRDASGEKRIKGEKDSRMLMSVGLNAEIRDNVRFGLEFEKSAFGKYNVD  1289
             QFDLL NGETVLRDASGEKRIKGEKDSRML +VG+NA+I+DN+RFGLEFEKSAFGKYNVD
Sbjct  1000  QFDLLNNGETVLRDASGEKRIKGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNVD  1059

Query  1290  NAVNANFRYSF  1300
             NAVNANFRY F
Sbjct  1060  NAVNANFRYMF  1070

42) espP in NC_002128


> NC_004741_P1|8|G6|30064293|NP_838464.1|Shigella_flexneri_2a_str._2457T|-|15275..18487|pic|S3178|serine 
protease precurser
Length=1070

 Score =  636 bits (2405),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 442/1031 (43%), Positives = 686/1031 (67%), Gaps = 87/1031 (8%)

Query  345   KDLIFTG-GGDILLKSSFDNGAGGLVFNDKKTYRVNGDDF-TFKGAGVDTRNGSTVEWNI  402
             K+L+F+G  G I+LK S  +GAG L F  K +Y V+++   T  GAG+ T +G+ V W++
Sbjct  52    KNLVFSGQNGAIILKDSVTQGAGYLEF--KDSYTVSAESGKTWTGAGIITDKGTNVTWKV  109

Query  403   RYDNKDNLHKIGDGTLDVRKT--QNTNLKTGEGLVILGAE-------KTFNNIYITSGDG  453
                  DNLHK+G+GTL +  T  +   LKTG+G+V+L  +       ++F+++ ++SG  
Sbjct  110   NGVAGDNLHKLGEGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGNIQAFSSVNLASGRP  169

Query  454   TVRLNAENALSGGEYNGIFFAKNGGTLDLNGYNQSFNKIAATDSGAVITNTSTKKS--IL  511
             TV L     ++    + I  +  GG LDLNG   +F ++ A+D GAVITN + +KS  +L
Sbjct  170   TVVLGDARQVNP---DNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKSQLLL  226

Query  512   SLNNTADYIYHGNINGNLDVLQHHETKKENRRLILDGGV------DTTNDISLRNTQLS-  564
              L+     + +  I GN+  +    T  +   +IL++         ++ + +L+   L+ 
Sbjct  227   DLKAQDTNVSEPTI-GNISPFGGTGTPGNLYSMILNSQTRFYILKSASYGNTLWGNSLND  285

Query  565   ----------------------MQGHATEHAIYRDGAFSCSLPAPMRFLCGSD---YVAG  599
                                   + G+A +  I++ G ++ ++  ++  + G+    + ++
Sbjct  286   PAQWEFVGMNKNKAVQTVKDRILAGRAKQPVIFH-GQLTGNMDVAIPQVPGGRKVIFDGS  344

Query  600   MQNTEADAVKQNGN-AYKTNNAVSD---------LSQPDWETGTFRFGTLHLENSDFSVG  649
             ++  E+   +++G   ++ +  +           L+Q DWE   F   TL L ++DF ++
Sbjct  345   VNLPEGTLSQDSGTLIFQGHPVIHASISGSAPVSLNQKDWENRQFTMKTLSLKDADFHLS  404

Query  650   RNANVIGDIQASKSNITIGDTTAYIDLHAGKN---ITGDGFGFRQNIV-RGNSQGE-TL-  703
             RNA++ +DI++ +S+IT+G   A++D + G     I  +G +  + +  R++ +G+ TL 
Sbjct  405   RNASLNSDIKSDNSHITLGSDRAFVDKNDGTGNYVIPEEGTSVPDTVNDRSQYEGNITLN  464

Query  704   ----------FTGGITAEDSTIVIKDKAKALFSNYVYLLNTKATIENGADVTTQSGMFST  753
                       FTGGI A DS++ I   +  L++    +  +  T+++G+++T+ +G+FS 
Sbjct  465   HNSALDIGSRFTGGIDAYDSAVSITS-PDVLLTAPGAFAGSSLTVHDGGHLTALNGLFSD  523

Query  754   SDISIS--GNLSMTGNPDKD--NKFEPSIYLNDASYLLTDDSARLVAKNKASVVGDIHST  809
             ++I  +  G+++++G P KD  N++ P++YL D+ Y LT+D+A L     A   GDIH++
Sbjct  524   GHIQAGKNGKITLSGTPVKDTANQYAPAVYLTDG-YDLTGDNAALEITRGAHASGDIHAS  582

Query  810   KSASIMFGHDESDLSQLSDRTSKGLALGLLGGFDVSYRGSVNAPSASATMNNTWWQLTGD  869
              ++++ +G D +     ++ ++ ++A +LL G++ ++ G++ +  A  +M+N+ W L GD
Sbjct  583   AASTVTIGSDTPAELASAETAASAFAGSLLEGYNAAFNGAITGGRADVSMHNALWTLGGD  642

Query  870   SALKTLKSTNSMVYFTDSANNKKFHTLTVDELATSNSAYAMRTNLSESDKLEVKKHLSGE  929
             SA+ +L   NS +    S  ++ F+TLTV+ L ++ S + +RT+L ++DK++V    +G 
Sbjct  643   SAIHSLTVRNSRI---SSEGDRTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGS  699

Query  930   NNILLVDFLQKPTPEKQLNIELVSAPKDTNENVFKASKQTIGFSDVTPVITTRETDDKIT  989
             +N L V F+++P+  + LNI LV+AP +T+ ++FKA+ +  GFS VTP +    ++++  
Sbjct  700   DNSLNVSFMNNPAQGQALNIPLVTAPAGTSAEMFKAGTRVTGFSRVTPTLHVDTSGGNTK  759

Query  990   WSLTGYNTVANKEATRNAAALFSVDYKAFLNEVNNLNKRMGDLRDINGEAGAWARIMSGT  1049
             W L G+++ A+K A+ +A ++ + +YK F+ EVNNLNKRMGDLRD NG+AGAWARIMSG+
Sbjct  760   WILDGFKAEADKAAAAKADSFMNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMSGA  819

Query  1050  GSASGGFSDNYTHVQVGVDKKHELDGLDLFTGFTVTHTDSSASADVFSGKTKSVGAGLYA  1109
             GSA GG+SDNYTHVQVG DKKHELDG+DLFTG T+T TDSSA ++ FSGKTKSVG+GLYA
Sbjct  820   GSADGGYSDNYTHVQVGFDKKHELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYA  879

Query  1110  SAMFDSGAYIDLIGKYVHHDNEYTATFAGLGTRDYSTHSWYAGAEAGYRYHVTEDAWIEP  1169
             SA+F+SGAYIDLIGKY+HHDN+YT+ FA+LGT++Y+THSWYAGAE+GYRYH+TED+ IEP
Sbjct  880   SALFESGAYIDLIGKYIHHDNDYTGNFASLGTKHYNTHSWYAGAETGYRYHLTEDTFIEP  939

Query  1170  QAELVYGSVSGKQFAWKDQGMHLSMKDKDYNPLIGRTGVDVGKSFSGKDWKVTARAGLGY  1229
             QAELVYG+VSGK F WKD +M+LSMK++D++PL+GRTGV++GK+FSGKDW VTARAG + 
Sbjct  940   QAELVYGAVSGKTFRWKDGDMDLSMKNRDFSPLVGRTGVELGKTFSGKDWSVTARAGTSW  999

Query  1230  QFDLLANGETVLRDASGEKRIKGEKDSRMLMSVGLNAEIRDNVRFGLEFEKSAFGKYNVD  1289
             QFDLL NGETVLRDASGEKRIKGEKDSRML +VG+NA+I+DN+RFGLEFEKSAFGKYNVD
Sbjct  1000  QFDLLNNGETVLRDASGEKRIKGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNVD  1059

Query  1290  NAVNANFRYSF  1300
             NAVNANFRY F
Sbjct  1060  NAVNANFRYMF  1070

43) espP in NC_013010


> NC_004741_P1|8|G6|30064293|NP_838464.1|Shigella_flexneri_2a_str._2457T|-|15275..18487|pic|S3178|serine 
protease precurser
Length=1070

 Score =  636 bits (2405),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 442/1031 (43%), Positives = 686/1031 (67%), Gaps = 87/1031 (8%)

Query  345   KDLIFTG-GGDILLKSSFDNGAGGLVFNDKKTYRVNGDDF-TFKGAGVDTRNGSTVEWNI  402
             K+L+F+G  G I+LK S  +GAG L F  K +Y V+++   T  GAG+ T +G+ V W++
Sbjct  52    KNLVFSGQNGAIILKDSVTQGAGYLEF--KDSYTVSAESGKTWTGAGIITDKGTNVTWKV  109

Query  403   RYDNKDNLHKIGDGTLDVRKT--QNTNLKTGEGLVILGAE-------KTFNNIYITSGDG  453
                  DNLHK+G+GTL +  T  +   LKTG+G+V+L  +       ++F+++ ++SG  
Sbjct  110   NGVAGDNLHKLGEGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGNIQAFSSVNLASGRP  169

Query  454   TVRLNAENALSGGEYNGIFFAKNGGTLDLNGYNQSFNKIAATDSGAVITNTSTKKS--IL  511
             TV L     ++    + I  +  GG LDLNG   +F ++ A+D GAVITN + +KS  +L
Sbjct  170   TVVLGDARQVNP---DNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKSQLLL  226

Query  512   SLNNTADYIYHGNINGNLDVLQHHETKKENRRLILDGGV------DTTNDISLRNTQLS-  564
              L+     + +  I GN+  +    T  +   +IL++         ++ + +L+   L+ 
Sbjct  227   DLKAQDTNVSEPTI-GNISPFGGTGTPGNLYSMILNSQTRFYILKSASYGNTLWGNSLND  285

Query  565   ----------------------MQGHATEHAIYRDGAFSCSLPAPMRFLCGSD---YVAG  599
                                   + G+A +  I++ G ++ ++  ++  + G+    + ++
Sbjct  286   PAQWEFVGMNKNKAVQTVKDRILAGRAKQPVIFH-GQLTGNMDVAIPQVPGGRKVIFDGS  344

Query  600   MQNTEADAVKQNGN-AYKTNNAVSD---------LSQPDWETGTFRFGTLHLENSDFSVG  649
             ++  E+   +++G   ++ +  +           L+Q DWE   F   TL L ++DF ++
Sbjct  345   VNLPEGTLSQDSGTLIFQGHPVIHASISGSAPVSLNQKDWENRQFTMKTLSLKDADFHLS  404

Query  650   RNANVIGDIQASKSNITIGDTTAYIDLHAGKN---ITGDGFGFRQNIV-RGNSQGE-TL-  703
             RNA++ +DI++ +S+IT+G   A++D + G     I  +G +  + +  R++ +G+ TL 
Sbjct  405   RNASLNSDIKSDNSHITLGSDRAFVDKNDGTGNYVIPEEGTSVPDTVNDRSQYEGNITLN  464

Query  704   ----------FTGGITAEDSTIVIKDKAKALFSNYVYLLNTKATIENGADVTTQSGMFST  753
                       FTGGI A DS++ I   +  L++    +  +  T+++G+++T+ +G+FS 
Sbjct  465   HNSALDIGSRFTGGIDAYDSAVSITS-PDVLLTAPGAFAGSSLTVHDGGHLTALNGLFSD  523

Query  754   SDISIS--GNLSMTGNPDKD--NKFEPSIYLNDASYLLTDDSARLVAKNKASVVGDIHST  809
             ++I  +  G+++++G P KD  N++ P++YL D+ Y LT+D+A L     A   GDIH++
Sbjct  524   GHIQAGKNGKITLSGTPVKDTANQYAPAVYLTDG-YDLTGDNAALEITRGAHASGDIHAS  582

Query  810   KSASIMFGHDESDLSQLSDRTSKGLALGLLGGFDVSYRGSVNAPSASATMNNTWWQLTGD  869
              ++++ +G D +     ++ ++ ++A +LL G++ ++ G++ +  A  +M+N+ W L GD
Sbjct  583   AASTVTIGSDTPAELASAETAASAFAGSLLEGYNAAFNGAITGGRADVSMHNALWTLGGD  642

Query  870   SALKTLKSTNSMVYFTDSANNKKFHTLTVDELATSNSAYAMRTNLSESDKLEVKKHLSGE  929
             SA+ +L   NS +    S  ++ F+TLTV+ L ++ S + +RT+L ++DK++V    +G 
Sbjct  643   SAIHSLTVRNSRI---SSEGDRTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGS  699

Query  930   NNILLVDFLQKPTPEKQLNIELVSAPKDTNENVFKASKQTIGFSDVTPVITTRETDDKIT  989
             +N L V F+++P+  + LNI LV+AP +T+ ++FKA+ +  GFS VTP +    ++++  
Sbjct  700   DNSLNVSFMNNPAQGQALNIPLVTAPAGTSAEMFKAGTRVTGFSRVTPTLHVDTSGGNTK  759

Query  990   WSLTGYNTVANKEATRNAAALFSVDYKAFLNEVNNLNKRMGDLRDINGEAGAWARIMSGT  1049
             W L G+++ A+K A+ +A ++ + +YK F+ EVNNLNKRMGDLRD NG+AGAWARIMSG+
Sbjct  760   WILDGFKAEADKAAAAKADSFMNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMSGA  819

Query  1050  GSASGGFSDNYTHVQVGVDKKHELDGLDLFTGFTVTHTDSSASADVFSGKTKSVGAGLYA  1109
             GSA GG+SDNYTHVQVG DKKHELDG+DLFTG T+T TDSSA ++ FSGKTKSVG+GLYA
Sbjct  820   GSADGGYSDNYTHVQVGFDKKHELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYA  879

Query  1110  SAMFDSGAYIDLIGKYVHHDNEYTATFAGLGTRDYSTHSWYAGAEAGYRYHVTEDAWIEP  1169
             SA+F+SGAYIDLIGKY+HHDN+YT+ FA+LGT++Y+THSWYAGAE+GYRYH+TED+ IEP
Sbjct  880   SALFESGAYIDLIGKYIHHDNDYTGNFASLGTKHYNTHSWYAGAETGYRYHLTEDTFIEP  939

Query  1170  QAELVYGSVSGKQFAWKDQGMHLSMKDKDYNPLIGRTGVDVGKSFSGKDWKVTARAGLGY  1229
             QAELVYG+VSGK F WKD +M+LSMK++D++PL+GRTGV++GK+FSGKDW VTARAG + 
Sbjct  940   QAELVYGAVSGKTFRWKDGDMDLSMKNRDFSPLVGRTGVELGKTFSGKDWSVTARAGTSW  999

Query  1230  QFDLLANGETVLRDASGEKRIKGEKDSRMLMSVGLNAEIRDNVRFGLEFEKSAFGKYNVD  1289
             QFDLL NGETVLRDASGEKRIKGEKDSRML +VG+NA+I+DN+RFGLEFEKSAFGKYNVD
Sbjct  1000  QFDLLNNGETVLRDASGEKRIKGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNVD  1059

Query  1290  NAVNANFRYSF  1300
             NAVNANFRY F
Sbjct  1060  NAVNANFRYMF  1070

44) espP in NC_017907


> NC_004741_P1|8|G6|30064293|NP_838464.1|Shigella_flexneri_2a_str._2457T|-|15275..18487|pic|S3178|serine 
protease precurser
Length=1070

 Score =  636 bits (2405),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 442/1031 (43%), Positives = 686/1031 (67%), Gaps = 87/1031 (8%)

Query  345   KDLIFTG-GGDILLKSSFDNGAGGLVFNDKKTYRVNGDDF-TFKGAGVDTRNGSTVEWNI  402
             K+L+F+G  G I+LK S  +GAG L F  K +Y V+++   T  GAG+ T +G+ V W++
Sbjct  52    KNLVFSGQNGAIILKDSVTQGAGYLEF--KDSYTVSAESGKTWTGAGIITDKGTNVTWKV  109

Query  403   RYDNKDNLHKIGDGTLDVRKT--QNTNLKTGEGLVILGAE-------KTFNNIYITSGDG  453
                  DNLHK+G+GTL +  T  +   LKTG+G+V+L  +       ++F+++ ++SG  
Sbjct  110   NGVAGDNLHKLGEGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGNIQAFSSVNLASGRP  169

Query  454   TVRLNAENALSGGEYNGIFFAKNGGTLDLNGYNQSFNKIAATDSGAVITNTSTKKS--IL  511
             TV L     ++    + I  +  GG LDLNG   +F ++ A+D GAVITN + +KS  +L
Sbjct  170   TVVLGDARQVNP---DNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNNAQQKSQLLL  226

Query  512   SLNNTADYIYHGNINGNLDVLQHHETKKENRRLILDGGV------DTTNDISLRNTQLS-  564
              L+     + +  I GN+  +    T  +   +IL++         ++ + +L+   L+ 
Sbjct  227   DLKAQDTNVSEPTI-GNISPFGGTGTPGNLYSMILNSQTRFYILKSASYGNTLWGNSLND  285

Query  565   ----------------------MQGHATEHAIYRDGAFSCSLPAPMRFLCGSD---YVAG  599
                                   + G+A +  I++ G ++ ++  ++  + G+    + ++
Sbjct  286   PAQWEFVGMNKNKAVQTVKDRILAGRAKQPVIFH-GQLTGNMDVAIPQVPGGRKVIFDGS  344

Query  600   MQNTEADAVKQNGN-AYKTNNAVSD---------LSQPDWETGTFRFGTLHLENSDFSVG  649
             ++  E+   +++G   ++ +  +           L+Q DWE   F   TL L ++DF ++
Sbjct  345   VNLPEGTLSQDSGTLIFQGHPVIHASISGSAPVSLNQKDWENRQFTMKTLSLKDADFHLS  404

Query  650   RNANVIGDIQASKSNITIGDTTAYIDLHAGKN---ITGDGFGFRQNIV-RGNSQGE-TL-  703
             RNA++ +DI++ +S+IT+G   A++D + G     I  +G +  + +  R++ +G+ TL 
Sbjct  405   RNASLNSDIKSDNSHITLGSDRAFVDKNDGTGNYVIPEEGTSVPDTVNDRSQYEGNITLN  464

Query  704   ----------FTGGITAEDSTIVIKDKAKALFSNYVYLLNTKATIENGADVTTQSGMFST  753
                       FTGGI A DS++ I   +  L++    +  +  T+++G+++T+ +G+FS 
Sbjct  465   HNSALDIGSRFTGGIDAYDSAVSITS-PDVLLTAPGAFAGSSLTVHDGGHLTALNGLFSD  523

Query  754   SDISIS--GNLSMTGNPDKD--NKFEPSIYLNDASYLLTDDSARLVAKNKASVVGDIHST  809
             ++I  +  G+++++G P KD  N++ P++YL D+ Y LT+D+A L     A   GDIH++
Sbjct  524   GHIQAGKNGKITLSGTPVKDTANQYAPAVYLTDG-YDLTGDNAALEITRGAHASGDIHAS  582

Query  810   KSASIMFGHDESDLSQLSDRTSKGLALGLLGGFDVSYRGSVNAPSASATMNNTWWQLTGD  869
              ++++ +G D +     ++ ++ ++A +LL G++ ++ G++ +  A  +M+N+ W L GD
Sbjct  583   AASTVTIGSDTPAELASAETAASAFAGSLLEGYNAAFNGAITGGRADVSMHNALWTLGGD  642

Query  870   SALKTLKSTNSMVYFTDSANNKKFHTLTVDELATSNSAYAMRTNLSESDKLEVKKHLSGE  929
             SA+ +L   NS +    S  ++ F+TLTV+ L ++ S + +RT+L ++DK++V    +G 
Sbjct  643   SAIHSLTVRNSRI---SSEGDRTFRTLTVNKLDATGSDFVLRTDLKNADKINVTEKATGS  699

Query  930   NNILLVDFLQKPTPEKQLNIELVSAPKDTNENVFKASKQTIGFSDVTPVITTRETDDKIT  989
             +N L V F+++P+  + LNI LV+AP +T+ ++FKA+ +  GFS VTP +    ++++  
Sbjct  700   DNSLNVSFMNNPAQGQALNIPLVTAPAGTSAEMFKAGTRVTGFSRVTPTLHVDTSGGNTK  759

Query  990   WSLTGYNTVANKEATRNAAALFSVDYKAFLNEVNNLNKRMGDLRDINGEAGAWARIMSGT  1049
             W L G+++ A+K A+ +A ++ + +YK F+ EVNNLNKRMGDLRD NG+AGAWARIMSG+
Sbjct  760   WILDGFKAEADKAAAAKADSFMNAGYKNFMTEVNNLNKRMGDLRDTNGDAGAWARIMSGA  819

Query  1050  GSASGGFSDNYTHVQVGVDKKHELDGLDLFTGFTVTHTDSSASADVFSGKTKSVGAGLYA  1109
             GSA GG+SDNYTHVQVG DKKHELDG+DLFTG T+T TDSSA ++ FSGKTKSVG+GLYA
Sbjct  820   GSADGGYSDNYTHVQVGFDKKHELDGVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYA  879

Query  1110  SAMFDSGAYIDLIGKYVHHDNEYTATFAGLGTRDYSTHSWYAGAEAGYRYHVTEDAWIEP  1169
             SA+F+SGAYIDLIGKY+HHDN+YT+ FA+LGT++Y+THSWYAGAE+GYRYH+TED+ IEP
Sbjct  880   SALFESGAYIDLIGKYIHHDNDYTGNFASLGTKHYNTHSWYAGAETGYRYHLTEDTFIEP  939

Query  1170  QAELVYGSVSGKQFAWKDQGMHLSMKDKDYNPLIGRTGVDVGKSFSGKDWKVTARAGLGY  1229
             QAELVYG+VSGK F WKD +M+LSMK++D++PL+GRTGV++GK+FSGKDW VTARAG + 
Sbjct  940   QAELVYGAVSGKTFRWKDGDMDLSMKNRDFSPLVGRTGVELGKTFSGKDWSVTARAGTSW  999

Query  1230  QFDLLANGETVLRDASGEKRIKGEKDSRMLMSVGLNAEIRDNVRFGLEFEKSAFGKYNVD  1289
             QFDLL NGETVLRDASGEKRIKGEKDSRML +VG+NA+I+DN+RFGLEFEKSAFGKYNVD
Sbjct  1000  QFDLLNNGETVLRDASGEKRIKGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNVD  1059

Query  1290  NAVNANFRYSF  1300
             NAVNANFRY F
Sbjct  1060  NAVNANFRYMF  1070

45) pet in NC_017627


> NC_004741_P1|8|G6|30064293|NP_838464.1|Shigella_flexneri_2a_str._2457T|-|15275..18487|pic|S3178|serine 
protease precurser
Length=1070

 Score =  617 bits (2330),  Expect = 2e-177, Method: Compositional matrix adjust.
 Identities = 435/1045 (42%), Positives = 689/1045 (66%), Gaps = 103/1045 (9%)

Query  337   EKNKN-NQNKDLVFSG-GGKISLKENLDLGYGGFI-FDENKKYTVSAEGNNNVTFKGAGI  393
             +K+++ N  K+LVFSG  G I LK+++  G +G++ F ++  YTVSAE+ +  T  GAGI
Sbjct  43    QKDNDLNAGKNLVFSGQNGAIILKDSVTQG-AGYLEFKDS--YTVSAESGK--TWTGAGI  97

Query  394   DIGKGSTVDWNIKYASNDALHKI-------------------GEGSLNVIQAQNT-----  429
               +KG+ V W+++  + D LHK+                   G+G + + Q  +T     
Sbjct  98    ITDKGTNVTWKVNGVAGDNLHKLGEGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGNIQ  157

Query  430   -----NLKTGNGTVILGAQKTFNNIYVAGG--PGTVQLNAENA----LGEGDYAGIFFTE  478
                  NL +G  TV+LG  +  N   ++ G   G ++LN++      L  +DY++++  +
Sbjct  158   AFSSVNLASGRPTVVLGDARQVNPDNISWGYRGGKLDLNGNAVTFTRLQAADYGAVITNN  217

Query  479   NGGK----LDLNGHNQTFKKIAATDSGTTITNSNTTKESVLSVNNQNN-YIYHGNVDGNV  533
                K    LDL++++      +  + +     +   +   + +N+Q   YI  +   GN 
Sbjct  218   AQQKSQLLLDLKAQDTNVSEPTIGNISPFGGTGTPGNLYSMILNSQTRFYILKSASYGNT  277

Query  534   RLEHHLDTKQDNARLILDGDIQANSISIKNAPLVMQGHATDHAIFRTTKTNN----CPEF  589
                + L+   +   + ++ +   +++  +    ++ G+A +  IF+   T N     P+ 
Sbjct  278   LWGNSLNDPAQWEFVGMNKNKAVQTVKDR----ILAGRAKQPVIFHGQLTGNMDVAIPQV  333

Query  590   LCG--VDWVTRIKNAENSVNQKNKT-TYKSNNQVSD---------LSQPDWETRKFRFDN  637
               G  V     ++ +E +++Q + T  ++++  +           L+Q DWE R+F    
Sbjct  334   PGGRKVIFDGSVNLPEGTLSQDSGTLIFQGHPVIHASISGSAPVSLNQKDWENRQFTMKT  393

Query  638   LNIEDSSLSIARNADVEGNIQAKNSVINIGDKTAYIDLYSGKNITGAGFTFRQD-IKSGD  696
             L++ D+ + ++RNA ++++I++ NS I +G   A++D    KN   + + + ++     D
Sbjct  394   LSLKDADFHLSRNASLNSDIKSDNSHITLGSDRAFVD----KNDGTGNYVIPEEGTSVPD  449

Query  697   SIGE-------------------SKFTGGIMATDGSISIGDKAIVTLNTVSSLDRTALTI  737
             ++ +                   S+FTGGI A D+++SI    ++ L + +++  ++LT+
Sbjct  450   TVNDRSQYEGNITLNHNSALDIGSRFTGGIDAYDSAVSITSPDVL-LTAPGAFAGSSLTV  508

Query  738   HKGANVTASSSLFTTSNIKSG--GDLTLTGAT--ESTGEITPSMFYAAGGYELTEDGANF  793
             H G+++TA ++LF+ ++I++G  G +TL+G+   +++ + +P++ Y ++GY+LT D A +
Sbjct  509   HDGGHLTALNGLFSDGHIQAGKNGKITLSGTPVKDTANQYAPAV-YLTDGYDLTGDNAAL  567

Query  794   TAKNQASVTGDIKSEKAAKLSFGS---ADKDNSATRYSQFALAMLDGFDTSYQGSIKAAQ  850
                  A  +GDI +  A+ +++GS   A+  ++ T  S FA ++L+G++++++G+I +++
Sbjct  568   EITRGAHASGDIHASAASTVTIGSDTPAELASAETAASAFAGSLLEGYNAAFNGAITGGR  627

Query  851   SSLAMNNALWKVTGNSELKKLNSTGSMVLFNGGKNIFNTLTVDELTTSNSAFVMRTNTQQ  910
             + ++M+NALW + G+S +  L    S +  +G++  F TLTV+ L ++ S FV+RT+ ++
Sbjct  628   ADVSMHNALWTLGGDSAIHSLTVRNSRISSEGDRT-FRTLTVNKLDATGSDFVLRTDLKN  686

Query  911   ADQLIVKNKLEGANNLLLVDFIEKKGNDKNGLNIDLVKAPENTSKDVFKTETQTIGFSDV  970
             AD++ V +K  G++N L V F+++ ++++ +LNI LV AP  TS ++FK+ T+  GFS V
Sbjct  687   ADKINVTEKATGSDNSLNVSFMNNPAQGQ-ALNIPLVTAPAGTSAEMFKAGTRVTGFSRV  745

Query  971   TPEIKQQEKDGKSVWTLTGYKTVANADAAKKATSLMSGGYKAFLAEVNNLNKRMGDLRDI  1030
             TP +  +  +G++ W L G+K+ A+  AA KA S+M++GYK F++EVNNLNKRMGDLRD 
Sbjct  746   TPTLHVDTSGGNTKWILDGFKAEADKAAAAKADSFMNAGYKNFMTEVNNLNKRMGDLRDT  805

Query  1031  NGEAGAWARIMSGTGSAGGGFSDNYTHVQVGADNKHELDGLDLFTGVTMTYTDSHAGSDA  1090
             NG+AGAWARIMSG+GSA+GG+SDNYTHVQVG D+KHELDG+DLFTGVTMTYTDS A+S+A
Sbjct  806   NGDAGAWARIMSGAGSADGGYSDNYTHVQVGFDKKHELDGVDLFTGVTMTYTDSSADSHA  865

Query  1091  FSGETKSVGAGLYASAMFESGAYIDLIGKYVHHDNEYTATFAGLGTRDYSSHSWYAGAEV  1150
             FSG TKSVG+GLYASA+FESGAYIDLIGKY+HHDN+YT+ FA+LGT++Y++HSWYAGAE 
Sbjct  866   FSGKTKSVGGGLYASALFESGAYIDLIGKYIHHDNDYTGNFASLGTKHYNTHSWYAGAET  925

Query  1151  GYRYHVTDSAWIEPQAELVYGAVSGKQFSWKDQGMNLTMKDKDFNPLIGRTGVDVGKSFS  1210
             GYRYH+T+ + IEPQAELVYGAVSGK F WKD +M+L+MK++DF+PL+GRTGV++GK+FS
Sbjct  926   GYRYHLTEDTFIEPQAELVYGAVSGKTFRWKDGDMDLSMKNRDFSPLVGRTGVELGKTFS  985

Query  1211  GKDWKVTARAGLGYQFDLFANGETVLRDASGEKRIKGEKDGRMLMNVGLNAEIRDNVRFG  1270
             GKDW VTARAG + QFDL+ NGETVLRDASGEKRIKGEKD+RML NVG+NA+I+DN+RFG
Sbjct  986   GKDWSVTARAGTSWQFDLLNNGETVLRDASGEKRIKGEKDSRMLFNVGMNAQIKDNMRFG  1045

Query  1271  LEFEKSAFGKYNVDNAINANFRYSF  1295
             LEFEKSAFGKYNVDNA+NANFRY F
Sbjct  1046  LEFEKSAFGKYNVDNAVNANFRYMF  1070

46) EC55989_4682 in NC_011748


> NC_004741_P1|8|G6|30064293|NP_838464.1|Shigella_flexneri_2a_str._2457T|-|15275..18487|pic|S3178|serine 
protease precurser
Length=1070

 Score =  601 bits (2270),  Expect = 1e-172, Method: Compositional matrix adjust.
 Identities = 439/1047 (42%), Positives = 684/1047 (66%), Gaps = 92/1047 (8%)

Query  315   LDGKKQELSSIIKDKDLSVSG-GGVLTLKQDTDLGIGGLIFDKNQTYKVYG-KDKSYKGA  372
             ++G+K++   +  +K+L  SG  G + LK+    G G L F  +++Y V +  +K+  GA
Sbjct  40    MHGQKDN--DLNAGKNLVFSGQNGAIILKDSVTQGAGYLEF--KDSYTVSAESGKTWTGA  95

Query  373   GIDIDNNTTVEWNVKGVAGDNLHKIGSGTLDVKIA--QGNNLKIGNGTVILSAE------  424
             GI  D+ T V W+V+GVAGDNLHK+G GTL ++ +  +   LK G+G V+L+ +      
Sbjct  96    GIITDKGTNVTWKVNGVAGDNLHKLGEGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGN  155

Query  425   -KAFNKIYMAGGKGTVKINAKDALSESGNGEIYFTRNGGTLDLNGYDQSFQKIAATDAGT  483
              +AF+ + +A+G+ TV +       +   ++I     GG LDLNG   +F ++ A+D G+
Sbjct  156   IQAFSSVNLASGRPTVVLGDA---RQVNPDNISWGYRGGKLDLNGNAVTFTRLQAADYGA  212

Query  484   TVTNSNVKQSTLSL----------------------TNTDAYMYHGNVSGNISINHIINT  521
              +TN+  ++S L L                      T T + +Y   ++++  +  + ++
Sbjct  213   VITNNAQQKSQLLLDLKAQDTNVSEPTIGNISPFGGTGTPGNLYSMILNSQTRFYILKSA  272

Query  522   T-------QQHNNNANLIFDGSVDIKNDISVRNAQLTLQGHATEHAIFKE---GNNNCPI  571
             +       +  N+ A+  F G    K   +V++    L G+A +  IF     GN + +I
Sbjct  273   SYGNTLWGNSLNDPAQWEFVGMNKNKAVQTVKDR--ILAGRAKQPVIFHGQLTGNMDVAI  330

Query  572   PFLCQKD---YSAAIKDQESTVNKRYNT-EYKSNNQI---------ASFSQPDWESRKFN  618
             P +       + ++++  E+T+++   T  ++++  I          S++Q DWE+R+F 
Sbjct  331   PQVPGGRKVIFDGSVNLPEGTLSQDSGTLIFQGHPVIHASISGSAPVSLNQKDWENRQFT  390

Query  619   FRKLNLENATLSIGRDANVKGHIEAKNSQIVLGNKTAYIDMFSGRN---ITGEGFGFRQQ  675
              + L+L +A + ++R+A+++++I + NS+I LG+  A++D   G     I  EG +  + 
Sbjct  391   MKTLSLKDADFHLSRNASLNSDIKSDNSHITLGSDRAFVDKNDGTGNYVIPEEGTSVPDT  450

Query  676   L-------------RSGDSAGESSFNGSLSAQNSKITVGDKSTVTMTGALSLINTDLIIN  722
             +             +++     S F G++ A +S +++   + V +T++ ++  + L ++
Sbjct  451   VNDRSQYEGNITLNHNSALDIGSRFTGGIDAYDSAVSI-TSPDVLLTAPGAFAGSSLTVH  509

Query  723   KGATVTAQGKMYVDKAIELAgtl----tltgtptENNKYSPAIYMSDGYNMTEDGATLKA  778
              G+ +TA   ++ D  I+ +       + T      N+Y+PA+Y++DGY++T D A+L  
Sbjct  510   DGGHLTALNGLFSDGHIQAGKNGKITLSGTPVKDTANQYAPAVYLTDGYDLTGDNAALEI  569

Query  779   QNYAWVNGNIKSDKKASILFGVDQYKEDNLDKTTHTPLATGLLGGFDTSYTGGIDAPAAS  838
                A  +G+I +   +++ +G D   E     T+ +++A +LL G+++++ G+I +  A 
Sbjct  570   TRGAHASGDIHASAASTVTIGSDTPAELASAETAASAFAGSLLEGYNAAFNGAITGGRAD  629

Query  839   ASMYNTLWRVNGQSALQSLKTRDSLLLFSNIENSGFHTVTVNTLDATNTAVIMRADLSQS  898
              SM N+LW + G+SA++SL  R+S +  S+  +  F+T+TVN LDAT +  ++R+DL   
Sbjct  630   VSMHNALWTLGGDSAIHSLTVRNSRI--SSEGDRTFRTLTVNKLDATGSDFVLRTDL---  684

Query  899   VNQSDKLIVKNQLTGSNNSLSVDIQKVGNNNSGLNVDLITAPKGSNKEIFKASTQAIGFS  958
              +++DK+ V ++ TGS+NSL+V + +   +  +LN+ L+TAP G++ E+FKA+T+  GFS
Sbjct  685   -KNADKINVTEKATGSDNSLNVSFMNNPAQGQALNIPLVTAPAGTSAEMFKAGTRVTGFS  743

Query  959   NISPVISTKEDQEHTTWTLTGYKVAENTASSGAAKSYMSGNYKAFLTEVNNLNKRMGDLR  1018
              ++P +       +T W L G+K   + A+++ A S+M++ YK F+TEVNNLNKRMGDLR
Sbjct  744   RVTPTLHVDTSGGNTKWILDGFKAEADKAAAAKADSFMNAGYKNFMTEVNNLNKRMGDLR  803

Query  1019  DTNGEAGAWARIMsgagsasggysDNYTHVQIGVDKKHELDGLDLFTGLTMTYTDSHASS  1078
             DTNG+AGAWARIMSGAGSA GGYSDNYTHVQ+G DKKHELDG+DLFTG+TMTYTDS A S
Sbjct  804   DTNGDAGAWARIMSGAGSADGGYSDNYTHVQVGFDKKHELDGVDLFTGVTMTYTDSSADS  863

Query  1079  NAFSGKTKSVGAGLYASAIFDSGAYIDLISKYVHHDNEYSATFAGLGTKDYSSHSLYVGA  1138
             +AFSGKTKSVG+GLYASA+F+SGAYIDLI+KY+HHDN+Y++ FA+LGTK+Y++HS Y GA
Sbjct  864   HAFSGKTKSVGGGLYASALFESGAYIDLIGKYIHHDNDYTGNFASLGTKHYNTHSWYAGA  923

Query  1139  EAGYRYHVTEDSWIEPQAELVYGAVSGKRFDWQDRGMSVTMKDKDFNPLIGRTGVDVGKS  1198
             E+GYRYH+TED+ IEPQAELVYGAVSGK F W+D +M ++MK++DF+PL+GRTGV++GK+
Sbjct  924   ETGYRYHLTEDTFIEPQAELVYGAVSGKTFRWKDGDMDLSMKNRDFSPLVGRTGVELGKT  983

Query  1199  FSGKDWKVTARAGLGYQFDLFANGETVLRDASGEKRIKGEKDGRILMNVGLNAEIRDNLR  1258
             FSGKDW VTARAG + QFDL+ NGETVLRDASGEKRIKGEKD+R+L NVG+NA+I+DN+R
Sbjct  984   FSGKDWSVTARAGTSWQFDLLNNGETVLRDASGEKRIKGEKDSRMLFNVGMNAQIKDNMR  1043

Query  1259  FGLEFEKSAFGKYNVDNAINANFRYSF  1285
             FGLEFEKSAFGKYNVDNA+NANFRY F
Sbjct  1044  FGLEFEKSAFGKYNVDNAVNANFRYMF  1070

47) O3M_22910 in NC_018650


> NC_004741_P1|8|G6|30064293|NP_838464.1|Shigella_flexneri_2a_str._2457T|-|15275..18487|pic|S3178|serine 
protease precurser
Length=1070

 Score =  601 bits (2270),  Expect = 1e-172, Method: Compositional matrix adjust.
 Identities = 439/1047 (42%), Positives = 684/1047 (66%), Gaps = 92/1047 (8%)

Query  315   LDGKKQELSSIIKDKDLSVSG-GGVLTLKQDTDLGIGGLIFDKNQTYKVYG-KDKSYKGA  372
             ++G+K++   +  +K+L  SG  G + LK+    G G L F  +++Y V +  +K+  GA
Sbjct  40    MHGQKDN--DLNAGKNLVFSGQNGAIILKDSVTQGAGYLEF--KDSYTVSAESGKTWTGA  95

Query  373   GIDIDNNTTVEWNVKGVAGDNLHKIGSGTLDVKIA--QGNNLKIGNGTVILSAE------  424
             GI  D+ T V W+V+GVAGDNLHK+G GTL ++ +  +   LK G+G V+L+ +      
Sbjct  96    GIITDKGTNVTWKVNGVAGDNLHKLGEGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGN  155

Query  425   -KAFNKIYMAGGKGTVKINAKDALSESGNGEIYFTRNGGTLDLNGYDQSFQKIAATDAGT  483
              +AF+ + +A+G+ TV +       +   ++I     GG LDLNG   +F ++ A+D G+
Sbjct  156   IQAFSSVNLASGRPTVVLGDA---RQVNPDNISWGYRGGKLDLNGNAVTFTRLQAADYGA  212

Query  484   TVTNSNVKQSTLSL----------------------TNTDAYMYHGNVSGNISINHIINT  521
              +TN+  ++S L L                      T T + +Y   ++++  +  + ++
Sbjct  213   VITNNAQQKSQLLLDLKAQDTNVSEPTIGNISPFGGTGTPGNLYSMILNSQTRFYILKSA  272

Query  522   T-------QQHNNNANLIFDGSVDIKNDISVRNAQLTLQGHATEHAIFKE---GNNNCPI  571
             +       +  N+ A+  F G    K   +V++    L G+A +  IF     GN + +I
Sbjct  273   SYGNTLWGNSLNDPAQWEFVGMNKNKAVQTVKDR--ILAGRAKQPVIFHGQLTGNMDVAI  330

Query  572   PFLCQKD---YSAAIKDQESTVNKRYNT-EYKSNNQI---------ASFSQPDWESRKFN  618
             P +       + ++++  E+T+++   T  ++++  I          S++Q DWE+R+F 
Sbjct  331   PQVPGGRKVIFDGSVNLPEGTLSQDSGTLIFQGHPVIHASISGSAPVSLNQKDWENRQFT  390

Query  619   FRKLNLENATLSIGRDANVKGHIEAKNSQIVLGNKTAYIDMFSGRN---ITGEGFGFRQQ  675
              + L+L +A + ++R+A+++++I + NS+I LG+  A++D   G     I  EG +  + 
Sbjct  391   MKTLSLKDADFHLSRNASLNSDIKSDNSHITLGSDRAFVDKNDGTGNYVIPEEGTSVPDT  450

Query  676   L-------------RSGDSAGESSFNGSLSAQNSKITVGDKSTVTMTGALSLINTDLIIN  722
             +             +++     S F G++ A +S +++   + V +T++ ++  + L ++
Sbjct  451   VNDRSQYEGNITLNHNSALDIGSRFTGGIDAYDSAVSI-TSPDVLLTAPGAFAGSSLTVH  509

Query  723   KGATVTAQGKMYVDKAIELAgtl----tltgtptENNKYSPAIYMSDGYNMTEDGATLKA  778
              G+ +TA   ++ D  I+ +       + T      N+Y+PA+Y++DGY++T D A+L  
Sbjct  510   DGGHLTALNGLFSDGHIQAGKNGKITLSGTPVKDTANQYAPAVYLTDGYDLTGDNAALEI  569

Query  779   QNYAWVNGNIKSDKKASILFGVDQYKEDNLDKTTHTPLATGLLGGFDTSYTGGIDAPAAS  838
                A  +G+I +   +++ +G D   E     T+ +++A +LL G+++++ G+I +  A 
Sbjct  570   TRGAHASGDIHASAASTVTIGSDTPAELASAETAASAFAGSLLEGYNAAFNGAITGGRAD  629

Query  839   ASMYNTLWRVNGQSALQSLKTRDSLLLFSNIENSGFHTVTVNTLDATNTAVIMRADLSQS  898
              SM N+LW + G+SA++SL  R+S +  S+  +  F+T+TVN LDAT +  ++R+DL   
Sbjct  630   VSMHNALWTLGGDSAIHSLTVRNSRI--SSEGDRTFRTLTVNKLDATGSDFVLRTDL---  684

Query  899   VNQSDKLIVKNQLTGSNNSLSVDIQKVGNNNSGLNVDLITAPKGSNKEIFKASTQAIGFS  958
              +++DK+ V ++ TGS+NSL+V + +   +  +LN+ L+TAP G++ E+FKA+T+  GFS
Sbjct  685   -KNADKINVTEKATGSDNSLNVSFMNNPAQGQALNIPLVTAPAGTSAEMFKAGTRVTGFS  743

Query  959   NISPVISTKEDQEHTTWTLTGYKVAENTASSGAAKSYMSGNYKAFLTEVNNLNKRMGDLR  1018
              ++P +       +T W L G+K   + A+++ A S+M++ YK F+TEVNNLNKRMGDLR
Sbjct  744   RVTPTLHVDTSGGNTKWILDGFKAEADKAAAAKADSFMNAGYKNFMTEVNNLNKRMGDLR  803

Query  1019  DTNGEAGAWARIMsgagsasggysDNYTHVQIGVDKKHELDGLDLFTGLTMTYTDSHASS  1078
             DTNG+AGAWARIMSGAGSA GGYSDNYTHVQ+G DKKHELDG+DLFTG+TMTYTDS A S
Sbjct  804   DTNGDAGAWARIMSGAGSADGGYSDNYTHVQVGFDKKHELDGVDLFTGVTMTYTDSSADS  863

Query  1079  NAFSGKTKSVGAGLYASAIFDSGAYIDLISKYVHHDNEYSATFAGLGTKDYSSHSLYVGA  1138
             +AFSGKTKSVG+GLYASA+F+SGAYIDLI+KY+HHDN+Y++ FA+LGTK+Y++HS Y GA
Sbjct  864   HAFSGKTKSVGGGLYASALFESGAYIDLIGKYIHHDNDYTGNFASLGTKHYNTHSWYAGA  923

Query  1139  EAGYRYHVTEDSWIEPQAELVYGAVSGKRFDWQDRGMSVTMKDKDFNPLIGRTGVDVGKS  1198
             E+GYRYH+TED+ IEPQAELVYGAVSGK F W+D +M ++MK++DF+PL+GRTGV++GK+
Sbjct  924   ETGYRYHLTEDTFIEPQAELVYGAVSGKTFRWKDGDMDLSMKNRDFSPLVGRTGVELGKT  983

Query  1199  FSGKDWKVTARAGLGYQFDLFANGETVLRDASGEKRIKGEKDGRILMNVGLNAEIRDNLR  1258
             FSGKDW VTARAG + QFDL+ NGETVLRDASGEKRIKGEKD+R+L NVG+NA+I+DN+R
Sbjct  984   FSGKDWSVTARAGTSWQFDLLNNGETVLRDASGEKRIKGEKDSRMLFNVGMNAQIKDNMR  1043

Query  1259  FGLEFEKSAFGKYNVDNAINANFRYSF  1285
             FGLEFEKSAFGKYNVDNA+NANFRY F
Sbjct  1044  FGLEFEKSAFGKYNVDNAVNANFRYMF  1070

48) O3O_02375 in NC_018661


> NC_004741_P1|8|G6|30064293|NP_838464.1|Shigella_flexneri_2a_str._2457T|-|15275..18487|pic|S3178|serine 
protease precurser
Length=1070

 Score =  601 bits (2270),  Expect = 1e-172, Method: Compositional matrix adjust.
 Identities = 439/1047 (42%), Positives = 684/1047 (66%), Gaps = 92/1047 (8%)

Query  315   LDGKKQELSSIIKDKDLSVSG-GGVLTLKQDTDLGIGGLIFDKNQTYKVYG-KDKSYKGA  372
             ++G+K++   +  +K+L  SG  G + LK+    G G L F  +++Y V +  +K+  GA
Sbjct  40    MHGQKDN--DLNAGKNLVFSGQNGAIILKDSVTQGAGYLEF--KDSYTVSAESGKTWTGA  95

Query  373   GIDIDNNTTVEWNVKGVAGDNLHKIGSGTLDVKIA--QGNNLKIGNGTVILSAE------  424
             GI  D+ T V W+V+GVAGDNLHK+G GTL ++ +  +   LK G+G V+L+ +      
Sbjct  96    GIITDKGTNVTWKVNGVAGDNLHKLGEGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGN  155

Query  425   -KAFNKIYMAGGKGTVKINAKDALSESGNGEIYFTRNGGTLDLNGYDQSFQKIAATDAGT  483
              +AF+ + +A+G+ TV +       +   ++I     GG LDLNG   +F ++ A+D G+
Sbjct  156   IQAFSSVNLASGRPTVVLGDA---RQVNPDNISWGYRGGKLDLNGNAVTFTRLQAADYGA  212

Query  484   TVTNSNVKQSTLSL----------------------TNTDAYMYHGNVSGNISINHIINT  521
              +TN+  ++S L L                      T T + +Y   ++++  +  + ++
Sbjct  213   VITNNAQQKSQLLLDLKAQDTNVSEPTIGNISPFGGTGTPGNLYSMILNSQTRFYILKSA  272

Query  522   T-------QQHNNNANLIFDGSVDIKNDISVRNAQLTLQGHATEHAIFKE---GNNNCPI  571
             +       +  N+ A+  F G    K   +V++    L G+A +  IF     GN + +I
Sbjct  273   SYGNTLWGNSLNDPAQWEFVGMNKNKAVQTVKDR--ILAGRAKQPVIFHGQLTGNMDVAI  330

Query  572   PFLCQKD---YSAAIKDQESTVNKRYNT-EYKSNNQI---------ASFSQPDWESRKFN  618
             P +       + ++++  E+T+++   T  ++++  I          S++Q DWE+R+F 
Sbjct  331   PQVPGGRKVIFDGSVNLPEGTLSQDSGTLIFQGHPVIHASISGSAPVSLNQKDWENRQFT  390

Query  619   FRKLNLENATLSIGRDANVKGHIEAKNSQIVLGNKTAYIDMFSGRN---ITGEGFGFRQQ  675
              + L+L +A + ++R+A+++++I + NS+I LG+  A++D   G     I  EG +  + 
Sbjct  391   MKTLSLKDADFHLSRNASLNSDIKSDNSHITLGSDRAFVDKNDGTGNYVIPEEGTSVPDT  450

Query  676   L-------------RSGDSAGESSFNGSLSAQNSKITVGDKSTVTMTGALSLINTDLIIN  722
             +             +++     S F G++ A +S +++   + V +T++ ++  + L ++
Sbjct  451   VNDRSQYEGNITLNHNSALDIGSRFTGGIDAYDSAVSI-TSPDVLLTAPGAFAGSSLTVH  509

Query  723   KGATVTAQGKMYVDKAIELAgtl----tltgtptENNKYSPAIYMSDGYNMTEDGATLKA  778
              G+ +TA   ++ D  I+ +       + T      N+Y+PA+Y++DGY++T D A+L  
Sbjct  510   DGGHLTALNGLFSDGHIQAGKNGKITLSGTPVKDTANQYAPAVYLTDGYDLTGDNAALEI  569

Query  779   QNYAWVNGNIKSDKKASILFGVDQYKEDNLDKTTHTPLATGLLGGFDTSYTGGIDAPAAS  838
                A  +G+I +   +++ +G D   E     T+ +++A +LL G+++++ G+I +  A 
Sbjct  570   TRGAHASGDIHASAASTVTIGSDTPAELASAETAASAFAGSLLEGYNAAFNGAITGGRAD  629

Query  839   ASMYNTLWRVNGQSALQSLKTRDSLLLFSNIENSGFHTVTVNTLDATNTAVIMRADLSQS  898
              SM N+LW + G+SA++SL  R+S +  S+  +  F+T+TVN LDAT +  ++R+DL   
Sbjct  630   VSMHNALWTLGGDSAIHSLTVRNSRI--SSEGDRTFRTLTVNKLDATGSDFVLRTDL---  684

Query  899   VNQSDKLIVKNQLTGSNNSLSVDIQKVGNNNSGLNVDLITAPKGSNKEIFKASTQAIGFS  958
              +++DK+ V ++ TGS+NSL+V + +   +  +LN+ L+TAP G++ E+FKA+T+  GFS
Sbjct  685   -KNADKINVTEKATGSDNSLNVSFMNNPAQGQALNIPLVTAPAGTSAEMFKAGTRVTGFS  743

Query  959   NISPVISTKEDQEHTTWTLTGYKVAENTASSGAAKSYMSGNYKAFLTEVNNLNKRMGDLR  1018
              ++P +       +T W L G+K   + A+++ A S+M++ YK F+TEVNNLNKRMGDLR
Sbjct  744   RVTPTLHVDTSGGNTKWILDGFKAEADKAAAAKADSFMNAGYKNFMTEVNNLNKRMGDLR  803

Query  1019  DTNGEAGAWARIMsgagsasggysDNYTHVQIGVDKKHELDGLDLFTGLTMTYTDSHASS  1078
             DTNG+AGAWARIMSGAGSA GGYSDNYTHVQ+G DKKHELDG+DLFTG+TMTYTDS A S
Sbjct  804   DTNGDAGAWARIMSGAGSADGGYSDNYTHVQVGFDKKHELDGVDLFTGVTMTYTDSSADS  863

Query  1079  NAFSGKTKSVGAGLYASAIFDSGAYIDLISKYVHHDNEYSATFAGLGTKDYSSHSLYVGA  1138
             +AFSGKTKSVG+GLYASA+F+SGAYIDLI+KY+HHDN+Y++ FA+LGTK+Y++HS Y GA
Sbjct  864   HAFSGKTKSVGGGLYASALFESGAYIDLIGKYIHHDNDYTGNFASLGTKHYNTHSWYAGA  923

Query  1139  EAGYRYHVTEDSWIEPQAELVYGAVSGKRFDWQDRGMSVTMKDKDFNPLIGRTGVDVGKS  1198
             E+GYRYH+TED+ IEPQAELVYGAVSGK F W+D +M ++MK++DF+PL+GRTGV++GK+
Sbjct  924   ETGYRYHLTEDTFIEPQAELVYGAVSGKTFRWKDGDMDLSMKNRDFSPLVGRTGVELGKT  983

Query  1199  FSGKDWKVTARAGLGYQFDLFANGETVLRDASGEKRIKGEKDGRILMNVGLNAEIRDNLR  1258
             FSGKDW VTARAG + QFDL+ NGETVLRDASGEKRIKGEKD+R+L NVG+NA+I+DN+R
Sbjct  984   FSGKDWSVTARAGTSWQFDLLNNGETVLRDASGEKRIKGEKDSRMLFNVGMNAQIKDNMR  1043

Query  1259  FGLEFEKSAFGKYNVDNAINANFRYSF  1285
             FGLEFEKSAFGKYNVDNA+NANFRY F
Sbjct  1044  FGLEFEKSAFGKYNVDNAVNANFRYMF  1070

49) O3K_23005 in NC_018658


> NC_004741_P1|8|G6|30064293|NP_838464.1|Shigella_flexneri_2a_str._2457T|-|15275..18487|pic|S3178|serine 
protease precurser
Length=1070

 Score =  601 bits (2270),  Expect = 1e-172, Method: Compositional matrix adjust.
 Identities = 439/1047 (42%), Positives = 684/1047 (66%), Gaps = 92/1047 (8%)

Query  315   LDGKKQELSSIIKDKDLSVSG-GGVLTLKQDTDLGIGGLIFDKNQTYKVYG-KDKSYKGA  372
             ++G+K++   +  +K+L  SG  G + LK+    G G L F  +++Y V +  +K+  GA
Sbjct  40    MHGQKDN--DLNAGKNLVFSGQNGAIILKDSVTQGAGYLEF--KDSYTVSAESGKTWTGA  95

Query  373   GIDIDNNTTVEWNVKGVAGDNLHKIGSGTLDVKIA--QGNNLKIGNGTVILSAE------  424
             GI  D+ T V W+V+GVAGDNLHK+G GTL ++ +  +   LK G+G V+L+ +      
Sbjct  96    GIITDKGTNVTWKVNGVAGDNLHKLGEGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGN  155

Query  425   -KAFNKIYMAGGKGTVKINAKDALSESGNGEIYFTRNGGTLDLNGYDQSFQKIAATDAGT  483
              +AF+ + +A+G+ TV +       +   ++I     GG LDLNG   +F ++ A+D G+
Sbjct  156   IQAFSSVNLASGRPTVVLGDA---RQVNPDNISWGYRGGKLDLNGNAVTFTRLQAADYGA  212

Query  484   TVTNSNVKQSTLSL----------------------TNTDAYMYHGNVSGNISINHIINT  521
              +TN+  ++S L L                      T T + +Y   ++++  +  + ++
Sbjct  213   VITNNAQQKSQLLLDLKAQDTNVSEPTIGNISPFGGTGTPGNLYSMILNSQTRFYILKSA  272

Query  522   T-------QQHNNNANLIFDGSVDIKNDISVRNAQLTLQGHATEHAIFKE---GNNNCPI  571
             +       +  N+ A+  F G    K   +V++    L G+A +  IF     GN + +I
Sbjct  273   SYGNTLWGNSLNDPAQWEFVGMNKNKAVQTVKDR--ILAGRAKQPVIFHGQLTGNMDVAI  330

Query  572   PFLCQKD---YSAAIKDQESTVNKRYNT-EYKSNNQI---------ASFSQPDWESRKFN  618
             P +       + ++++  E+T+++   T  ++++  I          S++Q DWE+R+F 
Sbjct  331   PQVPGGRKVIFDGSVNLPEGTLSQDSGTLIFQGHPVIHASISGSAPVSLNQKDWENRQFT  390

Query  619   FRKLNLENATLSIGRDANVKGHIEAKNSQIVLGNKTAYIDMFSGRN---ITGEGFGFRQQ  675
              + L+L +A + ++R+A+++++I + NS+I LG+  A++D   G     I  EG +  + 
Sbjct  391   MKTLSLKDADFHLSRNASLNSDIKSDNSHITLGSDRAFVDKNDGTGNYVIPEEGTSVPDT  450

Query  676   L-------------RSGDSAGESSFNGSLSAQNSKITVGDKSTVTMTGALSLINTDLIIN  722
             +             +++     S F G++ A +S +++   + V +T++ ++  + L ++
Sbjct  451   VNDRSQYEGNITLNHNSALDIGSRFTGGIDAYDSAVSI-TSPDVLLTAPGAFAGSSLTVH  509

Query  723   KGATVTAQGKMYVDKAIELAgtl----tltgtptENNKYSPAIYMSDGYNMTEDGATLKA  778
              G+ +TA   ++ D  I+ +       + T      N+Y+PA+Y++DGY++T D A+L  
Sbjct  510   DGGHLTALNGLFSDGHIQAGKNGKITLSGTPVKDTANQYAPAVYLTDGYDLTGDNAALEI  569

Query  779   QNYAWVNGNIKSDKKASILFGVDQYKEDNLDKTTHTPLATGLLGGFDTSYTGGIDAPAAS  838
                A  +G+I +   +++ +G D   E     T+ +++A +LL G+++++ G+I +  A 
Sbjct  570   TRGAHASGDIHASAASTVTIGSDTPAELASAETAASAFAGSLLEGYNAAFNGAITGGRAD  629

Query  839   ASMYNTLWRVNGQSALQSLKTRDSLLLFSNIENSGFHTVTVNTLDATNTAVIMRADLSQS  898
              SM N+LW + G+SA++SL  R+S +  S+  +  F+T+TVN LDAT +  ++R+DL   
Sbjct  630   VSMHNALWTLGGDSAIHSLTVRNSRI--SSEGDRTFRTLTVNKLDATGSDFVLRTDL---  684

Query  899   VNQSDKLIVKNQLTGSNNSLSVDIQKVGNNNSGLNVDLITAPKGSNKEIFKASTQAIGFS  958
              +++DK+ V ++ TGS+NSL+V + +   +  +LN+ L+TAP G++ E+FKA+T+  GFS
Sbjct  685   -KNADKINVTEKATGSDNSLNVSFMNNPAQGQALNIPLVTAPAGTSAEMFKAGTRVTGFS  743

Query  959   NISPVISTKEDQEHTTWTLTGYKVAENTASSGAAKSYMSGNYKAFLTEVNNLNKRMGDLR  1018
              ++P +       +T W L G+K   + A+++ A S+M++ YK F+TEVNNLNKRMGDLR
Sbjct  744   RVTPTLHVDTSGGNTKWILDGFKAEADKAAAAKADSFMNAGYKNFMTEVNNLNKRMGDLR  803

Query  1019  DTNGEAGAWARIMsgagsasggysDNYTHVQIGVDKKHELDGLDLFTGLTMTYTDSHASS  1078
             DTNG+AGAWARIMSGAGSA GGYSDNYTHVQ+G DKKHELDG+DLFTG+TMTYTDS A S
Sbjct  804   DTNGDAGAWARIMSGAGSADGGYSDNYTHVQVGFDKKHELDGVDLFTGVTMTYTDSSADS  863

Query  1079  NAFSGKTKSVGAGLYASAIFDSGAYIDLISKYVHHDNEYSATFAGLGTKDYSSHSLYVGA  1138
             +AFSGKTKSVG+GLYASA+F+SGAYIDLI+KY+HHDN+Y++ FA+LGTK+Y++HS Y GA
Sbjct  864   HAFSGKTKSVGGGLYASALFESGAYIDLIGKYIHHDNDYTGNFASLGTKHYNTHSWYAGA  923

Query  1139  EAGYRYHVTEDSWIEPQAELVYGAVSGKRFDWQDRGMSVTMKDKDFNPLIGRTGVDVGKS  1198
             E+GYRYH+TED+ IEPQAELVYGAVSGK F W+D +M ++MK++DF+PL+GRTGV++GK+
Sbjct  924   ETGYRYHLTEDTFIEPQAELVYGAVSGKTFRWKDGDMDLSMKNRDFSPLVGRTGVELGKT  983

Query  1199  FSGKDWKVTARAGLGYQFDLFANGETVLRDASGEKRIKGEKDGRILMNVGLNAEIRDNLR  1258
             FSGKDW VTARAG + QFDL+ NGETVLRDASGEKRIKGEKD+R+L NVG+NA+I+DN+R
Sbjct  984   FSGKDWSVTARAGTSWQFDLLNNGETVLRDASGEKRIKGEKDSRMLFNVGMNAQIKDNMR  1043

Query  1259  FGLEFEKSAFGKYNVDNAINANFRYSF  1285
             FGLEFEKSAFGKYNVDNA+NANFRY F
Sbjct  1044  FGLEFEKSAFGKYNVDNAVNANFRYMF  1070

50) SFxv_3250 in NC_017328


> NC_004741_P1|8|G6|30064293|NP_838464.1|Shigella_flexneri_2a_str._2457T|-|15275..18487|pic|S3178|serine 
protease precurser
Length=1070

 Score =  601 bits (2270),  Expect = 1e-172, Method: Compositional matrix adjust.
 Identities = 439/1047 (42%), Positives = 684/1047 (66%), Gaps = 92/1047 (8%)

Query  315   LDGKKQELSSIIKDKDLSVSG-GGVLTLKQDTDLGIGGLIFDKNQTYKVYG-KDKSYKGA  372
             ++G+K++   +  +K+L  SG  G + LK+    G G L F  +++Y V +  +K+  GA
Sbjct  40    MHGQKDN--DLNAGKNLVFSGQNGAIILKDSVTQGAGYLEF--KDSYTVSAESGKTWTGA  95

Query  373   GIDIDNNTTVEWNVKGVAGDNLHKIGSGTLDVKIA--QGNNLKIGNGTVILSAE------  424
             GI  D+ T V W+V+GVAGDNLHK+G GTL ++ +  +   LK G+G V+L+ +      
Sbjct  96    GIITDKGTNVTWKVNGVAGDNLHKLGEGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGN  155

Query  425   -KAFNKIYMAGGKGTVKINAKDALSESGNGEIYFTRNGGTLDLNGYDQSFQKIAATDAGT  483
              +AF+ + +A+G+ TV +       +   ++I     GG LDLNG   +F ++ A+D G+
Sbjct  156   IQAFSSVNLASGRPTVVLGDA---RQVNPDNISWGYRGGKLDLNGNAVTFTRLQAADYGA  212

Query  484   TVTNSNVKQSTLSL----------------------TNTDAYMYHGNVSGNISINHIINT  521
              +TN+  ++S L L                      T T + +Y   ++++  +  + ++
Sbjct  213   VITNNAQQKSQLLLDLKAQDTNVSEPTIGNISPFGGTGTPGNLYSMILNSQTRFYILKSA  272

Query  522   T-------QQHNNNANLIFDGSVDIKNDISVRNAQLTLQGHATEHAIFKE---GNNNCPI  571
             +       +  N+ A+  F G    K   +V++    L G+A +  IF     GN + +I
Sbjct  273   SYGNTLWGNSLNDPAQWEFVGMNKNKAVQTVKDR--ILAGRAKQPVIFHGQLTGNMDVAI  330

Query  572   PFLCQKD---YSAAIKDQESTVNKRYNT-EYKSNNQI---------ASFSQPDWESRKFN  618
             P +       + ++++  E+T+++   T  ++++  I          S++Q DWE+R+F 
Sbjct  331   PQVPGGRKVIFDGSVNLPEGTLSQDSGTLIFQGHPVIHASISGSAPVSLNQKDWENRQFT  390

Query  619   FRKLNLENATLSIGRDANVKGHIEAKNSQIVLGNKTAYIDMFSGRN---ITGEGFGFRQQ  675
              + L+L +A + ++R+A+++++I + NS+I LG+  A++D   G     I  EG +  + 
Sbjct  391   MKTLSLKDADFHLSRNASLNSDIKSDNSHITLGSDRAFVDKNDGTGNYVIPEEGTSVPDT  450

Query  676   L-------------RSGDSAGESSFNGSLSAQNSKITVGDKSTVTMTGALSLINTDLIIN  722
             +             +++     S F G++ A +S +++   + V +T++ ++  + L ++
Sbjct  451   VNDRSQYEGNITLNHNSALDIGSRFTGGIDAYDSAVSI-TSPDVLLTAPGAFAGSSLTVH  509

Query  723   KGATVTAQGKMYVDKAIELAgtl----tltgtptENNKYSPAIYMSDGYNMTEDGATLKA  778
              G+ +TA   ++ D  I+ +       + T      N+Y+PA+Y++DGY++T D A+L  
Sbjct  510   DGGHLTALNGLFSDGHIQAGKNGKITLSGTPVKDTANQYAPAVYLTDGYDLTGDNAALEI  569

Query  779   QNYAWVNGNIKSDKKASILFGVDQYKEDNLDKTTHTPLATGLLGGFDTSYTGGIDAPAAS  838
                A  +G+I +   +++ +G D   E     T+ +++A +LL G+++++ G+I +  A 
Sbjct  570   TRGAHASGDIHASAASTVTIGSDTPAELASAETAASAFAGSLLEGYNAAFNGAITGGRAD  629

Query  839   ASMYNTLWRVNGQSALQSLKTRDSLLLFSNIENSGFHTVTVNTLDATNTAVIMRADLSQS  898
              SM N+LW + G+SA++SL  R+S +  S+  +  F+T+TVN LDAT +  ++R+DL   
Sbjct  630   VSMHNALWTLGGDSAIHSLTVRNSRI--SSEGDRTFRTLTVNKLDATGSDFVLRTDL---  684

Query  899   VNQSDKLIVKNQLTGSNNSLSVDIQKVGNNNSGLNVDLITAPKGSNKEIFKASTQAIGFS  958
              +++DK+ V ++ TGS+NSL+V + +   +  +LN+ L+TAP G++ E+FKA+T+  GFS
Sbjct  685   -KNADKINVTEKATGSDNSLNVSFMNNPAQGQALNIPLVTAPAGTSAEMFKAGTRVTGFS  743

Query  959   NISPVISTKEDQEHTTWTLTGYKVAENTASSGAAKSYMSGNYKAFLTEVNNLNKRMGDLR  1018
              ++P +       +T W L G+K   + A+++ A S+M++ YK F+TEVNNLNKRMGDLR
Sbjct  744   RVTPTLHVDTSGGNTKWILDGFKAEADKAAAAKADSFMNAGYKNFMTEVNNLNKRMGDLR  803

Query  1019  DTNGEAGAWARIMsgagsasggysDNYTHVQIGVDKKHELDGLDLFTGLTMTYTDSHASS  1078
             DTNG+AGAWARIMSGAGSA GGYSDNYTHVQ+G DKKHELDG+DLFTG+TMTYTDS A S
Sbjct  804   DTNGDAGAWARIMSGAGSADGGYSDNYTHVQVGFDKKHELDGVDLFTGVTMTYTDSSADS  863

Query  1079  NAFSGKTKSVGAGLYASAIFDSGAYIDLISKYVHHDNEYSATFAGLGTKDYSSHSLYVGA  1138
             +AFSGKTKSVG+GLYASA+F+SGAYIDLI+KY+HHDN+Y++ FA+LGTK+Y++HS Y GA
Sbjct  864   HAFSGKTKSVGGGLYASALFESGAYIDLIGKYIHHDNDYTGNFASLGTKHYNTHSWYAGA  923

Query  1139  EAGYRYHVTEDSWIEPQAELVYGAVSGKRFDWQDRGMSVTMKDKDFNPLIGRTGVDVGKS  1198
             E+GYRYH+TED+ IEPQAELVYGAVSGK F W+D +M ++MK++DF+PL+GRTGV++GK+
Sbjct  924   ETGYRYHLTEDTFIEPQAELVYGAVSGKTFRWKDGDMDLSMKNRDFSPLVGRTGVELGKT  983

Query  1199  FSGKDWKVTARAGLGYQFDLFANGETVLRDASGEKRIKGEKDGRILMNVGLNAEIRDNLR  1258
             FSGKDW VTARAG + QFDL+ NGETVLRDASGEKRIKGEKD+R+L NVG+NA+I+DN+R
Sbjct  984   FSGKDWSVTARAGTSWQFDLLNNGETVLRDASGEKRIKGEKDSRMLFNVGMNAQIKDNMR  1043

Query  1259  FGLEFEKSAFGKYNVDNAINANFRYSF  1285
             FGLEFEKSAFGKYNVDNA+NANFRY F
Sbjct  1044  FGLEFEKSAFGKYNVDNAVNANFRYMF  1070

51) sigA in NC_004741


> NC_004741_P1|8|G6|30064293|NP_838464.1|Shigella_flexneri_2a_str._2457T|-|15275..18487|pic|S3178|serine 
protease precurser
Length=1070

 Score =  601 bits (2270),  Expect = 1e-172, Method: Compositional matrix adjust.
 Identities = 439/1047 (42%), Positives = 684/1047 (66%), Gaps = 92/1047 (8%)

Query  315   LDGKKQELSSIIKDKDLSVSG-GGVLTLKQDTDLGIGGLIFDKNQTYKVYG-KDKSYKGA  372
             ++G+K++   +  +K+L  SG  G + LK+    G G L F  +++Y V +  +K+  GA
Sbjct  40    MHGQKDN--DLNAGKNLVFSGQNGAIILKDSVTQGAGYLEF--KDSYTVSAESGKTWTGA  95

Query  373   GIDIDNNTTVEWNVKGVAGDNLHKIGSGTLDVKIA--QGNNLKIGNGTVILSAE------  424
             GI  D+ T V W+V+GVAGDNLHK+G GTL ++ +  +   LK G+G V+L+ +      
Sbjct  96    GIITDKGTNVTWKVNGVAGDNLHKLGEGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGN  155

Query  425   -KAFNKIYMAGGKGTVKINAKDALSESGNGEIYFTRNGGTLDLNGYDQSFQKIAATDAGT  483
              +AF+ + +A+G+ TV +       +   ++I     GG LDLNG   +F ++ A+D G+
Sbjct  156   IQAFSSVNLASGRPTVVLGDA---RQVNPDNISWGYRGGKLDLNGNAVTFTRLQAADYGA  212

Query  484   TVTNSNVKQSTLSL----------------------TNTDAYMYHGNVSGNISINHIINT  521
              +TN+  ++S L L                      T T + +Y   ++++  +  + ++
Sbjct  213   VITNNAQQKSQLLLDLKAQDTNVSEPTIGNISPFGGTGTPGNLYSMILNSQTRFYILKSA  272

Query  522   T-------QQHNNNANLIFDGSVDIKNDISVRNAQLTLQGHATEHAIFKE---GNNNCPI  571
             +       +  N+ A+  F G    K   +V++    L G+A +  IF     GN + +I
Sbjct  273   SYGNTLWGNSLNDPAQWEFVGMNKNKAVQTVKDR--ILAGRAKQPVIFHGQLTGNMDVAI  330

Query  572   PFLCQKD---YSAAIKDQESTVNKRYNT-EYKSNNQI---------ASFSQPDWESRKFN  618
             P +       + ++++  E+T+++   T  ++++  I          S++Q DWE+R+F 
Sbjct  331   PQVPGGRKVIFDGSVNLPEGTLSQDSGTLIFQGHPVIHASISGSAPVSLNQKDWENRQFT  390

Query  619   FRKLNLENATLSIGRDANVKGHIEAKNSQIVLGNKTAYIDMFSGRN---ITGEGFGFRQQ  675
              + L+L +A + ++R+A+++++I + NS+I LG+  A++D   G     I  EG +  + 
Sbjct  391   MKTLSLKDADFHLSRNASLNSDIKSDNSHITLGSDRAFVDKNDGTGNYVIPEEGTSVPDT  450

Query  676   L-------------RSGDSAGESSFNGSLSAQNSKITVGDKSTVTMTGALSLINTDLIIN  722
             +             +++     S F G++ A +S +++   + V +T++ ++  + L ++
Sbjct  451   VNDRSQYEGNITLNHNSALDIGSRFTGGIDAYDSAVSI-TSPDVLLTAPGAFAGSSLTVH  509

Query  723   KGATVTAQGKMYVDKAIELAgtl----tltgtptENNKYSPAIYMSDGYNMTEDGATLKA  778
              G+ +TA   ++ D  I+ +       + T      N+Y+PA+Y++DGY++T D A+L  
Sbjct  510   DGGHLTALNGLFSDGHIQAGKNGKITLSGTPVKDTANQYAPAVYLTDGYDLTGDNAALEI  569

Query  779   QNYAWVNGNIKSDKKASILFGVDQYKEDNLDKTTHTPLATGLLGGFDTSYTGGIDAPAAS  838
                A  +G+I +   +++ +G D   E     T+ +++A +LL G+++++ G+I +  A 
Sbjct  570   TRGAHASGDIHASAASTVTIGSDTPAELASAETAASAFAGSLLEGYNAAFNGAITGGRAD  629

Query  839   ASMYNTLWRVNGQSALQSLKTRDSLLLFSNIENSGFHTVTVNTLDATNTAVIMRADLSQS  898
              SM N+LW + G+SA++SL  R+S +  S+  +  F+T+TVN LDAT +  ++R+DL   
Sbjct  630   VSMHNALWTLGGDSAIHSLTVRNSRI--SSEGDRTFRTLTVNKLDATGSDFVLRTDL---  684

Query  899   VNQSDKLIVKNQLTGSNNSLSVDIQKVGNNNSGLNVDLITAPKGSNKEIFKASTQAIGFS  958
              +++DK+ V ++ TGS+NSL+V + +   +  +LN+ L+TAP G++ E+FKA+T+  GFS
Sbjct  685   -KNADKINVTEKATGSDNSLNVSFMNNPAQGQALNIPLVTAPAGTSAEMFKAGTRVTGFS  743

Query  959   NISPVISTKEDQEHTTWTLTGYKVAENTASSGAAKSYMSGNYKAFLTEVNNLNKRMGDLR  1018
              ++P +       +T W L G+K   + A+++ A S+M++ YK F+TEVNNLNKRMGDLR
Sbjct  744   RVTPTLHVDTSGGNTKWILDGFKAEADKAAAAKADSFMNAGYKNFMTEVNNLNKRMGDLR  803

Query  1019  DTNGEAGAWARIMsgagsasggysDNYTHVQIGVDKKHELDGLDLFTGLTMTYTDSHASS  1078
             DTNG+AGAWARIMSGAGSA GGYSDNYTHVQ+G DKKHELDG+DLFTG+TMTYTDS A S
Sbjct  804   DTNGDAGAWARIMSGAGSADGGYSDNYTHVQVGFDKKHELDGVDLFTGVTMTYTDSSADS  863

Query  1079  NAFSGKTKSVGAGLYASAIFDSGAYIDLISKYVHHDNEYSATFAGLGTKDYSSHSLYVGA  1138
             +AFSGKTKSVG+GLYASA+F+SGAYIDLI+KY+HHDN+Y++ FA+LGTK+Y++HS Y GA
Sbjct  864   HAFSGKTKSVGGGLYASALFESGAYIDLIGKYIHHDNDYTGNFASLGTKHYNTHSWYAGA  923

Query  1139  EAGYRYHVTEDSWIEPQAELVYGAVSGKRFDWQDRGMSVTMKDKDFNPLIGRTGVDVGKS  1198
             E+GYRYH+TED+ IEPQAELVYGAVSGK F W+D +M ++MK++DF+PL+GRTGV++GK+
Sbjct  924   ETGYRYHLTEDTFIEPQAELVYGAVSGKTFRWKDGDMDLSMKNRDFSPLVGRTGVELGKT  983

Query  1199  FSGKDWKVTARAGLGYQFDLFANGETVLRDASGEKRIKGEKDGRILMNVGLNAEIRDNLR  1258
             FSGKDW VTARAG + QFDL+ NGETVLRDASGEKRIKGEKD+R+L NVG+NA+I+DN+R
Sbjct  984   FSGKDWSVTARAGTSWQFDLLNNGETVLRDASGEKRIKGEKDSRMLFNVGMNAQIKDNMR  1043

Query  1259  FGLEFEKSAFGKYNVDNAINANFRYSF  1285
             FGLEFEKSAFGKYNVDNA+NANFRY F
Sbjct  1044  FGLEFEKSAFGKYNVDNAVNANFRYMF  1070

52) sigA in NC_004337


> NC_004741_P1|8|G6|30064293|NP_838464.1|Shigella_flexneri_2a_str._2457T|-|15275..18487|pic|S3178|serine 
protease precurser
Length=1070

 Score =  601 bits (2270),  Expect = 1e-172, Method: Compositional matrix adjust.
 Identities = 439/1047 (42%), Positives = 684/1047 (66%), Gaps = 92/1047 (8%)

Query  315   LDGKKQELSSIIKDKDLSVSG-GGVLTLKQDTDLGIGGLIFDKNQTYKVYG-KDKSYKGA  372
             ++G+K++   +  +K+L  SG  G + LK+    G G L F  +++Y V +  +K+  GA
Sbjct  40    MHGQKDN--DLNAGKNLVFSGQNGAIILKDSVTQGAGYLEF--KDSYTVSAESGKTWTGA  95

Query  373   GIDIDNNTTVEWNVKGVAGDNLHKIGSGTLDVKIA--QGNNLKIGNGTVILSAE------  424
             GI  D+ T V W+V+GVAGDNLHK+G GTL ++ +  +   LK G+G V+L+ +      
Sbjct  96    GIITDKGTNVTWKVNGVAGDNLHKLGEGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGN  155

Query  425   -KAFNKIYMAGGKGTVKINAKDALSESGNGEIYFTRNGGTLDLNGYDQSFQKIAATDAGT  483
              +AF+ + +A+G+ TV +       +   ++I     GG LDLNG   +F ++ A+D G+
Sbjct  156   IQAFSSVNLASGRPTVVLGDA---RQVNPDNISWGYRGGKLDLNGNAVTFTRLQAADYGA  212

Query  484   TVTNSNVKQSTLSL----------------------TNTDAYMYHGNVSGNISINHIINT  521
              +TN+  ++S L L                      T T + +Y   ++++  +  + ++
Sbjct  213   VITNNAQQKSQLLLDLKAQDTNVSEPTIGNISPFGGTGTPGNLYSMILNSQTRFYILKSA  272

Query  522   T-------QQHNNNANLIFDGSVDIKNDISVRNAQLTLQGHATEHAIFKE---GNNNCPI  571
             +       +  N+ A+  F G    K   +V++    L G+A +  IF     GN + +I
Sbjct  273   SYGNTLWGNSLNDPAQWEFVGMNKNKAVQTVKDR--ILAGRAKQPVIFHGQLTGNMDVAI  330

Query  572   PFLCQKD---YSAAIKDQESTVNKRYNT-EYKSNNQI---------ASFSQPDWESRKFN  618
             P +       + ++++  E+T+++   T  ++++  I          S++Q DWE+R+F 
Sbjct  331   PQVPGGRKVIFDGSVNLPEGTLSQDSGTLIFQGHPVIHASISGSAPVSLNQKDWENRQFT  390

Query  619   FRKLNLENATLSIGRDANVKGHIEAKNSQIVLGNKTAYIDMFSGRN---ITGEGFGFRQQ  675
              + L+L +A + ++R+A+++++I + NS+I LG+  A++D   G     I  EG +  + 
Sbjct  391   MKTLSLKDADFHLSRNASLNSDIKSDNSHITLGSDRAFVDKNDGTGNYVIPEEGTSVPDT  450

Query  676   L-------------RSGDSAGESSFNGSLSAQNSKITVGDKSTVTMTGALSLINTDLIIN  722
             +             +++     S F G++ A +S +++   + V +T++ ++  + L ++
Sbjct  451   VNDRSQYEGNITLNHNSALDIGSRFTGGIDAYDSAVSI-TSPDVLLTAPGAFAGSSLTVH  509

Query  723   KGATVTAQGKMYVDKAIELAgtl----tltgtptENNKYSPAIYMSDGYNMTEDGATLKA  778
              G+ +TA   ++ D  I+ +       + T      N+Y+PA+Y++DGY++T D A+L  
Sbjct  510   DGGHLTALNGLFSDGHIQAGKNGKITLSGTPVKDTANQYAPAVYLTDGYDLTGDNAALEI  569

Query  779   QNYAWVNGNIKSDKKASILFGVDQYKEDNLDKTTHTPLATGLLGGFDTSYTGGIDAPAAS  838
                A  +G+I +   +++ +G D   E     T+ +++A +LL G+++++ G+I +  A 
Sbjct  570   TRGAHASGDIHASAASTVTIGSDTPAELASAETAASAFAGSLLEGYNAAFNGAITGGRAD  629

Query  839   ASMYNTLWRVNGQSALQSLKTRDSLLLFSNIENSGFHTVTVNTLDATNTAVIMRADLSQS  898
              SM N+LW + G+SA++SL  R+S +  S+  +  F+T+TVN LDAT +  ++R+DL   
Sbjct  630   VSMHNALWTLGGDSAIHSLTVRNSRI--SSEGDRTFRTLTVNKLDATGSDFVLRTDL---  684

Query  899   VNQSDKLIVKNQLTGSNNSLSVDIQKVGNNNSGLNVDLITAPKGSNKEIFKASTQAIGFS  958
              +++DK+ V ++ TGS+NSL+V + +   +  +LN+ L+TAP G++ E+FKA+T+  GFS
Sbjct  685   -KNADKINVTEKATGSDNSLNVSFMNNPAQGQALNIPLVTAPAGTSAEMFKAGTRVTGFS  743

Query  959   NISPVISTKEDQEHTTWTLTGYKVAENTASSGAAKSYMSGNYKAFLTEVNNLNKRMGDLR  1018
              ++P +       +T W L G+K   + A+++ A S+M++ YK F+TEVNNLNKRMGDLR
Sbjct  744   RVTPTLHVDTSGGNTKWILDGFKAEADKAAAAKADSFMNAGYKNFMTEVNNLNKRMGDLR  803

Query  1019  DTNGEAGAWARIMsgagsasggysDNYTHVQIGVDKKHELDGLDLFTGLTMTYTDSHASS  1078
             DTNG+AGAWARIMSGAGSA GGYSDNYTHVQ+G DKKHELDG+DLFTG+TMTYTDS A S
Sbjct  804   DTNGDAGAWARIMSGAGSADGGYSDNYTHVQVGFDKKHELDGVDLFTGVTMTYTDSSADS  863

Query  1079  NAFSGKTKSVGAGLYASAIFDSGAYIDLISKYVHHDNEYSATFAGLGTKDYSSHSLYVGA  1138
             +AFSGKTKSVG+GLYASA+F+SGAYIDLI+KY+HHDN+Y++ FA+LGTK+Y++HS Y GA
Sbjct  864   HAFSGKTKSVGGGLYASALFESGAYIDLIGKYIHHDNDYTGNFASLGTKHYNTHSWYAGA  923

Query  1139  EAGYRYHVTEDSWIEPQAELVYGAVSGKRFDWQDRGMSVTMKDKDFNPLIGRTGVDVGKS  1198
             E+GYRYH+TED+ IEPQAELVYGAVSGK F W+D +M ++MK++DF+PL+GRTGV++GK+
Sbjct  924   ETGYRYHLTEDTFIEPQAELVYGAVSGKTFRWKDGDMDLSMKNRDFSPLVGRTGVELGKT  983

Query  1199  FSGKDWKVTARAGLGYQFDLFANGETVLRDASGEKRIKGEKDGRILMNVGLNAEIRDNLR  1258
             FSGKDW VTARAG + QFDL+ NGETVLRDASGEKRIKGEKD+R+L NVG+NA+I+DN+R
Sbjct  984   FSGKDWSVTARAGTSWQFDLLNNGETVLRDASGEKRIKGEKDSRMLFNVGMNAQIKDNMR  1043

Query  1259  FGLEFEKSAFGKYNVDNAINANFRYSF  1285
             FGLEFEKSAFGKYNVDNA+NANFRY F
Sbjct  1044  FGLEFEKSAFGKYNVDNAVNANFRYMF  1070

53) sigA in NC_007613


> NC_004741_P1|8|G6|30064293|NP_838464.1|Shigella_flexneri_2a_str._2457T|-|15275..18487|pic|S3178|serine 
protease precurser
Length=1070

 Score =  600 bits (2268),  Expect = 1e-172, Method: Compositional matrix adjust.
 Identities = 442/1048 (43%), Positives = 683/1048 (66%), Gaps = 94/1048 (8%)

Query  315   LDGKKQELSSIIKDKDLSVSG-GGELTLKQDTDLGIGGLIFDKNQTYKVYG-KDKSYKGA  372
             ++G+K++   +  +K+L  SG  G + LK+    G G L F  +++Y V +  +K+  GA
Sbjct  40    MHGQKDN--DLNAGKNLVFSGQNGAIILKDSVTQGAGYLEF--KDSYTVSAESGKTWTGA  95

Query  373   GIDIDNNTTVEWNVKGVAGDNLHKIGSGTLDVKIA--QGNNLKIGNGTVILSAE------  424
             GI  D+ T V W+V+GVAGDNLHK+G GTL ++ +  +   LK G+G V+L+ +      
Sbjct  96    GIITDKGTNVTWKVNGVAGDNLHKLGEGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGN  155

Query  425   -KAFNKIYMAGGKGTVKINAKDALSESGNGEIYFTRNGGTLDLNGYDQSFQKIAATDAGT  483
              +AF+ + +A+G+ TV +       +   ++I     GG LDLNG   +F ++ A+D G+
Sbjct  156   IQAFSSVNLASGRPTVVLGDA---RQVNPDNISWGYRGGKLDLNGNAVTFTRLQAADYGA  212

Query  484   TVTNSNVKQST--LSLTNTDAYMYHGNVSGNIS----------INHIINTTQQH------  525
              +TN+  ++S   L L   D+ + +  + GNIS          +  +I  +Q +      
Sbjct  213   VITNNAQQKSQLLLDLKAQDTNVSEPTI-GNISPFGGTGTPGNLYSMILNSQTRFYILKS  271

Query  526   ------------NNNANLIFDGSVDIKNDISVRNAQLTLQGHATEHAIFKE---GNNNCP  570
                         N+ A+  F G    K   +V++    L G+A +  IF     GN + +
Sbjct  272   ASYGNTLWGNSLNDPAQWEFVGMNKNKAVQTVKDR--ILAGRAKQPVIFHGQLTGNMDVA  329

Query  571   IPFLCQKD---YSAAIKDQESTVNKRYNT-EYKSNNQI---------ASFSQPDWESRKF  617
             IP +       + ++++  E+T+++   T  ++++  I          S++Q DWE+R+F
Sbjct  330   IPQVPGGRKVIFDGSVNLPEGTLSQDSGTLIFQGHPVIHASISGSAPVSLNQKDWENRQF  389

Query  618   NFRKLNLENATLSIGRDANVKGHIEAKNSQIVLGNKTAYIDMFSGRN---ITGEGFGFRQ  674
               + L+L +A + ++R+A+++++I + NS+I LG+  A++D   G     I  EG +  +
Sbjct  390   TMKTLSLKDADFHLSRNASLNSDIKSDNSHITLGSDRAFVDKNDGTGNYVIPEEGTSVPD  449

Query  675   QL-------------RSGDSAGESSFNGSLSAQNSKITVGDKSTVTMTGALSLINTDLII  721
              +             +++     S F G++ A +S +++   + V +T++ ++  + L +
Sbjct  450   TVNDRSQYEGNITLNHNSALDIGSRFTGGIDAYDSAVSI-TSPDVLLTAPGAFAGSSLTV  508

Query  722   NKGATVTAQGKMYVDKAIELAgtl----tltgtptENNKYSPAIYMSDGYNMTEDGATLK  777
             + G+ +TA   ++ D  I+ +       + T      N+Y+PA+Y++DGY++T D A+L 
Sbjct  509   HDGGHLTALNGLFSDGHIQAGKNGKITLSGTPVKDTANQYAPAVYLTDGYDLTGDNAALE  568

Query  778   AQNYAWVNGNIKSDKKASILFGVDQYKEDNLDKTTHTPLATGLLGGFDTSYTGGIDAPAA  837
                 A  +G+I +   +++ +G D   E     T+ +++A +LL G+++++ G+I +  A
Sbjct  569   ITRGAHASGDIHASAASTVTIGSDTPAELASAETAASAFAGSLLEGYNAAFNGAITGGRA  628

Query  838   SASMYNTLWRVNGQSALQSLKTRDSLLLFSNIENSGFHTVTVNTLDATNTAVIMRADLSQ  897
               SM N+LW + G+SA++SL  R+S +  S+  +  F+T+TVN LDAT +  ++R+DL  
Sbjct  629   DVSMHNALWTLGGDSAIHSLTVRNSRI--SSEGDRTFRTLTVNKLDATGSDFVLRTDL--  684

Query  898   SVNQSDKLIVKNQLTGSNNSLSVDIQKVGNNNSGLNVDLITAPKGSNKEIFKASTQAIGF  957
               +++DK+ V ++ TGS+NSL+V + +   +  +LN+ L+TAP G++ E+FKA+T+  GF
Sbjct  685   --KNADKINVTEKATGSDNSLNVSFMNNPAQGQALNIPLVTAPAGTSAEMFKAGTRVTGF  742

Query  958   SNISPVISTKEDQEHTTWTLTGYKVAENTASSSAAKSYMSGNYKAFLTEVNNLNKRMGDL  1017
             S ++P +       +T W L G+K   + A+++ A S+M++ YK F+TEVNNLNKRMGDL
Sbjct  743   SRVTPTLHVDTSGGNTKWILDGFKAEADKAAAAKADSFMNAGYKNFMTEVNNLNKRMGDL  802

Query  1018  RDTNGEVGAWARIMsgagsasggysDNYTHVQIGVDKKHELDGLDLFTGLTMTYTDSHAS  1077
             RDTNG+ GAWARIMSGAGSA GGYSDNYTHVQ+G DKKHELDG+DLFTG+TMTYTDS A 
Sbjct  803   RDTNGDAGAWARIMSGAGSADGGYSDNYTHVQVGFDKKHELDGVDLFTGVTMTYTDSSAD  862

Query  1078  SNAFSGKTKSVGAGLYASAIFDSGAYIDLISKYVHHDNEYSATFAGLGTKDYSSHSLYVG  1137
             S+AFSGKTKSVG+GLYASA+F+SGAYIDLI+KY+HHDN+Y++ FA+LGTK+Y++HS Y G
Sbjct  863   SHAFSGKTKSVGGGLYASALFESGAYIDLIGKYIHHDNDYTGNFASLGTKHYNTHSWYAG  922

Query  1138  AEAGYRYHVTEDSWIEPQAELVYGAVSGKRFDWQDRGMSVTMKDKDFNPLIGRTGVDVGK  1197
             AE+GYRYH+TED+ IEPQAELVYGAVSGK F W+D +M ++MK++DF+PL+GRTGV++GK
Sbjct  923   AETGYRYHLTEDTFIEPQAELVYGAVSGKTFRWKDGDMDLSMKNRDFSPLVGRTGVELGK  982

Query  1198  SFSGKDWKVTARAGLGYQFDLFANGETVLRDASGEKRIKGEKDGRILMNVGLNAEIRDNL  1257
             +FSGKDW VTARAG + QFDL+ NGETVLRDASGEKRIKGEKD+R+L NVG+NA+I+DN+
Sbjct  983   TFSGKDWSVTARAGTSWQFDLLNNGETVLRDASGEKRIKGEKDSRMLFNVGMNAQIKDNM  1042

Query  1258  RFGLEFEKSAFGKYNVDNAINANFRYSF  1285
             RFGLEFEKSAFGKYNVDNA+NANFRY F
Sbjct  1043  RFGLEFEKSAFGKYNVDNAVNANFRYMF  1070

54) sigA in NC_007613


> NC_004741_P1|8|G6|30064293|NP_838464.1|Shigella_flexneri_2a_str._2457T|-|15275..18487|pic|S3178|serine 
protease precurser
Length=1070

 Score =  600 bits (2268),  Expect = 1e-172, Method: Compositional matrix adjust.
 Identities = 442/1048 (43%), Positives = 683/1048 (66%), Gaps = 94/1048 (8%)

Query  315   LDGKKQELSSIIKDKDLSVSG-GGELTLKQDTDLGIGGLIFDKNQTYKVYG-KDKSYKGA  372
             ++G+K++   +  +K+L  SG  G + LK+    G G L F  +++Y V +  +K+  GA
Sbjct  40    MHGQKDN--DLNAGKNLVFSGQNGAIILKDSVTQGAGYLEF--KDSYTVSAESGKTWTGA  95

Query  373   GIDIDNNTTVEWNVKGVAGDNLHKIGSGTLDVKIA--QGNNLKIGNGTVILSAE------  424
             GI  D+ T V W+V+GVAGDNLHK+G GTL ++ +  +   LK G+G V+L+ +      
Sbjct  96    GIITDKGTNVTWKVNGVAGDNLHKLGEGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGN  155

Query  425   -KAFNKIYMAGGKGTVKINAKDALSESGNGEIYFTRNGGTLDLNGYDQSFQKIAATDAGT  483
              +AF+ + +A+G+ TV +       +   ++I     GG LDLNG   +F ++ A+D G+
Sbjct  156   IQAFSSVNLASGRPTVVLGDA---RQVNPDNISWGYRGGKLDLNGNAVTFTRLQAADYGA  212

Query  484   TVTNSNVKQST--LSLTNTDAYMYHGNVSGNIS----------INHIINTTQQH------  525
              +TN+  ++S   L L   D+ + +  + GNIS          +  +I  +Q +      
Sbjct  213   VITNNAQQKSQLLLDLKAQDTNVSEPTI-GNISPFGGTGTPGNLYSMILNSQTRFYILKS  271

Query  526   ------------NNNANLIFDGSVDIKNDISVRNAQLTLQGHATEHAIFKE---GNNNCP  570
                         N+ A+  F G    K   +V++    L G+A +  IF     GN + +
Sbjct  272   ASYGNTLWGNSLNDPAQWEFVGMNKNKAVQTVKDR--ILAGRAKQPVIFHGQLTGNMDVA  329

Query  571   IPFLCQKD---YSAAIKDQESTVNKRYNT-EYKSNNQI---------ASFSQPDWESRKF  617
             IP +       + ++++  E+T+++   T  ++++  I          S++Q DWE+R+F
Sbjct  330   IPQVPGGRKVIFDGSVNLPEGTLSQDSGTLIFQGHPVIHASISGSAPVSLNQKDWENRQF  389

Query  618   NFRKLNLENATLSIGRDANVKGHIEAKNSQIVLGNKTAYIDMFSGRN---ITGEGFGFRQ  674
               + L+L +A + ++R+A+++++I + NS+I LG+  A++D   G     I  EG +  +
Sbjct  390   TMKTLSLKDADFHLSRNASLNSDIKSDNSHITLGSDRAFVDKNDGTGNYVIPEEGTSVPD  449

Query  675   QL-------------RSGDSAGESSFNGSLSAQNSKITVGDKSTVTMTGALSLINTDLII  721
              +             +++     S F G++ A +S +++   + V +T++ ++  + L +
Sbjct  450   TVNDRSQYEGNITLNHNSALDIGSRFTGGIDAYDSAVSI-TSPDVLLTAPGAFAGSSLTV  508

Query  722   NKGATVTAQGKMYVDKAIELAgtl----tltgtptENNKYSPAIYMSDGYNMTEDGATLK  777
             + G+ +TA   ++ D  I+ +       + T      N+Y+PA+Y++DGY++T D A+L 
Sbjct  509   HDGGHLTALNGLFSDGHIQAGKNGKITLSGTPVKDTANQYAPAVYLTDGYDLTGDNAALE  568

Query  778   AQNYAWVNGNIKSDKKASILFGVDQYKEDNLDKTTHTPLATGLLGGFDTSYTGGIDAPAA  837
                 A  +G+I +   +++ +G D   E     T+ +++A +LL G+++++ G+I +  A
Sbjct  569   ITRGAHASGDIHASAASTVTIGSDTPAELASAETAASAFAGSLLEGYNAAFNGAITGGRA  628

Query  838   SASMYNTLWRVNGQSALQSLKTRDSLLLFSNIENSGFHTVTVNTLDATNTAVIMRADLSQ  897
               SM N+LW + G+SA++SL  R+S +  S+  +  F+T+TVN LDAT +  ++R+DL  
Sbjct  629   DVSMHNALWTLGGDSAIHSLTVRNSRI--SSEGDRTFRTLTVNKLDATGSDFVLRTDL--  684

Query  898   SVNQSDKLIVKNQLTGSNNSLSVDIQKVGNNNSGLNVDLITAPKGSNKEIFKASTQAIGF  957
               +++DK+ V ++ TGS+NSL+V + +   +  +LN+ L+TAP G++ E+FKA+T+  GF
Sbjct  685   --KNADKINVTEKATGSDNSLNVSFMNNPAQGQALNIPLVTAPAGTSAEMFKAGTRVTGF  742

Query  958   SNISPVISTKEDQEHTTWTLTGYKVAENTASSSAAKSYMSGNYKAFLTEVNNLNKRMGDL  1017
             S ++P +       +T W L G+K   + A+++ A S+M++ YK F+TEVNNLNKRMGDL
Sbjct  743   SRVTPTLHVDTSGGNTKWILDGFKAEADKAAAAKADSFMNAGYKNFMTEVNNLNKRMGDL  802

Query  1018  RDTNGEVGAWARIMsgagsasggysDNYTHVQIGVDKKHELDGLDLFTGLTMTYTDSHAS  1077
             RDTNG+ GAWARIMSGAGSA GGYSDNYTHVQ+G DKKHELDG+DLFTG+TMTYTDS A 
Sbjct  803   RDTNGDAGAWARIMSGAGSADGGYSDNYTHVQVGFDKKHELDGVDLFTGVTMTYTDSSAD  862

Query  1078  SNAFSGKTKSVGAGLYASAIFDSGAYIDLISKYVHHDNEYSATFAGLGTKDYSSHSLYVG  1137
             S+AFSGKTKSVG+GLYASA+F+SGAYIDLI+KY+HHDN+Y++ FA+LGTK+Y++HS Y G
Sbjct  863   SHAFSGKTKSVGGGLYASALFESGAYIDLIGKYIHHDNDYTGNFASLGTKHYNTHSWYAG  922

Query  1138  AEAGYRYHVTEDSWIEPQAELVYGAVSGKRFDWQDRGMSVTMKDKDFNPLIGRTGVDVGK  1197
             AE+GYRYH+TED+ IEPQAELVYGAVSGK F W+D +M ++MK++DF+PL+GRTGV++GK
Sbjct  923   AETGYRYHLTEDTFIEPQAELVYGAVSGKTFRWKDGDMDLSMKNRDFSPLVGRTGVELGK  982

Query  1198  SFSGKDWKVTARAGLGYQFDLFANGETVLRDASGEKRIKGEKDGRILMNVGLNAEIRDNL  1257
             +FSGKDW VTARAG + QFDL+ NGETVLRDASGEKRIKGEKD+R+L NVG+NA+I+DN+
Sbjct  983   TFSGKDWSVTARAGTSWQFDLLNNGETVLRDASGEKRIKGEKDSRMLFNVGMNAQIKDNM  1042

Query  1258  RFGLEFEKSAFGKYNVDNAINANFRYSF  1285
             RFGLEFEKSAFGKYNVDNA+NANFRY F
Sbjct  1043  RFGLEFEKSAFGKYNVDNAVNANFRYMF  1070

55) SbBS512_E4650 in NC_010658


> NC_004741_P1|8|G6|30064293|NP_838464.1|Shigella_flexneri_2a_str._2457T|-|15275..18487|pic|S3178|serine 
protease precurser
Length=1070

 Score =  600 bits (2267),  Expect = 2e-172, Method: Compositional matrix adjust.
 Identities = 442/1048 (43%), Positives = 683/1048 (66%), Gaps = 94/1048 (8%)

Query  315   LDGKKQELSSIIKDKDLSVSG-GGELTLKQDTDLGIGGLIFDKNQTYKVYG-KDKSYKGA  372
             ++G+K++   +  +K+L  SG  G + LK+    G G L F  +++Y V +  +K+  GA
Sbjct  40    MHGQKDN--DLNAGKNLVFSGQNGAIILKDSVTQGAGYLEF--KDSYTVSAESGKTWTGA  95

Query  373   GIDIDNNTTVEWNVKGVAGDNLHKIGSGTLDVKIA--QGNNLKIGNGTVILSAE------  424
             GI  D+ T V W+V+GVAGDNLHK+G GTL ++ +  +   LK G+G V+L+ +      
Sbjct  96    GIITDKGTNVTWKVNGVAGDNLHKLGEGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGN  155

Query  425   -KAFNKIYMAGGKGTVKINAKDALSESGNGEIYFTRNGGTLDLNGYDQSFQKIAATDAGT  483
              +AF+ + +A+G+ TV +       +   ++I     GG LDLNG   +F ++ A+D G+
Sbjct  156   IQAFSSVNLASGRPTVVLGDA---RQVNPDNISWGYRGGKLDLNGNAVTFTRLQAADYGA  212

Query  484   TVTNSNVKQST--LSLTNTDAYMYHGNVSGNIS----------INHIINTTQQH------  525
              +TN+  ++S   L L   D+ + +  + GNIS          +  +I  +Q +      
Sbjct  213   VITNNAQQKSQLLLDLKAQDTNVSEPTI-GNISPFGGTGTPGNLYSMILNSQTRFYILKS  271

Query  526   ------------NNNANLIFDGSVDIKNDISVRNAQLTLQGHATEHAIFKE---GNNNCP  570
                         N+ A+  F G    K   +V++    L G+A +  IF     GN + +
Sbjct  272   ASYGNTLWGNSLNDPAQWEFVGMNKNKAVQTVKDR--ILAGRAKQPVIFHGQLTGNMDVA  329

Query  571   IPFLCQKD---YSAAIKDQESTVNKRYNT-EYKSNNQI---------ASFSQPDWESRKF  617
             IP +       + ++++  E+T+++   T  ++++  I          S++Q DWE+R+F
Sbjct  330   IPQVPGGRKVIFDGSVNLPEGTLSQDSGTLIFQGHPVIHASISGSAPVSLNQKDWENRQF  389

Query  618   NFRKLNLENATLSIGRDANVKGHIEAKNSQIVLGNKTAYIDMFSGRN---ITGEGFGFRQ  674
               + L+L +A + ++R+A+++++I + NS+I LG+  A++D   G     I  EG +  +
Sbjct  390   TMKTLSLKDADFHLSRNASLNSDIKSDNSHITLGSDRAFVDKNDGTGNYVIPEEGTSVPD  449

Query  675   QL-------------RSGDSAGESSFNGSLSAQNSKITVGDKSTVTMTGALSLINTDLII  721
              +             +++     S F G++ A +S +++   + V +T++ ++  + L +
Sbjct  450   TVNDRSQYEGNITLNHNSALDIGSRFTGGIDAYDSAVSI-TSPDVLLTAPGAFAGSSLTV  508

Query  722   NKGATVTAQGKMYVDKAIELAgtl----tltgtptENNKYSPAIYMSDGYNMTEDGATLK  777
             + G+ +TA   ++ D  I+ +       + T      N+Y+PA+Y++DGY++T D A+L 
Sbjct  509   HDGGHLTALNGLFSDGHIQAGKNGKITLSGTPVKDTANQYAPAVYLTDGYDLTGDNAALE  568

Query  778   AQNYAWVNGNIKSDKKASILFGVDQYKEDNLDKTTHTPLATGLLGGFDTSYTGGIDAPAA  837
                 A  +G+I +   +++ +G D   E     T+ +++A +LL G+++++ G+I +  A
Sbjct  569   ITRGAHASGDIHASAASTVTIGSDTPAELASAETAASAFAGSLLEGYNAAFNGAITGGRA  628

Query  838   SASMYNTLWRVNGQSALQSLKTRDSLLLFSNIENSGFHTVTVNTLDATNTAVIMRADLSQ  897
               SM N+LW + G+SA++SL  R+S +  S+  +  F+T+TVN LDAT +  ++R+DL  
Sbjct  629   DVSMHNALWTLGGDSAIHSLTVRNSRI--SSEGDRTFRTLTVNKLDATGSDFVLRTDL--  684

Query  898   SVNQSDKLIVKNQLTGRNNSLSVDIQKVGNNNSGLNVDLITAPKGSNKEIFKASTQAIGF  957
               +++DK+ V ++ TG +NSL+V + +   +  +LN+ L+TAP G++ E+FKA+T+  GF
Sbjct  685   --KNADKINVTEKATGSDNSLNVSFMNNPAQGQALNIPLVTAPAGTSAEMFKAGTRVTGF  742

Query  958   SNISPVISTKEDQEHTTWTLTGYKVAENTASSSAAKSYMSGNYKAFLTEVNNLNKRMGDL  1017
             S ++P +       +T W L G+K   + A+++ A S+M++ YK F+TEVNNLNKRMGDL
Sbjct  743   SRVTPTLHVDTSGGNTKWILDGFKAEADKAAAAKADSFMNAGYKNFMTEVNNLNKRMGDL  802

Query  1018  RDTNGEAGAWARIMsgagsasggysDNYTHVQIGVDKKHELDGLDLFTGLTMTYTDSHAS  1077
             RDTNG+AGAWARIMSGAGSA GGYSDNYTHVQ+G DKKHELDG+DLFTG+TMTYTDS A 
Sbjct  803   RDTNGDAGAWARIMSGAGSADGGYSDNYTHVQVGFDKKHELDGVDLFTGVTMTYTDSSAD  862

Query  1078  SNAFSGKTKSVGAGLYASAIFDSGAYIDLISKYVHHDNEYSATFAGLGTKDYSSHSLYVG  1137
             S+AFSGKTKSVG+GLYASA+F+SGAYIDLI+KY+HHDN+Y++ FA+LGTK+Y++HS Y G
Sbjct  863   SHAFSGKTKSVGGGLYASALFESGAYIDLIGKYIHHDNDYTGNFASLGTKHYNTHSWYAG  922

Query  1138  AEAGYRYHVTEDSWIEPQAELVYGAVSGKRFDWQDRGMSVTMKDKDFNPLIGRTGVDVGK  1197
             AE+GYRYH+TED+ IEPQAELVYGAVSGK F W+D +M ++MK++DF+PL+GRTGV++GK
Sbjct  923   AETGYRYHLTEDTFIEPQAELVYGAVSGKTFRWKDGDMDLSMKNRDFSPLVGRTGVELGK  982

Query  1198  SFSGKDWKVTARAGLGYQFDLFANGETVLRDASGEKRIKGEKDGRILMNVGLNAEIRDNL  1257
             +FSGKDW VTARAG + QFDL+ NGETVLRDASGEKRIKGEKD+R+L NVG+NA+I+DN+
Sbjct  983   TFSGKDWSVTARAGTSWQFDLLNNGETVLRDASGEKRIKGEKDSRMLFNVGMNAQIKDNM  1042

Query  1258  RFGLEFEKSAFGKYNVDNAINANFRYSF  1285
             RFGLEFEKSAFGKYNVDNA+NANFRY F
Sbjct  1043  RFGLEFEKSAFGKYNVDNAVNANFRYMF  1070

56) SSON53_18280 in NC_016822


> NC_004741_P1|8|G6|30064293|NP_838464.1|Shigella_flexneri_2a_str._2457T|-|15275..18487|pic|S3178|serine 
protease precurser
Length=1070

 Score =  600 bits (2268),  Expect = 2e-172, Method: Compositional matrix adjust.
 Identities = 442/1048 (43%), Positives = 684/1048 (66%), Gaps = 94/1048 (8%)

Query  315   LDGKKQELSSIIKDKDLSVSG-GGELTLKQDTDLGIGGLIFDKNQTYKVYG-KDKSYKGA  372
             ++G+K++   +  +K+L  SG  G + LK+    G G L F  +++Y V +  +K+  GA
Sbjct  40    MHGQKDN--DLNAGKNLVFSGQNGAIILKDSVTQGAGYLEF--KDSYTVSAESGKTWTGA  95

Query  373   GIDIDNNTTVEWNVKGVAGDNLHKIGSGTLDVKIA--QGNNLKIGNGTVILSAE------  424
             GI  D+ T V W+V+GVAGDNLHK+G GTL ++ +  +   LK G+G V+L+ +      
Sbjct  96    GIITDKGTNVTWKVNGVAGDNLHKLGEGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGN  155

Query  425   -KAFNKIYMAGGKGTVKINAKDALSESGNGEIYFTRNGGTLDLNGYDQSFQKIAATDAGT  483
              +AF+ + +A+G+ TV +       +   ++I     GG LDLNG   +F ++ A+D G+
Sbjct  156   IQAFSSVNLASGRPTVVLGDA---RQVNPDNISWGYRGGKLDLNGNAVTFTRLQAADYGA  212

Query  484   TVTNSNVKQST--LSLTNTDAYMYHGNVSGNIS----------INHIINTTQQH------  525
              +TN+  ++S   L L   D+ + +  + GNIS          +  +I  +Q +      
Sbjct  213   VITNNAQQKSQLLLDLKAQDTNVSEPTI-GNISPFGGTGTPGNLYSMILNSQTRFYILKS  271

Query  526   ------------NNNANLIFDGSVDIKNDISVRNAQLTLQGHATEHAIFKE---GNNNCP  570
                         N+ A+  F G    K   +V++    L G+A +  IF     GN + +
Sbjct  272   ASYGNTLWGNSLNDPAQWEFVGMNKNKAVQTVKDR--ILAGRAKQPVIFHGQLTGNMDVA  329

Query  571   IPFLCQKD---YSAAIKDQESTVNKRYNT-EYKSNNQI---------ASFSQPDWESRKF  617
             IP +       + ++++  E+T+++   T  ++++  I          S++Q DWE+R+F
Sbjct  330   IPQVPGGRKVIFDGSVNLPEGTLSQDSGTLIFQGHPVIHASISGSAPVSLNQKDWENRQF  389

Query  618   NFRKLNLENATLSIGRDANVKGHIEAKNSQIVLGNKTAYIDMFSGRN---ITGEGFGFRQ  674
               + L+L +A + ++R+A+++++I + NS+I LG+  A++D   G     I  EG +  +
Sbjct  390   TMKTLSLKDADFHLSRNASLNSDIKSDNSHITLGSDRAFVDKNDGTGNYVIPEEGTSVPD  449

Query  675   QL-------------RSGDSAGESSFNGSLSAQNSKITVGDKSTVTMTGALSLINTDLII  721
              +             +++     S F G++ A +S +++   + V +T++ ++  + L +
Sbjct  450   TVNDRSQYEGNITLNHNSALDIGSRFTGGIDAYDSAVSI-TSPDVLLTAPGAFAGSSLTV  508

Query  722   NKGATVTAQGKMYVDKAIELAgtl----tltgtptENNKYSPAIYMSDGYNMTEDGATLK  777
             + G+ +TA   ++ D  I+ +       + T      N+Y+PA+Y++DGY++T D A+L 
Sbjct  509   HDGGHLTALNGLFSDGHIQAGKNGKITLSGTPVKDTANQYAPAVYLTDGYDLTGDNAALE  568

Query  778   AQNYAWVNGNIKSDKKASILFGVDQYKEDNLDKTTHTPLATGLLGGFDTSYTGGIDAPAA  837
                 A  +G+I +   +++ +G D   E     T+ +++A +LL G+++++ G+I +  A
Sbjct  569   ITRGAHASGDIHASAASTVTIGSDTPAELASAETAASAFAGSLLEGYNAAFNGAITGGRA  628

Query  838   SASMYNTLWRVNGQSALQSLKTRDSLLLFSNIENSGFHTVTVNTLDATNTAVIMRADLSQ  897
               SM N+LW + G+SA++SL  R+S +  S+  +  F+T+TVN LDAT +  ++R+DL  
Sbjct  629   DVSMHNALWTLGGDSAIHSLTVRNSRI--SSEGDRTFRTLTVNKLDATGSDFVLRTDL--  684

Query  898   SVNQSDKLIVKNQLTGSNNSLSVDIQKVGNNNSGLNVDLITAPKGSNKEIFKASTQAIGF  957
               +++DK+ V ++ TGS+NSL+V + +   +  +LN+ L+TAP G++ E+FKA+T+  GF
Sbjct  685   --KNADKINVTEKATGSDNSLNVSFMNNPAQGQALNIPLVTAPAGTSAEMFKAGTRVTGF  742

Query  958   SNISPVISTKEDQEHTTWTLTGYKVAENTASSGAAKSYMSGNYKAFLTEVNNLNKRMGDL  1017
             S ++P +       +T W L G+K   + A+++ A S+M++ YK F+TEVNNLNKRMGDL
Sbjct  743   SRVTPTLHVDTSGGNTKWILDGFKAEADKAAAAKADSFMNAGYKNFMTEVNNLNKRMGDL  802

Query  1018  RDTNGEAGAWARIMsgagsassgysDNYTHVQIGVDKKHELDGLDLFTGLTMTYTDSHAS  1077
             RDTNG+AGAWARIMSGAGSA +GYSDNYTHVQ+G DKKHELDG+DLFTG+TMTYTDS A 
Sbjct  803   RDTNGDAGAWARIMSGAGSADGGYSDNYTHVQVGFDKKHELDGVDLFTGVTMTYTDSSAD  862

Query  1078  SNAFSGKTKSVGAGLYASAIFDSGAYIDLISKYVHHDNEYSATFAGLGTKDYSSHSLYVG  1137
             S+AFSGKTKSVG+GLYASA+F+SGAYIDLI+KY+HHDN+Y++ FA+LGTK+Y++HS Y G
Sbjct  863   SHAFSGKTKSVGGGLYASALFESGAYIDLIGKYIHHDNDYTGNFASLGTKHYNTHSWYAG  922

Query  1138  AEAGYRYHVTEDSWIEPQAELVYGAVSGKRFDWQDRGMSVTMKDKDFNPLIGRTGVDVGK  1197
             AE+GYRYH+TED+ IEPQAELVYGAVSGK F W+D +M ++MK++DF+PL+GRTGV++GK
Sbjct  923   AETGYRYHLTEDTFIEPQAELVYGAVSGKTFRWKDGDMDLSMKNRDFSPLVGRTGVELGK  982

Query  1198  SFSGKDWKVTARAGLGYQFDLFANGETVLRDASGEKRIKGEKDGRILMNVGLNAEIRDNL  1257
             +FSGKDW VTARAG + QFDL+ NGETVLRDASGEKRIKGEKD+R+L NVG+NA+I+DN+
Sbjct  983   TFSGKDWSVTARAGTSWQFDLLNNGETVLRDASGEKRIKGEKDSRMLFNVGMNAQIKDNM  1042

Query  1258  RFGLEFEKSAFGKYNVDNAINANFRYSF  1285
             RFGLEFEKSAFGKYNVDNA+NANFRY F
Sbjct  1043  RFGLEFEKSAFGKYNVDNAVNANFRYMF  1070

57) sigA in NC_007384


> NC_004741_P1|8|G6|30064293|NP_838464.1|Shigella_flexneri_2a_str._2457T|-|15275..18487|pic|S3178|serine 
protease precurser
Length=1070

 Score =  600 bits (2268),  Expect = 2e-172, Method: Compositional matrix adjust.
 Identities = 442/1048 (43%), Positives = 684/1048 (66%), Gaps = 94/1048 (8%)

Query  315   LDGKKQELSSIIKDKDLSVSG-GGELTLKQDTDLGIGGLIFDKNQTYKVYG-KDKSYKGA  372
             ++G+K++   +  +K+L  SG  G + LK+    G G L F  +++Y V +  +K+  GA
Sbjct  40    MHGQKDN--DLNAGKNLVFSGQNGAIILKDSVTQGAGYLEF--KDSYTVSAESGKTWTGA  95

Query  373   GIDIDNNTTVEWNVKGVAGDNLHKIGSGTLDVKIA--QGNNLKIGNGTVILSAE------  424
             GI  D+ T V W+V+GVAGDNLHK+G GTL ++ +  +   LK G+G V+L+ +      
Sbjct  96    GIITDKGTNVTWKVNGVAGDNLHKLGEGTLTINGTGVNPGGLKTGDGIVVLNQQADTAGN  155

Query  425   -KAFNKIYMAGGKGTVKINAKDALSESGNGEIYFTRNGGTLDLNGYDQSFQKIAATDAGT  483
              +AF+ + +A+G+ TV +       +   ++I     GG LDLNG   +F ++ A+D G+
Sbjct  156   IQAFSSVNLASGRPTVVLGDA---RQVNPDNISWGYRGGKLDLNGNAVTFTRLQAADYGA  212

Query  484   TVTNSNVKQST--LSLTNTDAYMYHGNVSGNIS----------INHIINTTQQH------  525
              +TN+  ++S   L L   D+ + +  + GNIS          +  +I  +Q +      
Sbjct  213   VITNNAQQKSQLLLDLKAQDTNVSEPTI-GNISPFGGTGTPGNLYSMILNSQTRFYILKS  271

Query  526   ------------NNNANLIFDGSVDIKNDISVRNAQLTLQGHATEHAIFKE---GNNNCP  570
                         N+ A+  F G    K   +V++    L G+A +  IF     GN + +
Sbjct  272   ASYGNTLWGNSLNDPAQWEFVGMNKNKAVQTVKDR--ILAGRAKQPVIFHGQLTGNMDVA  329

Query  571   IPFLCQKD---YSAAIKDQESTVNKRYNT-EYKSNNQI---------ASFSQPDWESRKF  617
             IP +       + ++++  E+T+++   T  ++++  I          S++Q DWE+R+F
Sbjct  330   IPQVPGGRKVIFDGSVNLPEGTLSQDSGTLIFQGHPVIHASISGSAPVSLNQKDWENRQF  389

Query  618   NFRKLNLENATLSIGRDANVKGHIEAKNSQIVLGNKTAYIDMFSGRN---ITGEGFGFRQ  674
               + L+L +A + ++R+A+++++I + NS+I LG+  A++D   G     I  EG +  +
Sbjct  390   TMKTLSLKDADFHLSRNASLNSDIKSDNSHITLGSDRAFVDKNDGTGNYVIPEEGTSVPD  449

Query  675   QL-------------RSGDSAGESSFNGSLSAQNSKITVGDKSTVTMTGALSLINTDLII  721
              +             +++     S F G++ A +S +++   + V +T++ ++  + L +
Sbjct  450   TVNDRSQYEGNITLNHNSALDIGSRFTGGIDAYDSAVSI-TSPDVLLTAPGAFAGSSLTV  508

Query  722   NKGATVTAQGKMYVDKAIELAgtl----tltgtptENNKYSPAIYMSDGYNMTEDGATLK  777
             + G+ +TA   ++ D  I+ +       + T      N+Y+PA+Y++DGY++T D A+L 
Sbjct  509   HDGGHLTALNGLFSDGHIQAGKNGKITLSGTPVKDTANQYAPAVYLTDGYDLTGDNAALE  568

Query  778   AQNYAWVNGNIKSDKKASILFGVDQYKEDNLDKTTHTPLATGLLGGFDTSYTGGIDAPAA  837
                 A  +G+I +   +++ +G D   E     T+ +++A +LL G+++++ G+I +  A
Sbjct  569   ITRGAHASGDIHASAASTVTIGSDTPAELASAETAASAFAGSLLEGYNAAFNGAITGGRA  628

Query  838   SASMYNTLWRVNGQSALQSLKTRDSLLLFSNIENSGFHTVTVNTLDATNTAVIMRADLSQ  897
               SM N+LW + G+SA++SL  R+S +  S+  +  F+T+TVN LDAT +  ++R+DL  
Sbjct  629   DVSMHNALWTLGGDSAIHSLTVRNSRI--SSEGDRTFRTLTVNKLDATGSDFVLRTDL--  684

Query  898   SVNQSDKLIVKNQLTGSNNSLSVDIQKVGNNNSGLNVDLITAPKGSNKEIFKASTQAIGF  957
               +++DK+ V ++ TGS+NSL+V + +   +  +LN+ L+TAP G++ E+FKA+T+  GF
Sbjct  685   --KNADKINVTEKATGSDNSLNVSFMNNPAQGQALNIPLVTAPAGTSAEMFKAGTRVTGF  742

Query  958   SNISPVISTKEDQEHTTWTLTGYKVAENTASSGAAKSYMSGNYKAFLTEVNNLNKRMGDL  1017
             S ++P +       +T W L G+K   + A+++ A S+M++ YK F+TEVNNLNKRMGDL
Sbjct  743   SRVTPTLHVDTSGGNTKWILDGFKAEADKAAAAKADSFMNAGYKNFMTEVNNLNKRMGDL  802

Query  1018  RDTNGEAGAWARIMsgagsassgysDNYTHVQIGVDKKHELDGLDLFTGLTMTYTDSHAS  1077
             RDTNG+AGAWARIMSGAGSA +GYSDNYTHVQ+G DKKHELDG+DLFTG+TMTYTDS A 
Sbjct  803   RDTNGDAGAWARIMSGAGSADGGYSDNYTHVQVGFDKKHELDGVDLFTGVTMTYTDSSAD  862

Query  1078  SNAFSGKTKSVGAGLYASAIFDSGAYIDLISKYVHHDNEYSATFAGLGTKDYSSHSLYVG  1137
             S+AFSGKTKSVG+GLYASA+F+SGAYIDLI+KY+HHDN+Y++ FA+LGTK+Y++HS Y G
Sbjct  863   SHAFSGKTKSVGGGLYASALFESGAYIDLIGKYIHHDNDYTGNFASLGTKHYNTHSWYAG  922

Query  1138  AEAGYRYHVTEDSWIEPQAELVYGAVSGKRFDWQDRGMSVTMKDKDFNPLIGRTGVDVGK  1197
             AE+GYRYH+TED+ IEPQAELVYGAVSGK F W+D +M ++MK++DF+PL+GRTGV++GK
Sbjct  923   AETGYRYHLTEDTFIEPQAELVYGAVSGKTFRWKDGDMDLSMKNRDFSPLVGRTGVELGK  982

Query  1198  SFSGKDWKVTARAGLGYQFDLFANGETVLRDASGEKRIKGEKDGRILMNVGLNAEIRDNL  1257
             +FSGKDW VTARAG + QFDL+ NGETVLRDASGEKRIKGEKD+R+L NVG+NA+I+DN+
Sbjct  983   TFSGKDWSVTARAGTSWQFDLLNNGETVLRDASGEKRIKGEKDSRMLFNVGMNAQIKDNM  1042

Query  1258  RFGLEFEKSAFGKYNVDNAINANFRYSF  1285
             RFGLEFEKSAFGKYNVDNA+NANFRY F
Sbjct  1043  RFGLEFEKSAFGKYNVDNAVNANFRYMF  1070