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Homologs of YPO0261 gene of NC_003143_P1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) YP_0415
( NP_991809.1 )

type III secretion apparatus

NC_005810
(Yersinia pestis 91001)

3e-31

100

2) A1122_03835
( YP_005520462.1 )

putative type III secretion apparatus

NC_017168
(Yersinia pestis A1122)

3e-31

100

3) YpAngola_A3939
( YP_001608237.1 )

type III secretion system protein SsaH family

NC_010159
(Yersinia pestis Angola)

3e-31

100

4) YPA_4022
( YP_653928.1 )

putative type III secretion apparatus

NC_008150
(Yersinia pestis Antiqua)

3e-31

100

5) YPO0261
( YP_002345342.1 )

type III secretion apparatus

NC_003143
(Yersinia pestis CO92)

3e-31

100

6) y0519
( NP_667857.1 )

hypothetical protein

NC_004088
(Yersinia pestis KIM)

3e-31

100

7) YPN_3408
( YP_649335.1 )

type III secretion apparatus

NC_008149
(Yersinia pestis Nepal516)

3e-31

100

8) YPDSF_3710
( YP_001165033.1 )

type III secretion apparatus

NC_009381
(Yersinia pestis Pestoides F)

3e-31

100

9) YpsIP31758_3825
( YP_001402779.1 )

type III secretion system protein SsaH family

NC_009708
(Yersinia pseudotuberculosis IP 31758)

3e-31

100

10) YPTB0317
( YP_068863.1 )

type III secretion apparatus

NC_006155
(Yersinia pseudotuberculosis IP 32953)

3e-31

100

11) YPTS_0341
( YP_001870787.1 )

SsaH family type III secretion system protein

NC_010634
(Yersinia pseudotuberculosis PB1/+)

3e-31

100

12) YPK_3912
( YP_001722630.1 )

SsaH family type III secretion system protein

NC_010465
(Yersinia pseudotuberculosis YPIII)

3e-31

100

13) YE105_C0325
( YP_004296526.1 )

type III secretion apparatus

NC_015224
(Yersinia enterocolitica 105.5R(r))

1e-17

14) Y11_35331
( YP_006007032.1 )

putative type III secretion apparatus

NC_017564
(Yersinia enterocolitica Y11)

1e-17

15) ssaH
( YP_002923057.1 )

type III secretion system apparatus protein

NC_012751
(Candidatus Hamiltonella defensa T5A)

1e-12

16) SG1293
( YP_454973.1 )

type III secretion apparatus

NC_007712
(Sodalis glossinidius morsitans)

2e-08

17) CV_2586
( NP_902256.1 )

type III secretion apparatus

NC_005085
(Chromobacterium violaceum ATCC 12472)

8e-07

• Sequence Alignments

1) A1122_03835 in NC_017168


> NC_003143_P1|8|G8|218927467|YP_002345342.1|Yersinia_pestis_CO92|+|7680..7928|-|YPO0261|type 
III secretion apparatus
Length=82

 Score =  128 bits (469),  Expect = 3e-31, Method: Compositional matrix adjust.
 Identities = 82/82 (100%), Positives = 82/82 (100%), Gaps = 0/82 (0%)

Query  1   MSLLSADCRQLVVEAALAGVNHSLLAEAHDIVNALPLLIPDPQVRLVCEAMLRFGLGDKV  60
           MSLLSADCRQLVVEAALAGVNHSLLAEAHDIVNALPLLIPDPQVRLVCEAMLRFGLGDKV
Sbjct  1   MSLLSADCRQLVVEAALAGVNHSLLAEAHDIVNALPLLIPDPQVRLVCEAMLRFGLGDKV  60

Query  61  QARALLATSGEEDAQILLGLLQ  82
           QARALLATSGEEDAQILLGLLQ
Sbjct  61  QARALLATSGEEDAQILLGLLQ  82

2) YpAngola_A3939 in NC_010159


> NC_003143_P1|8|G8|218927467|YP_002345342.1|Yersinia_pestis_CO92|+|7680..7928|-|YPO0261|type 
III secretion apparatus
Length=82

 Score =  128 bits (469),  Expect = 3e-31, Method: Compositional matrix adjust.
 Identities = 82/82 (100%), Positives = 82/82 (100%), Gaps = 0/82 (0%)

Query  1   MSLLSADCRQLVVEAALAGVNHSLLAEAHDIVNALPLLIPDPQVRLVCEAMLRFGLGDKV  60
           MSLLSADCRQLVVEAALAGVNHSLLAEAHDIVNALPLLIPDPQVRLVCEAMLRFGLGDKV
Sbjct  1   MSLLSADCRQLVVEAALAGVNHSLLAEAHDIVNALPLLIPDPQVRLVCEAMLRFGLGDKV  60

Query  61  QARALLATSGEEDAQILLGLLQ  82
           QARALLATSGEEDAQILLGLLQ
Sbjct  61  QARALLATSGEEDAQILLGLLQ  82

3) YPA_4022 in NC_008150


> NC_003143_P1|8|G8|218927467|YP_002345342.1|Yersinia_pestis_CO92|+|7680..7928|-|YPO0261|type 
III secretion apparatus
Length=82

 Score =  128 bits (469),  Expect = 3e-31, Method: Compositional matrix adjust.
 Identities = 82/82 (100%), Positives = 82/82 (100%), Gaps = 0/82 (0%)

Query  1   MSLLSADCRQLVVEAALAGVNHSLLAEAHDIVNALPLLIPDPQVRLVCEAMLRFGLGDKV  60
           MSLLSADCRQLVVEAALAGVNHSLLAEAHDIVNALPLLIPDPQVRLVCEAMLRFGLGDKV
Sbjct  1   MSLLSADCRQLVVEAALAGVNHSLLAEAHDIVNALPLLIPDPQVRLVCEAMLRFGLGDKV  60

Query  61  QARALLATSGEEDAQILLGLLQ  82
           QARALLATSGEEDAQILLGLLQ
Sbjct  61  QARALLATSGEEDAQILLGLLQ  82

4) YP_0415 in NC_005810


> NC_003143_P1|8|G8|218927467|YP_002345342.1|Yersinia_pestis_CO92|+|7680..7928|-|YPO0261|type 
III secretion apparatus
Length=82

 Score =  128 bits (469),  Expect = 3e-31, Method: Compositional matrix adjust.
 Identities = 82/82 (100%), Positives = 82/82 (100%), Gaps = 0/82 (0%)

Query  1   MSLLSADCRQLVVEAALAGVNHSLLAEAHDIVNALPLLIPDPQVRLVCEAMLRFGLGDKV  60
           MSLLSADCRQLVVEAALAGVNHSLLAEAHDIVNALPLLIPDPQVRLVCEAMLRFGLGDKV
Sbjct  1   MSLLSADCRQLVVEAALAGVNHSLLAEAHDIVNALPLLIPDPQVRLVCEAMLRFGLGDKV  60

Query  61  QARALLATSGEEDAQILLGLLQ  82
           QARALLATSGEEDAQILLGLLQ
Sbjct  61  QARALLATSGEEDAQILLGLLQ  82

5) YPO0261 in NC_003143


> NC_003143_P1|8|G8|218927467|YP_002345342.1|Yersinia_pestis_CO92|+|7680..7928|-|YPO0261|type 
III secretion apparatus
Length=82

 Score =  128 bits (469),  Expect = 3e-31, Method: Compositional matrix adjust.
 Identities = 82/82 (100%), Positives = 82/82 (100%), Gaps = 0/82 (0%)

Query  1   MSLLSADCRQLVVEAALAGVNHSLLAEAHDIVNALPLLIPDPQVRLVCEAMLRFGLGDKV  60
           MSLLSADCRQLVVEAALAGVNHSLLAEAHDIVNALPLLIPDPQVRLVCEAMLRFGLGDKV
Sbjct  1   MSLLSADCRQLVVEAALAGVNHSLLAEAHDIVNALPLLIPDPQVRLVCEAMLRFGLGDKV  60

Query  61  QARALLATSGEEDAQILLGLLQ  82
           QARALLATSGEEDAQILLGLLQ
Sbjct  61  QARALLATSGEEDAQILLGLLQ  82

6) y0519 in NC_004088


> NC_003143_P1|8|G8|218927467|YP_002345342.1|Yersinia_pestis_CO92|+|7680..7928|-|YPO0261|type 
III secretion apparatus
Length=82

 Score =  128 bits (469),  Expect = 3e-31, Method: Compositional matrix adjust.
 Identities = 82/82 (100%), Positives = 82/82 (100%), Gaps = 0/82 (0%)

Query  1   MSLLSADCRQLVVEAALAGVNHSLLAEAHDIVNALPLLIPDPQVRLVCEAMLRFGLGDKV  60
           MSLLSADCRQLVVEAALAGVNHSLLAEAHDIVNALPLLIPDPQVRLVCEAMLRFGLGDKV
Sbjct  1   MSLLSADCRQLVVEAALAGVNHSLLAEAHDIVNALPLLIPDPQVRLVCEAMLRFGLGDKV  60

Query  61  QARALLATSGEEDAQILLGLLQ  82
           QARALLATSGEEDAQILLGLLQ
Sbjct  61  QARALLATSGEEDAQILLGLLQ  82

7) YPN_3408 in NC_008149


> NC_003143_P1|8|G8|218927467|YP_002345342.1|Yersinia_pestis_CO92|+|7680..7928|-|YPO0261|type 
III secretion apparatus
Length=82

 Score =  128 bits (469),  Expect = 3e-31, Method: Compositional matrix adjust.
 Identities = 82/82 (100%), Positives = 82/82 (100%), Gaps = 0/82 (0%)

Query  1   MSLLSADCRQLVVEAALAGVNHSLLAEAHDIVNALPLLIPDPQVRLVCEAMLRFGLGDKV  60
           MSLLSADCRQLVVEAALAGVNHSLLAEAHDIVNALPLLIPDPQVRLVCEAMLRFGLGDKV
Sbjct  1   MSLLSADCRQLVVEAALAGVNHSLLAEAHDIVNALPLLIPDPQVRLVCEAMLRFGLGDKV  60

Query  61  QARALLATSGEEDAQILLGLLQ  82
           QARALLATSGEEDAQILLGLLQ
Sbjct  61  QARALLATSGEEDAQILLGLLQ  82

8) YPDSF_3710 in NC_009381


> NC_003143_P1|8|G8|218927467|YP_002345342.1|Yersinia_pestis_CO92|+|7680..7928|-|YPO0261|type 
III secretion apparatus
Length=82

 Score =  128 bits (469),  Expect = 3e-31, Method: Compositional matrix adjust.
 Identities = 82/82 (100%), Positives = 82/82 (100%), Gaps = 0/82 (0%)

Query  1   MSLLSADCRQLVVEAALAGVNHSLLAEAHDIVNALPLLIPDPQVRLVCEAMLRFGLGDKV  60
           MSLLSADCRQLVVEAALAGVNHSLLAEAHDIVNALPLLIPDPQVRLVCEAMLRFGLGDKV
Sbjct  1   MSLLSADCRQLVVEAALAGVNHSLLAEAHDIVNALPLLIPDPQVRLVCEAMLRFGLGDKV  60

Query  61  QARALLATSGEEDAQILLGLLQ  82
           QARALLATSGEEDAQILLGLLQ
Sbjct  61  QARALLATSGEEDAQILLGLLQ  82

9) YpsIP31758_3825 in NC_009708


> NC_003143_P1|8|G8|218927467|YP_002345342.1|Yersinia_pestis_CO92|+|7680..7928|-|YPO0261|type 
III secretion apparatus
Length=82

 Score =  128 bits (469),  Expect = 3e-31, Method: Compositional matrix adjust.
 Identities = 82/82 (100%), Positives = 82/82 (100%), Gaps = 0/82 (0%)

Query  1   MSLLSADCRQLVVEAALAGVNHSLLAEAHDIVNALPLLIPDPQVRLVCEAMLRFGLGDKV  60
           MSLLSADCRQLVVEAALAGVNHSLLAEAHDIVNALPLLIPDPQVRLVCEAMLRFGLGDKV
Sbjct  1   MSLLSADCRQLVVEAALAGVNHSLLAEAHDIVNALPLLIPDPQVRLVCEAMLRFGLGDKV  60

Query  61  QARALLATSGEEDAQILLGLLQ  82
           QARALLATSGEEDAQILLGLLQ
Sbjct  61  QARALLATSGEEDAQILLGLLQ  82

10) YPTB0317 in NC_006155


> NC_003143_P1|8|G8|218927467|YP_002345342.1|Yersinia_pestis_CO92|+|7680..7928|-|YPO0261|type 
III secretion apparatus
Length=82

 Score =  128 bits (469),  Expect = 3e-31, Method: Compositional matrix adjust.
 Identities = 82/82 (100%), Positives = 82/82 (100%), Gaps = 0/82 (0%)

Query  1   MSLLSADCRQLVVEAALAGVNHSLLAEAHDIVNALPLLIPDPQVRLVCEAMLRFGLGDKV  60
           MSLLSADCRQLVVEAALAGVNHSLLAEAHDIVNALPLLIPDPQVRLVCEAMLRFGLGDKV
Sbjct  1   MSLLSADCRQLVVEAALAGVNHSLLAEAHDIVNALPLLIPDPQVRLVCEAMLRFGLGDKV  60

Query  61  QARALLATSGEEDAQILLGLLQ  82
           QARALLATSGEEDAQILLGLLQ
Sbjct  61  QARALLATSGEEDAQILLGLLQ  82

11) YPTS_0341 in NC_010634


> NC_003143_P1|8|G8|218927467|YP_002345342.1|Yersinia_pestis_CO92|+|7680..7928|-|YPO0261|type 
III secretion apparatus
Length=82

 Score =  128 bits (469),  Expect = 3e-31, Method: Compositional matrix adjust.
 Identities = 82/82 (100%), Positives = 82/82 (100%), Gaps = 0/82 (0%)

Query  1   MSLLSADCRQLVVEAALAGVNHSLLAEAHDIVNALPLLIPDPQVRLVCEAMLRFGLGDKV  60
           MSLLSADCRQLVVEAALAGVNHSLLAEAHDIVNALPLLIPDPQVRLVCEAMLRFGLGDKV
Sbjct  1   MSLLSADCRQLVVEAALAGVNHSLLAEAHDIVNALPLLIPDPQVRLVCEAMLRFGLGDKV  60

Query  61  QARALLATSGEEDAQILLGLLQ  82
           QARALLATSGEEDAQILLGLLQ
Sbjct  61  QARALLATSGEEDAQILLGLLQ  82

12) YPK_3912 in NC_010465


> NC_003143_P1|8|G8|218927467|YP_002345342.1|Yersinia_pestis_CO92|+|7680..7928|-|YPO0261|type 
III secretion apparatus
Length=82

 Score =  128 bits (469),  Expect = 3e-31, Method: Compositional matrix adjust.
 Identities = 82/82 (100%), Positives = 82/82 (100%), Gaps = 0/82 (0%)

Query  1   MSLLSADCRQLVVEAALAGVNHSLLAEAHDIVNALPLLIPDPQVRLVCEAMLRFGLGDKV  60
           MSLLSADCRQLVVEAALAGVNHSLLAEAHDIVNALPLLIPDPQVRLVCEAMLRFGLGDKV
Sbjct  1   MSLLSADCRQLVVEAALAGVNHSLLAEAHDIVNALPLLIPDPQVRLVCEAMLRFGLGDKV  60

Query  61  QARALLATSGEEDAQILLGLLQ  82
           QARALLATSGEEDAQILLGLLQ
Sbjct  61  QARALLATSGEEDAQILLGLLQ  82

13) YE105_C0325 in NC_015224


> NC_003143_P1|8|G8|218927467|YP_002345342.1|Yersinia_pestis_CO92|+|7680..7928|-|YPO0261|type 
III secretion apparatus
Length=82

 Score = 83.4 bits (297),  Expect = 1e-17, Method: Compositional matrix adjust.
 Identities = 61/82 (75%), Positives = 70/82 (86%), Gaps = 0/82 (0%)

Query  1   MILLSAPCRQLVVEAALAGVNHSLLAEARDILNVLPQLIPDPQVRLVCEAMLLFGLNQQS  60
           M LLSA CRQLVVEAALAGVNHSLLAEA+DI+N LP LIPDPQVRLVCEAML FGL ++ 
Sbjct  1   MSLLSADCRQLVVEAALAGVNHSLLAEAHDIVNALPLLIPDPQVRLVCEAMLRFGLGDKV  60

Query  61  EalallassssPEAQGILVLLQ  82
           +A ALLA+S+  +AQ +L LLQ
Sbjct  61  QARALLATSGEEDAQILLGLLQ  82

14) Y11_35331 in NC_017564


> NC_003143_P1|8|G8|218927467|YP_002345342.1|Yersinia_pestis_CO92|+|7680..7928|-|YPO0261|type 
III secretion apparatus
Length=82

 Score = 83.4 bits (297),  Expect = 1e-17, Method: Compositional matrix adjust.
 Identities = 61/82 (75%), Positives = 70/82 (86%), Gaps = 0/82 (0%)

Query  1   MILLSAPCRQLVVEAALAGVNHSLLAEARDILNVLPQLIPDPQVRLVCEAMLLFGLNQQS  60
           M LLSA CRQLVVEAALAGVNHSLLAEA+DI+N LP LIPDPQVRLVCEAML FGL ++ 
Sbjct  1   MSLLSADCRQLVVEAALAGVNHSLLAEAHDIVNALPLLIPDPQVRLVCEAMLRFGLGDKV  60

Query  61  EalallassssPEAQGILVLLQ  82
           +A ALLA+S+  +AQ +L LLQ
Sbjct  61  QARALLATSGEEDAQILLGLLQ  82

15) ssaH in NC_012751


> NC_003143_P1|8|G8|218927467|YP_002345342.1|Yersinia_pestis_CO92|+|7680..7928|-|YPO0261|type 
III secretion apparatus
Length=82

 Score = 66.6 bits (233),  Expect = 1e-12, Method: Compositional matrix adjust.
 Identities = 38/77 (50%), Positives = 60/77 (78%), Gaps = 0/77 (0%)

Query  1   MTILSKSCRQLIVEAAIAGLNHNFCKESRAIMESLPFLVPDINVRLTCHALLLHGLGETQ  60
           M++LS  CRQL+VEAA+AG+NH++  E++ I+++LP+L+PD +VRL C+A+L  GLG+  
Sbjct  1   MSLLSADCRQLVVEAALAGVNHSLLAEAHDIVNALPLLIPDPQVRLVCEAMLRFGLGDKV  60

Query  61  KAINLLKDSSLEEAIVL  77
           +A  LL  S+ E+A +L
Sbjct  61  QARALLATSGEEDAQIL  77

16) SG1293 in NC_007712


> NC_003143_P1|8|G8|218927467|YP_002345342.1|Yersinia_pestis_CO92|+|7680..7928|-|YPO0261|type 
III secretion apparatus
Length=82

 Score = 52.4 bits (179),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 36/82 (44%), Positives = 55/82 (68%), Gaps = 0/82 (0%)

Query  1   MTMLSDTDRRLLVEIACAGVNHGYRPQVRAMLPALPCLIPDESLRAVCHAFLLFGLDEIA  60
           M++LS   R+L+VE A AGVNH+  ++ + ++ ALP LIPD  +R VC+A L FGL++  
Sbjct  1   MSLLSADCRQLVVEAALAGVNHSLLAEAHDIVNALPLLIPDPQVRLVCEAMLRFGLGDKV  60

Query  61  AARGCLAQVTGPEAETLKAILQ  82
            AR+ LA     +A+ L ++LQ
Sbjct  61  QARALLATSGEEDAQILLGLLQ  82

17) BTI_1931 in NC_021173


> NC_003143_P1|8|G8|218927467|YP_002345342.1|Yersinia_pestis_CO92|+|7680..7928|-|YPO0261|type 
III secretion apparatus
Length=82

 Score = 50.8 bits (173),  Expect = 7e-08, Method: Compositional matrix adjust.
 Identities = 36/75 (48%), Positives = 52/75 (70%), Gaps = 0/75 (0%)

Query  1   MTPLSAAARRLIVEAGLAAVNHGLHREAWAIHAALSALIPDAHDRLALEAVMLIGLGRSE  60
           M+ LSA  R+L+VEA+LA+VNH+L  EA  I  AL+ LIPD++ RL  EA++ +GLG   
Sbjct  1   MSLLSADCRQLVVEAALAGVNHSLLAEAHDIVNALPLLIPDPQVRLVCEAMLRFGLGDKV  60

Query  61  SAARLLERAGAQHAR  75
            A  LL  +G ++A+
Sbjct  61  QARALLATSGEEDAQ  75

18) CV_2586 in NC_005085


> NC_003143_P1|8|G8|218927467|YP_002345342.1|Yersinia_pestis_CO92|+|7680..7928|-|YPO0261|type 
III secretion apparatus
Length=82

 Score = 47.1 bits (159),  Expect = 8e-07, Method: Compositional matrix adjust.
 Identities = 35/83 (43%), Positives = 54/83 (66%), Gaps = 2/83 (2%)

Query  1   MKLLATDICR-LVVETGLAAVNHGLYDEADSIRLAMPHLTENTHARKIVEATLLLGMGHT  59
           M LL++D CR LVVE++LA+VNH+L  EA+ I  A+P L  + + R + EA L +G+G+ 
Sbjct  1   MSLLSAD-CRQLVVEAALAGVNHSLLAEAHDIVNALPLLIPDPQVRLVCEAMLRFGLGDK  59

Query  60  EAATSLLRNDHSEEAGMLRRLIN  82
             A +LL     E+A +L  L++
Sbjct  60  VQARALLATSGEEDAQILLGLLQ  82