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Homologs of VC0182 gene of NC_002505_P1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) amad1_21473
( YP_006979083.1 )

hypothetical protein

NC_019394
(Alteromonas macleodii AltDE1)

2e-22

2) I607_20187
( YP_008174026.1 )

hypothetical protein

NC_021711
(Alteromonas macleodii Ionian Sea U4)

2e-22

3) I635_21479
( YP_008198441.1 )

hypothetical protein

NC_021718
(Alteromonas macleodii Ionian Sea UM7)

2e-22

4) Sput200_4168
( YP_006011988.1 )

hypothetical protein

NC_017566
(Shewanella putrefaciens 200)

2e-18

5) Sden_3584
( YP_564582.1 )

hypothetical protein

NC_007954
(Shewanella denitrificans OS217)

2e-18

6) Sputw3181_3988
( YP_965346.1 )

hypothetical protein

NC_008750
(Shewanella sp. W3-18-1)

3e-18

7) XNC1_4304
( YP_003714400.1 )

hypothetical protein

NC_014228
(Xenorhabdus nematophila ATCC 19061)

6e-18

• Sequence Alignments

1) O3Y_00835 in NC_016944


> NC_002505_P1|8|G8|15640212|NP_229839.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|8615..9046|-|VC0182|hypothetical 
protein
Length=143

 Score =  226 bits (844),  Expect = 7e-61, Method: Compositional matrix adjust.
 Identities = 143/143 (100%), Positives = 143/143 (100%), Gaps = 0/143 (0%)

Query  1    MSKSQITKVELEQALGRILSGKTHRVDPARKISVKAVEEEAGLGDGSAYYYKDIVQKIKE  60
            MSKSQITKVELEQALGRILSGKTHRVDPARKISVKAVEEEAGLGDGSAYYYKDIVQKIKE
Sbjct  1    MSKSQITKVELEQALGRILSGKTHRVDPARKISVKAVEEEAGLGDGSAYYYKDIVQKIKE  60

Query  61   SAIRNSPKIRNQNAYEDKISSLRDRLNKEIKLKEKYREQVEDLKEQLSSMASQHNQLTLM  120
            SAIRNSPKIRNQNAYEDKISSLRDRLNKEIKLKEKYREQVEDLKEQLSSMASQHNQLTLM
Sbjct  61   SAIRNSPKIRNQNAYEDKISSLRDRLNKEIKLKEKYREQVEDLKEQLSSMASQHNQLTLM  120

Query  121  IQQYQYKISEFESDIEQLPKYSE  143
            IQQYQYKISEFESDIEQLPKYSE
Sbjct  121  IQQYQYKISEFESDIEQLPKYSE  143

2) VC0182 in NC_002505


> NC_002505_P1|8|G8|15640212|NP_229839.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|8615..9046|-|VC0182|hypothetical 
protein
Length=143

 Score =  226 bits (844),  Expect = 7e-61, Method: Compositional matrix adjust.
 Identities = 143/143 (100%), Positives = 143/143 (100%), Gaps = 0/143 (0%)

Query  1    MSKSQITKVELEQALGRILSGKTHRVDPARKISVKAVEEEAGLGDGSAYYYKDIVQKIKE  60
            MSKSQITKVELEQALGRILSGKTHRVDPARKISVKAVEEEAGLGDGSAYYYKDIVQKIKE
Sbjct  1    MSKSQITKVELEQALGRILSGKTHRVDPARKISVKAVEEEAGLGDGSAYYYKDIVQKIKE  60

Query  61   SAIRNSPKIRNQNAYEDKISSLRDRLNKEIKLKEKYREQVEDLKEQLSSMASQHNQLTLM  120
            SAIRNSPKIRNQNAYEDKISSLRDRLNKEIKLKEKYREQVEDLKEQLSSMASQHNQLTLM
Sbjct  61   SAIRNSPKIRNQNAYEDKISSLRDRLNKEIKLKEKYREQVEDLKEQLSSMASQHNQLTLM  120

Query  121  IQQYQYKISEFESDIEQLPKYSE  143
            IQQYQYKISEFESDIEQLPKYSE
Sbjct  121  IQQYQYKISEFESDIEQLPKYSE  143

3) N175_01695 in NC_022223


> NC_002505_P1|8|G8|15640212|NP_229839.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|8615..9046|-|VC0182|hypothetical 
protein
Length=143

 Score =  188 bits (699),  Expect = 2e-49, Method: Compositional matrix adjust.
 Identities = 117/140 (84%), Positives = 130/140 (93%), Gaps = 1/140 (0%)

Query  1    MSKSQITKVELEQALKRILSGKTHRVDPARKISVKAVEEEAGLGDGSAYYYKDIVQKIKK  60
            MSKSQITKVELEQAL RILSGKTHRVDPARKISVKAVEEEAGLGDGSAYYYKDIVQKIK 
Sbjct  1    MSKSQITKVELEQALGRILSGKTHRVDPARKISVKAVEEEAGLGDGSAYYYKDIVQKIKE  60

Query  61   AVVLNSPKIKAKNVYEDKISSLRERLNKEIKLKEKYRDQVEDYKEQLVNMASQHNQLALM  120
            + + NSPKI+ +N YEDKISSLR+RLNKEIKLKEKYR+QVED KEQL +MASQHNQL+LM
Sbjct  61   SAIRNSPKIRNQNAYEDKISSLRDRLNKEIKLKEKYREQVEDLKEQLSSMASQHNQLTLM  120

Query  121  IQQYQYKIAELES-IDKVHK  139
            IQQYQYKI+E+ES I+++ K
Sbjct  121  IQQYQYKISEFESDIEQLPK  140

4) VAA_02402 in NC_015633


> NC_002505_P1|8|G8|15640212|NP_229839.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|8615..9046|-|VC0182|hypothetical 
protein
Length=143

 Score =  188 bits (699),  Expect = 2e-49, Method: Compositional matrix adjust.
 Identities = 117/140 (84%), Positives = 130/140 (93%), Gaps = 1/140 (0%)

Query  1    MSKSQITKVELEQALKRILSGKTHRVDPARKISVKAVEEEAGLGDGSAYYYKDIVQKIKK  60
            MSKSQITKVELEQAL RILSGKTHRVDPARKISVKAVEEEAGLGDGSAYYYKDIVQKIK 
Sbjct  1    MSKSQITKVELEQALGRILSGKTHRVDPARKISVKAVEEEAGLGDGSAYYYKDIVQKIKE  60

Query  61   AVVLNSPKIKAKNVYEDKISSLRERLNKEIKLKEKYRDQVEDYKEQLVNMASQHNQLALM  120
            + + NSPKI+ +N YEDKISSLR+RLNKEIKLKEKYR+QVED KEQL +MASQHNQL+LM
Sbjct  61   SAIRNSPKIRNQNAYEDKISSLRDRLNKEIKLKEKYREQVEDLKEQLSSMASQHNQLTLM  120

Query  121  IQQYQYKIAELES-IDKVHK  139
            IQQYQYKI+E+ES I+++ K
Sbjct  121  IQQYQYKISEFESDIEQLPK  140

5) amad1_21473 in NC_019394


> NC_002505_P1|8|G8|15640212|NP_229839.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|8615..9046|-|VC0182|hypothetical 
protein
Length=143

 Score = 99.4 bits (358),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 65/137 (48%), Positives = 101/137 (74%), Gaps = 0/137 (0%)

Query  2    MIKSEVTRARLEEALDRILNKATTIVPYSQKLSVKAVEEEAGLGSGSIYYYKDIVEKIQA  61
            M KS++T+  LE+AL+RIL+  T  V  ++K+SVKAVEEEAGLG GS YYYKDIV+KI+ 
Sbjct  1    MSKSQITKVELEQALGRILSGKTHRVDPARKISVKAVEEEAGLGDGSAYYYKDIVQKIKE  60

Query  62   YKNERCsqsllsdnssdalsklRLRLKKEVQLKRKYKSEVAELRERLSNMASQHNSFALT  121
                  ++    +   D +S LR RL+KE++LK KY+ +V +L+E+LS+MASQHN ++L 
Sbjct  61   SAIRNSPKIRNQNAYEDKISSLRDRLNKEIKLKEKYREQVEDLKEQLSSMASQHNQLTLM  120

Query  122  IEEYKQRVAELEYQLAN  138
            I++Y+ +++E+E ++ +
Sbjct  121  IQQYQYKISEFESDIEQ  137

6) I607_20187 in NC_021711


> NC_002505_P1|8|G8|15640212|NP_229839.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|8615..9046|-|VC0182|hypothetical 
protein
Length=143

 Score = 99.4 bits (358),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 65/137 (48%), Positives = 101/137 (74%), Gaps = 0/137 (0%)

Query  1    MIKSEVTRARLEEALDRILNKATTIVPYSQKLSVKAVEEEAGLGSGSIYYYKDIVEKIQA  60
            M KS++T+  LE+AL+RIL+  T  V  ++K+SVKAVEEEAGLG GS YYYKDIV+KI+ 
Sbjct  1    MSKSQITKVELEQALGRILSGKTHRVDPARKISVKAVEEEAGLGDGSAYYYKDIVQKIKE  60

Query  61   YKNERCsqsllsdnssdalsklRLRLKKEVQLKRKYKSEVAELRERLSNMASQHNSFALT  120
                  ++    +   D +S LR RL+KE++LK KY+ +V +L+E+LS+MASQHN ++L 
Sbjct  61   SAIRNSPKIRNQNAYEDKISSLRDRLNKEIKLKEKYREQVEDLKEQLSSMASQHNQLTLM  120

Query  121  IEEYKQRVAELEYQLAN  137
            I++Y+ +++E+E ++ +
Sbjct  121  IQQYQYKISEFESDIEQ  137

7) I635_21479 in NC_021718


> NC_002505_P1|8|G8|15640212|NP_229839.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|8615..9046|-|VC0182|hypothetical 
protein
Length=143

 Score = 99.4 bits (358),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 65/137 (48%), Positives = 101/137 (74%), Gaps = 0/137 (0%)

Query  1    MIKSEVTRARLEEALDRILNKATTIVPYSQKLSVKAVEEEAGLGSGSIYYYKDIVEKIQA  60
            M KS++T+  LE+AL+RIL+  T  V  ++K+SVKAVEEEAGLG GS YYYKDIV+KI+ 
Sbjct  1    MSKSQITKVELEQALGRILSGKTHRVDPARKISVKAVEEEAGLGDGSAYYYKDIVQKIKE  60

Query  61   YKNERCsqsllsdnssdalsklRLRLKKEVQLKRKYKSEVAELRERLSNMASQHNSFALT  120
                  ++    +   D +S LR RL+KE++LK KY+ +V +L+E+LS+MASQHN ++L 
Sbjct  61   SAIRNSPKIRNQNAYEDKISSLRDRLNKEIKLKEKYREQVEDLKEQLSSMASQHNQLTLM  120

Query  121  IEEYKQRVAELEYQLAN  137
            I++Y+ +++E+E ++ +
Sbjct  121  IQQYQYKISEFESDIEQ  137

8) Sput200_4168 in NC_017566


> NC_002505_P1|8|G8|15640212|NP_229839.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|8615..9046|-|VC0182|hypothetical 
protein
Length=143

 Score = 85.7 bits (306),  Expect = 2e-18, Method: Compositional matrix adjust.
 Identities = 56/138 (41%), Positives = 94/138 (69%), Gaps = 1/138 (0%)

Query  1    MKKSENTLLKLEAALLRIIERKTKRIPDHRKLSVRAVEEEAGLGNGSCYYYPDFKLRV-Q  59
            M KS+ T + LE AL RI+  KT R+   RK+SV+AVEEEAGLG+GS YYY D+  ++ +
Sbjct  1    MSKSQITKVELEQALGRILSGKTHRVDPARKISVKAVEEEAGLGDGSAYYYKDIVQKIKE  60

Query  60   SEVQKLKCLTPDTAVQSDVEILREKRNQERKIKIQYREKVAVLTQRLTSMAAEHHQLSHA  119
            S +++   +  + A +  +  LR++ N+E K+K +YRE+V  L ++L+SMA++H+QL+  
Sbjct  61   SAIRNSPKIRNQNAYEDKISSLRDRLNKEIKLKEKYREQVEDLKEQLSSMASQHNQLTLM  120

Query  120  LRSALSRIEDLELQIVEL  137
            ++    +I ++E +I +L
Sbjct  121  IQQYQYKISEFESDIEQL  138

9) Sden_3584 in NC_007954


> NC_002505_P1|8|G8|15640212|NP_229839.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|8615..9046|-|VC0182|hypothetical 
protein
Length=143

 Score = 85.5 bits (305),  Expect = 2e-18, Method: Compositional matrix adjust.
 Identities = 56/138 (41%), Positives = 93/138 (68%), Gaps = 1/138 (0%)

Query  1    MKKSENTLLKLEAALQRIIERKTKRIPDHRKLSVRAVEEEAGLGNGSCYYYPDFKLRVQS  60
            M KS+ T + LE AL RI+  KT R+   RK+SV+AVEEEAGLG+GS YYY D+  +++ 
Sbjct  1    MSKSQITKVELEQALGRILSGKTHRVDPARKISVKAVEEEAGLGDGSAYYYKDIVQKIKE  60

Query  61   EAQKLKC-LTPDTAVQSDVEILREKRNQERKVKIQYREKVAVLNQRLTSMAAEHHQLSHA  119
             A +    +  + A +  +  LR++ N+E K+K +YRE+V  L+++L+SMA++H+QL+  
Sbjct  61   SAIRNSPKIRNQNAYEDKISSLRDRLNKEIKLKEKYREQVEDLKEQLSSMASQHNQLTLM  120

Query  120  LRSALSRIEDLELQIVEL  137
            ++    +I ++E +I +L
Sbjct  121  IQQYQYKISEFESDIEQL  138

10) Sputw3181_3988 in NC_008750


> NC_002505_P1|8|G8|15640212|NP_229839.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|8615..9046|-|VC0182|hypothetical 
protein
Length=143

 Score = 85.5 bits (305),  Expect = 3e-18, Method: Compositional matrix adjust.
 Identities = 56/138 (41%), Positives = 94/138 (69%), Gaps = 1/138 (0%)

Query  1    MKKSENTLLKLEAALQRIIERKTKRIPDHRKLSVRAVEEEAGLGNGSCYYYPDFKLRV-Q  59
            M KS+ T + LE AL RI+  KT R+   RK+SV+AVEEEAGLG+GS YYY D+  ++ +
Sbjct  1    MSKSQITKVELEQALGRILSGKTHRVDPARKISVKAVEEEAGLGDGSAYYYKDIVQKIKE  60

Query  60   SEVQKLKCLTPDTAVRADVEILREKRNQERKIKIQYREKVAVLNQRLTSMAAEHHQLSHA  119
            S +++   +  + A    +  LR++ N+E K+K +YRE+V  L+++L+SMA++H+QL+  
Sbjct  61   SAIRNSPKIRNQNAYEDKISSLRDRLNKEIKLKEKYREQVEDLKEQLSSMASQHNQLTLM  120

Query  120  LRSALSRIEDLELQIVEL  137
            ++    +I ++E +I +L
Sbjct  121  IQQYQYKISEFESDIEQL  138

11) XNC1_4304 in NC_014228


> NC_002505_P1|8|G8|15640212|NP_229839.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|8615..9046|-|VC0182|hypothetical 
protein
Length=143

 Score = 84.2 bits (300),  Expect = 6e-18, Method: Compositional matrix adjust.
 Identities = 56/139 (41%), Positives = 94/139 (68%), Gaps = 3/139 (2%)

Query  1    MKKSENTLLKLEAALQRIIERKTKRIPDHRKLSVRAVEEEAGLGNGSCYYYPDFKLRVQS  60
            M KS+ T + LE AL RI+  KT R+   RK+SV+AVEEEAGLG+GS YYY D+  +++ 
Sbjct  1    MSKSQITKVELEQALGRILSGKTHRVDPARKISVKAVEEEAGLGDGSAYYYKDIVQKIKE  60

Query  61   EVQKLKCPAL--GTAAQSDVEILRGKRNQERKVKIQYREKVAVLNQRLTSMAAEHHQLSH  118
               + + P +    A +  +  LR++ N+E K+K +YRE+V  L+++L+SMA++H+QL+ 
Sbjct  61   SAIR-NSPKIRNQNAYEDKISSLRDRLNKEIKLKEKYREQVEDLKEQLSSMASQHNQLTL  119

Query  119  ALRNALSRIEDLELQIVEL  137
             +++   +I ++E +I +L
Sbjct  120  MIQQYQYKISEFESDIEQL  138