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Homologs of unnamed gene of EF611304

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) YSA_p00009
( YP_006870572.1 )

putative TraY/DotA-like type IV secretion system protein

NC_018746
(Pseudomonas putida ND6)

0.0

2) traY
( YP_584969.1 )

TraY/DotA-like type IV secretion system protein

NC_007973
(Cupriavidus metallidurans CH34)

0.0

3) dotA
( YP_361586.1 )

TraY/DotA-like type IV secretion system protein

NC_007507
(Xanthomonas campestris 85-10)

4e-133

4) XCVb0002
( YP_361496.1 )

DotA/TraY family membrane protein

NC_007505
(Xanthomonas campestris 85-10)

8e-115

• Sequence Alignments

1) YSA_p00009 in NC_018746


> EF611304|8|G8|148807466|ABR13537.1|Pseudomonas_aeruginosa_PSE9|-|8573..10828|-|-|putative 
DotA
Length=751

 Score = 1018 bits (3860),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 668/685 (98%), Positives = 681/685 (99%), Gaps = 0/685 (0%)

Query  28   NQFTPPPGDTSVDFLEEVFGSIVGTIHSGGNVEGGETEDVLGSMMSVFGGAVMFLGMLFI  87
            NQFTPPPGDTSVDFLEEVFGSIVGTIHSGGNVEGGETEDVLGSMMSVFGGAVMFLGM+FI
Sbjct  28   NQFTPPPGDTSVDFLEEVFGSIVGTIHSGGNVEGGETEDVLGSMMSVFGGAVMFLGMIFI  87

Query  88   AYTTIKGTVDSAQDGEVLGRKMSDIWIPLRTaaggalllplghgYSLIQIMVLWLAIQGV  147
            AYTTIKGTVDSAQDGEVLGRKMSDIWIPLRTAAGGALLLPLGHGYSLIQIMVLWLAIQGV
Sbjct  88   AYTTIKGTVDSAQDGEVLGRKMSDIWIPLRTAAGGALLLPLGHGYSLIQIMVLWLAIQGV  147

Query  148  GVGDAIWSQAVDQIGKDGMLSRPLIPDSRPLAANILKFEVCTAAMNKQFEASGRSTRIQA  207
            GVGDAIWSQAVDQIGKDGMLSRPLIPDSRPLAANILKFEVCTAAMNKQFEASGRSTRIQA
Sbjct  148  GVGDAIWSQAVDQIGKDGMLSRPLIPDSRPLAANILKFEVCTAAMNKQFEASGRSTRIQA  207

Query  208  VASTRKVVNTGEIDVDITDAIPVYGGINMVQKYNKASYTVTDYKWKANDNSYMNPDVCGA  267
            VAS+RKVVNTGEIDVDITDAIPVYGGINMVQKYNKASYTVTDYKWKANDNSY+NPDVCGA
Sbjct  208  VASARKVVNTGEIDVDITDAIPVYGGINMVQKYNKASYTVTDYKWKANDNSYINPDVCGA  267

Query  268  LTWKQSWEASEGNSNTKVIKEPILAAHAKAIQQMIQDIRPTAQQIVAGQKPAPGVIDAAA  327
            LTWKQSWEASEGNSNTKVIKEPILAAHAKAIQQMIQDIRPTAQQIVAGQKPAPGVIDAAA
Sbjct  268  LTWKQSWEASEGNSNTKVIKEPILAAHAKAIQQMIQDIRPTAQQIVAGQKPAPGVIDAAA  327

Query  328  NTYENSLRAAAKTAVMQTSDRAAADFLKAAKDGGWLFAGTWYNHIVKMNDVMQSTLNGLP  387
            NTYENSLR+AAKTAVMQTSDRAAADFLKAAKDGGWLFAGTWYNHIVKMNDVMQSTLNGLP
Sbjct  328  NTYENSLRSAAKTAVMQTSDRAAADFLKAAKDGGWLFAGTWYNHIVKMNDVMQSTLNGLP  387

Query  388  AADPIAIVDKETKETLQTYADVMLTADEYAKHRVDSVRNTYYAETNVREPRDGEGAWEYV  447
            AA+PIAIVDKETKETLQTYADVMLT+DEYAKHRVDSVRNTYYAETNVREPRDGEGAWEYV
Sbjct  388  AAEPIAIVDKETKETLQTYADVMLTTDEYAKHRVDSVRNTYYAETNVREPRDGEGAWEYV  447

Query  448  KKMMSAPFMGAINQMTQSIAGSNLNHMSQMKSFGDVIVTTGEVMLAAMATATGVANSWAA  507
            KKMMSAPFMGAINQMTQSIAGSNLNHMSQMKSFGDVIVTTGEVMLAAMA+ATGVANSWAA
Sbjct  448  KKMMSAPFMGAINQMTQSIAGSNLNHMSQMKSFGDVIVTTGEVMLAAMASATGVANSWAA  507

Query  508  QATVKVGFDAGAVFQFLSGIITLMLLALFAFGVTLSTYVPMIPFITWTTSIVNWFVLVLE  567
            QATVKVGFD GAVFQFLS +IT +L+ LFA+GVTLSTYVPMIPFITWTT+IVNWFVLVLE
Sbjct  508  QATVKVGFDVGAVFQFLSTLITTLLILLFALGVTLSTYVPMIPFITWTTAIVNWFVLVLE  567

Query  568  SVIAAPLFAVAHIHPDGDDAVGRAGQGYMMILSLVMRPAlmlfgllggmllTQPIVGYIN  627
            SVIAAPLFAVAHIHPDGD+AVGRAGQGYMMILSLVMRPALMLFGLLGGMLLTQPIVGYIN
Sbjct  568  SVIAAPLFAVAHIHPDGDNAVGRAGQGYMMILSLVMRPALMLFGLLGGMLLTQPIVGYIN  627

Query  628  AAFMSVVSGIQADSMTGIVSFIAYVAIYVVMMTTVVHIVFSLIHWVPDNILRWIGNGSTG  687
            AAFMSVVSGIQADSMTGIVSFIAYVAIYVVMMTTVVHIVFSLIHWVPDNILRWIGNGSTG
Sbjct  628  AAFMSVVSGIQADSMTGIVSFIAYVAIYVVMMTTVVHIVFSLIHWVPDNILRWIGNGSTG  687

Query  688  GIADAERTGDSGQDVFVAGVRETKH  712
            GIADAERTGDSGQDVFVAGVRETKH
Sbjct  688  GIADAERTGDSGQDVFVAGVRETKH  712

2) traY in NC_007973


> EF611304|8|G8|148807466|ABR13537.1|Pseudomonas_aeruginosa_PSE9|-|8573..10828|-|-|putative 
DotA
Length=751

 Score =  803 bits (3038),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 508/732 (70%), Positives = 641/732 (88%), Gaps = 5/732 (0%)

Query  21   ADSPTGMSLNQFTPPAGDTSVDFLREVFgniiglissggnvsggQNDDVLGAMMKVFNAA  80
            A++ ++ +LNQFTPP+GDTSVDFL EVFG+I+G I SGGNV GG+ +DVLG+MM VF +A
Sbjct  19   AHADSSGGLNQFTPPPGDTSVDFLEEVFGSIVGTIHSGGNVEGGETEDVLGSMMSVFGGA  78

Query  81   VLFLGMLFIAYTTIKGTIDSAHDGEVLGKSMKSPYVILRSVAGTALLLPLGSGYSLIQIG  140
            V+FLGM+FIAYTTIKGT+DSA+DGEVLG+ M    + LR+ AG ALLLPLG GYSLIQI 
Sbjct  79   VMFLGMIFIAYTTIKGTVDSAQDGEVLGRKMSDIWIPLRTAAGGALLLPLGHGYSLIQIM  138

Query  141  ILWLALQGVGVADAIWKAAIEQINRDNMISRPMIPDSRPLAANILKFEVCAAAMNKQFQD  200
            +LWLA+QGVGV+DAIW  A++QI +D M+SRP+IPDSRPLAANILKFEVC+AAMNKQF+ 
Sbjct  139  VLWLAIQGVGVGDAIWSQAVDQIGKDGMLSRPLIPDSRPLAANILKFEVCTAAMNKQFEA  198

Query  201  SGRGTRVHPVPSTQVMMNSGELLNYDVFDAIPVVGAYTTIKNLSNAKYTVSNYQWKANDN  260
            SGR+TR+++V+S++ ++N+GE+ + D+ DAIPV G+   +++ ++A YTV++Y+WKANDN
Sbjct  199  SGRSTRIQAVASARKVVNTGEI-DVDITDAIPVYGGINMVQKYNKASYTVTDYKWKANDN  257

Query  261  SYVNPTVCGGISWKQSWEASEGNSNTKVIKEPIMTAHAQAVQRMIQELQPTANQIVAGQK  320
            SY+NP VCG+++WKQSWEASEGNSNTKVIKEPI++AHA+A+Q+MIQ+++PTA+QIVAGQK
Sbjct  258  SYINPDVCGALTWKQSWEASEGNSNTKVIKEPILAAHAKAIQQMIQDIRPTAQQIVAGQK  317

Query  321  PTPGAIDTAANNYENTLRDAAKNAVSQTNDRARSDFLQAAKDGGWIFAGTWYNHIVKMND  380
            P+PG ID+AAN YEN+LR AAK AV QT+DRA +DFL+AAKDGGW+FAGTWYNHIVKMND
Sbjct  318  PAPGVIDAAANTYENSLRSAAKTAVMQTSDRAAADFLKAAKDGGWLFAGTWYNHIVKMND  377

Query  381  VMQSTLNGLPTSEPIDITDKETQEVLQTYQDAMATANEYTKHRVEGIRQVYYNQTDVRAP  440
            VMQSTLNGLP++EPI I DKET+E LQTY D M T++EY+KHRV+++R+ YY +T+VR P
Sbjct  378  VMQSTLNGLPAAEPIAIVDKETKETLQTYADVMLTTDEYAKHRVDSVRNTYYAETNVREP  437

Query  441  QQGEGAWEYVRKLMSTPFMGAINQMTQEIAGSNLNHMSQMKSFGDSIAGTGEALLVGMAG  500
            ++GEGAWEYV+K+MS+PFMGAINQMTQ IAGSNLNHMSQMKSFGD I  TGE +L +MA+
Sbjct  438  RDGEGAWEYVKKMMSAPFMGAINQMTQSIAGSNLNHMSQMKSFGDVIVTTGEVMLAAMAS  497

Query  501  ATGVANSWFAQGTAKTGFDAAAVLQFLSGMVTTIVIALFFFGAVLSSYVPMIPFITWMTS  560
            ATGVANSW AQ+T K GFD +AV+QFLS ++TT++I LF +G  LS+YVPMIPFITW T+
Sbjct  498  ATGVANSWAAQATVKVGFDVGAVFQFLSTLITTLLILLFALGVTLSTYVPMIPFITWTTA  557

Query  561  VVNWFVLALESVIAGPLFAVAHIHPDGDDAVGKAGNGYMMILSLVMRPAlmlfgliggml  620
            +VNWFVL LESVIA+PLFAVAHIHPDGD+AVG+AG+GYMMILSLVMRPALMLFGL+GGML
Sbjct  558  IVNWFVLVLESVIAAPLFAVAHIHPDGDNAVGRAGQGYMMILSLVMRPALMLFGLLGGML  617

Query  621  lTQPVVGLINVAFMTVVAGIQADSMTGIVSFFAYvtiyviimttvvhivFSLIHWIPDNI  680
            LTQP+VG IN AFM+VV+GIQADSMTGIVSF+AYV+IYV++MTTVVHIVFSLIHW+PDNI
Sbjct  618  LTQPIVGYINAAFMSVVSGIQADSMTGIVSFIAYVAIYVVMMTTVVHIVFSLIHWVPDNI  677

Query  681  LRWLG-AHAGGIGSAERAGEQGHDILVGGVREVKHGAGGLGGGSQKRPSGGSGAGGELRP  739
            LRW+G + +GGI+ AER+G+ G+D++V+GVRE KHGA+G  GG+ K++ G   +      
Sbjct  678  LRWIGNGSTGGIADAERTGDSGQDVFVAGVRETKHGAAGGLGGGAKHSKGPDNST---PG  734

Query  740  SASPSNKDLLGD  751
             + P N+ LLG+
Sbjct  735  RSMPDNNTLLGG  746

3) dotA in NC_007507


> EF611304|8|G8|148807466|ABR13537.1|Pseudomonas_aeruginosa_PSE9|-|8573..10828|-|-|putative 
DotA
Length=751

 Score =  469 bits (1766),  Expect = 4e-133, Method: Compositional matrix adjust.
 Identities = 301/683 (45%), Positives = 494/683 (73%), Gaps = 23/683 (3%)

Query  135  FKPPADDTSVSFIRDVFGSIVDTIMTGQNVDQASADTALAAGFEVFGLGILALGMLFVIF  194
            F PP++DTSV F+ +VFGSIV+TI +G NV+ + ++  L++   VFG +++ LGM+F+ +
Sbjct  30   FTPPPGDTSVDFLEEVFGSIVGTIHSGGNVEGGETEDVLGSMMSVFGGAVMFLGMIFIAY  89

Query  195  TTVKGAVDTAHDGEFLGKKMSSVWVPLRTAAGTAFLLPLKSGFSLVQIAVLWIGIHGVGL  254
            TT+KG+VD+A+DGE LG+KMS +W+PLRTAAG A+LLPL  G+SL+QI VLW++I+GVG+
Sbjct  90   TTIKGTVDSAQDGEVLGRKMSDIWIPLRTAAGGALLLPLGHGYSLIQIMVLWLAIQGVGV  149

Query  255  ADQVWLAMLDKMVETGQMGRPHLPDSRPLAANILRYEVCAAAMNKQYETEGRALKIEVLP  314
            +D +W   +D++   G ++RP +PDSRPLAANIL++EVC+AAMNKQ+E+ GR+ +I+ ++
Sbjct  150  GDAIWSQAVDQIGKDGMLSRPLIPDSRPLAANILKFEVCTAAMNKQFEASGRSTRIQAVA  209

Query  315  KKTAMINTGD-ALKFDNIL--YPGGFLDLAQSAAGSAFSVTGLQWSAVGSGGYMNQNVCG  371
                ++NTG+  + + + +  Y G  +++ Q    ++++VT+ +W A    +Y+N +VCG
Sbjct  210  SARKVVNTGEIDVDITDAIPVYGG--INMVQKYNKASYTVTDYKWKA-NDNSYINPDVCG  266

Query  372  ELEWQESHESSESNGAPYIDKAPILRAQAQAVQKMVSELRPVAQAIVAGEKPAAGALERV  431
             L W++S E+SE+N+   + K PIL A+A+A+Q+M+ ++RP AQ IVAG+KPA+G ++  
Sbjct  267  ALTWKQSWEASEGNSNTKVIKEPILAAHAKAIQQMIQDIRPTAQQIVAGQKPAPGVIDAA  326

Query  432  ANTYELSLQTAALSVVNRANKNRNSRFLTYAKEGGWIFAGTYYNHIIHMSDAIQSAVNSL  491
            ANTYE SL++AA + V +++    + FL  AK+GGW+FAGT YNHI+ M+D +QS++N+L
Sbjct  327  ANTYENSLRSAAKTAVMQTSDRAAADFLKAAKDGGWLFAGTWYNHIVKMNDVMQSTLNGL  386

Query  492  PASSAQTITDKEAADTLILYQDSLVTANEYIRNSSQSAYRAYEAQNQAIGFTGDKIPSNF  551
            PA+ + +I DKE+ +TL  Y D ++T++EY ++  +S   +Y        ++  ++    
Sbjct  387  PAAEPIAIVDKETKETLQTYADVMLTTDEYAKHRVDSVRNTY--------YAETNVREPR  438

Query  552  EEMKIW------LSRPALAGINQMTQEIAGSNLSHVAQMKNVGDTIMAVAWTIQGAQFIV  605
            +    W      +S P +++INQMTQ IAGSNL+H++QMK+ GD I++ +  + +A    
Sbjct  439  DGEGAWEYVKKMMSAPFMGAINQMTQSIAGSNLNHMSQMKSFGDVIVTTGEVMLAAMASA  498

Query  606  AGFGGGLWDDAVTLG-SYDIGASIETLTPAVAFLFMTLLTAGAFLAFYVPMIPYIIWITG  664
            +G + + W    T+  ++D+GA ++ L+  ++ L++ L++ G  L+ YVPMIP+I W T+
Sbjct  499  TGVANS-WAAQATVKVGFDVGAVFQFLSTLITTLLILLFALGVTLSTYVPMIPFITWTTA  557

Query  665  IIKWLTVLFESVIAAPIWAAAHVHPDGDDQGGRAGPGYMIILSVFLRPTLMIFGLVGSIV  724
            I++W+ +++ESVIAAP+ A AH+HPDGD+  GRAG GYM+ILS+ +RP+LM+FGL+G+++
Sbjct  558  IVNWFVLVLESVIAAPLFAVAHIHPDGDNAVGRAGQGYMMILSLVMRPALMLFGLLGGML  617

Query  725  VAQPVAHYVNLTYITQVQGAMGNSANaigaliaytaiyailmtiVLHSVFGFINWIPDNV  784
            ++QP+  Y+N ++++ V G  ++S  +I ++IAY AIY ++MT V+H VF++I+W+PDN+
Sbjct  618  LTQPIVGYINAAFMSVVSGIQADSMTGIVSFIAYVAIYVVMMTTVVHIVFSLIHWVPDNI  677

Query  785  LRWIGSAVGMHGIADNEEHGVKG  807
            LRWIG++ +  GIAD E  G  G
Sbjct  678  LRWIGNG-STGGIADAERTGDSG  699

4) XCVb0002 in NC_007505


> EF611304|8|G8|148807466|ABR13537.1|Pseudomonas_aeruginosa_PSE9|-|8573..10828|-|-|putative 
DotA
Length=751

 Score =  407 bits (1533),  Expect = 8e-115, Method: Compositional matrix adjust.
 Identities = 300/698 (43%), Positives = 486/698 (70%), Gaps = 30/698 (4%)

Query  23   NPPADDSSLGILREVFGNIVDFVIGNGVSAANLSENNTVIASGFEVFNTAILFLAMIFVA  82
             PP++D+S+++L EVFG+IV+ + + G   +  +E + V++S   VF  A++FL+MIF+A
Sbjct  31   TPPPGDTSVDFLEEVFGSIVGTIHSGGNVEG--GETEDVLGSMMSVFGGAVMFLGMIFIA  88

Query  83   YSSIMGVINTAHDGEFLGRKMSSIWVPLRTVggsalllplaggfsliqiiilwltlqGVG  142
            Y++I G +++A+DGE LGRKMS IW+PLRT +G+ALLLPL+ G+SLIQI++LWL++QGVG
Sbjct  89   YTTIKGTVDSAQDGEVLGRKMSDIWIPLRTAAGGALLLPLGHGYSLIQIMVLWLAIQGVG  148

Query  143  IGDKAWTAMLGRIDQSGMINHPAIPNARPLVANILRSEVCMAAMNKQYAESDRTDRINLV  202
            +GD  W+  +++I++ GM+++P IP++RPL ANIL+ EVC AAMNKQ+  S+R+ RI+  
Sbjct  149  VGDAIWSQAVDQIGKDGMLSRPLIPDSRPLAANILKFEVCTAAMNKQFEASGRSTRIQ--  206

Query  203  EIKSSRTQMVPTDDllggtggnglglfgIN----YKSLTVPVTSWSWAASNGSYIRNDVC  258
             + S+R ++V T+++  +  +      GIN    Y+  +  VT   W A++ SYI  DVC
Sbjct  207  AVASAR-KVVNTGEIDVDITDAIPVYGGINMVQKYNKASYTVTDYKWKANDNSYINPDVC  265

Query  259  GGISWDESSESQAGNARYLDVAK--ISTAHTAAVRDVILAIRPVAASIVAGQKPNSDVIL  316
            G+++W +S E+  GN+    V K  I +AH+ A++++I  IRP A  IVAGQKP ++VI 
Sbjct  266  GALTWKQSWEASEGNSN-TKVIKEPILAAHAKAIQQMIQDIRPTAQQIVAGQKPAPGVID  324

Query  317  STAYAYENKLRQAAKAAVDSGNKASRSAFVDYAKTGGWVFAGSYYNHIISLNDSVQLAVN  376
            ++A +YEN LR AAK+AV   +  + + F+  AK GGW+FAG+ YNHI+ +ND +Q ++N
Sbjct  325  AAANTYENSLRSAAKTAVMQTSDRAAADFLKAAKDGGWLFAGTWYNHIVKMNDVMQSTLN  384

Query  377  SLPTSTSIDIQDKESQEALYGFRDAMTVTEEFLKHRSQSAAAAYANETRLDTDACKSPTP  436
            +LP++ +I I DKE++E+L  + D M  T+E+ KHR +S   +Y  ET +          
Sbjct  385  GLPAAEPIAIVDKETKETLQTYADVMLTTDEYAKHRVDSVRNTYYAETNVRE---PRDGE  441

Query  437  TGWDEIRTCLSKPALAGIELMAANMTGSNTSHVAQVKAVGDTIMNVAWTQAGVFAIAGGV  496
             +W+ ++  +S P +++I+ M+ +++GSN +H++Q+K+ GD I+  +    +  A A GV
Sbjct  442  GAWEYVKKMMSAPFMGAINQMTQSIAGSNLNHMSQMKSFGDVIVTTGEVMLAAMASATGV  501

Query  497  AD------AKLVDYSVGSFFSLKGAlgsvsvlvntlvlsmlTAGIVLAFYVPMIPFITWT  550
            A+      +  V++ VG+ F + ++L +  +++        + G+ L+ YVPMIPFITWT
Sbjct  502  ANSWAAQATVKVGFDVGAVFQFLSTLITTLLILLF------ALGVTLSTYVPMIPFITWT  555

Query  551  VGVIKWLVSVaeamvaapifaaaHIHPDGDEAVGRAGPGYTIILSTVLRPILMLFGLILS  610
             ++++W+V V E+++AAP+FA AHIHPDGD+AVGRAG GY +ILS V+RP LMLFGL+ +
Sbjct  556  TAIVNWFVLVLESVIAAPLFAVAHIHPDGDNAVGRAGQGYMMILSLVMRPALMLFGLLGG  615

Query  611  IAVAQPIAHFVNAGFMLAVKGSMHDSANGLGAFVAYCVIYVIIMTTVLHSVFALIHWIPD  670
            + ++QPI  ++NA+FM  V G   DS  G+ +F+AY  IYV++MTTV+H VF+LIHW+PD
Sbjct  616  MLLTQPIVGYINAAFMSVVSGIQADSMTGIVSFIAYVAIYVVMMTTVVHIVFSLIHWVPD  675

Query  671  NTMRWMGSAVGMGGVGD--REEGESHQVFAGAARQGRN  706
            N +RW+G++ + GG++D  R  + +++VF ++ R+ ++
Sbjct  676  NILRWIGNG-STGGIADAERTGDSGQDVFVAGVRETKH  712