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Homologs of EXB6 gene of DQ437743

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) LHK_01025
( YP_002795026.1 )

hypothetical protein

NC_012559
(Laribacter hongkongensis HLHK9)

6e-23

2) LHK_01172
( YP_002795172.1 )

hypothetical protein

NC_012559
(Laribacter hongkongensis HLHK9)

6e-23

3) HCH_02574
( YP_433799.1 )

transposase

NC_007645
(Hahella chejuensis KCTC 2396)

9e-23

4) PM3016_4146
( YP_005314073.1 )

integrase catalytic subunit

NC_016935
(Paenibacillus mucilaginosus 3016)

1e-21

5) C427_4199
( YP_007545652.1 )

integrase catalytic subunit

NC_020514
(Glaciecola psychrophila 170)

7e-21

6) UM146_21805
( YP_006113201.1 )

transposase

NC_017632
(Escherichia coli UM146)

1e-18

7) JCM7686_pAMI8p198
( YP_008408582.1 )

transposase

NC_022050
(Paracoccus aminophilus JCM 7686)

1e-18

8) Neut_2189
( YP_748376.1 )

transposase and inactivated derivatives

NC_008344
(Nitrosomonas eutropha C91)

2e-18

9) C427_1061
( YP_007542518.1 )

integrase catalytic subunit

NC_020514
(Glaciecola psychrophila 170)

2e-17

10) S1431
( NP_837027.1 )

IS911 orfB

NC_004741
(Shigella flexneri 2457T)

2e-14

11) Atc_0502
( YP_004747852.1 )

integrase catalytic subunit

NC_015850
(Acidithiobacillus caldus SM-1)

9e-14

12) AZL_f00520
( YP_003453356.1 )

transposase

NC_013860
(Azospirillum sp. B510)

1e-11

13) SARI_02034
( YP_001571055.1 )

hypothetical protein

NC_010067
(Salmonella enterica RSK2980)

5e-11

• Sequence Alignments

1) LHK_01025 in NC_012559


> DQ437743|8|G6|90569623|ABD94693.1|Pseudomonas_aeruginosa_19660|-|2813..3187|-|EXB6|transposase 
derived protein
Length=124

 Score =  100 bits (361),  Expect = 6e-23, Method: Compositional matrix adjust.
 Identities = 54/91 (60%), Positives = 70/91 (77%), Gaps = 0/91 (0%)

Query  7    RHGLPVAPNVLDRQFDPVTPNRAWVTDITYVRTRSGWLYLAAVMDLFSRKIVGGAMTPSM  66
            RH+LP+APN LDRQF +  +NR WV+D+TYVRT  GWLYLA V+DL+SR +VG AM   M
Sbjct  21   RHALPIAPNHLDRQFASDRANRHWVSDMTYVRTTQGWLYLAVVLDLYSRAVVGWAMHHRM  80

Query  67   PAELVCAALRMAIAQRRPAAGLVVHPDRGSQ  97
               LV AAL MA+A+R+P   +++H+DRGSQ
Sbjct  81   QQALVHAALEMAVARRQPKEEVLLHSDRGSQ  111

2) LHK_01172 in NC_012559


> DQ437743|8|G6|90569623|ABD94693.1|Pseudomonas_aeruginosa_19660|-|2813..3187|-|EXB6|transposase 
derived protein
Length=124

 Score =  100 bits (361),  Expect = 6e-23, Method: Compositional matrix adjust.
 Identities = 54/91 (60%), Positives = 70/91 (77%), Gaps = 0/91 (0%)

Query  7    RHGLPVAPNVLDRQFDPVTPNRAWVTDITYVRTRSGWLYLAAVMDLFSRKIVGGAMTPSM  66
            RH+LP+APN LDRQF +  +NR WV+D+TYVRT  GWLYLA V+DL+SR +VG AM   M
Sbjct  21   RHALPIAPNHLDRQFASDRANRHWVSDMTYVRTTQGWLYLAVVLDLYSRAVVGWAMHHRM  80

Query  67   PAELVCAALRMAIAQRRPAAGLVVHPDRGSQ  97
               LV AAL MA+A+R+P   +++H+DRGSQ
Sbjct  81   QQALVHAALEMAVARRQPKEEVLLHSDRGSQ  111

3) HCH_02574 in NC_007645


> DQ437743|8|G6|90569623|ABD94693.1|Pseudomonas_aeruginosa_19660|-|2813..3187|-|EXB6|transposase 
derived protein
Length=124

 Score = 99.6 bits (359),  Expect = 9e-23, Method: Compositional matrix adjust.
 Identities = 54/111 (49%), Positives = 78/111 (71%), Gaps = 0/111 (0%)

Query  1    MPRQGLRVKVARKFKATTYSGHNLPVAENLLQQDFKATAINQKWAGDITYLWTKEGWLYL  60
            M   GLRV+  ++ +  + S H LP+A N L+++F +   N+ W +D+TY++T +GWLYL
Sbjct  1    MREAGLRVRSRKRWRLVSSSRHALPIAPNHLDRQFASDRANRHWVSDMTYVRTTQGWLYL  60

Query  61   AVVLDLFSRQIIGWAMSPRMKSELVCDALRMALWRRHQPKGVIVHSDRGSQ  111
            AVVLDL+SR ++GWAM  RM+  LV  AL MA+ RR+    V++HSDRGSQ
Sbjct  61   AVVLDLYSRAVVGWAMHHRMQQALVHAALEMAVARRQPKEEVLLHSDRGSQ  111

4) PM3016_4146 in NC_016935


> DQ437743|8|G6|90569623|ABD94693.1|Pseudomonas_aeruginosa_19660|-|2813..3187|-|EXB6|transposase 
derived protein
Length=124

 Score = 96.2 bits (346),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 50/108 (47%), Positives = 75/108 (70%), Gaps = 0/108 (0%)

Query  1    MKEMGLKSITVGKYKATTNSKHNMPVHDNILNRQFKVDAPNKVWVTDITYVATGEGWLYL  60
            M+E GL+  +  + +  ++S+H +P+  N L+RQF  D +N+ WV+D+TYV T +GWLYL
Sbjct  1    MREAGLRVRSRKRWRLVSSSRHALPIAPNHLDRQFASDRANRHWVSDMTYVRTTQGWLYL  60

Query  61   ASVMDLFSRKIVGWATGARMTRELVIDALELAYRRQKPAPGLIHHSDR  108
            A V+DL+SR +VGWA   RM + LV  ALE+A  R++P   ++ HSDR
Sbjct  61   AVVLDLYSRAVVGWAMHHRMQQALVHAALEMAVARRQPKEEVLLHSDR  108

5) C427_4199 in NC_020514


> DQ437743|8|G6|90569623|ABD94693.1|Pseudomonas_aeruginosa_19660|-|2813..3187|-|EXB6|transposase 
derived protein
Length=124

 Score = 93.3 bits (335),  Expect = 7e-21, Method: Compositional matrix adjust.
 Identities = 53/118 (45%), Positives = 87/118 (74%), Gaps = 3/118 (2%)

Query  1    MKEAGVWVRYKKKYKATTNSDHKKPIYDNELKQDFAAQKPDQAYVHYVQDITHVWISEGW  60
            M+EAG++VR +K+ +  ++S H  PI  N+L ++FA++++++   H V D+T V+ ++GW
Sbjct  1    MREAGLRVRSRKRWRLVSSSRHALPIAPNHLDRQFASDRANR---HWVSDMTYVRTTQGW  57

Query  61   LYLAVVIDLYSRKVVGWSMSSRMKASLVCDALTMAIWQRQPKARLIVHSDQSLSPPYQ  118
            LYLAVV+DLYSR VVGW+M  RM+ +LV  AL MA+ +RQPK  +++HSD++    ++
Sbjct  58   LYLAVVLDLYSRAVVGWAMHHRMQQALVHAALEMAVARRQPKEEVLLHSDRGSQGGFN  115

6) UM146_21805 in NC_017632


> DQ437743|8|G6|90569623|ABD94693.1|Pseudomonas_aeruginosa_19660|-|2813..3187|-|EXB6|transposase 
derived protein
Length=124

 Score = 86.0 bits (307),  Expect = 1e-18, Method: Compositional matrix adjust.
 Identities = 46/100 (46%), Positives = 70/100 (70%), Gaps = 0/100 (0%)

Query  21   LRRQGLRAKASRKFSPVSYRAHGLPVLENLLEQDFSASGPNQKWAGDITYLRTDEGWLYL  80
            +R  GLR ++ ++   VS   H+LP+  N L+++F++  +N+ W +D+TY+RT +GWLYL
Sbjct  1    MREAGLRVRSRKRWRLVSSSRHALPIAPNHLDRQFASDRANRHWVSDMTYVRTTQGWLYL  60

Query  81   AVVIDLWSRAVIGWSMSPRMTAQLACDALQMALWRRRRPE  120
            AVV+DL SRAV+GW+M  RM   L   AL+MA+ RR+  E
Sbjct  61   AVVLDLYSRAVVGWAMHHRMQQALVHAALEMAVARRQPKE  100

7) JCM7686_pAMI8p198 in NC_022050


> DQ437743|8|G6|90569623|ABD94693.1|Pseudomonas_aeruginosa_19660|-|2813..3187|-|EXB6|transposase 
derived protein
Length=124

 Score = 85.7 bits (306),  Expect = 1e-18, Method: Compositional matrix adjust.
 Identities = 50/107 (47%), Positives = 73/107 (69%), Gaps = 0/107 (0%)

Query  30   MPIAGIKAQIGYKRRPGSYGGKPSVVVDNTLDRQFDVEAPDRVWVTDITYIRTLEGFVYL  89
            M  AG++ +   ++R  S +  +  +  N LDRQF  + ++R WV+D+TY+RT +G +YL
Sbjct  1    MREAGLRVRSRKRWRLVSSSRHALPIAPNHLDRQFASDRANRHWVSDMTYVRTTQGWLYL  60

Query  90   AVVIDLYSRRVIGWSMQSRQTTDVVLQALLMAVWRRKPKGKVLIHSD  136
            AVV+DLYSR V+GW+M+ R    +V  AL MAV RR+PK  VL+HSD
Sbjct  61   AVVLDLYSRAVVGWAMHHRMQQALVHAALEMAVARRQPKEEVLLHSD  107

8) Neut_2189 in NC_008344


> DQ437743|8|G6|90569623|ABD94693.1|Pseudomonas_aeruginosa_19660|-|2813..3187|-|EXB6|transposase 
derived protein
Length=124

 Score = 85.2 bits (304),  Expect = 2e-18, Method: Compositional matrix adjust.
 Identities = 48/90 (54%), Positives = 62/90 (69%), Gaps = 1/90 (1%)

Query  32   MRENGLCPIWKRKFINTTDSKHDYPVAPNLLDRQFNVAQPNQAWVSDITYIRTRQGWLYL  91
            MRE GL    +++    + S+H  P+APN LDRQF   ++N+ WVSD+TY+RT QGWLYL
Sbjct  1    MREAGLRVRSRKRWRLVSSSRHALPIAPNHLDRQFASDRANRHWVSDMTYVRTTQGWLYL  60

Query  92   AAVMDLYSRKIIGWAIMAPTMPAELVVAAL  121
            A V+DLYSR ++GWA M   M   LV AAL
Sbjct  61   AVVLDLYSRAVVGWA-MHHRMQQALVHAAL  89

9) C427_1061 in NC_020514


> DQ437743|8|G6|90569623|ABD94693.1|Pseudomonas_aeruginosa_19660|-|2813..3187|-|EXB6|transposase 
derived protein
Length=124

 Score = 82.3 bits (293),  Expect = 2e-17, Method: Compositional matrix adjust.
 Identities = 44/107 (42%), Positives = 72/107 (68%), Gaps = 0/107 (0%)

Query  6    LVVTRRIAYKVTTKQKHSDAVADNLLNMNFNPVGPNQIWAGDVSYLKTGEGCLYLAIVMD  65
            L V  R   ++ +  +H+ ++A N L+ +F +  +N+ W +D++Y++T +G LYLA+V+D
Sbjct  6    LRVRSRKRWRLVSSSRHALPIAPNHLDRQFASDRANRHWVSDMTYVRTTQGWLYLAVVLD  65

Query  66   LYSRRIVGWHISKRMTRDLVEQALVKAHNLRKPAKGVIFHSDRGSQS  112
            LYSR +VGW +  RM + LV+ AL  A   R+P   V++HSDRGSQ+
Sbjct  66   LYSRAVVGWAMHHRMQQALVHAALEMAVARRQPKEEVLLHSDRGSQG  112

10) S1431 in NC_004741


> DQ437743|8|G6|90569623|ABD94693.1|Pseudomonas_aeruginosa_19660|-|2813..3187|-|EXB6|transposase 
derived protein
Length=124

 Score = 71.8 bits (253),  Expect = 2e-14, Method: Compositional matrix adjust.
 Identities = 47/111 (43%), Positives = 70/111 (64%), Gaps = 1/111 (0%)

Query  1    MKELGLVSCQQPTHRYKRGGHEHVAI-PNYLERQFAVTEPNQVWCGDVTYIWTGKRWAYL  59
            M+E GL    +   R   ++++ ++I PN L+RQFA   +N+ W +D+TY++T + W YL
Sbjct  1    MREAGLRVRSRKRWRLVSSSRHALPIAPNHLDRQFASDRANRHWVSDMTYVRTTQGWLYL  60

Query  60   AVVLDLFARKPVGWAMSFSPDSRLTMKALEMAWETRGKPGGVMFHSDQGSH  110
            AVVLDL++R  VGWAM    +  L   ALEMA   R     V++HSD+GS+
Sbjct  61   AVVLDLYSRAVVGWAMHHRMQQALVHAALEMAVARRQPKEEVLLHSDRGSQ  111

11) Atc_0502 in NC_015850


> DQ437743|8|G6|90569623|ABD94693.1|Pseudomonas_aeruginosa_19660|-|2813..3187|-|EXB6|transposase 
derived protein
Length=124

 Score = 69.7 bits (245),  Expect = 9e-14, Method: Compositional matrix adjust.
 Identities = 38/89 (43%), Positives = 65/89 (74%), Gaps = 2/89 (2%)

Query  7    PCTLDRVKRQFTAERPNQLWVPDFTYVSTWQGWVYVAFVIDVFARSIVAWRVSRSMTTNF  66
            P + +++ RQF+++R+N+ WV+D TYV T QGW+Y+A V+D+++R++V+W + + M   +
Sbjct  25   PIAPNHLDRQFASDRANRHWVSDMTYVRTTQGWLYLAVVLDLYSRAVVGWAMHHRMQQAL  84

Query  67   VLDALGQALYTRQPERNQTLIHHSDTGSQ  95
            V  AL  A+  RQP +++ L+ HSD GSQ
Sbjct  85   VHAALEMAVARRQP-KEEVLL-HSDRGSQ  111

12) AZL_f00520 in NC_013860


> DQ437743|8|G6|90569623|ABD94693.1|Pseudomonas_aeruginosa_19660|-|2813..3187|-|EXB6|transposase 
derived protein
Length=124

 Score = 63.1 bits (220),  Expect = 1e-11, Method: Compositional matrix adjust.
 Identities = 38/88 (44%), Positives = 61/88 (70%), Gaps = 2/88 (2%)

Query  1    MPADRMNRQFQAPRPNALWVADFTYVSTWQGFVYVAFVIDAFARRIVGWRVSSTAHAGFV  60
            +++++++RQF + R+N  WV+D TYV T QG +Y+A V+D ++R +VGW +    + ++V
Sbjct  26   IAPNHLDRQFASDRANRHWVSDMTYVRTTQGWLYLAVVLDLYSRAVVGWAMHHRMQQALV  85

Query  61   LDALEQALHDRRPAKGSGLIHHSDRGSQ  88
              ALE A+  RR +K   L+ HSDRGSQ
Sbjct  86   HAALEMAV-ARRQPKEEVLL-HSDRGSQ  111

13) SARI_02034 in NC_010067


> DQ437743|8|G6|90569623|ABD94693.1|Pseudomonas_aeruginosa_19660|-|2813..3187|-|EXB6|transposase 
derived protein
Length=124

 Score = 60.5 bits (210),  Expect = 5e-11, Method: Compositional matrix adjust.
 Identities = 38/92 (42%), Positives = 61/92 (67%), Gaps = 1/92 (1%)

Query  18   MKEPGLVSCQQPAHRYKRGGHEHIAI-PNHPERQFAVTETNQVWCGNVTYIWTGKRWAYL  76
            M+E+GL    +   R   ++++ ++I PNH +RQFA   +N+ W +++TY++T + W YL
Sbjct  1    MREAGLRVRSRKRWRLVSSSRHALPIAPNHLDRQFASDRANRHWVSDMTYVRTTQGWLYL  60

Query  77   AVVLDLFARKPVGRAMLFSLDSRLTIKALEMA  108
            AVVLDL++R  VG+AM   ++  L   ALEMA
Sbjct  61   AVVLDLYSRAVVGWAMHHRMQQALVHAALEMA  92