Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
type III helper protein HrpK1 |
NC_004578 (Pseudomonas syringae DC3000) |
0.0 |
100 |
|
type III helper protein HrpK1 |
NC_007005 (Pseudomonas syringae B728a) |
0.0 |
82 |
|
type III effector HrpK1 |
NC_005773 (Pseudomonas syringae 1448A) |
0.0 |
82 |
|
Pathogenicity locus protein hrpK |
NC_017445 (Erwinia sp. Ejp617) |
5e-127 |
46 |
|
hrp/hrc type III secretion system-type III effector HrpK |
NC_012214 (Erwinia pyrifoliae Ep1/96) |
1e-125 |
45 |
|
Pathogenicity locus protein hrpK |
NC_017390 (Erwinia pyrifoliae DSM 12163) |
3e-125 |
45 |
|
Pathogenicity locus protein hrpK |
NC_013961 (Erwinia amylovora CFBP1430) |
2e-112 |
43 |
|
type III secretion system protein |
NC_013971 (Erwinia amylovora ATCC 49946) |
3e-112 |
43 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='AF232004' AND ph.id_pai_orf='8' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc