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Homologs of unnamed gene of AF139596

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) SFV_0255
( YP_687836.1 )

phage tail fiber protein

NC_008258
(Shigella flexneri 8401)

6e-72

2) SF0310
( NP_706262.1 )

phage tail fiber protein

NC_004337
(Shigella flexneri 301)

3e-58

3) S4801
( NP_836038.1 )

phage tail fibre protein

NC_004741
(Shigella flexneri 2457T)

2e-56

4) 22
( YP_003932294.1 )

tail fiber assembly protein (P37)

NC_014562
(Pantoea vagans C9-1)

4e-26

5) ECENHK_12610
( YP_006579005.1 )

tail assembly chaperone gp38

NC_018405
(Enterobacter cloacae ENHKU01)

3e-25

6) Entas_4665
( YP_004830962.1 )

tail assembly chaperone gp38

NC_015969
(Enterobacter asburiae LF7a)

3e-24

7) SG1806
( YP_455486.1 )

hypothetical protein

NC_007712
(Sodalis glossinidius morsitans)

1e-22

8) plu3023
( NP_930255.1 )

hypothetical protein

NC_005126
(Photorhabdus luminescens TTO1)

8e-19

9) ECUMN_0993
( YP_002411746.1 )

putative tail fiber assembly protein from bacteriophage origin

NC_011751
(Escherichia coli UMN026)

8e-19

10) ECL_02831
( YP_003613321.1 )

putative tail fiber protein

NC_014121
(Enterobacter cloacae ATCC 13047)

1e-18

11) plu2956
( NP_930190.1 )

hypothetical protein

NC_005126
(Photorhabdus luminescens TTO1)

2e-18

12) plu2958
( NP_930192.1 )

hypothetical protein

NC_005126
(Photorhabdus luminescens TTO1)

4e-18

13) PAU_01582
( YP_003040418.1 )

phage tail fiber assembly protein

NC_012962
(Photorhabdus asymbiotica ATCC 43949)

4e-16

14) D781_0814
( YP_007343340.1 )

Caudovirales tail fiber assembly protein

NC_020064
(Serratia marcescens FGI94)

1e-15

15) yfdK
( YP_003042749.1 )

hypothetical protein

NC_012962
(Photorhabdus asymbiotica ATCC 43949)

2e-13

16) PAGR_g0678
( YP_005991434.1 )

phage tail assembly chaperone gp38

NC_017554
(Pantoea ananatis PA13)

2e-08

• Sequence Alignments

1) SFV_0255 in NC_008258


> AF139596|8|G8|6453804|AAF09028.1|Shigella_flexneri_Y53|-|6625..7128|-|-|unknown
Length=167

 Score =  262 bits (981),  Expect = 6e-72, Method: Compositional matrix adjust.
 Identities = 162/166 (98%), Positives = 162/166 (98%), Gaps = 0/166 (0%)

Query  1    MSITLDLILQCRPVQDMVHLLMRITLQWDINEMSYFYSASTNGFYSTEFHGTNIPDDAVE  60
            MS TLDLILQCRPVQDMVHLLMRITLQWDINEMSYFYSASTNGFYSTEFHGTNIPDDAVE
Sbjct  1    MSRTLDLILQCRPVQDMVHLLMRITLQWDINEMSYFYSASTNGFYSTEFHGTNIPDDAVE  60

Query  61   ISESEWKTLINSQSVTKMITCGENGHPVIVDRPSPTPEQLALINNEKKSALIAEATNVIA  120
            ISESEWKTLINSQSVTKMITCGENGHPVIVDRPSPTPEQLALINNEKKSALIAEATNVIA
Sbjct  61   ISESEWKTLINSQSVTKMITCGENGHPVIVDRPSPTPEQLALINNEKKSALIAEATNVIA  120

Query  121  PLQDAVDLDMATDDETKLLLAWKKYRVLLMRVDIKNIEWPKKPEEN  166
            PLQDAVDLDMATDDETKLLLAWKKYR LLMRVDIKN EWPKKPE N
Sbjct  121  PLQDAVDLDMATDDETKLLLAWKKYRALLMRVDIKNTEWPKKPESN  166

2) SF0310 in NC_004337


> AF139596|8|G8|6453804|AAF09028.1|Shigella_flexneri_Y53|-|6625..7128|-|-|unknown
Length=167

 Score =  217 bits (807),  Expect = 3e-58, Method: Compositional matrix adjust.
 Identities = 130/143 (91%), Positives = 137/143 (96%), Gaps = 0/143 (0%)

Query  1    MRITLQWDINKMSYFYSASTNGFYSTEFHGTNIPDDAVEISESEWKTLINAQSVTKMITC  60
            MRITLQWDIN MSYFYSASTNGFYSTEFHGTNIPDDAVEISESEWKTLIN+QSVTKMITC
Sbjct  22   MRITLQWDINEMSYFYSASTNGFYSTEFHGTNIPDDAVEISESEWKTLINSQSVTKMITC  81

Query  61   GENGHPVIVDRPSPTPEQLALINDEKKSALIAEATNVIAPLQDAVDLGMATDDETKLLLA  120
            GENGHPVIVDRPSPTPEQLALIN+EKKSALIAEATNVIAPLQDAVDL+MATDDETKLLLA
Sbjct  82   GENGHPVIVDRPSPTPEQLALINNEKKSALIAEATNVIAPLQDAVDLDMATDDETKLLLA  141

Query  121  WKKYRVLLMRVNVVKPEWPMHPN  143
            WKKYR LLMRV++ + EWP  P+
Sbjct  142  WKKYRALLMRVDIKNTEWPKKPE  164

3) S4801 in NC_004741


> AF139596|8|G8|6453804|AAF09028.1|Shigella_flexneri_Y53|-|6625..7128|-|-|unknown
Length=167

 Score =  211 bits (785),  Expect = 2e-56, Method: Compositional matrix adjust.
 Identities = 132/138 (96%), Positives = 135/138 (98%), Gaps = 0/138 (0%)

Query  1    MSRTLDLILLCRPVQDTVHLLMRITLQWDINKMSYFYSASTNGFYSTEFHGTNIPDDAVE  60
            MSRTLDLIL CRPVQD VHLLMRITLQWDIN MSYFYSASTNGFYSTEFHGTNIPDDAVE
Sbjct  1    MSRTLDLILQCRPVQDMVHLLMRITLQWDINEMSYFYSASTNGFYSTEFHGTNIPDDAVE  60

Query  61   ISESEWKTLINAQSVTKMITCGENGHPVIVDRPSPTPEQLALINDEKKSALIAEATNVIA  120
            ISESEWKTLIN+QSVTKMITCGENGHPVIVDRPSPTPEQLALIN+EKKSALIAEATNVIA
Sbjct  61   ISESEWKTLINSQSVTKMITCGENGHPVIVDRPSPTPEQLALINNEKKSALIAEATNVIA  120

Query  121  PLQDAVDLGMATDDETKL  138
            PLQDAVDL+MATDDETKL
Sbjct  121  PLQDAVDLDMATDDETKL  138

4) 22 in NC_014562


> AF139596|8|G8|6453804|AAF09028.1|Shigella_flexneri_Y53|-|6625..7128|-|-|unknown
Length=167

 Score =  110 bits (402),  Expect = 4e-26, Method: Compositional matrix adjust.
 Identities = 63/128 (50%), Positives = 92/128 (72%), Gaps = 4/128 (3%)

Query  4    YSPSNNAFYDTAINRV-IPEDAINITEQAWADLLAGQAKGKLIACGADLRPYLTEQPLPT  62
            YS+S N+FY T ++   IP+DA++I+E  W  L+ +Q+  K+I+CG + +P + ++P PT
Sbjct  37   YSASTNGFYSTEFHGTNIPDDAVEISESEWKTLINSQSVTKMITCGENGHPVIVDRPSPT  96

Query  63   AEELISQAEEKRSRLRAEADTAIQPLQDASDLGIATEDEASKLLAWKKYRVMLMRLDISN  122
            +E+L    +EK+S L AEA   I PLQDA DL++AT+DE+  LLAWKKYR +LMR+DI N
Sbjct  97   PEQLALINNEKKSALIAEATNVIAPLQDAVDLDMATDDETKLLLAWKKYRALLMRVDIKN  156

Query  123  AEKIIWPK  130
            +E   WPK
Sbjct  157  TE---WPK  161

5) ECENHK_12610 in NC_018405


> AF139596|8|G8|6453804|AAF09028.1|Shigella_flexneri_Y53|-|6625..7128|-|-|unknown
Length=167

 Score =  107 bits (390),  Expect = 3e-25, Method: Compositional matrix adjust.
 Identities = 59/134 (45%), Positives = 93/134 (70%), Gaps = 4/134 (2%)

Query  1    MNYYFSKTTLGFYCDEVN-KSTPADAVEISEESYFSLREGQSTGKVIAADEAGNPILVDP  59
            M+Y++S +T GFY  E +  + P DAVEISE    +L ++QS  K+I+ +E G+P++VD 
Sbjct  33   MSYFYSASTNGFYSTEFHGTNIPDDAVEISESEWKTLINSQSVTKMITCGENGHPVIVDR  92

Query  60   PEPSADALIALAEETRTALMAEANARITPLQDAYELGIDTGEEAELLTRWKRYRVMLNRL  119
            P P+++ L  + +E ++AL+AEA   I+PLQDA +L++ T++E+ LL  WK+YR +L R+
Sbjct  93   PSPTPEQLALINNEKKSALIAEATNVIAPLQDAVDLDMATDDETKLLLAWKKYRALLMRV  152

Query  120  DITAAPSIEWPEKP  133
            DI  +   EWP KP
Sbjct  153  DIKNT---EWPKKP  163

6) Entas_4665 in NC_015969


> AF139596|8|G8|6453804|AAF09028.1|Shigella_flexneri_Y53|-|6625..7128|-|-|unknown
Length=167

 Score =  104 bits (377),  Expect = 3e-24, Method: Compositional matrix adjust.
 Identities = 63/135 (47%), Positives = 88/135 (66%), Gaps = 4/135 (2%)

Query  1    MNYYFSKAELGFYCDEVNES-IPADAVEISEELYFSLLEGQSTGKVIAANLAGTPVLTDP  59
            M+Y++S +  GFY  E + + IP DAVEISE    +L+++QS  K+I+    G PV+ D 
Sbjct  33   MSYFYSASTNGFYSTEFHGTNIPDDAVEISESEWKTLINSQSVTKMITCGENGHPVIVDR  92

Query  60   PEPTAEELVAQAEETRTVLMKEANARILPLQDAFDLGLETDEEKQLLLAWKKYRVLLNRV  119
            P PT+E+L    +E ++ L+ EA   I PLQDA DL++ TD+E +LLLAWKKYR LL RV
Sbjct  93   PSPTPEQLALINNEKKSALIAEATNVIAPLQDAVDLDMATDDETKLLLAWKKYRALLMRV  152

Query  120  IASNAPDIIWPDKPE  134
               +  +  WP KPE
Sbjct  153  ---DIKNTEWPKKPE  164

7) SG1806 in NC_007712


> AF139596|8|G8|6453804|AAF09028.1|Shigella_flexneri_Y53|-|6625..7128|-|-|unknown
Length=167

 Score = 99.4 bits (358),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 64/140 (46%), Positives = 93/140 (67%), Gaps = 9/140 (6%)

Query  3    DYFYSATTNGFYHISMKSIYEDSDNGWPEDAVPVSNELYQALLEGQSKNKIIKANKNGMP  62
             YFYSA+TNGFY       +++++   P+DAV +S+   ++L+++QS  K+I    NG P
Sbjct  34   SYFYSASTNGFYSTE----FHGTNI--PDDAVEISESEWKTLINSQSVTKMITCGENGHP  87

Query  63   VLGDRPAPTEEQNLSMAQSKKSMLLEQATGKIIPLQDAVDLNMATQVEETTLLMWKKYRV  122
            V+ DRP+PT EQ   + + KKS L+ +AT  I PLQDAVDL+MAT+ E   LL WKKYR 
Sbjct  88   VIVDRPSPTPEQLALINNEKKSALIAEATNVIAPLQDAVDLDMATDDETKLLLAWKKYRA  147

Query  123  MLTRLDVSKATDIAWPQCPE  142
            +L R+D+ ++    WP+ PE
Sbjct  148  LLMRVDIKNT---EWPKKPE  164

8) plu3023 in NC_005126


> AF139596|8|G8|6453804|AAF09028.1|Shigella_flexneri_Y53|-|6625..7128|-|-|unknown
Length=167

 Score = 86.5 bits (309),  Expect = 8e-19, Method: Compositional matrix adjust.
 Identities = 62/138 (45%), Positives = 91/138 (66%), Gaps = 9/138 (6%)

Query  2    YYYSATTNAFYPAEWKQDYINAGSFPNDAVEVNEAIFIEFAGSIPPEGKYRIAGKNGLPE  61
            Y+YSA+TN+FY++E     +++ ++P+DAVE++E+    +  S  +  K    G NG P 
Sbjct  35   YFYSASTNGFYSTE-----FHGTNIPDDAVEISESEWKTLINS-QSVTKMITCGENGHPV  88

Query  62   WADIPPPTKEELqqqakfqkqqLIAEATNQIAPLQDAIDLNMANDEEKAQLVAWKKYQIS  121
              D P+PT E+L    + +K  LIAEATN IAPLQDA+DL+MA D+E   L+AWKKY+  
Sbjct  89   IVDRPSPTPEQLALINNEKKSALIAEATNVIAPLQDAVDLDMATDDETKLLLAWKKYRAL  148

Query  122  LSRIDVTLAPDINWPKKP  139
            L R+D+    + +WPKKP
Sbjct  149  LMRVDIK---NTEWPKKP  163

9) ECUMN_0993 in NC_011751


> AF139596|8|G8|6453804|AAF09028.1|Shigella_flexneri_Y53|-|6625..7128|-|-|unknown
Length=167

 Score = 86.5 bits (309),  Expect = 8e-19, Method: Compositional matrix adjust.
 Identities = 54/133 (41%), Positives = 82/133 (62%), Gaps = 4/133 (3%)

Query  17   YYYSYSAKGFFWLSADELKGKDIPADLIPVSEEDHAALFLGQEQGKYINHTPDG-PLLVD  75
            Y+YS S++GF+   + E+ G +IP D + +SE +  +L+ +Q   K I    +G P++VD
Sbjct  35   YFYSASTNGFY---STEFHGTNIPDDAVEISESEWKTLINSQSVTKMITCGENGHPVIVD  91

Query  76   QPDYSPEELIAQAEIKKEKLLSEAEVVIAPLARAVKLKIATDEEIALLEAWELYSVMVNR  135
            +P  +PE+L    + KK  L++EA  VIAPL  AV L +ATD+E  LL AW  Y  ++ R
Sbjct  92   RPSPTPEQLALINNEKKSALIAEATNVIAPLQDAVDLDMATDDETKLLLAWKKYRALLMR  151

Query  136  VDTSDPEWPEVPD  148
            VD  + EWP  P+
Sbjct  152  VDIKNTEWPKKPE  164

10) ECL_02831 in NC_014121


> AF139596|8|G8|6453804|AAF09028.1|Shigella_flexneri_Y53|-|6625..7128|-|-|unknown
Length=167

 Score = 86.0 bits (307),  Expect = 1e-18, Method: Compositional matrix adjust.
 Identities = 56/132 (43%), Positives = 87/132 (66%), Gaps = 10/132 (7%)

Query  2    GFYDDVMKADYEAADSWPDDAMLVSDL-WYQKLIEGQSAGKIISVNEYGQPVLADPELPE  60
            GFY     +++++++  PDDA+ +S+  W + LI++QS  K+I+  E G+PV+ D   P 
Sbjct  43   GFYS----TEFHGTNI-PDDAVEISESEW-KTLINSQSVTKMITCGENGHPVIVDRPSPT  96

Query  61   KEKPVQEAESRKSGLLQAASDAIAPLQDAVDLDIATAEENALLLAWKKYRVLINRVDTSK  120
             E+     + +KS+L+  A++ IAPLQDAVDLD+AT +E  LLLAWKKYR L+ RVD  +
Sbjct  97   PEQLALINNEKKSALIAEATNVIAPLQDAVDLDMATDDETKLLLAWKKYRALLMRVDIKN  156

Query  121  APDIDWPEVPGN  132
            +   +WP  P +
Sbjct  157  T---EWPKKPES  165

11) plu2956 in NC_005126


> AF139596|8|G8|6453804|AAF09028.1|Shigella_flexneri_Y53|-|6625..7128|-|-|unknown
Length=167

 Score = 85.2 bits (304),  Expect = 2e-18, Method: Compositional matrix adjust.
 Identities = 57/138 (42%), Positives = 88/138 (64%), Gaps = 9/138 (6%)

Query  2    YYYSAKTNGFYPIELEQNYIASGSLPDDVIEVSLDIYQEYAANNAPEGKYRIAGQNGLPE  61
            Y+YSA TNGFY+ E++     + ++PDD +E+S    +    +++   K    G+NG P 
Sbjct  35   YFYSASTNGFYSTEFH-----GTNIPDDAVEISESEWKTLINSQSV-TKMITCGENGHPV  88

Query  62   WADISPPTKEELQQYVESKKQQFIVESSQQIAPLQDAVDLGIATQEEEAALLVWKKYRVM  121
              D ++PT E+L    + KK  +I E+++ IAPLQDAVDL++AT++E   LL WKKYR +
Sbjct  89   IVDRPSPTPEQLALINNEKKSALIAEATNVIAPLQDAVDLDMATDDETKLLLAWKKYRAL  148

Query  122  LNRIDISQAPDIEWPEQP  139
            L R+DI ++   EWP +P
Sbjct  149  LMRVDIKNT---EWPKKP  163

12) plu2958 in NC_005126


> AF139596|8|G8|6453804|AAF09028.1|Shigella_flexneri_Y53|-|6625..7128|-|-|unknown
Length=167

 Score = 84.2 bits (300),  Expect = 4e-18, Method: Compositional matrix adjust.
 Identities = 58/138 (43%), Positives = 85/138 (62%), Gaps = 9/138 (6%)

Query  2    YFYSAKTNSFYPIELEQNYIASGSLPDDIIEVGLDIYQEYAANNVPEGKYRIAGQNGLPE  61
            YFYSA TN+FY+ E++     + ++PDD +E++    +    ++ +  K    G+NG P 
Sbjct  35   YFYSASTNGFYSTEFH-----GTNIPDDAVEISESEWKTLINSQ-SVTKMITCGENGHPV  88

Query  62   WADIPPPTREELQQYIESKKQQFIVEASQQIAPLQDAVDLRIATKEEEAALLVWKKYRVM  121
              D P+PT E+L    + KK  +I EA++ IAPLQDAVDL +AT +E   LL WKKYR +
Sbjct  89   IVDRPSPTPEQLALINNEKKSALIAEATNVIAPLQDAVDLDMATDDETKLLLAWKKYRAL  148

Query  122  LNRIDISLAPDIEWPEQP  139
            L R+DI    + EWP +P
Sbjct  149  LMRVDIK---NTEWPKKP  163

13) PAU_01582 in NC_012962


> AF139596|8|G8|6453804|AAF09028.1|Shigella_flexneri_Y53|-|6625..7128|-|-|unknown
Length=167

 Score = 77.9 bits (276),  Expect = 4e-16, Method: Compositional matrix adjust.
 Identities = 57/138 (42%), Positives = 84/138 (61%), Gaps = 9/138 (6%)

Query  2    YYYSATTNAFYPVEWKQDYINAGSFPNDAVEVDKSVFIEFAGSIPPKGKYRIAGKNGLPE  61
            Y+YSA+TN+FY+ E     +++ ++P+DAVE+  S    +  S  +  K    G NG P 
Sbjct  35   YFYSASTNGFYSTE-----FHGTNIPDDAVEISESEWKTLINS-QSVTKMITCGENGHPV  88

Query  62   WADIPPPTKEELISIAESQKAQFISLANEKIMPLSDAEELDIATDEEMLLLKEWKKYRVM  121
              D P+PT E+L  I + +K+ +I+ A + I PL DA +LD+ATD+E  LL  WKKYR +
Sbjct  89   IVDRPSPTPEQLALINNEKKSALIAEATNVIAPLQDAVDLDMATDDETKLLLAWKKYRAL  148

Query  122  LNRVDTSNAPEIDWPITP  139
            L RVD  N+   +WP  P
Sbjct  149  LMRVDIKNT---EWPKKP  163

14) D781_0814 in NC_020064


> AF139596|8|G8|6453804|AAF09028.1|Shigella_flexneri_Y53|-|6625..7128|-|-|unknown
Length=167

 Score = 75.7 bits (268),  Expect = 1e-15, Method: Compositional matrix adjust.
 Identities = 61/141 (44%), Positives = 80/141 (57%), Gaps = 8/141 (5%)

Query  1    MTYGYSATTNTFYVIENKAGYEQFGNWPTDVKPVPDKVWETFIEQGPPGKMRGASENGFP  60
            M+Y YSA+TN FY  E  +      N P D   +++  W T+I+  +  KM   +ENG P
Sbjct  33   MSYFYSASTNGFYSTEFHGT-----NIPDDAVEISESEWKTLINSQSVTKMITCGENGHP  87

Query  61   TWVDIPAPTQEQAIESATIQKVRLMAEATKTIAPLQDADDLGIATADELEKLKSWKIYRV  120
              VD P+PT EQ       +K  L+AEAT+ IAPLQDA DL++AT DE   L +WK YR 
Sbjct  88   VIVDRPSPTPEQLALINNEKKSALIAEATNVIAPLQDAVDLDMATDDETKLLLAWKKYRA  147

Query  121  QLSRLTPEDAPNIRWPLTPEA  141
             L R+   D  N  WP  PE+
Sbjct  148  LLMRV---DIKNTEWPKKPES  165

15) yfdK in NC_012962


> AF139596|8|G8|6453804|AAF09028.1|Shigella_flexneri_Y53|-|6625..7128|-|-|unknown
Length=167

 Score = 68.9 bits (242),  Expect = 2e-13, Method: Compositional matrix adjust.
 Identities = 60/139 (44%), Positives = 82/139 (59%), Gaps = 9/139 (6%)

Query  2    YYYSAKKNAFYPIELKKNYIAAGSLPDDITEVSNDIYQEYAASSAPEGKYRIAGKNGLPE  61
            Y+YSA  N+FY+ E+      + ++PDD  E+S+   +    S +   K    G NG P 
Sbjct  35   YFYSASTNGFYSTEFH-----GTNIPDDAVEISESEWKTLINSQSV-TKMITCGENGHPV  88

Query  62   WADIPPPTkeelqqhaklkkqqlMIEATNQIALLQDAVDLDIATEEERTALLAWKEYRVM  121
              D P+PT E+L    + KK  L+ EATN IA LQDAVDLD+AT++E   LLAWK YR +
Sbjct  89   IVDRPSPTPEQLALINNEKKSALIAEATNVIAPLQDAVDLDMATDDETKLLLAWKKYRAL  148

Query  122  LNRIDISQEMDIDWPELPE  140
            L R+DI    + +WP  PE
Sbjct  149  LMRVDIK---NTEWPKKPE  164

16) PAGR_g0678 in NC_017554


> AF139596|8|G8|6453804|AAF09028.1|Shigella_flexneri_Y53|-|6625..7128|-|-|unknown
Length=167

 Score = 51.9 bits (177),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 57/139 (42%), Positives = 78/139 (57%), Gaps = 8/139 (5%)

Query  4    TYFYSASTNCFYPQSMRAVYESQGGLPADCAEVSGAVAAEFMGAAPEGKYRAPGTGGAPA  63
            +YFYSASTN FY+   ++       +P D  E+S +    ++ + +  K  + G  G P 
Sbjct  34   SYFYSASTNGFYSTEFHG-----TNIPDDAVEISESEWKTLINSQSVTKMITCGENGHPV  88

Query  64   WVDLPEPtrdqlaaaaasrrqalltaataaiaplqdaVDLDMAQEAEKVQLTAWKKYRVL  123
             VD P PT +QLA     ++ AL++ AT  IAPLQDAVDLDMA + E   L AWKKYR L
Sbjct  89   IVDRPSPTPEQLALINNEKKSALIAEATNVIAPLQDAVDLDMATDDETKLLLAWKKYRAL  148

Query  124  VNRISPADAPDISWPDTPA  142
            + R+   D  +  WP  P 
Sbjct  149  LMRV---DIKNTEWPKKPE  164