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Homologs of SE0100 gene of NC_004461_R1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) SE0100
( NP_763655.1 )

transposase

NC_004461
(Staphylococcus epidermidis ATCC 12228)

8e-14

100

2) A284_00535
( YP_007383882.1 )

transposase

NC_020164
(Staphylococcus warneri SG1)

1e-09

3) I33_3603
( YP_005558492.1 )

transposase

NC_017195
(Bacillus subtilis RO-NN-1)

6e-07

4) BN419_0185
( YP_007605522.1 )

Undefined function

NC_020558
(Listeria monocytogenes N53-1)

2e-06

5) BATR1942_19685
( YP_003975783.1 )

transposase

NC_014639
(Bacillus atrophaeus 1942)

2e-05

6) BCG9842_B2804
( YP_002445916.1 )

1-related, transposase

NC_011772
(Bacillus cereus G9842)

2e-04

7) STH8232_1842
( YP_006041460.1 )

hypothetical protein

NC_017581
(Streptococcus thermophilus JIM 8232)

3e-04

8) Y1U_C1494
( YP_006340608.1 )

hypothetical protein

NC_017927
(Streptococcus thermophilus MN-ZLW-002)

3e-04

9) STND_1534
( YP_006003074.1 )

Putative transposase

NC_017563
(Streptococcus thermophilus ND03)

3e-04

10) SH0027
( YP_251942.1 )

hypothetical protein

NC_007168
(Staphylococcus haemolyticus JCSC1435)

0.014

• Sequence Alignments

1) SE0100 in NC_004461


> NC_004461_R1|78|G78|27467018|NP_763655.1|Staphylococcus_epidermidis_ATCC_12228|+|65032..65163|-|SE0100|transposase
Length=43

 Score = 70.5 bits (248),  Expect = 8e-14, Method: Compositional matrix adjust.
 Identities = 43/43 (100%), Positives = 43/43 (100%), Gaps = 0/43 (0%)

Query  1   MKRVSYSVETKYKAVEMKAAGFSTKEIMKELNIRNRTQVKTWW  43
           MKRVSYSVETKYKAVEMKAAGFSTKEIMKELNIRNRTQVKTWW
Sbjct  1   MKRVSYSVETKYKAVEMKAAGFSTKEIMKELNIRNRTQVKTWW  43

2) A284_00535 in NC_020164


> NC_004461_R1|78|G78|27467018|NP_763655.1|Staphylococcus_epidermidis_ATCC_12228|+|65032..65163|-|SE0100|transposase
Length=43

 Score = 56.6 bits (195),  Expect = 1e-09, Method: Compositional matrix adjust.
 Identities = 32/39 (83%), Positives = 33/39 (85%), Gaps = 0/39 (0%)

Query  1   MKRMSYSVEITYKAVEMKAVGFSTKEIMKELTIRNRGSV  39
           MKR+SYSVE  YKAVEMKA GFSTKEIMKEL IRNR  V
Sbjct  1   MKRVSYSVETKYKAVEMKAAGFSTKEIMKELNIRNRTQV  39

3) I33_3603 in NC_017195


> NC_004461_R1|78|G78|27467018|NP_763655.1|Staphylococcus_epidermidis_ATCC_12228|+|65032..65163|-|SE0100|transposase
Length=43

 Score = 47.4 bits (160),  Expect = 6e-07, Method: Compositional matrix adjust.
 Identities = 28/40 (70%), Positives = 35/40 (88%), Gaps = 0/40 (0%)

Query  4   RVSYAVEVKQKAVEMRLAGVPMKEIMQELNIKNKTQVQTW  43
           RVSY+VE K KAVEM+ AG + KEIM+ELNI+N+TQV+TW
Sbjct  3   RVSYSVETKYKAVEMKAAGFSTKEIMKELNIRNRTQVKTW  42

4) BN419_0185 in NC_020558


> NC_004461_R1|78|G78|27467018|NP_763655.1|Staphylococcus_epidermidis_ATCC_12228|+|65032..65163|-|SE0100|transposase
Length=43

 Score = 45.8 bits (154),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 28/41 (69%), Positives = 32/41 (79%), Gaps = 0/41 (0%)

Query  4   RVMYPAEIKEKAIKMKLAGKSTKEIMRTLNIKNPTQVKTWW  44
           RV Y+ E K KA+ MK AG STKEIM+ LNI+N TQVKTWW
Sbjct  3   RVSYSVETKYKAVEMKAAGFSTKEIMKELNIRNRTQVKTWW  43

5) BATR1942_19685 in NC_014639


> NC_004461_R1|78|G78|27467018|NP_763655.1|Staphylococcus_epidermidis_ATCC_12228|+|65032..65163|-|SE0100|transposase
Length=43

 Score = 42.4 bits (141),  Expect = 2e-05, Method: Compositional matrix adjust.
 Identities = 23/37 (63%), Positives = 30/37 (82%), Gaps = 0/37 (0%)

Query  3   RRVSYPVEVKQKAAEMRLAGLPVKEIMQELNIMIKTQ  39
           +RVSY+VE K KA EM+ AG++ KEIM+ELNI  +TQ
Sbjct  2   KRVSYSVETKYKAVEMKAAGFSTKEIMKELNIRNRTQ  38

6) BCG9842_B2804 in NC_011772


> NC_004461_R1|78|G78|27467018|NP_763655.1|Staphylococcus_epidermidis_ATCC_12228|+|65032..65163|-|SE0100|transposase
Length=43

 Score = 39.3 bits (129),  Expect = 2e-04, Method: Compositional matrix adjust.
 Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 0/40 (0%)

Query  4   RVHYPEEVKWKVIEMKKDGYSNWTIMEKLGIKNVSQIKTW  43
           RV Y+ E K K +EMK  G+S   IM  L I+N +Q+KTW
Sbjct  3   RVSYSVETKYKAVEMKAAGFSTKEIMKELNIRNRTQVKTW  42

7) STH8232_1842 in NC_017581


> NC_004461_R1|78|G78|27467018|NP_763655.1|Staphylococcus_epidermidis_ATCC_12228|+|65032..65163|-|SE0100|transposase
Length=43

 Score = 39.0 bits (128),  Expect = 3e-04, Method: Compositional matrix adjust.
 Identities = 22/43 (52%), Positives = 29/43 (68%), Gaps = 0/43 (0%)

Query  1   MVKKAYSVETKLACIEMKKVDKSNKVIMDALGVKNASQVKTWW  43
           M + +YSVETK   +EMK  + S K IM  L ++N +QVKTWW
Sbjct  1   MKRVSYSVETKYKAVEMKAAGFSTKEIMKELNIRNRTQVKTWW  43

8) Y1U_C1494 in NC_017927


> NC_004461_R1|78|G78|27467018|NP_763655.1|Staphylococcus_epidermidis_ATCC_12228|+|65032..65163|-|SE0100|transposase
Length=43

 Score = 39.0 bits (128),  Expect = 3e-04, Method: Compositional matrix adjust.
 Identities = 22/43 (52%), Positives = 29/43 (68%), Gaps = 0/43 (0%)

Query  1   MVKKAYSVETKLACIEMKKVDKSNKVIMDALGVKNASQVKTWW  43
           M + +YSVETK   +EMK  + S K IM  L ++N +QVKTWW
Sbjct  1   MKRVSYSVETKYKAVEMKAAGFSTKEIMKELNIRNRTQVKTWW  43

9) STND_1534 in NC_017563


> NC_004461_R1|78|G78|27467018|NP_763655.1|Staphylococcus_epidermidis_ATCC_12228|+|65032..65163|-|SE0100|transposase
Length=43

 Score = 39.0 bits (128),  Expect = 3e-04, Method: Compositional matrix adjust.
 Identities = 22/43 (52%), Positives = 29/43 (68%), Gaps = 0/43 (0%)

Query  1   MVKKAYSVETKLACIEMKKVDKSNKVIMDALGVKNASQVKTWW  43
           M + +YSVETK   +EMK  + S K IM  L ++N +QVKTWW
Sbjct  1   MKRVSYSVETKYKAVEMKAAGFSTKEIMKELNIRNRTQVKTWW  43

10) SH0027 in NC_007168


> NC_004461_R1|78|G78|27467018|NP_763655.1|Staphylococcus_epidermidis_ATCC_12228|+|65032..65163|-|SE0100|transposase
Length=43

 Score = 32.7 bits (104),  Expect = 0.014, Method: Compositional matrix adjust.
 Identities = 20/31 (65%), Positives = 22/31 (71%), Gaps = 0/31 (0%)

Query  1   MNSVSYSVETKDKVVEMKQNRYSRKEIMDKL  31
           M+ VSYSVETK K VEMK   +S KEIM  L
Sbjct  1   MKRVSYSVETKYKAVEMKAAGFSTKEIMKEL  31