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Homologs of ORF SG65 gene of AF440524

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) PSTAB_2479
( YP_004714849.1 )

hypothetical protein

NC_015740
(Pseudomonas stutzeri ATCC 17588)

4e-34

2) DSC_04120
( YP_004929518.1 )

hypothetical protein

NC_016147
(Pseudoxanthomonas spadix BD-a59)

7e-22

3) Tgr7_2851
( YP_002514911.1 )

hypothetical protein

NC_011901
(Thioalkalivibrio sulfidophilus HL-EbGR7)

1e-19

4) A458_06340
( YP_006456937.1 )

putative transmembrane protein

NC_018028
(Pseudomonas stutzeri CCUG 29243)

2e-19

5) Tmz1t_0956
( YP_002354618.1 )

hypothetical protein

NC_011662
(Thauera sp. MZ1T)

2e-17

6) W5S_1499
( YP_006282465.1 )

putative type III effector Hop protein

NC_017845
(Pectobacterium sp. SCC3193)

2e-14

7) L483_11885
( YP_008094163.1 )

hypothetical protein

NC_021491
(Pseudomonas putida H8234)

1e-12

• Sequence Alignments

1) PSTAB_2479 in NC_015740


> AF440524|78|G65|24461718|AAN62287.1|Pseudomonas_aeruginosa_SG17M|-|79504..79875|ORF 
SG65|-|hypothetical protein
Length=123

 Score =  137 bits (503),  Expect = 4e-34, Method: Compositional matrix adjust.
 Identities = 94/123 (77%), Positives = 113/123 (92%), Gaps = 0/123 (0%)

Query  1    MSMQPLPPADRHHAPGLTFALLLGLCFSAHASADDATFEHARLAAALRQLDSIERLVAQQ  60
            MS + LPPA+RHHA GL +ALLLGL FS+HASADDAT E+ARLAAALRQLDS+ERLVAQQ
Sbjct  1    MSKRLLPPANRHHALGLPLALLLGLYFSGHASADDATPEQARLAAALRQLDSVERLVAQQ  60

Query  61   TAQQRDERARYHFDYARLTADLERVRAGIHDYLTPTRAQPRDPALLLGDYRQSTAALEPL  120
            +A  +DER+RYHFDY+RL+ADLERVR+GI+DYLTP+RAQPRDPA+LLGDYRQ++AA+E  
Sbjct  61   AATVQDERTRYHFDYGRLAADLERVRGGIRDYLTPSRAQPRDPAVLLGDYRQPAAAIETQ  120

Query  121  VTP  123
            V+P
Sbjct  121  VAP  123

2) DSC_04120 in NC_016147


> AF440524|78|G65|24461718|AAN62287.1|Pseudomonas_aeruginosa_SG17M|-|79504..79875|ORF 
SG65|-|hypothetical protein
Length=123

 Score = 96.8 bits (348),  Expect = 7e-22, Method: Compositional matrix adjust.
 Identities = 70/94 (75%), Positives = 87/94 (93%), Gaps = 0/94 (0%)

Query  25   FPVRAQADDASPEHarlaaalrqldaidrlIAQEATRPRDERARYHFDYGRLSADLERVR  84
            F+ +A ADDA+PE+ARLAAALRQLD+++RL+AQ+A+  +DER+RYHFDYGRL+ADLERVR
Sbjct  27   FSGHASADDATPEQARLAAALRQLDSVERLVAQQAATVQDERTRYHFDYGRLAADLERVR  86

Query  85   AGIRDYLTPSRAQPRDPAVLLGDYRQSTAAASCE  118
            +GIRDYLTPSRAQPRDPAVLLGDYRQ++AA   +
Sbjct  87   GGIRDYLTPSRAQPRDPAVLLGDYRQPAAAIETQ  120

3) Tgr7_2851 in NC_011901


> AF440524|78|G65|24461718|AAN62287.1|Pseudomonas_aeruginosa_SG17M|-|79504..79875|ORF 
SG65|-|hypothetical protein
Length=123

 Score = 89.1 bits (319),  Expect = 1e-19, Method: Compositional matrix adjust.
 Identities = 50/90 (56%), Positives = 65/90 (73%), Gaps = 1/90 (1%)

Query  26   FQASVFAGDAT-EPERLAVLMRQLDMLDRLAEHSERLPKQDASRYHFDYARLREDIERVR  84
            F +   A+DAT E  RLA  +RQLD ++RL  +     +++ +RYHFDY+RL  D+ERVR
Sbjct  27   FSGHASADDATPEQARLAAALRQLDSVERLVAQQAATVQDERTRYHFDYGRLAADLERVR  86

Query  85   SGIRDYLTPQRAQPRDPTTLIGDYRQEAED  114
            +GIRDYLTP RAQPRDP+ L+GDYRQ A  
Sbjct  87   GGIRDYLTPSRAQPRDPAVLLGDYRQPAAA  116

4) A458_06340 in NC_018028


> AF440524|78|G65|24461718|AAN62287.1|Pseudomonas_aeruginosa_SG17M|-|79504..79875|ORF 
SG65|-|hypothetical protein
Length=123

 Score = 88.4 bits (316),  Expect = 2e-19, Method: Compositional matrix adjust.
 Identities = 49/89 (56%), Positives = 67/89 (76%), Gaps = 0/89 (0%)

Query  35   DATAEHEQLAALVRQLNLIDRLAEHAANTAPQERTRYHFDYARLRADLNRVRAGLQDYLV  94
            DAT+E+ +LAA +RQL+ ++RL  + A T  +ERTRYHFDY+RL ADL+RVR+G++DYL 
Sbjct  35   DATPEQARLAAALRQLDSVERLVAQQAATVQDERTRYHFDYGRLAADLERVRGGIRDYLT  94

Query  95   PQRAQPRDPVPLAGDYVRRDRADDEEPSP  123
            P RAQPRDP  L GDY +   A + + +P
Sbjct  95   PSRAQPRDPAVLLGDYRQPAAAIETQVAP  123

5) Tmz1t_0956 in NC_011662


> AF440524|78|G65|24461718|AAN62287.1|Pseudomonas_aeruginosa_SG17M|-|79504..79875|ORF 
SG65|-|hypothetical protein
Length=123

 Score = 82.3 bits (293),  Expect = 2e-17, Method: Compositional matrix adjust.
 Identities = 47/93 (51%), Positives = 65/93 (70%), Gaps = 0/93 (0%)

Query  29   VAADSLASEREQLAALTRQLDLLDRLAEHAANTSPQARARYHFDYARLRADLKRVRAGLQ  88
             +AD  ++E+ +LAA  RQLD ++RL  + A T  + R+RYHFDY+RL ADL RVR+G++
Sbjct  31   ASADDATPEQARLAAALRQLDSVERLVAQQAATVQDERTRYHFDYGRLAADLERVRGGIR  90

Query  89   DYLVPQRAQPRDPVPLAGDYVRRDRADDEEPSP  121
            DYL P RAQPRDP  L GDY +   A + + +P
Sbjct  91   DYLTPSRAQPRDPAVLLGDYRQPAAAIETQVAP  123

6) W5S_1499 in NC_017845


> AF440524|78|G65|24461718|AAN62287.1|Pseudomonas_aeruginosa_SG17M|-|79504..79875|ORF 
SG65|-|hypothetical protein
Length=123

 Score = 71.8 bits (253),  Expect = 2e-14, Method: Compositional matrix adjust.
 Identities = 43/94 (46%), Positives = 66/94 (71%), Gaps = 1/94 (1%)

Query  29   TAHADTPSQRQELAAALRQLDALEHFVVQSASRTSTAPGERYHFDYPRLLDDLAHVRAGI  88
            ++  D+ +++  LAAALRQLD++E++V Q A+        RYHFDY RL  DL +VR+GI
Sbjct  31   ASADDATPEQARLAAALRQLDSVERLVAQQAATVQDERT-RYHFDYGRLAADLERVRGGI  89

Query  89   QFHLSPSRAQPRDTTELSSHYRQESVSERSNVSP  122
            +  L+PSRAQPRD + L ++YRQ + +  ++V+P
Sbjct  90   RDYLTPSRAQPRDPAVLLGDYRQPAAAIETQVAP  123

7) L483_11885 in NC_021491


> AF440524|78|G65|24461718|AAN62287.1|Pseudomonas_aeruginosa_SG17M|-|79504..79875|ORF 
SG65|-|hypothetical protein
Length=123

 Score = 65.8 bits (230),  Expect = 1e-12, Method: Compositional matrix adjust.
 Identities = 38/92 (42%), Positives = 61/92 (67%), Gaps = 1/92 (1%)

Query  12   CFVTLSAAAQDVRERSSLGLAQRQITAIELMANRASSRSVDAAGPRYRFDYPRFAADLER  71
             F   ++A +   E++ L+ A RQ+ ++E +  + ++ +V+    RY+FDY R+AADLER
Sbjct  26   YFSGHASADDATPEQARLAAALRQLDSVERLVAQQAA-TVQDERTRYHFDYGRLAADLER  84

Query  72   MRQGIHNYLSPSRAQPADLVEFTGNYRAEAAN  103
            +R GI++YL+PSRAQP D   + G+YR  AA 
Sbjct  85   VRGGIRDYLTPSRAQPRDPAVLLGDYRQPAAA  116