Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
general secretion pathway protein YghD |
NC_008253 (Escherichia coli 536) |
7e-80 |
100 |
|
putative secretion pathway M-type protein, membrane anchored |
NC_017646 (Escherichia coli CE10) |
1e-79 |
99 |
|
putative general secretion pathway protein YghD |
NC_011745 (Escherichia coli ED1a) |
1e-79 |
99 |
|
putative general secretion pathway protein YghD |
NC_011750 (Escherichia coli IAI39) |
1e-79 |
99 |
|
general secretion pathway protein YghD |
NC_011601 (Escherichia coli E2348/69) |
3e-79 |
98 |
|
general secretion pathway protein M-type yghD |
NC_011993 (Escherichia coli LF82) |
4e-79 |
99 |
|
putative general secretion pathway protein YghD |
NC_017634 (Escherichia coli NRG 857C) |
4e-79 |
99 |
|
general secretion pathway protein YghD |
NC_004431 (Escherichia coli CFT073) |
5e-79 |
97 |
|
general secretion pathway protein M |
NC_017628 (Escherichia coli IHE3034) |
6e-79 |
97 |
|
Cholera toxin secretion protein epsM |
NC_022370 (Escherichia coli PMV-1) |
6e-79 |
97 |
|
general secretion pathway protein YghD |
NC_011742 (Escherichia coli S88) |
6e-79 |
97 |
|
putative general secretion pathway protein YghD |
NC_017632 (Escherichia coli UM146) |
6e-79 |
97 |
|
general secretion pathway protein YghD |
NC_007946 (Escherichia coli UTI89) |
6e-79 |
97 |
|
secretion pathway protein, M-type protein, membrane anchored |
NC_012892 (Escherichia coli BL21(DE3)) |
1e-78 |
97 |
|
secretion pathway M-type protein, membrane anchored |
NC_012971 (Escherichia coli BL21(DE3)) |
1e-78 |
97 |
|
putative general secretion pathway protein YghD |
NC_012967 (Escherichia coli REL606) |
1e-78 |
97 |
|
general secretion pathway protein YghD |
NC_008563 (Escherichia coli APEC O1) |
2e-78 |
97 |
|
putative type II secretion protein |
NC_013654 (Escherichia coli SE15) |
2e-78 |
96 |
|
type II secretion system protein M |
NC_017626 (Escherichia coli 042) |
3e-78 |
96 |
|
general secretion pathway protein YghD |
NC_009800 (Escherichia coli HS) |
3e-78 |
97 |
|
general secretion pathway protein M-type yghD |
NC_013941 (Escherichia coli CB9615) |
3e-78 |
95 |
|
putative general secretion pathway protein YghD |
NC_017656 (Escherichia coli RM12579) |
3e-78 |
95 |
|
general secretion pathway protein M |
NC_017625 (Escherichia coli DH1) |
1e-77 |
94 |
|
putative general secretion pathway protein YghD |
NC_017638 (Escherichia coli DH1) |
1e-77 |
94 |
|
general secretion pathway protein YghD |
NC_012947 (Escherichia coli Escherichia coli BL21-Gold(DE3)pLysS AG) |
1e-77 |
94 |
|
putative general secretion pathway protein YghD |
NC_010473 (Escherichia coli K-12) |
1e-77 |
94 |
|
putative general secretion pathway protein YghD |
NC_012759 (Escherichia coli K-12) |
1e-77 |
94 |
|
secretion pathway M-type protein, membrane anchored |
NC_007779 (Escherichia coli K-12) |
1e-77 |
94 |
|
predicted secretion pathway M-type protein, membrane anchored |
NC_000913 (Escherichia coli K12) |
1e-77 |
94 |
|
Putative general secretion pathway protein M-type yghD |
NC_017663 (Escherichia coli P12b) |
1e-77 |
94 |
|
general secretion pathway protein YghD |
NC_020163 (Escherichia coli APEC O78) |
6e-78 |
95 |
|
putative general secretion pathway protein YghD |
NC_011751 (Escherichia coli UMN026) |
8e-78 |
95 |
|
general secretion pathway protein YghD |
NC_018650 (Escherichia coli 2009EL-2050) |
2e-77 |
95 |
|
general secretion pathway protein YghD |
NC_018661 (Escherichia coli 2009EL-2071) |
2e-77 |
95 |
|
putative general secretion pathway protein YghD |
NC_018658 (Escherichia coli 2011C-3493) |
2e-77 |
95 |
|
general secretion pathway protein YghD |
NC_011748 (Escherichia coli 55989) |
2e-77 |
95 |
|
general secretion pathway protein YghD |
NC_009801 (Escherichia coli E24377A) |
2e-77 |
95 |
|
putative general secretion pathway protein YghD |
NC_011741 (Escherichia coli IAI1) |
2e-77 |
95 |
|
putative general secretion pathway protein YghD |
NC_010658 (Shigella boydii CDC 3083-94) |
4e-77 |
95 |
|
general secretion pathway protein YghD |
NC_007613 (Shigella boydii Sb227) |
4e-77 |
95 |
|
type II secretion system protein M |
NC_017633 (Escherichia coli ETEC H10407) |
8e-77 |
93 |
|
general secretion pathway protein |
NC_017641 (Escherichia coli UMNK88) |
8e-77 |
93 |
|
putative general secretion pathway protein YghD |
NC_010498 (Escherichia coli SMS-3-5) |
7e-76 |
94 |
|
putative general secretion pathway protein YghD |
NC_011415 (Escherichia coli SE11) |
9e-76 |
94 |
|
general secretion pathway protein M |
NC_016902 (Escherichia coli KO11FL) |
8e-75 |
94 |
|
putative general secretion pathway protein YghD |
NC_017660 (Escherichia coli KO11FL) |
8e-75 |
94 |
|
general secretion pathway protein |
NC_022364 (Escherichia coli LY180) |
8e-75 |
94 |
|
type II secretion system lipoprotein M |
NC_017635 (Escherichia coli W) |
8e-75 |
94 |
|
putative general secretion pathway protein YghD |
NC_017664 (Escherichia coli W) |
8e-75 |
94 |
|
putative type II secretion protein GspM |
NC_013364 (Escherichia coli 11128) |
1e-69 |
95 |
|
general secretion pathway protein GspM |
NC_017631 (Escherichia coli ABU 83972) |
7e-68 |
95 |
|
putative general secretion pathway protein YghD |
NC_017652 (Escherichia coli clone D i14) |
7e-68 |
95 |
|
putative general secretion pathway protein YghD |
NC_017651 (Escherichia coli clone D i2) |
7e-68 |
95 |
|
General secretion pathway protein M |
NC_017644 (Escherichia coli NA114) |
7e-68 |
95 |
|
general secretion pathway protein YghD |
NC_011740 (Escherichia fergusonii ATCC 35469) |
1e-67 |
92 |
|
secretion pathway protein |
NC_007606 (Shigella dysenteriae Sd197) |
6e-57 |
94 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='AJ617685' AND ph.id_pai_orf='77' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc