Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
type II restriction endonuclease |
NC_004917 (Helicobacter hepaticus ATCC 51449) |
1e-118 |
100 |
|
type II site-specific deoxyribonuclease |
NC_013422 (Halothiobacillus neapolitanus c2) |
3e-66 |
57 |
|
type II site-specific deoxyribonuclease |
NC_013502 (Rhodothermus marinus DSM 4252) |
1e-63 |
51 |
|
type II restriction endonuclease |
NC_017379 (Helicobacter pylori Puno135) |
5e-57 |
53 |
|
type II restriction endonuclease |
NC_017359 (Helicobacter pylori Sat464) |
5e-57 |
53 |
|
type II restriction endonuclease |
NC_010698 (Helicobacter pylori Shi470) |
5e-57 |
53 |
|
type II restriction endonuclease |
NC_017378 (Helicobacter pylori Puno120) |
6e-57 |
53 |
|
type II restriction endonuclease |
NC_017733 (Helicobacter pylori HUP-B14) |
2e-56 |
53 |
|
type II restriction endonuclease |
NC_017740 (Helicobacter pylori Shi169) |
2e-56 |
53 |
|
type II site-specific deoxyribonuclease |
NC_015945 (Muricauda ruestringensis DSM 13258) |
6e-55 |
54 |
|
restriction endonuclease EcoRV |
NC_009767 (Roseiflexus castenholzii DSM 13941) |
2e-50 |
49 |
|
type II restriction endonuclease like |
NC_010296 (Microcystis aeruginosa NIES-843) |
1e-45 |
41 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='NC_004917_P1' AND ph.id_pai_orf='7' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc