Homolog Viewer

PAthogenisity Island DataBase (PAI DB)

Home PAIs REIs Genomes Search Links

Homologs of hrpD6 gene of NC_003919_P1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) hrpD6
( NP_640753.1 )

HrpD6 protein

NC_003919
(Xanthomonas axonopodis 306)

1e-30

100

2) XAC29_02040
( YP_007634901.1 )

HrpD6 protein

NC_020800
(Xanthomonas axonopodis Xac29-1)

1e-30

100

3) hrpD6
( YP_007648823.1 )

HrpD6 protein

NC_020815
(Xanthomonas citri Aw12879)

1e-30

100

4) hrpD6
( YP_004849995.1 )

HrpD6 protein

NC_016010
(Xanthomonas axonopodis F1)

1e-25

5) hrpD6
( YP_198716.1 )

protein HrpD6

NC_006834
(Xanthomonas oryzae KACC10331)

2e-25

6) XOO_0099
( YP_449128.1 )

HrpD6 protein

NC_007705
(Xanthomonas oryzae MAFF 311018)

2e-25

7) hrpD6
( YP_001911270.1 )

protein HrpD6

NC_010717
(Xanthomonas oryzae PXO99A)

2e-25

8) hrpD6
( YP_005630684.1 )

type III secretion protein HrpD6

NC_017267
(Xanthomonas oryzae BLS256)

3e-25

9) hrpD6
( YP_362149.1 )

HrpD6 protein

NC_007508
(Xanthomonas campestris 85-10)

4e-25

10) hrpD6
( YP_005636491.1 )

type III secretion protein HrpD6

NC_017271
(Xanthomonas campestris 756C)

2e-24

11) XC_3020
( YP_244088.1 )

HrpD6 protein

NC_007086
(Xanthomonas campestris 8004)

2e-24

12) hrpD6
( NP_636596.1 )

HrpD6 protein

NC_003902
(Xanthomonas campestris ATCC 33913)

2e-24

13) hrpD6
( YP_001904488.1 )

HrpD6 protein

NC_010688
(Xanthomonas campestris B100)

2e-24

• Sequence Alignments

1) hrpD6 in NC_003919


> NC_003919_P1|7|G6|21241171|NP_640753.1|Xanthomonas_axonopodis_pv._citri_str._306|-|8726..8968|hrpD6|XAC0398|HrpD6 
protein
Length=80

 Score =  126 bits (461),  Expect = 1e-30, Method: Compositional matrix adjust.
 Identities = 80/80 (100%), Positives = 80/80 (100%), Gaps = 0/80 (0%)

Query  1   MFDAMTDTVTQDMSKILQTKAADPSGERLRNLEAALDATAQQIRVRWSAASDQTSRNDFN  60
           MFDAMTDTVTQDMSKILQTKAADPSGERLRNLEAALDATAQQIRVRWSAASDQTSRNDFN
Sbjct  1   MFDAMTDTVTQDMSKILQTKAADPSGERLRNLEAALDATAQQIRVRWSAASDQTSRNDFN  60

Query  61  AVHDGITAARNIVAHIAGMS  80
           AVHDGITAARNIVAHIAGMS
Sbjct  61  AVHDGITAARNIVAHIAGMS  80

2) XAC29_02040 in NC_020800


> NC_003919_P1|7|G6|21241171|NP_640753.1|Xanthomonas_axonopodis_pv._citri_str._306|-|8726..8968|hrpD6|XAC0398|HrpD6 
protein
Length=80

 Score =  126 bits (461),  Expect = 1e-30, Method: Compositional matrix adjust.
 Identities = 80/80 (100%), Positives = 80/80 (100%), Gaps = 0/80 (0%)

Query  1   MFDAMTDTVTQDMSKILQTKAADPSGERLRNLEAALDATAQQIRVRWSAASDQTSRNDFN  60
           MFDAMTDTVTQDMSKILQTKAADPSGERLRNLEAALDATAQQIRVRWSAASDQTSRNDFN
Sbjct  1   MFDAMTDTVTQDMSKILQTKAADPSGERLRNLEAALDATAQQIRVRWSAASDQTSRNDFN  60

Query  61  AVHDGITAARNIVAHIAGMS  80
           AVHDGITAARNIVAHIAGMS
Sbjct  61  AVHDGITAARNIVAHIAGMS  80

3) hrpD6 in NC_020815


> NC_003919_P1|7|G6|21241171|NP_640753.1|Xanthomonas_axonopodis_pv._citri_str._306|-|8726..8968|hrpD6|XAC0398|HrpD6 
protein
Length=80

 Score =  126 bits (461),  Expect = 1e-30, Method: Compositional matrix adjust.
 Identities = 80/80 (100%), Positives = 80/80 (100%), Gaps = 0/80 (0%)

Query  1   MFDAMTDTVTQDMSKILQTKAADPSGERLRNLEAALDATAQQIRVRWSAASDQTSRNDFN  60
           MFDAMTDTVTQDMSKILQTKAADPSGERLRNLEAALDATAQQIRVRWSAASDQTSRNDFN
Sbjct  1   MFDAMTDTVTQDMSKILQTKAADPSGERLRNLEAALDATAQQIRVRWSAASDQTSRNDFN  60

Query  61  AVHDGITAARNIVAHIAGMS  80
           AVHDGITAARNIVAHIAGMS
Sbjct  61  AVHDGITAARNIVAHIAGMS  80

4) hrpD6 in NC_016010


> NC_003919_P1|7|G6|21241171|NP_640753.1|Xanthomonas_axonopodis_pv._citri_str._306|-|8726..8968|hrpD6|XAC0398|HrpD6 
protein
Length=80

 Score =  110 bits (399),  Expect = 1e-25, Method: Compositional matrix adjust.
 Identities = 68/79 (87%), Positives = 75/79 (95%), Gaps = 0/79 (0%)

Query  1   MFDAMTDAVTQDMSKILQTKAMDLSGERLRNVETALDATAQQIRVHWSAASDQVARNDFN  60
           MFDAMTD+VTQDMSKILQTKA D SGERLRN+E+ALDATAQQIRV+WSAASDQ +RNDFN
Sbjct  1   MFDAMTDTVTQDMSKILQTKAADPSGERLRNLEAALDATAQQIRVRWSAASDQTSRNDFN  60

Query  61  TLYDGITAARNIVAHIAGM  79
           ++ DGITAARNIVAHIAGM
Sbjct  61  AVHDGITAARNIVAHIAGM  79

5) hrpD6 in NC_006834


> NC_003919_P1|7|G6|21241171|NP_640753.1|Xanthomonas_axonopodis_pv._citri_str._306|-|8726..8968|hrpD6|XAC0398|HrpD6 
protein
Length=80

 Score =  109 bits (395),  Expect = 2e-25, Method: Compositional matrix adjust.
 Identities = 66/79 (84%), Positives = 75/79 (95%), Gaps = 0/79 (0%)

Query  1   MFDAMTDAVTQDMSKILQTKAADLSGERLRNVDTALDATAQQIRGHWSAASDQAARSDFN  60
           MFDAMTD+VTQDMSKILQTKAAD SGERLRN+++ALDATAQQIR +WSAASDQ++R+DFN
Sbjct  1   MFDAMTDTVTQDMSKILQTKAADPSGERLRNLEAALDATAQQIRVRWSAASDQTSRNDFN  60

Query  61  VLHDGITAARNIVAHIANM  79
            +HDGITAARNIVAHIA M
Sbjct  61  AVHDGITAARNIVAHIAGM  79

6) XOO_0099 in NC_007705


> NC_003919_P1|7|G6|21241171|NP_640753.1|Xanthomonas_axonopodis_pv._citri_str._306|-|8726..8968|hrpD6|XAC0398|HrpD6 
protein
Length=80

 Score =  109 bits (395),  Expect = 2e-25, Method: Compositional matrix adjust.
 Identities = 66/79 (84%), Positives = 75/79 (95%), Gaps = 0/79 (0%)

Query  1   MFDAMTDAVTQDMSKILQTKAADLSGERLRNVDTALDATAQQIRGHWSAASDQAARSDFN  60
           MFDAMTD+VTQDMSKILQTKAAD SGERLRN+++ALDATAQQIR +WSAASDQ++R+DFN
Sbjct  1   MFDAMTDTVTQDMSKILQTKAADPSGERLRNLEAALDATAQQIRVRWSAASDQTSRNDFN  60

Query  61  VLHDGITAARNIVAHIANM  79
            +HDGITAARNIVAHIA M
Sbjct  61  AVHDGITAARNIVAHIAGM  79

7) hrpD6 in NC_010717


> NC_003919_P1|7|G6|21241171|NP_640753.1|Xanthomonas_axonopodis_pv._citri_str._306|-|8726..8968|hrpD6|XAC0398|HrpD6 
protein
Length=80

 Score =  109 bits (395),  Expect = 2e-25, Method: Compositional matrix adjust.
 Identities = 66/79 (84%), Positives = 75/79 (95%), Gaps = 0/79 (0%)

Query  1   MFDAMTDAVTQDMSKILQTKAADLSGERLRNVDTALDATAQQIRGHWSAASDQAARSDFN  60
           MFDAMTD+VTQDMSKILQTKAAD SGERLRN+++ALDATAQQIR +WSAASDQ++R+DFN
Sbjct  1   MFDAMTDTVTQDMSKILQTKAADPSGERLRNLEAALDATAQQIRVRWSAASDQTSRNDFN  60

Query  61  VLHDGITAARNIVAHIANM  79
            +HDGITAARNIVAHIA M
Sbjct  61  AVHDGITAARNIVAHIAGM  79

8) hrpD6 in NC_017267


> NC_003919_P1|7|G6|21241171|NP_640753.1|Xanthomonas_axonopodis_pv._citri_str._306|-|8726..8968|hrpD6|XAC0398|HrpD6 
protein
Length=80

 Score =  108 bits (393),  Expect = 3e-25, Method: Compositional matrix adjust.
 Identities = 66/79 (84%), Positives = 75/79 (95%), Gaps = 0/79 (0%)

Query  1   MFDAMTDAVTQDMSKILQTKAADLSGERLRNVEAALDATAQQIRGHWSAASDQAARSDFS  60
           MFDAMTD+VTQDMSKILQTKAAD SGERLRN+EAALDATAQQIR +WSAASDQ++R+DF+
Sbjct  1   MFDAMTDTVTQDMSKILQTKAADPSGERLRNLEAALDATAQQIRVRWSAASDQTSRNDFN  60

Query  61  VLHDGITAARNIVVHIASM  79
            +HDGITAARNIV HIA+M
Sbjct  61  AVHDGITAARNIVAHIAGM  79

9) hrpD6 in NC_007508


> NC_003919_P1|7|G6|21241171|NP_640753.1|Xanthomonas_axonopodis_pv._citri_str._306|-|8726..8968|hrpD6|XAC0398|HrpD6 
protein
Length=80

 Score =  108 bits (391),  Expect = 4e-25, Method: Compositional matrix adjust.
 Identities = 66/80 (83%), Positives = 75/80 (94%), Gaps = 0/80 (0%)

Query  6   MFDAMTDAVTQDMSKILQAKAMDLSGERLRNVETALDATAQQIRVHWSAASDQVARNDFN  65
           MFDAMTD+VTQDMSKILQ+KA D SGERLRN+E+ALDATAQQIRV+WSAASDQ +RNDFN
Sbjct  1   MFDAMTDTVTQDMSKILQTKAADPSGERLRNLEAALDATAQQIRVRWSAASDQTSRNDFN  60

Query  66  VLYDGITAARNIVAHIASMP  85
            + DGITAARNIVAHIA+M+
Sbjct  61  AVHDGITAARNIVAHIAGMS  80

10) XC_3020 in NC_007086


> NC_003919_P1|7|G6|21241171|NP_640753.1|Xanthomonas_axonopodis_pv._citri_str._306|-|8726..8968|hrpD6|XAC0398|HrpD6 
protein
Length=80

 Score =  105 bits (382),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 63/80 (79%), Positives = 75/80 (94%), Gaps = 0/80 (0%)

Query  1   MFDAMTDTLTQDMSKILQTKAQDLSGERLRNIEAALHATAQQLRVHWSAASDQAARNDFI  60
           MFDAMTDT+TQDMSKILQTKA D SGERLRN+EAAL+ATAQQ+RV+WSAASDQ++RNDF 
Sbjct  1   MFDAMTDTVTQDMSKILQTKAADPSGERLRNLEAALDATAQQIRVRWSAASDQTSRNDFN  60

Query  61  VLHDGINAAQDIVAHIASMP  80
            +HDGI AA++IVAHIA+M+
Sbjct  61  AVHDGITAARNIVAHIAGMS  80

11) hrpD6 in NC_003902


> NC_003919_P1|7|G6|21241171|NP_640753.1|Xanthomonas_axonopodis_pv._citri_str._306|-|8726..8968|hrpD6|XAC0398|HrpD6 
protein
Length=80

 Score =  105 bits (382),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 63/80 (79%), Positives = 75/80 (94%), Gaps = 0/80 (0%)

Query  1   MFDAMTDTLTQDMSKILQTKAQDLSGERLRNIEAALHATAQQLRVHWSAASDQAARNDFI  60
           MFDAMTDT+TQDMSKILQTKA D SGERLRN+EAAL+ATAQQ+RV+WSAASDQ++RNDF 
Sbjct  1   MFDAMTDTVTQDMSKILQTKAADPSGERLRNLEAALDATAQQIRVRWSAASDQTSRNDFN  60

Query  61  VLHDGINAAQDIVAHIASMP  80
            +HDGI AA++IVAHIA+M+
Sbjct  61  AVHDGITAARNIVAHIAGMS  80

12) hrpD6 in NC_017271


> NC_003919_P1|7|G6|21241171|NP_640753.1|Xanthomonas_axonopodis_pv._citri_str._306|-|8726..8968|hrpD6|XAC0398|HrpD6 
protein
Length=80

 Score =  105 bits (382),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 63/80 (79%), Positives = 75/80 (94%), Gaps = 0/80 (0%)

Query  1   MFDAMTDTLTQDMSKILQTKAQDLSGERLRNIEAALHATAQQLRVHWSAASDQAARNDFI  60
           MFDAMTDT+TQDMSKILQTKA D SGERLRN+EAAL+ATAQQ+RV+WSAASDQ++RNDF 
Sbjct  1   MFDAMTDTVTQDMSKILQTKAADPSGERLRNLEAALDATAQQIRVRWSAASDQTSRNDFN  60

Query  61  VLHDGINAAQDIVAHIASMP  80
            +HDGI AA++IVAHIA+M+
Sbjct  61  AVHDGITAARNIVAHIAGMS  80

13) hrpD6 in NC_010688


> NC_003919_P1|7|G6|21241171|NP_640753.1|Xanthomonas_axonopodis_pv._citri_str._306|-|8726..8968|hrpD6|XAC0398|HrpD6 
protein
Length=80

 Score =  105 bits (382),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 63/80 (79%), Positives = 75/80 (94%), Gaps = 0/80 (0%)

Query  1   MFDAMTDTLTQDMSKILQTKAQDLSGERLRNIEAALHATAQQLRVHWSAASDQAARNDFI  60
           MFDAMTDT+TQDMSKILQTKA D SGERLRN+EAAL+ATAQQ+RV+WSAASDQ++RNDF 
Sbjct  1   MFDAMTDTVTQDMSKILQTKAADPSGERLRNLEAALDATAQQIRVRWSAASDQTSRNDFN  60

Query  61  VLHDGINAAQDIVAHIASMP  80
            +HDGI AA++IVAHIA+M+
Sbjct  61  AVHDGITAARNIVAHIAGMS  80