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Homologs of tnpR gene of EU780013

DNA-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) SNSL254_pSN254_0142
( - )

NC_009140
(Salmonella enterica SL254)

0.0

100

2) Alide2_1954
( - )

NC_015422
(Alicycliphilus denitrificans K601)

e-234

93.4

• Sequence Alignments

1) SNSL254_pSN254_0142 in NC_009140


>EU780013|7|G3|192822645|ACF06154.1|Klebsiella_pneumoniae_12836|-|6495..7112|tnpR|-|resolvase 
          Length = 618

 Score = 1220 bits (3149), Expect = 0.0
 Identities = 618/618 (100%)
 Strand = Plus / Plus

Query: 1   ttgacatattccgtcaaaggtaatagatttcatcctgacacttttgcctttggaggcatc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ttgacatattccgtcaaaggtaatagatttcatcctgacacttttgcctttggaggcatc 60

Query: 61  ttgcaaggtcaacgcatcggctatgtccgcgtcagcagcttcgaccagaacccggaacgg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ttgcaaggtcaacgcatcggctatgtccgcgtcagcagcttcgaccagaacccggaacgg 120

Query: 121 caattggagggtgttcaggtggcgcgggtgttcaccgacaaggcttctggcaaggacacc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 caattggagggtgttcaggtggcgcgggtgttcaccgacaaggcttctggcaaggacacc 180

Query: 181 cagcgtcccgagctggaaaggctgctggccttcgtccgcgagggcgacaccgtggtggtg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cagcgtcccgagctggaaaggctgctggccttcgtccgcgagggcgacaccgtggtggtg 240

Query: 241 catagcatggacaggctggcacgcaaccttgatgacctgcgccgcatcgtccaagggctg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 catagcatggacaggctggcacgcaaccttgatgacctgcgccgcatcgtccaagggctg 300

Query: 301 acacaacggggcgtgcgcatggagttcgtcaaagaagggctgaagttcaccggcgaggac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 acacaacggggcgtgcgcatggagttcgtcaaagaagggctgaagttcaccggcgaggac 360

Query: 361 tcaccgatggccaatctgatgctgtcggtcatgggagccttcgctgagttcgagcgcgcc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tcaccgatggccaatctgatgctgtcggtcatgggagccttcgctgagttcgagcgcgcc 420

Query: 421 ctgatccgcgaacgtcagcgcgagggaatcgtgctggccaagcagcgcggtgcctaccgg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ctgatccgcgaacgtcagcgcgagggaatcgtgctggccaagcagcgcggtgcctaccgg 480

Query: 481 ggacgaaagaaatcgctgaacagcgaacaaattgccgagttgaaacggcgagttgcggca 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ggacgaaagaaatcgctgaacagcgaacaaattgccgagttgaaacggcgagttgcggca 540

Query: 541 ggcgaccaaaaaaccttggtggcccgtgacttcggcatcagccgcgaaaccttgtaccag 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ggcgaccaaaaaaccttggtggcccgtgacttcggcatcagccgcgaaaccttgtaccag 600

Query: 601 tacctgcgggaagactga 618
           ||||||||||||||||||
Sbjct: 601 tacctgcgggaagactga 618

2) Alide2_1954 in NC_015422


>EU780013|7|G3|192822645|ACF06154.1|Klebsiella_pneumoniae_12836|-|6495..7112|tnpR|-|resolvase 
          Length = 618

 Score = 806 bits (2079), Expect = e-234
 Identities = 425/455 (93%)
 Strand = Plus / Plus

Query: 8   cttcaggcaaggacacacaacgtcccgaacttgaaaggctgctggcctttgtgcgcgagg 67
           |||| ||||||||||| || |||||||| || ||||||||||||||||| || |||||||
Sbjct: 164 cttctggcaaggacacccagcgtcccgagctggaaaggctgctggccttcgtccgcgagg 223

Query: 68  gcgacaccgtggtggtgcacagcatggacaggttggcacgcaatctcgatgacctgcgcc 127
           ||||||||||||||||||| |||||||||||| |||||||||| || |||||||||||||
Sbjct: 224 gcgacaccgtggtggtgcatagcatggacaggctggcacgcaaccttgatgacctgcgcc 283

Query: 128 gcatcgttcaggggctgacacaacggggcgtgcggatggagtttgtcaaagaagggctgg 187
           ||||||| || ||||||||||||||||||||||| |||||||| ||||||||||||||| 
Sbjct: 284 gcatcgtccaagggctgacacaacggggcgtgcgcatggagttcgtcaaagaagggctga 343

Query: 188 cgttcaccggcgatgactcaccgatggccaatttgatgctgtcggtcatgggggcttttg 247
            |||||||||||| |||||||||||||||||| ||||||||||||||||||| || || |
Sbjct: 344 agttcaccggcgaggactcaccgatggccaatctgatgctgtcggtcatgggagccttcg 403

Query: 248 cggagttcgagcgcgcactgatccgcgaacgccagcgcgagggaatcgtgctggccaagc 307
           | |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 404 ctgagttcgagcgcgccctgatccgcgaacgtcagcgcgagggaatcgtgctggccaagc 463

Query: 308 agcgcggtgcctaccggggacgaaagaaatcgctgaacagcgaacaaattgccaagttga 367
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 464 agcgcggtgcctaccggggacgaaagaaatcgctgaacagcgaacaaattgccgagttga 523

Query: 368 aacagcgagtcgcggcaggcgatcaaaaaaccttggtggcccgtgacttcggcatcagtc 427
           ||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 524 aacggcgagttgcggcaggcgaccaaaaaaccttggtggcccgtgacttcggcatcagcc 583

Query: 428 gcgaaaccttgtaccagtacctgcgggaagactga 462
           |||||||||||||||||||||||||||||||||||
Sbjct: 584 gcgaaaccttgtaccagtacctgcgggaagactga 618