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Homologs of hrpJ gene of EF514224

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) Psyr_1216
( YP_234308.1 )

type III secretion protein HrpJ

NC_007005
(Pseudomonas syringae B728a)

2e-157

2) hrpJ
( YP_273552.1 )

type III secretion component protein HrcJ

NC_005773
(Pseudomonas syringae 1448A)

5e-157

3) hrpJ
( NP_791230.1 )

type III secretion protein HrpJ

NC_004578
(Pseudomonas syringae DC3000)

1e-132

4) Pmen_0038
( YP_001185544.1 )

TyeA family type III secretion effector delivery regulator

NC_009439
(Pseudomonas mendocina ymp)

2e-57

• Sequence Alignments

1) Psyr_1216 in NC_007005


> EF514224|7|G5|148562532|ABQ88351.1|Pseudomonas_syringae_pv._syringae_61|+|5626..6732|hrpJ|-|HrpJ
Length=368

 Score =  548 bits (2069),  Expect = 2e-157, Method: Compositional matrix adjust.
 Identities = 359/368 (98%), Positives = 365/368 (99%), Gaps = 0/368 (0%)

Query  26   MKIVAPPTLpirpvapiraitpaaraipGGGLPDEKGTSSLQVSRFAAALVQHSRILRER  85
            MKIVAPPTLPIRPVAPIRAITPAARAIPG+GLPDEKGTSSLQVSRFAAALVQHSRILRER
Sbjct  1    MKIVAPPTLPIRPVAPIRAITPAARAIPGSGLPDEKGTSSLQVSRFAAALVQHSRILRER  60

Query  86   ELIASRNALQSRAVKLGELYQLLMSASDTGLDNAARLLRKKLLQDNDADLEQVLEFADGD  145
            ELIASRNALQSRAVKLGELYQLLMS+SDTGLDNAARLLRKKLLQDNDADLEQVLEFADGD
Sbjct  61   ELIASRNALQSRAVKLGELYQLLMSTSDTGLDNAARLLRKKLLQDNDADLEQVLEFADGD  120

Query  146  AAKAHVVLQAARKQAEDDGAEAEYVALTQTLKHLRRQFGPRTRAGINTARAFGRQNIDNK  205
            AAKAHVVLQAARKQAEDDGAE EY ALTQTLKHLRR+FGPR+RAGINTARAFGRQNIDNK
Sbjct  121  AAKAHVVLQAARKQAEDDGAEEEYAALTQTLKHLRRRFGPRARAGINTARAFGRQNIDNK  180

Query  206  RRTALRNLYGVAVSGQPNVTGLIEALIGEQQEPGEFDLNLRDMRIAIADDLSAITPSASH  265
            RRTALRNLYGVAVSGQPNVTGLIEALIGEQQEPGEFDLNLRDMR AIADDLSAITPSASH
Sbjct  181  RRTALRNLYGVAVSGQPNVTGLIEALIGEQQEPGEFDLNLRDMRRAIADDLSAITPSASH  240

Query  266  EQLRTLMHGLTTARHVTTLLRGCEHLLGRMRKKNPKLTVDPPAFLKHMLTLTANGMNVNQ  325
            EQLRTLMHGLTTARHVTTLLRGCEHLLGRMRKKNPKLTVDPPAFLKHMLTLTANGMNVNQ
Sbjct  241  EQLRTLMHGLTTARHVTTLLRGCEHLLGRMRKKNPKLTVDPPAFLKHMLTLTANGMNVNQ  300

Query  326  TLQLTQHIGGNRLEHQLAFLNGLRPMLMQLPILLWRDLKSRQAALNNLLTLMAELTQKEQ  385
            TLQLTQHIGGN+LEHQLAFLNGLRPMLMQLPILLWRDLKSRQAALNNLLTLMAELT+KEQ
Sbjct  301  TLQLTQHIGGNKLEHQLAFLNGLRPMLMQLPILLWRDLKSRQAALNNLLTLMAELTHKEQ  360

Query  386  KQLYEGLA  393
            KQLYEGLA
Sbjct  361  KQLYEGLA  368

2) hrpJ in NC_005773


> EF514224|7|G5|148562532|ABQ88351.1|Pseudomonas_syringae_pv._syringae_61|+|5626..6732|hrpJ|-|HrpJ
Length=368

 Score =  546 bits (2062),  Expect = 5e-157, Method: Compositional matrix adjust.
 Identities = 325/368 (89%), Positives = 354/368 (97%), Gaps = 1/368 (0%)

Query  1    MKIVAPPILPTHTVTPIRAVTPAARAIPGT-LSSEKGTSSQQVSRFAAALVRNSRILRQR  59
            MKIVAPP LP + V+PIRA+TPAARAIPG+ L+ EKGTSS QVSRFAAALV++SRILR+R
Sbjct  1    MKIVAPPTLPIRPVAPIRAITPAARAIPGSGLPDEKGTSSLQVSRFAAALVQHSRILRER  60

Query  60   ELIASRNALQSRAVKLGELYQLLMSANDTGLDNAARLLRKKLLQENDTELEQVLEFADGD  119
            ELIASRNALQSRAVKLGELYQLLMS++DTGLDNAARLLRKKLLQ+ND++LEQVLEFADGD
Sbjct  61   ELIASRNALQSRAVKLGELYQLLMSTSDTGLDNAARLLRKKLLQDNDADLEQVLEFADGD  120

Query  120  AAKAHVVLQAARKQAEEDGAEGEYVALTQTLKQLRRKFGPHARAGINTARAFGRQNVDNK  179
            AAKAHVVLQAARKQAE+DGAE EY ALTQTLK+LRR+FGP+ARAGINTARAFGRQN+DNK
Sbjct  121  AAKAHVVLQAARKQAEDDGAEEEYAALTQTLKHLRRRFGPRARAGINTARAFGRQNIDNK  180

Query  180  RRTALRNLYGVAVSGQPNVTGLIEALINEQEETGDFDLNLRDMRRAIADDLSAITPSASH  239
            RRTALRNLYGVAVSGQPNVTGLIEALI EQ+E G+FDLNLRDMRRAIADDLSAITPSASH
Sbjct  181  RRTALRNLYGVAVSGQPNVTGLIEALIGEQQEPGEFDLNLRDMRRAIADDLSAITPSASH  240

Query  240  EQLRTLMHGLTTARHVTTLLRGCEHLLGRMRNKNPDLKVDPPAFLKHLLTLTANGMNVNQ  299
            EQLRTLMHGLTTARHVTTLLRGCEHLLGRMR+KNP L VDPPAFLKH+LTLTANGMNVNQ
Sbjct  241  EQLRTLMHGLTTARHVTTLLRGCEHLLGRMRKKNPKLTVDPPAFLKHMLTLTANGMNVNQ  300

Query  300  TLQLTQHIGGARLKNQLAFLNGLRPMLMQLPILLWKDMKSRQAALNNLLTLMAELTQQEQ  359
            TLQLTQHIGG +L +QLAFLNGLRPMLMQLPILLW+D+KSRQAALNNLLTLMAELT++EQ
Sbjct  301  TLQLTQHIGGNKLEHQLAFLNGLRPMLMQLPILLWRDLKSRQAALNNLLTLMAELTHKEQ  360

Query  360  KQLFEGLA  367
            KQL+EGLA
Sbjct  361  KQLYEGLA  368

3) hrpJ in NC_004578


> EF514224|7|G5|148562532|ABQ88351.1|Pseudomonas_syringae_pv._syringae_61|+|5626..6732|hrpJ|-|HrpJ
Length=368

 Score =  465 bits (1754),  Expect = 1e-132, Method: Compositional matrix adjust.
 Identities = 288/369 (79%), Positives = 334/369 (91%), Gaps = 2/369 (0%)

Query  1    MKIVAPPIMRILPVAPTRVVTPAAQPLPNADL-HNSGTSPQQVSRFAAALIQHRRILIQR  59
            MKIVAPP + I PVAP R +TPAA+++P ++L ++ GTS+ QVSRFAAAL+QH RIL +R
Sbjct  1    MKIVAPPTLPIRPVAPIRAITPAARAIPGSGLPDEKGTSSLQVSRFAAALVQHSRILRER  60

Query  60   DLIASNNALQSRAVKLGELYQLLMTDQDTGLDNAARVLRKKLMQDDSSSDLKQVLDYTDG  119
            +LIAS NALQSRAVKLGELYQLLM+  DTGLDNAAR+LRKKL+QD+ + DL QVL+++DG
Sbjct  61   ELIASRNALQSRAVKLGELYQLLMSTSDTGLDNAARLLRKKLLQDNDA-DLEQVLEFADG  119

Query  120  DAAKAHVVLQAARKQAEADGEMGEHVVLTQQLKQLRRKYGPRARAGINSAKAFARPNIDN  179
            DAAKAHVVLQAARKQAE DG   E   LTQ LK+LRR++GPRARAGIN+A+AF+R NIDN
Sbjct  120  DAAKAHVVLQAARKQAEDDGAEEEYAALTQTLKHLRRRFGPRARAGINTARAFGRQNIDN  179

Query  180  KRRVALRNLYSVAVSGQPNITGLIEALLGEQQEAGQFNIDLRDMRTAIADDLSAMTPSAS  239
            KRR ALRNLY+VAVSGQPN+TGLIEAL+GEQQE+G+F+++LRDMR AIADDLSA+TPSAS
Sbjct  180  KRRTALRNLYGVAVSGQPNVTGLIEALIGEQQEPGEFDLNLRDMRRAIADDLSAITPSAS  239

Query  240  HEQLRTLMHGLNTARHVTTLLKGCEHLLGRMRNKNPDLTVDPPAFLKHLLTLTANGMNVN  299
            HEQLRTLMHGL TARHVTTLL+GCEHLLGRMR+KNP LTVDPPAFLKH+LTLTANGMNVN
Sbjct  240  HEQLRTLMHGLTTARHVTTLLRGCEHLLGRMRKKNPKLTVDPPAFLKHMLTLTANGMNVN  299

Query  300  QTLQLTQHIGGKQLKHQLAFLNGlrpmllqlpillWRDMKSRQTALSNLLILMAELTTQE  359
            QTLQLTQHIGG++L HQLAFLNGLRPML+QLPILLWRD+KSRQ+AL+NLL LMAELT +E
Sbjct  300  QTLQLTQHIGGNKLEHQLAFLNGLRPMLMQLPILLWRDLKSRQAALNNLLTLMAELTHKE  359

Query  360  QKQLYGGLV  368
            QKQLY GL 
Sbjct  360  QKQLYEGLA  368

4) Pmen_0038 in NC_009439


> EF514224|7|G5|148562532|ABQ88351.1|Pseudomonas_syringae_pv._syringae_61|+|5626..6732|hrpJ|-|HrpJ
Length=368

 Score =  215 bits (802),  Expect = 2e-57, Method: Compositional matrix adjust.
 Identities = 174/339 (52%), Positives = 249/339 (74%), Gaps = 15/339 (4%)

Query  47   KFAAALVQNSRELGRRDLFAKINALQSQASKQhelahlllatheRGMEESARALRKTLKN  106
            +FAAALVQ+SR L  R+L+A  NALQS+A K  EL +LL++T + G++++AR LRK L +
Sbjct  45   RFAAALVQHSRILRERELIASRNALQSRAVKLGELYQLLMSTSDTGLDNAARLLRKKLLQ  104

Query  107  GQLLRMERGKLLKQIVDSMagdaakahallqaaarqakgEKSlneqqalnqqlqllrqqH  166
                  + +  L Q+++   GDAAKAH +LQAA +QA ++ + +E  AL Q L+ LR++ 
Sbjct  105  ------DNDADLEQVLEFADGDAAKAHVVLQAARKQAEDDGAEEEYAALTQTLKHLRRRF  158

Query  167  GRNPRPLFNTGNNTRILARGGEDPQRRDKLRSLYSVAVTEQLNVVGLIEALLNSTQDDGQ  226
            G  +R+ +NT   +R ++R   D +RR  LR+LY+VAV+ Q NV GLIEAL+   Q+ G+
Sbjct  159  GPRARAGINT---ARAFGRQNIDNKRRTALRNLYGVAVSGQPNVTGLIEALIGEQQEPGE  215

Query  227  KDGREGFEAVLREIRQVVARDMAELDGSASPQKLRTMMYAMSTAQYVATLFGGCEHLLGR  286
                  F+  LR++R+ +A D++ +  SAS ++LRT+M +++TA+ V+TL+ GCEHLLGR
Sbjct  216  ------FDLNLRDMRRAIADDLSAITPSASHEQLRTLMHGLTTARHVTTLLRGCEHLLGR  269

Query  287  MRNKNPAMQVETSAFLKNLLGLIGKGMALNDTLQLTQQIGGRQLKHQLAFLNGLRPMLHQ  346
            MR+KNP + V+ +AFLK++L L ++GM +N+TLQLTQ+IGG +L HQLAFLNGLRPML Q
Sbjct  270  MRKKNPKLTVDPPAFLKHMLTLTANGMNVNQTLQLTQHIGGNKLEHQLAFLNGLRPMLMQ  329

Query  347  LPIMLWRDIKSRQNALGNLLSLMAALTSEEQKRLKEGIA  385
            LPI+LWRD+KSRQ AL NLL+LMA LT  EQK+L EG+A
Sbjct  330  LPILLWRDLKSRQAALNNLLTLMAELTHKEQKQLYEGLA  368