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Homologs of cag13 gene of AY330637

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) HPSNT_02745
( YP_005786689.1 )

CAG pathogenicity island protein S

NC_017376
(Helicobacter pylori Santal49)

9e-89

2) cagS
( YP_005779057.1 )

cag pathogenicity island protein

NC_017368
(Helicobacter pylori F16)

2e-88

3) K747_06730
( YP_007979533.1 )

cag pathogenicity island protein

NC_021215
(Helicobacter pylori UM032)

2e-88

4) K748_07975
( YP_008337449.1 )

cag pathogenicity island protein

NC_021882
(Helicobacter pylori UM298)

2e-88

5) K749_01365
( YP_007980070.1 )

cag pathogenicity island protein

NC_021216
(Helicobacter pylori UM299)

2e-88

6) HMPREF4655_21071
( YP_005770158.1 )

CAG pathogenicity island protein 13

NC_017360
(Helicobacter pylori 35A)

3e-88

7) cagS
( YP_005774536.1 )

cag pathogenicity island protein

NC_017365
(Helicobacter pylori F30)

3e-88

8) HPELS_04005
( YP_005424921.1 )

CAG pathogenicity island protein S

NC_017063
(Helicobacter pylori ELS37)

4e-88

9) HPLT_02645
( YP_005772672.1 )

CAG pathogenicity island protein 13

NC_017362
(Helicobacter pylori Lithuania75)

5e-88

10) K751_03290
( YP_007983638.1 )

cag pathogenicity island protein

NC_021218
(Helicobacter pylori UM066)

6e-88

11) HMPREF0462_0886
( YP_005785453.1 )

CAG pathogenicity island protein 13

NC_017375
(Helicobacter pylori 83)

6e-88

12) cagS
( YP_002301174.1 )

cag pathogenicity island protein S

NC_011498
(Helicobacter pylori P12)

1e-87

13) cagS
( YP_002266120.1 )

cag pathogenicity island protein S

NC_011333
(Helicobacter pylori G27)

9e-88

14) HPIN_04225
( YP_005782156.1 )

CAG pathogenicity island protein 13

NC_017372
(Helicobacter pylori India7)

1e-87

15) HP0534
( NP_207330.1 )

cag pathogenicity island protein (cag13)

NC_000915
(Helicobacter pylori 26695)

2e-87

16) C694_02755
( YP_006934457.1 )

cag pathogenicity island protein S

NC_018939
(Helicobacter pylori 26695)

2e-87

17) cagS
( YP_007536667.1 )

cag pathogenicity island protein

NC_020508
(Helicobacter pylori OK113)

2e-87

18) C695_02755
( YP_006893022.1 )

cag pathogenicity island protein S

NC_018937
(Helicobacter pylori Rif1)

2e-87

19) C730_02755
( YP_006936063.1 )

cag pathogenicity island protein S

NC_018938
(Helicobacter pylori Rif2)

2e-87

20) HPKB_0809
( YP_005762317.1 )

cag pathogenicity island protein S

NC_017354
(Helicobacter pylori 52)

2e-87

21) HPPN135_02615
( YP_005789740.1 )

CAG pathogenicity island protein S

NC_017379
(Helicobacter pylori Puno135)

3e-87

22) cagS
( YP_005775736.1 )

cag pathogenicity island protein

NC_017366
(Helicobacter pylori F32)

3e-87

23) cagS
( YP_005777277.1 )

cag pathogenicity island protein

NC_017367
(Helicobacter pylori F57)

3e-87

24) HPAG1_0510
( YP_627251.1 )

cag pathogenicity island protein S

NC_008086
(Helicobacter pylori HPAG1)

3e-87

25) HPSH169_02730
( YP_006225738.1 )

CAG pathogenicity island protein S

NC_017740
(Helicobacter pylori Shi169)

3e-87

26) HPSH417_02545
( YP_006224156.1 )

CAG pathogenicity island protein S

NC_017739
(Helicobacter pylori Shi417)

3e-87

27) HPSH_04255
( YP_001910316.1 )

cag pathogenicity island protein CagS

NC_010698
(Helicobacter pylori Shi470)

3e-87

28) cagS
( YP_003728731.1 )

cag pathogenicity island protein S

NC_014256
(Helicobacter pylori B8)

4e-87

29) HPSAT_04110
( YP_005768466.1 )

CAG pathogenicity island protein 13

NC_017359
(Helicobacter pylori Sat464)

1e-86

30) cagS
( NP_223200.1 )

cag island protein

NC_000921
(Helicobacter pylori J99)

6e-87

31) cagS
( YP_007538430.1 )

cag pathogenicity island protein

NC_020509
(Helicobacter pylori OK310)

9e-87

32) cagS
( YP_005793178.1 )

cag pathogenicity island protein S

NC_017382
(Helicobacter pylori 51)

1e-86

33) HPCU_02915
( YP_005766657.1 )

CAG pathogenicity island protein 13

NC_017358
(Helicobacter pylori Cuz20)

1e-86

34) K750_04105
( YP_007982177.1 )

cag pathogenicity island protein

NC_021217
(Helicobacter pylori UM037)

1e-86

35) HPSH112_04380
( YP_006227570.1 )

CAG pathogenicity island protein S

NC_017741
(Helicobacter pylori Shi112)

2e-86

36) HPB14_04110
( YP_006219535.1 )

CAG pathogenicity island protein S

NC_017733
(Helicobacter pylori HUP-B14)

2e-86

37) HPPC_02630
( YP_003926814.1 )

CAG pathogenicity island protein 13

NC_014555
(Helicobacter pylori PeCan4)

3e-86

38) HPPN120_02595
( YP_005788195.1 )

CAG pathogenicity island protein S

NC_017378
(Helicobacter pylori Puno120)

4e-86

39) hp2017_0515
( YP_005783504.1 )

cag pathogenicity island protein

NC_017374
(Helicobacter pylori 2017)

3e-85

40) hp2018_0517
( YP_005791348.1 )

cag pathogenicity island protein

NC_017381
(Helicobacter pylori 2018)

3e-85

41) cag13
( YP_005765040.1 )

cag pathogenicity island protein

NC_017357
(Helicobacter pylori 908)

3e-85

42) HPSJM_02620
( YP_003928437.1 )

CAG pathogenicity island protein 13

NC_014560
(Helicobacter pylori SJM180)

3e-85

43) HPPC18_02555
( YP_006228777.1 )

CAG pathogenicity island protein S

NC_017742
(Helicobacter pylori PeCan18)

4e-85

44) cagS
( YP_006338481.1 )

cag pathogenicity island protein S

NC_017926
(Helicobacter pylori XZ274)

7e-84

45) HPGAM_02725
( YP_005780268.1 )

CAG pathogenicity island protein S

NC_017371
(Helicobacter pylori Gambia94/24)

4e-83

46) HPV225_0528
( YP_005763461.1 )

cag pathogenicity island protein

NC_017355
(Helicobacter pylori v225d)

1e-68

• Sequence Alignments

1) HPSNT_02745 in NC_017376


> AY330637|7|G7|37811793|AAR03868.1|Helicobacter_pylori_Ca52|-|8116..8715|cag13|HP0534|Cag13
Length=199

 Score =  318 bits (1194),  Expect = 9e-89, Method: Compositional matrix adjust.
 Identities = 198/199 (99%), Positives = 199/199 (100%), Gaps = 0/199 (0%)

Query  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60
            MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA
Sbjct  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60

Query  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAIAENPNFLFSKFDRSILGI  120
            LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAI+ENPNFLFSKFDRSILGI
Sbjct  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAITENPNFLFSKFDRSILGI  120

Query  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEMNFYANLKTIEQYNDYVRD  180
            FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEMNFYANLKTIEQYNDYVRD
Sbjct  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEMNFYANLKTIEQYNDYVRD  180

Query  181  LLMKFDLEKYMKEKGVQNA  199
            LLMKFDLEKYMKEKGVQNA
Sbjct  181  LLMKFDLEKYMKEKGVQNA  199

2) cagS in NC_017368


> AY330637|7|G7|37811793|AAR03868.1|Helicobacter_pylori_Ca52|-|8116..8715|cag13|HP0534|Cag13
Length=199

 Score =  317 bits (1190),  Expect = 2e-88, Method: Compositional matrix adjust.
 Identities = 198/199 (99%), Positives = 199/199 (100%), Gaps = 0/199 (0%)

Query  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60
            MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA
Sbjct  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60

Query  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAITENPNFLFSKFDRSILGI  120
            LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAITENPNFLFSKFDRSILGI
Sbjct  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAITENPNFLFSKFDRSILGI  120

Query  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEVNFYANLKTIEQYNDYVRD  180
            FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEE+NFYANLKTIEQYNDYVRD
Sbjct  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEMNFYANLKTIEQYNDYVRD  180

Query  181  LLMKFDLEKYMKEKGVQNA  199
            LLMKFDLEKYMKEKGVQNA
Sbjct  181  LLMKFDLEKYMKEKGVQNA  199

3) K747_06730 in NC_021215


> AY330637|7|G7|37811793|AAR03868.1|Helicobacter_pylori_Ca52|-|8116..8715|cag13|HP0534|Cag13
Length=199

 Score =  317 bits (1189),  Expect = 2e-88, Method: Compositional matrix adjust.
 Identities = 197/199 (99%), Positives = 199/199 (100%), Gaps = 0/199 (0%)

Query  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60
            MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA
Sbjct  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60

Query  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAIAENPNFLFSKFDRSILGI  120
            LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAI+ENPNFLFSKFDRSILGI
Sbjct  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAITENPNFLFSKFDRSILGI  120

Query  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEVNFYANLKTIEQYNDYVRD  180
            FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEE+NFYANLKTIEQYNDYVRD
Sbjct  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEMNFYANLKTIEQYNDYVRD  180

Query  181  LLMKFDLEKYMKEKGVQNA  199
            LLMKFDLEKYMKEKGVQNA
Sbjct  181  LLMKFDLEKYMKEKGVQNA  199

4) K748_07975 in NC_021882


> AY330637|7|G7|37811793|AAR03868.1|Helicobacter_pylori_Ca52|-|8116..8715|cag13|HP0534|Cag13
Length=199

 Score =  317 bits (1189),  Expect = 2e-88, Method: Compositional matrix adjust.
 Identities = 197/199 (99%), Positives = 199/199 (100%), Gaps = 0/199 (0%)

Query  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60
            MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA
Sbjct  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60

Query  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAIAENPNFLFSKFDRSILGI  120
            LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAI+ENPNFLFSKFDRSILGI
Sbjct  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAITENPNFLFSKFDRSILGI  120

Query  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEVNFYANLKTIEQYNDYVRD  180
            FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEE+NFYANLKTIEQYNDYVRD
Sbjct  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEMNFYANLKTIEQYNDYVRD  180

Query  181  LLMKFDLEKYMKEKGVQNA  199
            LLMKFDLEKYMKEKGVQNA
Sbjct  181  LLMKFDLEKYMKEKGVQNA  199

5) K749_01365 in NC_021216


> AY330637|7|G7|37811793|AAR03868.1|Helicobacter_pylori_Ca52|-|8116..8715|cag13|HP0534|Cag13
Length=199

 Score =  317 bits (1189),  Expect = 2e-88, Method: Compositional matrix adjust.
 Identities = 197/199 (99%), Positives = 199/199 (100%), Gaps = 0/199 (0%)

Query  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60
            MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA
Sbjct  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60

Query  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAIAENPNFLFSKFDRSILGI  120
            LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAI+ENPNFLFSKFDRSILGI
Sbjct  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAITENPNFLFSKFDRSILGI  120

Query  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEVNFYANLKTIEQYNDYVRD  180
            FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEE+NFYANLKTIEQYNDYVRD
Sbjct  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEMNFYANLKTIEQYNDYVRD  180

Query  181  LLMKFDLEKYMKEKGVQNA  199
            LLMKFDLEKYMKEKGVQNA
Sbjct  181  LLMKFDLEKYMKEKGVQNA  199

6) HMPREF4655_21071 in NC_017360


> AY330637|7|G7|37811793|AAR03868.1|Helicobacter_pylori_Ca52|-|8116..8715|cag13|HP0534|Cag13
Length=199

 Score =  317 bits (1187),  Expect = 3e-88, Method: Compositional matrix adjust.
 Identities = 196/199 (99%), Positives = 199/199 (100%), Gaps = 0/199 (0%)

Query  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60
            MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA
Sbjct  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60

Query  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAIAENPNFLFSKFDRSILGI  120
            LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAI+ENPNFLFSKFDRSILGI
Sbjct  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAITENPNFLFSKFDRSILGI  120

Query  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEVNFYASLKTIEQYNDYVRD  180
            FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEE+NFYA+LKTIEQYNDYVRD
Sbjct  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEMNFYANLKTIEQYNDYVRD  180

Query  181  LLMKFDLEKYMKEKGVQNA  199
            LLMKFDLEKYMKEKGVQNA
Sbjct  181  LLMKFDLEKYMKEKGVQNA  199

7) cagS in NC_017365


> AY330637|7|G7|37811793|AAR03868.1|Helicobacter_pylori_Ca52|-|8116..8715|cag13|HP0534|Cag13
Length=199

 Score =  317 bits (1187),  Expect = 3e-88, Method: Compositional matrix adjust.
 Identities = 196/199 (99%), Positives = 199/199 (100%), Gaps = 0/199 (0%)

Query  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60
            MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA
Sbjct  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60

Query  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLENETMELLHAIAENPNFLFSKFDRSILGI  120
            LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLE+ETMELLHAI+ENPNFLFSKFDRSILGI
Sbjct  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAITENPNFLFSKFDRSILGI  120

Query  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEVNFYANLKTIEQYNDYVRD  180
            FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEE+NFYANLKTIEQYNDYVRD
Sbjct  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEMNFYANLKTIEQYNDYVRD  180

Query  181  LLMKFDLEKYMKEKGVQNA  199
            LLMKFDLEKYMKEKGVQNA
Sbjct  181  LLMKFDLEKYMKEKGVQNA  199

8) HPELS_04005 in NC_017063


> AY330637|7|G7|37811793|AAR03868.1|Helicobacter_pylori_Ca52|-|8116..8715|cag13|HP0534|Cag13
Length=199

 Score =  316 bits (1186),  Expect = 4e-88, Method: Compositional matrix adjust.
 Identities = 196/199 (99%), Positives = 198/199 (99%), Gaps = 0/199 (0%)

Query  1    MSNNMRKLFSMIANSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60
            MSNNMRKLFSMIA+SKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA
Sbjct  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60

Query  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAIAENPNFLFSKFDRSILGI  120
            LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAI+ENPNFLFSKFDRSILGI
Sbjct  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAITENPNFLFSKFDRSILGI  120

Query  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEMNFYANLKTIEQYNDYVRD  180
            FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEMNFYANLKTIEQYNDYVRD
Sbjct  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEMNFYANLKTIEQYNDYVRD  180

Query  181  LLMKFDLEKYMEEKGVQNA  199
            LLMKFDLEKYM EKGVQNA
Sbjct  181  LLMKFDLEKYMKEKGVQNA  199

9) HPLT_02645 in NC_017362


> AY330637|7|G7|37811793|AAR03868.1|Helicobacter_pylori_Ca52|-|8116..8715|cag13|HP0534|Cag13
Length=199

 Score =  316 bits (1185),  Expect = 5e-88, Method: Compositional matrix adjust.
 Identities = 195/199 (98%), Positives = 198/199 (99%), Gaps = 0/199 (0%)

Query  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60
            MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA
Sbjct  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60

Query  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAIAKNPNFLFSKFDRSILGI  120
            LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAI+ NPNFLFSKFDRSILGI
Sbjct  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAITENPNFLFSKFDRSILGI  120

Query  121  FLPFFSKPVMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEMNFYANLKTIEQYNDYVRD  180
            FLPFFSKP+MFKMSIREMDSQIELYGTKLPLLKLFVMTDEEMNFYANLKTIEQYNDYVRD
Sbjct  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEMNFYANLKTIEQYNDYVRD  180

Query  181  LLMKFDLEKYMKERGVQNA  199
            LLMKFDLEKYMKE+GVQNA
Sbjct  181  LLMKFDLEKYMKEKGVQNA  199

10) K751_03290 in NC_021218


> AY330637|7|G7|37811793|AAR03868.1|Helicobacter_pylori_Ca52|-|8116..8715|cag13|HP0534|Cag13
Length=199

 Score =  316 bits (1184),  Expect = 6e-88, Method: Compositional matrix adjust.
 Identities = 196/199 (99%), Positives = 198/199 (99%), Gaps = 0/199 (0%)

Query  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60
            MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA
Sbjct  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60

Query  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLERETMELLHAIAENPNFLFSKFDRSILGI  120
            LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLE ETMELLHAI+ENPNFLFSKFDRSILGI
Sbjct  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAITENPNFLFSKFDRSILGI  120

Query  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEVNFYANLKTIEQYNDYVRD  180
            FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEE+NFYANLKTIEQYNDYVRD
Sbjct  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEMNFYANLKTIEQYNDYVRD  180

Query  181  LLMKFDLEKYMKEKGVQNA  199
            LLMKFDLEKYMKEKGVQNA
Sbjct  181  LLMKFDLEKYMKEKGVQNA  199

11) HMPREF0462_0886 in NC_017375


> AY330637|7|G7|37811793|AAR03868.1|Helicobacter_pylori_Ca52|-|8116..8715|cag13|HP0534|Cag13
Length=199

 Score =  316 bits (1184),  Expect = 6e-88, Method: Compositional matrix adjust.
 Identities = 195/199 (98%), Positives = 199/199 (100%), Gaps = 0/199 (0%)

Query  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60
            MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA
Sbjct  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60

Query  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLEGETMELLHAIAENPNFLFSKFDRSILGI  120
            LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLE+ETMELLHAI+ENPNFLFSKFDRSILGI
Sbjct  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAITENPNFLFSKFDRSILGI  120

Query  121  FLPFFSKPIMFKMSIREMGSQIELYGTKLPLLKLFVMTDEEVNFYANLKTIEQYNDYVRD  180
            FLPFFSKPIMFKMSIREM+SQIELYGTKLPLLKLFVMTDEE+NFYANLKTIEQYNDYVRD
Sbjct  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEMNFYANLKTIEQYNDYVRD  180

Query  181  LLMKFDLEKYMKEKGVQNA  199
            LLMKFDLEKYMKEKGVQNA
Sbjct  181  LLMKFDLEKYMKEKGVQNA  199

12) cagS in NC_011498


> AY330637|7|G7|37811793|AAR03868.1|Helicobacter_pylori_Ca52|-|8116..8715|cag13|HP0534|Cag13
Length=199

 Score =  315 bits (1180),  Expect = 1e-87, Method: Compositional matrix adjust.
 Identities = 193/199 (97%), Positives = 199/199 (100%), Gaps = 0/199 (0%)

Query  1    MSNNMRKLFSMIANSKDKKEKLIESLQENELLSTDEKKKIIDQIKTMHDFFKQMHTNKGA  60
            MSNNMRKLFSMIA+SKDKKEKLIESLQENELL+TDEKKKIIDQIKTMHDFFKQMHTNKGA
Sbjct  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60

Query  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLENETMELLHAIAENPNFLFSKFDRSILGI  120
            LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLE+ETMELLHAI+ENPNFLFSKFDRSILGI
Sbjct  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAITENPNFLFSKFDRSILGI  120

Query  121  FLPFFSKPIMFKMSIREMDSQIELYGTNLPLLKLFVMTDEEVNFYANLKTIEQYNDYVRD  180
            FLPFFSKPIMFKMSIREMDSQIELYGT+LPLLKLFVMTDEE+NFYANLKTIEQYNDYVRD
Sbjct  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEMNFYANLKTIEQYNDYVRD  180

Query  181  LLMKFDLEKYMKEKGVQNA  199
            LLMKFDLEKYMKEKGVQNA
Sbjct  181  LLMKFDLEKYMKEKGVQNA  199

13) cagS in NC_011333


> AY330637|7|G7|37811793|AAR03868.1|Helicobacter_pylori_Ca52|-|8116..8715|cag13|HP0534|Cag13
Length=199

 Score =  315 bits (1181),  Expect = 9e-88, Method: Compositional matrix adjust.
 Identities = 195/199 (98%), Positives = 199/199 (100%), Gaps = 0/199 (0%)

Query  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60
            MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA
Sbjct  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60

Query  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAIAENPNFLFSKFDRSILGI  120
            LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAI+ENPNFLFSKFDRSILGI
Sbjct  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAITENPNFLFSKFDRSILGI  120

Query  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEVDFYANLKTIEQYNDYVRD  180
            FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEE++FYANLKTIEQYNDYVRD
Sbjct  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEMNFYANLKTIEQYNDYVRD  180

Query  181  LLVKFDLEKYMKEKGVQNA  199
            LL+KFDLEKYMKEKGVQNA
Sbjct  181  LLMKFDLEKYMKEKGVQNA  199

14) HPIN_04225 in NC_017372


> AY330637|7|G7|37811793|AAR03868.1|Helicobacter_pylori_Ca52|-|8116..8715|cag13|HP0534|Cag13
Length=199

 Score =  314 bits (1179),  Expect = 1e-87, Method: Compositional matrix adjust.
 Identities = 194/199 (98%), Positives = 197/199 (99%), Gaps = 0/199 (0%)

Query  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKITDQIKTMHDFFKQMHTNKGA  60
            MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKI DQIKTMHDFFKQMHTNKGA
Sbjct  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60

Query  61   LDKVLRNYMKDYRAVVKSIGVDKFKKVYRLLESETMELLHAIAENPNFLFSKFDRSILGI  120
            LDKVLRNYMKDYRAV+KSIGVDKFKKVYRLLESETMELLHAI+ENPNFLFSKFDRSILGI
Sbjct  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAITENPNFLFSKFDRSILGI  120

Query  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEVNFYANLKTIEQYNDYVRD  180
            FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEE+NFYANLKTIEQYNDYVRD
Sbjct  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEMNFYANLKTIEQYNDYVRD  180

Query  181  LLMKFDLEKYMKEKGVQNV  199
            LLMKFDLEKYMKEKGVQN 
Sbjct  181  LLMKFDLEKYMKEKGVQNA  199

15) C694_02755 in NC_018939


> AY330637|7|G7|37811793|AAR03868.1|Helicobacter_pylori_Ca52|-|8116..8715|cag13|HP0534|Cag13
Length=199

 Score =  314 bits (1178),  Expect = 2e-87, Method: Compositional matrix adjust.
 Identities = 194/196 (99%), Positives = 196/196 (100%), Gaps = 0/196 (0%)

Query  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLSTDEKKKIIDQIKTMHDFFKQMHTNKGA  60
            MSNNMRKLFSMIADSKDKKEKLIESLQENELL+TDEKKKIIDQIKTMHDFFKQMHTNKGA
Sbjct  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60

Query  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAIAENPNFLFSKFDRSILGI  120
            LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAI+ENPNFLFSKFDRSILGI
Sbjct  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAITENPNFLFSKFDRSILGI  120

Query  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEMNFYANLKTIEQYNDYVRD  180
            FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEMNFYANLKTIEQYNDYVRD
Sbjct  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEMNFYANLKTIEQYNDYVRD  180

Query  181  LLMKFDLEKYMKEKGV  196
            LLMKFDLEKYMKEKGV
Sbjct  181  LLMKFDLEKYMKEKGV  196

16) HP0534 in NC_000915


> AY330637|7|G7|37811793|AAR03868.1|Helicobacter_pylori_Ca52|-|8116..8715|cag13|HP0534|Cag13
Length=199

 Score =  314 bits (1178),  Expect = 2e-87, Method: Compositional matrix adjust.
 Identities = 194/196 (99%), Positives = 196/196 (100%), Gaps = 0/196 (0%)

Query  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLSTDEKKKIIDQIKTMHDFFKQMHTNKGA  60
            MSNNMRKLFSMIADSKDKKEKLIESLQENELL+TDEKKKIIDQIKTMHDFFKQMHTNKGA
Sbjct  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60

Query  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAIAENPNFLFSKFDRSILGI  120
            LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAI+ENPNFLFSKFDRSILGI
Sbjct  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAITENPNFLFSKFDRSILGI  120

Query  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEMNFYANLKTIEQYNDYVRD  180
            FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEMNFYANLKTIEQYNDYVRD
Sbjct  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEMNFYANLKTIEQYNDYVRD  180

Query  181  LLMKFDLEKYMKEKGV  196
            LLMKFDLEKYMKEKGV
Sbjct  181  LLMKFDLEKYMKEKGV  196

17) cagS in NC_020508


> AY330637|7|G7|37811793|AAR03868.1|Helicobacter_pylori_Ca52|-|8116..8715|cag13|HP0534|Cag13
Length=199

 Score =  314 bits (1178),  Expect = 2e-87, Method: Compositional matrix adjust.
 Identities = 196/199 (99%), Positives = 198/199 (99%), Gaps = 0/199 (0%)

Query  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60
            MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA
Sbjct  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60

Query  61   LDKVLRNYMKDYCAVIKSIGVDKFKKVYRLLESETMELLHAIAENPNFLFSKFDRSILGI  120
            LDKVLRNYMKDY AVIKSIGVDKFKKVYRLLESETMELLHAI+ENPNFLFSKFDRSILGI
Sbjct  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAITENPNFLFSKFDRSILGI  120

Query  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEVNFYANLKTIEQYNDYVRD  180
            FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEE+NFYANLKTIEQYNDYVRD
Sbjct  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEMNFYANLKTIEQYNDYVRD  180

Query  181  LLMKFDLEKYMKEKGVQNA  199
            LLMKFDLEKYMKEKGVQNA
Sbjct  181  LLMKFDLEKYMKEKGVQNA  199

18) C695_02755 in NC_018937


> AY330637|7|G7|37811793|AAR03868.1|Helicobacter_pylori_Ca52|-|8116..8715|cag13|HP0534|Cag13
Length=199

 Score =  314 bits (1178),  Expect = 2e-87, Method: Compositional matrix adjust.
 Identities = 194/196 (99%), Positives = 196/196 (100%), Gaps = 0/196 (0%)

Query  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLSTDEKKKIIDQIKTMHDFFKQMHTNKGA  60
            MSNNMRKLFSMIADSKDKKEKLIESLQENELL+TDEKKKIIDQIKTMHDFFKQMHTNKGA
Sbjct  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60

Query  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAIAENPNFLFSKFDRSILGI  120
            LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAI+ENPNFLFSKFDRSILGI
Sbjct  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAITENPNFLFSKFDRSILGI  120

Query  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEMNFYANLKTIEQYNDYVRD  180
            FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEMNFYANLKTIEQYNDYVRD
Sbjct  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEMNFYANLKTIEQYNDYVRD  180

Query  181  LLMKFDLEKYMKEKGV  196
            LLMKFDLEKYMKEKGV
Sbjct  181  LLMKFDLEKYMKEKGV  196

19) C730_02755 in NC_018938


> AY330637|7|G7|37811793|AAR03868.1|Helicobacter_pylori_Ca52|-|8116..8715|cag13|HP0534|Cag13
Length=199

 Score =  314 bits (1178),  Expect = 2e-87, Method: Compositional matrix adjust.
 Identities = 194/196 (99%), Positives = 196/196 (100%), Gaps = 0/196 (0%)

Query  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLSTDEKKKIIDQIKTMHDFFKQMHTNKGA  60
            MSNNMRKLFSMIADSKDKKEKLIESLQENELL+TDEKKKIIDQIKTMHDFFKQMHTNKGA
Sbjct  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60

Query  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAIAENPNFLFSKFDRSILGI  120
            LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAI+ENPNFLFSKFDRSILGI
Sbjct  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAITENPNFLFSKFDRSILGI  120

Query  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEMNFYANLKTIEQYNDYVRD  180
            FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEMNFYANLKTIEQYNDYVRD
Sbjct  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEMNFYANLKTIEQYNDYVRD  180

Query  181  LLMKFDLEKYMKEKGV  196
            LLMKFDLEKYMKEKGV
Sbjct  181  LLMKFDLEKYMKEKGV  196

20) HPKB_0809 in NC_017354


> AY330637|7|G7|37811793|AAR03868.1|Helicobacter_pylori_Ca52|-|8116..8715|cag13|HP0534|Cag13
Length=199

 Score =  314 bits (1176),  Expect = 2e-87, Method: Compositional matrix adjust.
 Identities = 194/199 (98%), Positives = 198/199 (99%), Gaps = 0/199 (0%)

Query  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60
            MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA
Sbjct  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60

Query  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYQLLESETMELLHAIAKNPNFLFSKFDRSILGI  120
            LDKVLRNYMKDYRAVIKSIGVDKFKKVY+LLESETMELLHAI+ NPNFLFSKFDRSILGI
Sbjct  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAITENPNFLFSKFDRSILGI  120

Query  121  FLPFFSKPVMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEVNFYANLKTIEQYNDYVRD  180
            FLPFFSKP+MFKMSIREMDSQIELYGTKLPLLKLFVMTDEE+NFYANLKTIEQYNDYVRD
Sbjct  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEMNFYANLKTIEQYNDYVRD  180

Query  181  LLMKFDLEKYMKEKGVQNA  199
            LLMKFDLEKYMKEKGVQNA
Sbjct  181  LLMKFDLEKYMKEKGVQNA  199

21) HPPN135_02615 in NC_017379


> AY330637|7|G7|37811793|AAR03868.1|Helicobacter_pylori_Ca52|-|8116..8715|cag13|HP0534|Cag13
Length=199

 Score =  314 bits (1176),  Expect = 3e-87, Method: Compositional matrix adjust.
 Identities = 196/199 (99%), Positives = 198/199 (99%), Gaps = 0/199 (0%)

Query  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60
            MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA
Sbjct  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60

Query  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLCAIAENPNFLFSKFDRSILGI  120
            LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELL AI+ENPNFLFSKFDRSILGI
Sbjct  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAITENPNFLFSKFDRSILGI  120

Query  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEVNFYANLKTIEQYNDYVRD  180
            FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEE+NFYANLKTIEQYNDYVRD
Sbjct  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEMNFYANLKTIEQYNDYVRD  180

Query  181  LLMKFDLEKYMKEKGVQNA  199
            LLMKFDLEKYMKEKGVQNA
Sbjct  181  LLMKFDLEKYMKEKGVQNA  199

22) cagS in NC_017366


> AY330637|7|G7|37811793|AAR03868.1|Helicobacter_pylori_Ca52|-|8116..8715|cag13|HP0534|Cag13
Length=199

 Score =  313 bits (1175),  Expect = 3e-87, Method: Compositional matrix adjust.
 Identities = 194/199 (98%), Positives = 198/199 (99%), Gaps = 0/199 (0%)

Query  1    MSNNMRKLFSMIADSKDKKERLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60
            MSNNMRKLFSMIADSKDKKE+LIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA
Sbjct  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60

Query  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYQLLESETMELLHAIAKNPNFLFSKFDRSILGI  120
            LDKVLRNYMKDYRAVIKSIGVDKFKKVY+LLESETMELLHAI+ NPNFLFSKFDRSILGI
Sbjct  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAITENPNFLFSKFDRSILGI  120

Query  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEVNFYANLKTIEQYNDYVRD  180
            FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEE+NFYANLKTIEQYNDYVRD
Sbjct  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEMNFYANLKTIEQYNDYVRD  180

Query  181  LLMKFDLEKYMKEKGVQNA  199
            LLMKFDLEKYMKEKGVQNA
Sbjct  181  LLMKFDLEKYMKEKGVQNA  199

23) cagS in NC_017367


> AY330637|7|G7|37811793|AAR03868.1|Helicobacter_pylori_Ca52|-|8116..8715|cag13|HP0534|Cag13
Length=199

 Score =  313 bits (1174),  Expect = 3e-87, Method: Compositional matrix adjust.
 Identities = 194/199 (98%), Positives = 198/199 (99%), Gaps = 0/199 (0%)

Query  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60
            MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA
Sbjct  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60

Query  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYQLLENETMELLHAIAKNPNFLFSKFDRSILGI  120
            LDKVLRNYMKDYRAVIKSIGVDKFKKVY+LLE+ETMELLHAI+ NPNFLFSKFDRSILGI
Sbjct  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAITENPNFLFSKFDRSILGI  120

Query  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEVNFYANLKTIEQYNDYVRD  180
            FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEE+NFYANLKTIEQYNDYVRD
Sbjct  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEMNFYANLKTIEQYNDYVRD  180

Query  181  LLMKFDLEKYMKEKGVQNA  199
            LLMKFDLEKYMKEKGVQNA
Sbjct  181  LLMKFDLEKYMKEKGVQNA  199

24) HPAG1_0510 in NC_008086


> AY330637|7|G7|37811793|AAR03868.1|Helicobacter_pylori_Ca52|-|8116..8715|cag13|HP0534|Cag13
Length=199

 Score =  313 bits (1175),  Expect = 3e-87, Method: Compositional matrix adjust.
 Identities = 194/199 (98%), Positives = 198/199 (99%), Gaps = 0/199 (0%)

Query  1    MSNNMRKLFSMIANSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60
            MSNNMRKLFSMIA+SKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA
Sbjct  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60

Query  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYQLLESETMELLHAIAKNPNFLFSKFDRSILGI  120
            LDKVLRNYMKDYRAVIKSIGVDKFKKVY+LLESETMELLHAI+ NPNFLFSKFDRSILGI
Sbjct  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAITENPNFLFSKFDRSILGI  120

Query  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEVNFYANLKTIEQYNDYVRD  180
            FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEE+NFYANLKTIEQYNDYVRD
Sbjct  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEMNFYANLKTIEQYNDYVRD  180

Query  181  LLMKFDLEKYMKEKGVQNA  199
            LLMKFDLEKYMKEKGVQNA
Sbjct  181  LLMKFDLEKYMKEKGVQNA  199

25) HPSH169_02730 in NC_017740


> AY330637|7|G7|37811793|AAR03868.1|Helicobacter_pylori_Ca52|-|8116..8715|cag13|HP0534|Cag13
Length=199

 Score =  313 bits (1174),  Expect = 3e-87, Method: Compositional matrix adjust.
 Identities = 195/199 (98%), Positives = 198/199 (99%), Gaps = 0/199 (0%)

Query  1    MSNNMRKLFSMIADSKDKREKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60
            MSNNMRKLFSMIADSKDK+EKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA
Sbjct  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60

Query  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLCAITENPNFLFSKFDRSILGI  120
            LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELL AITENPNFLFSKFDRSILGI
Sbjct  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAITENPNFLFSKFDRSILGI  120

Query  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEVNFYANLKTIDQYNDYVRD  180
            FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEE+NFYANLKTI+QYNDYVRD
Sbjct  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEMNFYANLKTIEQYNDYVRD  180

Query  181  LLMKFDLEKYMKEKGVQNA  199
            LLMKFDLEKYMKEKGVQNA
Sbjct  181  LLMKFDLEKYMKEKGVQNA  199

26) HPSH417_02545 in NC_017739


> AY330637|7|G7|37811793|AAR03868.1|Helicobacter_pylori_Ca52|-|8116..8715|cag13|HP0534|Cag13
Length=199

 Score =  313 bits (1175),  Expect = 3e-87, Method: Compositional matrix adjust.
 Identities = 195/199 (98%), Positives = 198/199 (99%), Gaps = 0/199 (0%)

Query  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60
            MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA
Sbjct  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60

Query  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLCAIAENPNFLFSKFDRSILGI  120
            LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELL AI+ENPNFLFSKFDRSILGI
Sbjct  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAITENPNFLFSKFDRSILGI  120

Query  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEVNFYANLKTIDQYNDYVRD  180
            FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEE+NFYANLKTI+QYNDYVRD
Sbjct  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEMNFYANLKTIEQYNDYVRD  180

Query  181  LLMKFDLEKYMKEKGVQNA  199
            LLMKFDLEKYMKEKGVQNA
Sbjct  181  LLMKFDLEKYMKEKGVQNA  199

27) HPSH_04255 in NC_010698


> AY330637|7|G7|37811793|AAR03868.1|Helicobacter_pylori_Ca52|-|8116..8715|cag13|HP0534|Cag13
Length=199

 Score =  313 bits (1175),  Expect = 3e-87, Method: Compositional matrix adjust.
 Identities = 195/199 (98%), Positives = 198/199 (99%), Gaps = 0/199 (0%)

Query  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60
            MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA
Sbjct  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60

Query  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLCAIAENPNFLFSKFDRSILGI  120
            LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELL AI+ENPNFLFSKFDRSILGI
Sbjct  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAITENPNFLFSKFDRSILGI  120

Query  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEVNFYANLKTIDQYNDYVRD  180
            FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEE+NFYANLKTI+QYNDYVRD
Sbjct  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEMNFYANLKTIEQYNDYVRD  180

Query  181  LLMKFDLEKYMKEKGVQNA  199
            LLMKFDLEKYMKEKGVQNA
Sbjct  181  LLMKFDLEKYMKEKGVQNA  199

28) cagS in NC_014256


> AY330637|7|G7|37811793|AAR03868.1|Helicobacter_pylori_Ca52|-|8116..8715|cag13|HP0534|Cag13
Length=199

 Score =  313 bits (1174),  Expect = 4e-87, Method: Compositional matrix adjust.
 Identities = 192/199 (97%), Positives = 198/199 (99%), Gaps = 0/199 (0%)

Query  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIMDQIKTMHDFFKQMHTNKGA  60
            MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKI+DQIKTMHDFFKQMHTNKGA
Sbjct  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60

Query  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLENETMELLHAIAKNPNFLFSKFDRSILGI  120
            LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLE+ETMELLHAI+ NPNFLFSKFDRSILGI
Sbjct  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAITENPNFLFSKFDRSILGI  120

Query  121  FLPFFSKPVMFRMSIREMDSQIELYGTKLPLLKLFVMTDEEVNFYANLKTIEQYNDYVRD  180
            FLPFFSKP+MF+MSIREMDSQIELYGTKLPLLKLFVMTDEE+NFYANLKTIEQYNDYVRD
Sbjct  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEMNFYANLKTIEQYNDYVRD  180

Query  181  LLMKFDLEKYMKEKGVQNA  199
            LLMKFDLEKYMKEKGVQNA
Sbjct  181  LLMKFDLEKYMKEKGVQNA  199

29) HPSAT_04110 in NC_017359


> AY330637|7|G7|37811793|AAR03868.1|Helicobacter_pylori_Ca52|-|8116..8715|cag13|HP0534|Cag13
Length=199

 Score =  312 bits (1168),  Expect = 1e-86, Method: Compositional matrix adjust.
 Identities = 193/199 (97%), Positives = 198/199 (99%), Gaps = 0/199 (0%)

Query  1    MSNNMRKLFSIIADSKDKREKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60
            MSNNMRKLFS+IADSKDK+EKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA
Sbjct  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60

Query  61   LDRVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLCAIAENPNFLFSKFDRSILGI  120
            LD+VLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELL AI+ENPNFLFSKFDRSILGI
Sbjct  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAITENPNFLFSKFDRSILGI  120

Query  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEVNFYANLKTIEQYNDYVRD  180
            FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEE+NFYANLKTIEQYNDYVRD
Sbjct  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEMNFYANLKTIEQYNDYVRD  180

Query  181  LLMKFDLEKYMKEKGVQNA  199
            LLMKFDLEKYMKEKGVQNA
Sbjct  181  LLMKFDLEKYMKEKGVQNA  199

30) cagS in NC_000921


> AY330637|7|G7|37811793|AAR03868.1|Helicobacter_pylori_Ca52|-|8116..8715|cag13|HP0534|Cag13
Length=199

 Score =  312 bits (1171),  Expect = 6e-87, Method: Compositional matrix adjust.
 Identities = 194/199 (98%), Positives = 197/199 (99%), Gaps = 0/199 (0%)

Query  1    MSNNMRKLFSMIANSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60
            MSNNMRKLFSMIA+SKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA
Sbjct  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60

Query  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAIAENPNFLFSKFDRSILGI  120
            LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAI+ENPNFLFSKFDRSILGI
Sbjct  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAITENPNFLFSKFDRSILGI  120

Query  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPPLKLFVMTDEEVNFYANLKTIEQYNDYVRD  180
            FLPFFSKPIMFKMSIREMDSQIELYGTKLP LKLFVMTDEE+NFYANLKTIEQYNDYVRD
Sbjct  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEMNFYANLKTIEQYNDYVRD  180

Query  181  LLMKFDLEKYMEEKGVQNA  199
            LLMKFDLEKYM EKGVQNA
Sbjct  181  LLMKFDLEKYMKEKGVQNA  199

31) cagS in NC_020509


> AY330637|7|G7|37811793|AAR03868.1|Helicobacter_pylori_Ca52|-|8116..8715|cag13|HP0534|Cag13
Length=199

 Score =  312 bits (1169),  Expect = 9e-87, Method: Compositional matrix adjust.
 Identities = 193/199 (97%), Positives = 197/199 (99%), Gaps = 0/199 (0%)

Query  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60
            MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA
Sbjct  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60

Query  61   LDKVLRNYMKDYRAVIKSIGVGKFKKVYQLLERETMELLHAIAKNPNFLFSKFDRSILGI  120
            LDKVLRNYMKDYRAVIKSIGV+KFKKVY+LLE ETMELLHAI+ NPNFLFSKFDRSILGI
Sbjct  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAITENPNFLFSKFDRSILGI  120

Query  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEVNFYANLKTIEQYNDYVRD  180
            FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEE+NFYANLKTIEQYNDYVRD
Sbjct  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEMNFYANLKTIEQYNDYVRD  180

Query  181  LLMKFDLEKYMKEKGVQNA  199
            LLMKFDLEKYMKEKGVQNA
Sbjct  181  LLMKFDLEKYMKEKGVQNA  199

32) cagS in NC_017382


> AY330637|7|G7|37811793|AAR03868.1|Helicobacter_pylori_Ca52|-|8116..8715|cag13|HP0534|Cag13
Length=199

 Score =  311 bits (1166),  Expect = 1e-86, Method: Compositional matrix adjust.
 Identities = 194/199 (98%), Positives = 197/199 (99%), Gaps = 0/199 (0%)

Query  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIQTMHDFFKQMHTNKRA  60
            MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQI+TMHDFFKQMHTNK A
Sbjct  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60

Query  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAIAKNPNFLFSKFDRSILGI  120
            LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAI+ NPNFLFSKFDRSILGI
Sbjct  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAITENPNFLFSKFDRSILGI  120

Query  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEVNFYANLKTIEQYNDYVRD  180
            FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEE+NFYANLKTIEQYNDYVRD
Sbjct  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEMNFYANLKTIEQYNDYVRD  180

Query  181  LLMKFDLEKYMKEKGVQNA  199
            LLMKFDLEKYMKEKGVQNA
Sbjct  181  LLMKFDLEKYMKEKGVQNA  199

33) HPCU_02915 in NC_017358


> AY330637|7|G7|37811793|AAR03868.1|Helicobacter_pylori_Ca52|-|8116..8715|cag13|HP0534|Cag13
Length=199

 Score =  311 bits (1167),  Expect = 1e-86, Method: Compositional matrix adjust.
 Identities = 193/199 (97%), Positives = 197/199 (99%), Gaps = 0/199 (0%)

Query  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60
            MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA
Sbjct  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60

Query  61   LDRVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLCAIAKNPNFLFSKFDRSILGI  120
            LD+VLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELL AI+ NPNFLFSKFDRSILGI
Sbjct  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAITENPNFLFSKFDRSILGI  120

Query  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEVNFYANLKTIDQYNDYVRD  180
            FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEE+NFYANLKTI+QYNDYVRD
Sbjct  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEMNFYANLKTIEQYNDYVRD  180

Query  181  LLMKFDLEKYMKEKGVQNA  199
            LLMKFDLEKYMKEKGVQNA
Sbjct  181  LLMKFDLEKYMKEKGVQNA  199

34) K750_04105 in NC_021217


> AY330637|7|G7|37811793|AAR03868.1|Helicobacter_pylori_Ca52|-|8116..8715|cag13|HP0534|Cag13
Length=199

 Score =  311 bits (1167),  Expect = 1e-86, Method: Compositional matrix adjust.
 Identities = 192/199 (97%), Positives = 196/199 (99%), Gaps = 0/199 (0%)

Query  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKITDQIKTMHDFFKQMHTNKGA  60
            MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKI DQIKTMHDFFKQMHTNKGA
Sbjct  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60

Query  61   LDKVLRNYMKDYRAVIKSIGVGKFKKVYRLLESETMNLLHAIAENPNFLFSKFDRSILGI  120
            LDKVLRNYMKDYRAVIKSIGV+KFKKVYRLLESETM+LLHAI+ENPNFLFSKFDRSILGI
Sbjct  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAITENPNFLFSKFDRSILGI  120

Query  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEINFYANLKTIGQYNDYVRD  180
            FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEE+NFYANLKTI QYNDYVRD
Sbjct  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEMNFYANLKTIEQYNDYVRD  180

Query  181  LLMKFDLEKYMEEKGVQNA  199
            LLMKFDLEKYM EKGVQNA
Sbjct  181  LLMKFDLEKYMKEKGVQNA  199

35) HPSH112_04380 in NC_017741


> AY330637|7|G7|37811793|AAR03868.1|Helicobacter_pylori_Ca52|-|8116..8715|cag13|HP0534|Cag13
Length=199

 Score =  311 bits (1165),  Expect = 2e-86, Method: Compositional matrix adjust.
 Identities = 194/199 (98%), Positives = 197/199 (99%), Gaps = 0/199 (0%)

Query  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQIHTNKGA  60
            MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQ+HTNKGA
Sbjct  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60

Query  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLCAIAKNPNFLFSKFDRSILGI  120
            LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELL AI+ NPNFLFSKFDRSILGI
Sbjct  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAITENPNFLFSKFDRSILGI  120

Query  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEVNFYANLKTIEQYNDYVRD  180
            FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEE+NFYANLKTIEQYNDYVRD
Sbjct  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEMNFYANLKTIEQYNDYVRD  180

Query  181  LLMKFDLEKYMKEKGVQNA  199
            LLMKFDLEKYMKEKGVQNA
Sbjct  181  LLMKFDLEKYMKEKGVQNA  199

36) HPB14_04110 in NC_017733


> AY330637|7|G7|37811793|AAR03868.1|Helicobacter_pylori_Ca52|-|8116..8715|cag13|HP0534|Cag13
Length=199

 Score =  311 bits (1164),  Expect = 2e-86, Method: Compositional matrix adjust.
 Identities = 193/199 (97%), Positives = 197/199 (99%), Gaps = 0/199 (0%)

Query  1    MSNNMRKLFLMIANSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60
            MSNNMRKLF MIA+SKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA
Sbjct  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60

Query  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAIAENPNFLFSKFDRSILGI  120
            LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAI+ENPNFLFSKFDRSILGI
Sbjct  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAITENPNFLFSKFDRSILGI  120

Query  121  FLPFFSKPIMFKMSIREMDSQIELYDTKLPLLKLFVMTDEEVNFYANLKTIEQYNDYVRD  180
            FLPFFSKPIMFKMSIREMDSQIELY+TKLPLLKLFVMTDEE+NFYANLKTIEQYNDYVRD
Sbjct  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEMNFYANLKTIEQYNDYVRD  180

Query  181  LLMKFDLEKYMEEKGVQNA  199
            LLMKFDLEKYM EKGVQNA
Sbjct  181  LLMKFDLEKYMKEKGVQNA  199

37) HPPC_02630 in NC_014555


> AY330637|7|G7|37811793|AAR03868.1|Helicobacter_pylori_Ca52|-|8116..8715|cag13|HP0534|Cag13
Length=199

 Score =  310 bits (1162),  Expect = 3e-86, Method: Compositional matrix adjust.
 Identities = 194/199 (98%), Positives = 197/199 (99%), Gaps = 0/199 (0%)

Query  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60
            MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA
Sbjct  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60

Query  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLCAIAENPNFLFSKFDRSILGI  120
            LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELL AI+ENPNFLFSKFDRSILGI
Sbjct  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAITENPNFLFSKFDRSILGI  120

Query  121  FLPFFSKPIMFKMSIREMDSQIELYDTKLPLLKLFVMTDEEVNFYANLKTIEQYNDYVRD  180
            FLPFFSKPIMFKMSIREMDSQIELY+TKLPLLKLFVMTDEE+NFYANLKTIEQYNDYVRD
Sbjct  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEMNFYANLKTIEQYNDYVRD  180

Query  181  LLMKFDLEKYMEEKGVQNA  199
            LLMKFDLEKYM EKGVQNA
Sbjct  181  LLMKFDLEKYMKEKGVQNA  199

38) HPPN120_02595 in NC_017378


> AY330637|7|G7|37811793|AAR03868.1|Helicobacter_pylori_Ca52|-|8116..8715|cag13|HP0534|Cag13
Length=199

 Score =  310 bits (1161),  Expect = 4e-86, Method: Compositional matrix adjust.
 Identities = 193/199 (97%), Positives = 197/199 (99%), Gaps = 0/199 (0%)

Query  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60
            MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA
Sbjct  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60

Query  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLCAIAENPNFLFSKFDRSILGI  120
            LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELL AI+ENPNFLFSKFDRSILGI
Sbjct  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAITENPNFLFSKFDRSILGI  120

Query  121  FLPFFSKPIMFKMSIREMDSQIEFYGTKLPLLKLFVMTDEEVNFYANLKTIEQYNDYIRD  180
            FLPFFSKPIMFKMSIREMDSQIE+YGTKLPLLKLFVMTDEE+NFYANLKTIEQYNDY+RD
Sbjct  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEMNFYANLKTIEQYNDYVRD  180

Query  181  LLMEFDLEKYMKEKGVQNA  199
            LLM FDLEKYMKEKGVQNA
Sbjct  181  LLMKFDLEKYMKEKGVQNA  199

39) hp2017_0515 in NC_017374


> AY330637|7|G7|37811793|AAR03868.1|Helicobacter_pylori_Ca52|-|8116..8715|cag13|HP0534|Cag13
Length=199

 Score =  307 bits (1150),  Expect = 3e-85, Method: Compositional matrix adjust.
 Identities = 188/199 (95%), Positives = 196/199 (99%), Gaps = 0/199 (0%)

Query  1    MSNNMRKLFLMIANSKDKKEKLIKSLQENELLSTDEKKKIMDQVKTMHDFFKQMHTNKGA  60
            MSNNMRKLF MIA+SKDKKEKLI SLQENELL+TDEKKKI+DQ+KTMHDFFKQMHTNKGA
Sbjct  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60

Query  61   LDKVLRNYMKDYRAVIKSIGIDKFKKVYRLLENETMELLHAITENPNFLFSKFDRSILGI  120
            LDKVLRNYMKDYRAVIKSIG+DKFKKVYRLLE+ETMELLHAITENPNFLFSKFDRSILGI
Sbjct  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAITENPNFLFSKFDRSILGI  120

Query  121  FLPFFSKPIMFKMSIREMDSQIELYDTKLPLLKLFVMTDEEVNFYANLKTIEQYNDYVRD  180
            FLPFFSKPIMFKMSIREMDSQIELY+TKLPLLKLFVMTDEE+NFYANLKTIEQYNDYVRD
Sbjct  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEMNFYANLKTIEQYNDYVRD  180

Query  181  LLMKFDLEKYMEEKGVQNA  199
            LLMKFDLEKYM EKGVQNA
Sbjct  181  LLMKFDLEKYMKEKGVQNA  199

40) hp2018_0517 in NC_017381


> AY330637|7|G7|37811793|AAR03868.1|Helicobacter_pylori_Ca52|-|8116..8715|cag13|HP0534|Cag13
Length=199

 Score =  307 bits (1150),  Expect = 3e-85, Method: Compositional matrix adjust.
 Identities = 188/199 (95%), Positives = 196/199 (99%), Gaps = 0/199 (0%)

Query  1    MSNNMRKLFLMIANSKDKKEKLIKSLQENELLSTDEKKKIMDQVKTMHDFFKQMHTNKGA  60
            MSNNMRKLF MIA+SKDKKEKLI SLQENELL+TDEKKKI+DQ+KTMHDFFKQMHTNKGA
Sbjct  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60

Query  61   LDKVLRNYMKDYRAVIKSIGIDKFKKVYRLLENETMELLHAITENPNFLFSKFDRSILGI  120
            LDKVLRNYMKDYRAVIKSIG+DKFKKVYRLLE+ETMELLHAITENPNFLFSKFDRSILGI
Sbjct  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAITENPNFLFSKFDRSILGI  120

Query  121  FLPFFSKPIMFKMSIREMDSQIELYDTKLPLLKLFVMTDEEVNFYANLKTIEQYNDYVRD  180
            FLPFFSKPIMFKMSIREMDSQIELY+TKLPLLKLFVMTDEE+NFYANLKTIEQYNDYVRD
Sbjct  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEMNFYANLKTIEQYNDYVRD  180

Query  181  LLMKFDLEKYMEEKGVQNA  199
            LLMKFDLEKYM EKGVQNA
Sbjct  181  LLMKFDLEKYMKEKGVQNA  199

41) cag13 in NC_017357


> AY330637|7|G7|37811793|AAR03868.1|Helicobacter_pylori_Ca52|-|8116..8715|cag13|HP0534|Cag13
Length=199

 Score =  307 bits (1150),  Expect = 3e-85, Method: Compositional matrix adjust.
 Identities = 188/199 (95%), Positives = 196/199 (99%), Gaps = 0/199 (0%)

Query  1    MSNNMRKLFLMIANSKDKKEKLIKSLQENELLSTDEKKKIMDQVKTMHDFFKQMHTNKGA  60
            MSNNMRKLF MIA+SKDKKEKLI SLQENELL+TDEKKKI+DQ+KTMHDFFKQMHTNKGA
Sbjct  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60

Query  61   LDKVLRNYMKDYRAVIKSIGIDKFKKVYRLLENETMELLHAITENPNFLFSKFDRSILGI  120
            LDKVLRNYMKDYRAVIKSIG+DKFKKVYRLLE+ETMELLHAITENPNFLFSKFDRSILGI
Sbjct  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAITENPNFLFSKFDRSILGI  120

Query  121  FLPFFSKPIMFKMSIREMDSQIELYDTKLPLLKLFVMTDEEVNFYANLKTIEQYNDYVRD  180
            FLPFFSKPIMFKMSIREMDSQIELY+TKLPLLKLFVMTDEE+NFYANLKTIEQYNDYVRD
Sbjct  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEMNFYANLKTIEQYNDYVRD  180

Query  181  LLMKFDLEKYMEEKGVQNA  199
            LLMKFDLEKYM EKGVQNA
Sbjct  181  LLMKFDLEKYMKEKGVQNA  199

42) HPSJM_02620 in NC_014560


> AY330637|7|G7|37811793|AAR03868.1|Helicobacter_pylori_Ca52|-|8116..8715|cag13|HP0534|Cag13
Length=199

 Score =  307 bits (1149),  Expect = 3e-85, Method: Compositional matrix adjust.
 Identities = 189/199 (95%), Positives = 195/199 (98%), Gaps = 0/199 (0%)

Query  1    MSNNMRKLFLMIANSKDKKEKLIKSLQENELLGTDEKKKIMDQIKTMHDFFKQMHTNKGA  60
            MSNNMRKLF MIA+SKDKKEKLI SLQENELL TDEKKKI+DQIKTMHDFFKQMHTNKGA
Sbjct  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60

Query  61   LDKVLRNYMKDYRAVIKSIGIDKFKKVYRLLENETMELLHAITENPNFLFSKFDRSILGI  120
            LDKVLRNYMKDYRAVIKSIG+DKFKKVYRLLE+ETMELLHAITENPNFLFSKFDRSILGI
Sbjct  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAITENPNFLFSKFDRSILGI  120

Query  121  FLPFFSKPIMFKMSIREMDSQIELYDTKLPLLKLFVMTDEEVNFYANLKTIEQYNDYVRD  180
            FLPFFSKPIMFKMSIREMDSQIELY+TKLPLLKLFVMTDEE+NFYANLKTIEQYNDYVRD
Sbjct  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEMNFYANLKTIEQYNDYVRD  180

Query  181  LLMKFDLEKYMEEKGVQNA  199
            LLMKFDLEKYM EKGVQNA
Sbjct  181  LLMKFDLEKYMKEKGVQNA  199

43) HPPC18_02555 in NC_017742


> AY330637|7|G7|37811793|AAR03868.1|Helicobacter_pylori_Ca52|-|8116..8715|cag13|HP0534|Cag13
Length=199

 Score =  306 bits (1148),  Expect = 4e-85, Method: Compositional matrix adjust.
 Identities = 188/199 (95%), Positives = 194/199 (98%), Gaps = 0/199 (0%)

Query  1    MSNNMRKLFLMIANSKDKKEKLIRSLQENELLGTDEKKKIMNQIKTMHDFFKQMHTNKGA  60
            MSNNMRKLF MIA+SKDKKEKLI SLQENELL TDEKKKI++QIKTMHDFFKQMHTNKGA
Sbjct  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60

Query  61   LDKVLRNYMKDYRAVIKSIGIDKFKKVYRLLENETMELLHAITENPNFLFSKFDRSILGI  120
            LDKVLRNYMKDYRAVIKSIG+DKFKKVYRLLE+ETMELLHAITENPNFLFSKFDRSILGI
Sbjct  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAITENPNFLFSKFDRSILGI  120

Query  121  FLPFFSKPIMFKMSIREMDSQIELYNTKLPLLKLFVMTDEEVNFYANLKTIEQYNDYVRD  180
            FLPFFSKPIMFKMSIREMDSQIELY TKLPLLKLFVMTDEE+NFYANLKTIEQYNDYVRD
Sbjct  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEMNFYANLKTIEQYNDYVRD  180

Query  181  LLMKFDLEKYMEEKGVQNA  199
            LLMKFDLEKYM EKGVQNA
Sbjct  181  LLMKFDLEKYMKEKGVQNA  199

44) cagS in NC_017926


> AY330637|7|G7|37811793|AAR03868.1|Helicobacter_pylori_Ca52|-|8116..8715|cag13|HP0534|Cag13
Length=199

 Score =  302 bits (1132),  Expect = 7e-84, Method: Compositional matrix adjust.
 Identities = 187/189 (99%), Positives = 189/189 (100%), Gaps = 0/189 (0%)

Query  1    MIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGALDKVLRNYMK  60
            MIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGALDKVLRNYMK
Sbjct  11   MIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGALDKVLRNYMK  70

Query  61   DYRAVIKSIGVDKFKKVYRLLESETMELLHAIAENPNFLFSKFDRSILGIFLPFFSKPIM  120
            DYRAVIKSIGVDKFKKVYRLLESETMELLHAI+ENPNFLFSKFDRSILGIFLPFFSKPIM
Sbjct  71   DYRAVIKSIGVDKFKKVYRLLESETMELLHAITENPNFLFSKFDRSILGIFLPFFSKPIM  130

Query  121  FKMSIREMDSQIELYGTKLPLLKLFVMTDEEVNFYANLKTIEQYNDYVRDLLMKFDLEKY  180
            FKMSIREMDSQIELYGTKLPLLKLFVMTDEE+NFYANLKTIEQYNDYVRDLLMKFDLEKY
Sbjct  131  FKMSIREMDSQIELYGTKLPLLKLFVMTDEEMNFYANLKTIEQYNDYVRDLLMKFDLEKY  190

Query  181  MKEKGVQNA  189
            MKEKGVQNA
Sbjct  191  MKEKGVQNA  199

45) HPGAM_02725 in NC_017371


> AY330637|7|G7|37811793|AAR03868.1|Helicobacter_pylori_Ca52|-|8116..8715|cag13|HP0534|Cag13
Length=199

 Score =  299 bits (1122),  Expect = 4e-83, Method: Compositional matrix adjust.
 Identities = 183/194 (95%), Positives = 191/194 (99%), Gaps = 0/194 (0%)

Query  1    MSNNMRKLFLMIANSKDKKEKLIKSLQENELLSTDEKKKIMDQIKTMHDFFKQMHTNKGA  60
            MSNNMRKLF MIA+SKDKKEKLI SLQENELL+TDEKKKI+DQIKTMHDFFKQMHTNKGA
Sbjct  1    MSNNMRKLFSMIADSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA  60

Query  61   LDKVLRNYMKDYRAVIKSIGIDKFKKVYRLLENETMQLLHAITENPNFLFSKFDRSILGI  120
            LDKVLRNYMKDYRAVIKSIG+DKFKKVYRLLE+ETM+LLHAITENPNFLFSKFDRSILGI
Sbjct  61   LDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAITENPNFLFSKFDRSILGI  120

Query  121  FLPFFSKPIMFKMSIREMDSQIELYDTKLPLLKLFVMTDEEVNFYANLKTIEQYNDYVRD  180
            FLPFFSKPIMFKMSIREMDSQIELY+TKLPLLKLFVMTDEE+NFYANLKTIEQYNDYVRD
Sbjct  121  FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEMNFYANLKTIEQYNDYVRD  180

Query  181  LLMKFDLEKYMEEK  194
            LLMKFDLEKYM EK
Sbjct  181  LLMKFDLEKYMKEK  194

46) HPV225_0528 in NC_017355


> AY330637|7|G7|37811793|AAR03868.1|Helicobacter_pylori_Ca52|-|8116..8715|cag13|HP0534|Cag13
Length=199

 Score =  251 bits (939),  Expect = 1e-68, Method: Compositional matrix adjust.
 Identities = 151/153 (99%), Positives = 153/153 (100%), Gaps = 0/153 (0%)

Query  1    MHDFFKQMHTNKGALDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAIAENP  60
            MHDFFKQMHTNKGALDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAI+ENP
Sbjct  47   MHDFFKQMHTNKGALDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAITENP  106

Query  61   NFLFSKFDRSILGIFLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEVNFYA  120
            NFLFSKFDRSILGIFLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEE+NFYA
Sbjct  107  NFLFSKFDRSILGIFLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEMNFYA  166

Query  121  NLKTIEQYNDYVRDLLMKFDLEKYMKEKGVQNA  153
            NLKTIEQYNDYVRDLLMKFDLEKYMKEKGVQNA
Sbjct  167  NLKTIEQYNDYVRDLLMKFDLEKYMKEKGVQNA  199