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Homologs of ecpD1 gene of AY144490

178

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) SeAg_B3975
( YP_002148688.1 )

chaperone protein EcpD

NC_011149
(Salmonella enterica SL483)

9e-112

2) CFSAN001992_10055
( YP_007471753.1 )

chaperone protein EcpD

NC_020307
(Salmonella enterica CFSAN001992)

1e-71

3) SeSA_A0208
( YP_002113208.1 )

chaperone protein EcpD

NC_011094
(Salmonella enterica CVM19633)

1e-71

4) SPAB_00231
( YP_001586506.1 )

putative chaperone protein EcpD

NC_010102
(Salmonella enterica SGSC4150; SPB7)

1e-71

5) ecpD
( NP_285836.1 )

chaperone protein EcpD

NC_002655
(Escherichia coli EDL933)

5e-69

6) staB
( NP_454797.1 )

chaperone protein EcpD precursor

NC_003198
(Salmonella enterica CT18)

1e-68

7) STBHUCCB_2090
( YP_005215822.1 )

hypothetical protein

NC_016832
(Salmonella enterica P-stx-12)

1e-68

8) staB
( NP_804072.1 )

chaperone protein EcpD

NC_004631
(Salmonella enterica Ty2)

1e-68

9) TY21A_00970
( YP_007924554.1 )

putative chaperone protein EcpD

NC_021176
(Salmonella enterica Ty21a)

1e-68

10) EcolC_3519
( YP_001726460.1 )

putative chaperone protein EcpD

NC_010468
(Escherichia coli ATCC 8739)

2e-68

11) ecpD
( YP_003497782.1 )

Gram-negative pili assembly chaperone

NC_013941
(Escherichia coli CB9615)

1e-67

12) ECH74115_0149
( YP_002268749.1 )

chaperone protein EcpD

NC_011353
(Escherichia coli EC4115)

9e-68

13) ECs0144
( NP_308171.1 )

chaperone protein EcpD

NC_002695
(Escherichia coli Sakai)

9e-68

14) ECSP_0141
( YP_003076112.1 )

chaperone protein EcpD

NC_013008
(Escherichia coli TW14359)

9e-68

15) CDCO157_0142
( YP_006311002.1 )

putative chaperone protein EcpD

NC_017906
(Escherichia coli Xuzhou21)

9e-68

16) ECO55CA74_00690
( YP_006157325.1 )

putative chaperone protein EcpD

NC_017656
(Escherichia coli RM12579)

2e-66

17) EcSMS35_0151
( YP_001742268.1 )

putative chaperone protein EcpD

NC_010498
(Escherichia coli SMS-3-5)

3e-66

18) ECP_0150
( YP_668089.1 )

chaperone protein EcpD

NC_008253
(Escherichia coli 536)

2e-65

19) ecpD
( YP_006104299.1 )

periplasmic chaperone EcpD precursor

NC_017631
(Escherichia coli ABU 83972)

2e-65

20) ecpD
( YP_851340.1 )

chaperone protein EcpD

NC_008563
(Escherichia coli APEC O1)

2e-65

21) ecpD
( NP_752121.1 )

chaperone protein EcpD

NC_004431
(Escherichia coli CFT073)

2e-65

22) ecpD
( YP_006152299.1 )

putative chaperone protein EcpD

NC_017652
(Escherichia coli clone D i14)

2e-65

23) ecpD
( YP_006147380.1 )

putative chaperone protein EcpD

NC_017651
(Escherichia coli clone D i2)

2e-65

24) ecpD
( YP_002396229.1 )

putative chaperone protein EcpD

NC_011745
(Escherichia coli ED1a)

2e-65

25) ECOK1_0142
( YP_006099397.1 )

pili assembly chaperone

NC_017628
(Escherichia coli IHE3034)

2e-65

26) ecpD
( YP_002555107.1 )

chaperone protein ecpD

NC_011993
(Escherichia coli LF82)

2e-65

27) NRG857_00725
( YP_006118511.1 )

putative chaperone protein EcpD

NC_017634
(Escherichia coli NRG 857C)

2e-65

28) focC_1
( YP_008570091.1 )

Chaperone protein focC precursor

NC_022370
(Escherichia coli PMV-1)

2e-65

29) ecpD
( YP_002389996.1 )

chaperone protein EcpD

NC_011742
(Escherichia coli S88)

2e-65

30) UM146_23505
( YP_006113532.1 )

putative chaperone protein EcpD

NC_017632
(Escherichia coli UM146)

2e-65

31) ecpD
( YP_539195.1 )

chaperone protein EcpD

NC_007946
(Escherichia coli UTI89)

2e-65

32) A464_187
( YP_008320783.1 )

Chaperone protein EcpD

NC_021870
(Salmonella bongori N268-08)

4e-64

33) sbaC
( YP_004729086.1 )

fimbrial chaperone protein

NC_015761
(Salmonella bongori NCTC 12419)

6e-64

34) ecpD
( YP_406685.1 )

chaperone protein EcpD

NC_007613
(Shigella boydii Sb227)

9e-64

35) EcE24377A_0143
( YP_001461309.1 )

chaperone protein EcpD

NC_009801
(Escherichia coli E24377A)

1e-63

36) EcHS_A0143
( YP_001456925.1 )

chaperone protein EcpD

NC_009800
(Escherichia coli HS)

1e-63

37) ecpD
( YP_002385634.1 )

putative chaperone protein EcpD

NC_011741
(Escherichia coli IAI1)

1e-63

38) SSON53_00815
( YP_005454750.1 )

putative chaperone protein EcpD

NC_016822
(Shigella sonnei 53G)

1e-63

39) ecpD
( YP_309180.1 )

chaperone protein EcpD

NC_007384
(Shigella sonnei Ss046)

1e-63

40) ETEC_0136
( YP_006113729.1 )

fimbrial chaperone protein

NC_017633
(Escherichia coli ETEC H10407)

2e-63

41) ecpD
( YP_001729097.1 )

putative chaperone protein EcpD

NC_010473
(Escherichia coli K-12)

2e-63

42) ecpD
( YP_002925335.1 )

putative chaperone protein EcpD

NC_012759
(Escherichia coli K-12)

2e-63

43) ecpD
( YP_007555843.1 )

predicted periplasmic pilin chaperone

NC_020518
(Escherichia coli K-12)

2e-63

44) ecpD
( YP_488443.1 )

periplasmic pilin chaperone

NC_007779
(Escherichia coli K-12)

2e-63

45) yadV
( NP_414682.1 )

predicted periplasmic pilin chaperone

NC_000913
(Escherichia coli K12)

2e-63

46) UMNK88_142
( YP_006131968.1 )

chaperone protein EcpD

NC_017641
(Escherichia coli UMNK88)

2e-63

47) ECO111_0142
( YP_003232692.1 )

putative pilin chaperone

NC_013364
(Escherichia coli 11128)

9e-64

48) ECO26_0143
( YP_003227242.1 )

chaperone protein EcpD

NC_013361
(Escherichia coli 11368)

9e-64

49) ECO103_0140
( YP_003220152.1 )

pilin chaperone

NC_013353
(Escherichia coli 12009)

9e-64

50) O3M_20765
( YP_006771774.1 )

chaperone protein EcpD

NC_018650
(Escherichia coli 2009EL-2050)

9e-64

51) O3O_04520
( YP_006785962.1 )

chaperone protein EcpD

NC_018661
(Escherichia coli 2009EL-2071)

9e-64

52) O3K_20865
( YP_006780837.1 )

putative chaperone protein EcpD

NC_018658
(Escherichia coli 2011C-3493)

9e-64

53) ecpD
( YP_002401273.1 )

chaperone protein EcpD

NC_011748
(Escherichia coli 55989)

9e-64

54) APECO78_04140
( YP_007380009.1 )

chaperone protein EcpD

NC_020163
(Escherichia coli APEC O78)

9e-64

55) ecpD
( YP_002998004.1 )

pilin chaperone similar to PapD

NC_012892
(Escherichia coli BL21(DE3))

9e-64

56) ecpD
( YP_003052811.1 )

periplasmic pilin chaperone

NC_012971
(Escherichia coli BL21(DE3))

9e-64

57) ECBD_3479
( YP_003037663.1 )

chaperone protein EcpD

NC_012947
(Escherichia coli Escherichia coli BL21-Gold(DE3)pLysS AG)

9e-64

58) EKO11_3776
( YP_005279413.1 )

Pili assembly chaperone, N-terminal protein

NC_016902
(Escherichia coli KO11FL)

9e-64

59) ecpD
( YP_006162476.1 )

putative chaperone protein EcpD

NC_017660
(Escherichia coli KO11FL)

9e-64

60) LY180_00680
( YP_008563289.1 )

chaperone protein EcpD

NC_022364
(Escherichia coli LY180)

9e-64

61) ecpD
( YP_003043368.1 )

putative chaperone protein EcpD

NC_012967
(Escherichia coli REL606)

9e-64

62) ECSE_0140
( YP_002291415.1 )

putative chaperone protein EcpD

NC_011415
(Escherichia coli SE11)

9e-64

63) ecpD
( YP_006122929.1 )

periplasmic pilin chaperone

NC_017635
(Escherichia coli W)

9e-64

64) ecpD
( YP_006171590.1 )

putative chaperone protein EcpD

NC_017664
(Escherichia coli W)

9e-64

65) ecpD
( YP_006142281.1 )

putative chaperone protein EcpD

NC_017646
(Escherichia coli CE10)

2e-63

66) ecpD
( YP_002406190.1 )

putative chaperone protein EcpD

NC_011750
(Escherichia coli IAI39)

2e-63

67) ecpD
( YP_002381387.1 )

chaperone protein EcpD

NC_011740
(Escherichia fergusonii ATCC 35469)

3e-63

68) ecpD
( YP_006137225.1 )

Putative chaperone protein

NC_017644
(Escherichia coli NA114)

4e-63

69) ECSF_0153
( YP_003348143.1 )

putative pilin chaperone

NC_013654
(Escherichia coli SE15)

4e-63

70) EcDH1_3462
( YP_006093366.1 )

Pili assembly chaperone, N-terminal

NC_017625
(Escherichia coli DH1)

4e-63

71) ecpD
( YP_006127535.1 )

putative chaperone protein EcpD

NC_017638
(Escherichia coli DH1)

4e-63

72) EC042_0140
( YP_006094473.1 )

fimbrial chaperone protein

NC_017626
(Escherichia coli 042)

1e-62

73) ECUMN_0137
( YP_002410915.1 )

putative chaperone protein EcpD

NC_011751
(Escherichia coli UMN026)

5e-62

74) ENC_46520
( YP_007847815.1 )

P pilus assembly protein, chaperone PapD

NC_021046
(Enterobacter cloacae NCTC 9394)

2e-54

75) ECL_00941
( YP_003611453.1 )

putative chaperone protein EcpD

NC_014121
(Enterobacter cloacae ATCC 13047)

1e-52

76) A3UG_03910
( YP_006476231.1 )

putative chaperone protein EcpD

NC_018079
(Enterobacter cloacae SDM)

6e-53

77) SSPA0180
( YP_002141025.1 )

chaperone protein EcpD

NC_011147
(Salmonella enterica AKU12601)

4e-52

78) stkB
( YP_149529.1 )

fimbriae; chaparone

NC_006511
(Salmonella enterica ATCC 9150)

4e-52

79) SEEB0189_18415
( YP_008309967.1 )

fimbrial assembly chaperone protein StcB

NC_021844
(Salmonella enterica CFSAN000189)

1e-51

80) Q7S_17760
( YP_005403332.1 )

putative chaperone protein EcpD

NC_017047
(Rahnella aquatilis HX2)

9e-52

81) Rahaq_3524
( YP_004214243.1 )

Pili assembly chaperone, N-terminal protein

NC_015061
(Rahnella sp. Y9602)

9e-52

82) SEEH1578_10005
( YP_008246070.1 )

chaperone protein EcpD

NC_021810
(Salmonella enterica 41578)

2e-51

83) SU5_0827
( YP_006086471.1 )

Chaperone protein EcpD

NC_017623
(Salmonella enterica B182)

2e-51

84) CFSAN002069_08255
( YP_008250479.1 )

fimbrial assembly chaperone protein StcB

NC_021812
(Salmonella enterica CFSAN002069)

2e-51

85) SeHA_C0210
( YP_002044163.1 )

chaperone protein EcpD

NC_011083
(Salmonella enterica SL476)

2e-51

86) ecpD
( YP_586386.1 )

pilus chaperone

NC_007974
(Cupriavidus metallidurans CH34)

3e-51

87) KOX_11195
( YP_005018204.1 )

putative chaperone protein EcpD

NC_016612
(Klebsiella oxytoca KCTC 1686)

7e-51

88) CFSAN002050_07420
( YP_008259427.1 )

fimbrial assembly chaperone protein StcB

NC_021818
(Salmonella enterica CFSAN002050)

8e-51

89) Rahaq2_0706
( YP_005198772.1 )

P pilus assembly protein, chaperone PapD

NC_016818
(Rahnella aquatilis CIP 78.65)

8e-51

90) Rahaq2_3604
( YP_005201540.1 )

P pilus assembly protein, chaperone PapD

NC_016818
(Rahnella aquatilis CIP 78.65)

1e-50

91) bgla_1p0210
( YP_004362455.1 )

pili assembly chaperone

NC_015382
(Burkholderia gladioli BSR3)

6e-50

92) ECENHK_04120
( YP_006577335.1 )

chaperone protein EcpD

NC_018405
(Enterobacter cloacae ENHKU01)

2e-49

93) BamMC406_6637
( YP_001812302.1 )

Pili assembly chaperone, N-terminal

NC_010553
(Burkholderia ambifaria MC40-6)

1e-48

94) BamMC406_6668
( YP_001812321.1 )

Pili assembly chaperone, N-terminal

NC_010553
(Burkholderia ambifaria MC40-6)

2e-48

95) CKO_03232
( YP_001454752.1 )

putative chaperone protein EcpD

NC_009792
(Citrobacter koseri ATCC BAA-895)

9e-48

96) fimC
( YP_587091.1 )

pili assembly chaperone

NC_007974
(Cupriavidus metallidurans CH34)

7e-47

97) YPTS_2766
( YP_001873183.1 )

Pili assembly chaperone, N-terminal

NC_010634
(Yersinia pseudotuberculosis PB1/+)

3e-46

98) YpAngola_A2659
( YP_001607063.1 )

fimbrial assembly chaperone protein

NC_010159
(Yersinia pestis Angola)

8e-46

99) YPZ3_1997
( YP_003568169.1 )

fimbrial assembly chaperone protein

NC_014029
(Yersinia pestis Z176003)

8e-46

100) YpsIP31758_1676
( YP_001400653.1 )

fimbrial assembly chaperone protein

NC_009708
(Yersinia pseudotuberculosis IP 31758)

1e-45

101) ecpD2
( NP_993888.1 )

pili chaperone protein

NC_005810
(Yersinia pestis 91001)

2e-45

102) A1122_11255
( YP_005521911.1 )

putative pili chaperone protein

NC_017168
(Yersinia pestis A1122)

2e-45

103) YpAngola_A2694
( YP_001607094.1 )

pili assembly chaperone

NC_010159
(Yersinia pestis Angola)

2e-45

104) YPA_2135
( YP_652045.1 )

putative pili chaperone protein

NC_008150
(Yersinia pestis Antiqua)

2e-45

105) YPO2944
( YP_002347870.1 )

pili chaperone protein

NC_003143
(Yersinia pestis CO92)

2e-45

106) YPD4_2578
( YP_005505788.1 )

pili chaperone protein

NC_017154
(Yersinia pestis D106004)

2e-45

107) YPD8_2573
( YP_005509639.1 )

pili chaperone protein

NC_017160
(Yersinia pestis D182038)

2e-45

108) YPC_1454
( YP_005623364.1 )

putative pili chaperone protein

NC_017265
(Yersinia pestis Harbin 35)

2e-45

109) ecpD
( NP_668861.1 )

pilin chaperone

NC_004088
(Yersinia pestis KIM)

2e-45

110) YPN_1436
( YP_647366.1 )

pili chaperone protein

NC_008149
(Yersinia pestis Nepal516)

2e-45

111) YPDSF_2052
( YP_001163404.1 )

pili chaperone protein

NC_009381
(Yersinia pestis Pestoides F)

2e-45

112) YPZ3_2592
( YP_003568764.1 )

pili chaperone protein

NC_014029
(Yersinia pestis Z176003)

2e-45

113) YpsIP31758_1364
( YP_001400343.1 )

pili assembly chaperone

NC_009708
(Yersinia pseudotuberculosis IP 31758)

2e-45

114) YPTB2669
( YP_071179.1 )

pili chaperone protein

NC_006155
(Yersinia pseudotuberculosis IP 32953)

2e-45

115) YPK_1476
( YP_001720222.1 )

pili assembly chaperone

NC_010465
(Yersinia pseudotuberculosis YPIII)

2e-45

116) UMN179_00810
( YP_004419737.1 )

putative fimbrial chaperone protein

NC_015460
(Gallibacterium anatis UMN179)

4e-45

117) H681_03335
( YP_007656089.1 )

chaperone protein ecpD

NC_020829
(Pseudomonas denitrificans ATCC 13867)

6e-45

118) YPD4_1517
( YP_005504728.1 )

fimbrial assembly chaperone protein

NC_017154
(Yersinia pestis D106004)

8e-45

119) YPD8_2034
( YP_005509106.1 )

fimbrial assembly chaperone protein

NC_017160
(Yersinia pestis D182038)

8e-45

120) ecpD1
( NP_993084.1 )

chaperone protein

NC_005810
(Yersinia pestis 91001)

2e-44

121) A1122_17340
( YP_005523107.1 )

putative chaperone protein

NC_017168
(Yersinia pestis A1122)

2e-44

122) YPA_1813
( YP_651724.1 )

putative chaperone protein

NC_008150
(Yersinia pestis Antiqua)

2e-44

123) ecpD
( YP_002346711.1 )

chaperone protein

NC_003143
(Yersinia pestis CO92)

2e-44

124) YPC_2109
( YP_005623983.1 )

putative chaperone protein

NC_017265
(Yersinia pestis Harbin 35)

2e-44

125) ecpD
( NP_669186.1 )

pilin chaperone

NC_004088
(Yersinia pestis KIM)

2e-44

126) YPN_1922
( YP_647851.1 )

chaperone protein

NC_008149
(Yersinia pestis Nepal516)

2e-44

127) YPDSF_1740
( YP_001163098.1 )

chaperone protein

NC_009381
(Yersinia pestis Pestoides F)

2e-44

128) ecpD
( YP_070888.1 )

chaperone protein

NC_006155
(Yersinia pseudotuberculosis IP 32953)

2e-44

129) YPTS_2447
( YP_001872865.1 )

Pili assembly chaperone, N-terminal

NC_010634
(Yersinia pseudotuberculosis PB1/+)

2e-44

130) YE105_C3428
( YP_004299625.1 )

hypothetical protein

NC_015224
(Yersinia enterocolitica 105.5R(r))

4e-44

131) Y11_26071
( YP_006006106.1 )

putative pili chaperone protein

NC_017564
(Yersinia enterocolitica Y11)

4e-44

132) fimC
( YP_582730.1 )

periplasmic chaperone

NC_007973
(Cupriavidus metallidurans CH34)

1e-43

133) Psesu_2031
( YP_004147098.1 )

Pili assembly chaperone, N-terminal

NC_014924
(Pseudoxanthomonas suwonensis 11-1)

8e-44

134) UMN179_00751
( YP_004419679.1 )

putative chaperone protein EcpD

NC_015460
(Gallibacterium anatis UMN179)

1e-43

135) G655_20335
( YP_007710906.1 )

chaperone CupC

NC_020912
(Pseudomonas aeruginosa B136-33)

2e-43

136) cupC2
( YP_792278.1 )

chaperone CupC

NC_008463
(Pseudomonas aeruginosa UCBPP-PA14)

2e-43

137) XFLM_05560
( YP_006000417.1 )

Pili assembly chaperone, N-terminal

NC_017562
(Xylella fastidiosa GB514)

3e-43

138) Xfasm12_0064
( YP_001774737.1 )

chaperone protein

NC_010513
(Xylella fastidiosa M12)

3e-43

139) XfasM23_0053
( YP_001828784.1 )

Pili assembly chaperone, N-terminal

NC_010577
(Xylella fastidiosa M23)

3e-43

140) PD0061
( NP_778312.1 )

chaperone protein

NC_004556
(Xylella fastidiosa Temecula1)

3e-43

141) fimB
( YP_003208550.1 )

chaperone protein fimB/fhaD

NC_013282
(Cronobacter turicensis z3032)

4e-43

142) A225_0949
( YP_006496710.1 )

Chaperone protein EcpD

NC_018106
(Klebsiella oxytoca E718)

6e-43

143) ES15_3731
( YP_006344815.1 )

chaperone protein

NC_017933
(Cronobacter sakazakii ES15)

8e-43

144) ESA_03814
( YP_001439836.1 )

hypothetical protein

NC_009778
(Cronobacter sakazakii ATCC BAA-894)

1e-42

145) cupC2
( NP_249684.1 )

chaperone CupC2

NC_002516
(Pseudomonas aeruginosa PAO1)

1e-42

146) B5T_00872
( YP_006819499.1 )

Chaperone protein

NC_018691
(Alcanivorax dieselolei B5)

2e-42

147) CSSP291_17630
( YP_007442382.1 )

hypothetical protein

NC_020260
(Cronobacter sakazakii Sp291)

2e-42

148) ROD_27791
( YP_003366308.1 )

fimbrial chaperone protein

NC_013716
(Citrobacter rodentium ICC168)

3e-42

149) CKO_05123
( YP_001456602.1 )

hypothetical protein

NC_009792
(Citrobacter koseri ATCC BAA-895)

6e-42

150) PADK2_20780
( YP_006484127.1 )

chaperone CupC2

NC_018080
(Pseudomonas aeruginosa DK2)

6e-42

151) ecpD1
( YP_007998791.1 )

chaperone protein EcpD

NC_021237
(Pseudomonas fluorescens CHA0)

1e-41

152) cupB2
( YP_258590.1 )

pilus assembly chaperone CupB2

NC_004129
(Pseudomonas protegens Pf-5)

1e-41

153) aef2B
( YP_004138290.1 )

F17-like fimbrial chaperone

NC_014922
(Haemophilus influenzae F3047)

1e-41

154) M062_05415
( YP_008131531.1 )

molecular chaperone

NC_021577
(Pseudomonas aeruginosa RP73)

1e-41

155) cupC2
( YP_005976638.1 )

chaperone CupC2

NC_017548
(Pseudomonas aeruginosa M18)

8e-42

156) cupC2
( YP_002441916.1 )

chaperone CupC2

NC_011770
(Pseudomonas aeruginosa LESB58)

9e-42

157) aef2B
( YP_004134855.1 )

f17-like fimbrial chaperone

NC_014920
(Haemophilus influenzae F3031)

2e-41

158) fimB3
( YP_001633084.1 )

pili assembly chaperone

NC_010170
(Bordetella petrii DSM 12804)

3e-41

159) PMI0535
( YP_002150305.1 )

fimbrial chaperone

NC_010554
(Proteus mirabilis HI4320)

3e-40

160) mrkB
( YP_008137590.1 )

chaperone protein MrkB

NC_021591
(Serratia odorifera 4Rx13)

9e-40

161) M621_07760
( YP_008158371.1 )

pilus assembly protein

NC_021659
(Serratia plymuthica S13)

9e-40

162) fimB
( YP_005589965.1 )

chaperone protein

NC_017223
(Bordetella pertussis CS)

1e-39

163) fimB
( NP_880572.1 )

chaperone protein

NC_002929
(Bordetella pertussis Tohama I)

1e-39

164) fimB
( YP_006626469.1 )

chaperone protein

NC_018518
(Bordetella pertussis 18323)

2e-39

165) fimB
( YP_006966874.1 )

chaperone protein

NC_019382
(Bordetella bronchiseptica 253)

3e-39

166) fimB
( YP_006900395.1 )

chaperone protein

NC_018829
(Bordetella bronchiseptica MO149)

3e-39

167) fimB
( NP_889527.1 )

chaperone protein

NC_002927
(Bordetella bronchiseptica RB50)

3e-39

168) fimB
( NP_885211.1 )

chaperone protein

NC_002928
(Bordetella parapertussis 12822)

3e-39

169) fimB
( YP_006896575.1 )

chaperone protein

NC_018828
(Bordetella parapertussis Bpp5)

3e-39

170) BB2000_2233
( YP_008398759.1 )

fimbrial chaperone

NC_022000
(Proteus mirabilis BB2000)

3e-39

171) YE2694
( YP_001006885.1 )

putative pili chaperone protein

NC_008800
(Yersinia enterocolitica 8081)

5e-39

172) YE105_C1593
( YP_004297792.1 )

putative pili chaperone protein

NC_015224
(Yersinia enterocolitica 105.5R(r))

4e-39

173) Y11_15731
( YP_006005072.1 )

chaperone protein fimC

NC_017564
(Yersinia enterocolitica Y11)

4e-39

174) fhaD
( YP_786480.1 )

Fimbrial chaperone protein

NC_010645
(Bordetella avium 197N)

8e-39

175) ecpD
( NP_900965.1 )

chaperone protein ecpD

NC_005085
(Chromobacterium violaceum ATCC 12472)

1e-37

176) Shewmr4_2236
( YP_734365.1 )

pili assembly chaperone

NC_008321
(Shewanella sp. MR-4)

8e-37

177) ACIAD0388
( YP_045157.1 )

fimbrial chaperone protein

NC_005966
(Acinetobacter sp. ADP1)

3e-36

178) PFL_3923
( YP_261023.1 )

pili assembly chaperone

NC_004129
(Pseudomonas protegens Pf-5)

8e-34

• Sequence Alignments

1) SeAg_B3975 in NC_011149


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  395 bits (1486),  Expect = 9e-112, Method: Compositional matrix adjust.
 Identities = 245/247 (99%), Positives = 245/247 (99%), Gaps = 0/247 (0%)

Query  1    MLCHLRTAFTVITLTGTLLSNVAWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTW  60
            MLCHLRTAFTVITLTGTLLSNVAWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTW
Sbjct  3    MLCHLRTAFTVITLTGTLLSNVAWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTW  62

Query  61   LDTGNDNTEPGAIKVPFNATPPVSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVP  120
            LDTGNDNTEPGAIKVPFNATPPVSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVP
Sbjct  63   LDTGNDNTEPGAIKVPFNATPPVSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVP  122

Query  121  PKANKNENSAAQNTLQLAFRTRIKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNN  180
            PKANKNENSAAQNTLQ AFRTRIKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNN
Sbjct  123  PKANKNENSAAQNTLQSAFRTRIKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNN  182

Query  181  PTPYFVSFNSIELESTGKKYIVDGQMAAPLTETSFTLKTATTISSGKINYSFINDFGGII  240
            PTPYFVSFNSIELESTGKKYIVDGQMAAPLTETSFTLKTATT SSGKINYSFINDFGGII
Sbjct  183  PTPYFVSFNSIELESTGKKYIVDGQMAAPLTETSFTLKTATTTSSGKINYSFINDFGGII  242

Query  241  NATASLQ  247
            NATASLQ
Sbjct  243  NATASLQ  249

2) CFSAN001992_10055 in NC_020307


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  262 bits (979),  Expect = 1e-71, Method: Compositional matrix adjust.
 Identities = 145/246 (59%), Positives = 198/246 (81%), Gaps = 2/246 (0%)

Query  1    MSHSLKFTLSAIALTGALFSSASQADIIISGTRIIYDANKKDVSVRLENKGKSPLLVQNW  60
            + H L+ +++ I+LTG+L+S+ + ADI+ISGTRI+Y + +KDV+VRLENKG  PLLVQ W
Sbjct  4    LCH-LRTAFTVITLTGTLLSNVAWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTW  62

Query  61   IDLGNDNAEPGSIKAPFAATPPVSRIEPKRGQSIKIMYTATESLPKDRESVFWFNVLEVP  120
            +D GNDN+EPG+IK PF ATPPVSRI+PK+GQ+IKIMYT++++LP DRESVFWFNVLEVP
Sbjct  63   LDTGNDNTEPGAIKVPFNATPPVSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVP  122

Query  121  PKANTNQE-ENKNLLQLAFRTRIKLFYRPTGLPGAPAEAAKQLKWQVASEQGHAVLRADN  179
            PKAN N++   +N LQ AFRTRIKLFYRP GL + ++EA+ +L W++  EQG +V+  +N
Sbjct  123  PKANKNENSAAQNTLQSAFRTRIKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNN  182

Query  180  PTPYYVSFNSATYTSGGKRYDVDATMVAPFGKAAFTVKGLQNASAGKLEFQSINDYGGII  239
            PTPY+VSFNS    S GK+Y VD+ M AP+  ++FT+K    +S+GK+++  IND+GGII
Sbjct  183  PTPYFVSFNSIELESTGKKYIVDGQMAAPLTETSFTLKTATTTSSGKINYSFINDFGGII  242

Query  240  AGSASL  245
             ++ASL
Sbjct  243  NATASL  248

3) SPAB_00231 in NC_010102


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  262 bits (979),  Expect = 1e-71, Method: Compositional matrix adjust.
 Identities = 145/246 (59%), Positives = 198/246 (81%), Gaps = 2/246 (0%)

Query  1    MSHSLKFTLSAIALTGALFSSASQADIIISGTRIIYDANKKDVSVRLENKGKSPLLVQNW  60
            + H L+ +++ I+LTG+L+S+ + ADI+ISGTRI+Y + +KDV+VRLENKG  PLLVQ W
Sbjct  4    LCH-LRTAFTVITLTGTLLSNVAWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTW  62

Query  61   IDLGNDNAEPGSIKAPFAATPPVSRIEPKRGQSIKIMYTATESLPKDRESVFWFNVLEVP  120
            +D GNDN+EPG+IK PF ATPPVSRI+PK+GQ+IKIMYT++++LP DRESVFWFNVLEVP
Sbjct  63   LDTGNDNTEPGAIKVPFNATPPVSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVP  122

Query  121  PKANTNQE-ENKNLLQLAFRTRIKLFYRPTGLPGAPAEAAKQLKWQVASEQGHAVLRADN  179
            PKAN N++   +N LQ AFRTRIKLFYRP GL + ++EA+ +L W++  EQG +V+  +N
Sbjct  123  PKANKNENSAAQNTLQSAFRTRIKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNN  182

Query  180  PTPYYVSFNSATYTSGGKRYDVDATMVAPFGKAAFTVKGLQNASAGKLEFQSINDYGGII  239
            PTPY+VSFNS    S GK+Y VD+ M AP+  ++FT+K    +S+GK+++  IND+GGII
Sbjct  183  PTPYFVSFNSIELESTGKKYIVDGQMAAPLTETSFTLKTATTTSSGKINYSFINDFGGII  242

Query  240  AGSASL  245
             ++ASL
Sbjct  243  NATASL  248

4) SeSA_A0208 in NC_011094


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  262 bits (979),  Expect = 1e-71, Method: Compositional matrix adjust.
 Identities = 145/246 (59%), Positives = 198/246 (81%), Gaps = 2/246 (0%)

Query  1    MSHSLKFTLSAIALTGALFSSASQADIIISGTRIIYDANKKDVSVRLENKGKSPLLVQNW  60
            + H L+ +++ I+LTG+L+S+ + ADI+ISGTRI+Y + +KDV+VRLENKG  PLLVQ W
Sbjct  4    LCH-LRTAFTVITLTGTLLSNVAWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTW  62

Query  61   IDLGNDNAEPGSIKAPFAATPPVSRIEPKRGQSIKIMYTATESLPKDRESVFWFNVLEVP  120
            +D GNDN+EPG+IK PF ATPPVSRI+PK+GQ+IKIMYT++++LP DRESVFWFNVLEVP
Sbjct  63   LDTGNDNTEPGAIKVPFNATPPVSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVP  122

Query  121  PKANTNQE-ENKNLLQLAFRTRIKLFYRPTGLPGAPAEAAKQLKWQVASEQGHAVLRADN  179
            PKAN N++   +N LQ AFRTRIKLFYRP GL + ++EA+ +L W++  EQG +V+  +N
Sbjct  123  PKANKNENSAAQNTLQSAFRTRIKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNN  182

Query  180  PTPYYVSFNSATYTSGGKRYDVDATMVAPFGKAAFTVKGLQNASAGKLEFQSINDYGGII  239
            PTPY+VSFNS    S GK+Y VD+ M AP+  ++FT+K    +S+GK+++  IND+GGII
Sbjct  183  PTPYFVSFNSIELESTGKKYIVDGQMAAPLTETSFTLKTATTTSSGKINYSFINDFGGII  242

Query  240  AGSASL  245
             ++ASL
Sbjct  243  NATASL  248

5) ecpD in NC_002655


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  253 bits (945),  Expect = 5e-69, Method: Compositional matrix adjust.
 Identities = 139/249 (56%), Positives = 197/249 (80%), Gaps = 7/249 (2%)

Query  1    MLMFPLVKKTVSALFVSTLLASAPAFADIIISGTRIIYNADKKDVNVRLENKGNRPLLIQ  60
            MLM+  ++ + + + ++  L S  A ADI+ISGTRI+Y + +KDVNVRLENKG+RPLL+Q
Sbjct  1    MLMLCHLRTAFTVITLTGTLLSNVAWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQ  60

Query  61   NWLDTGDDNADPSQIKVPFTATPPVSRVEPKRGQTVKVMYTGATALPKDRESVYWFNVLE  120
             WLDTG+DN++P+ IKVPF ATPPVSR++PK+GQT+K+MYTG+ +LP DRESV+WFNVLE
Sbjct  61   TWLDTGNDNTEPGAIKVPFNATPPVSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLE  120

Query  121  VPPKPKDAE--ADKNLLQLAFRTRIKLFYRPSGLQGEPAEAPAKITWKLNNAQ----LQA  174
            VPPK++  E  A +N LQ AFRTRIKLFYRP GL + ++EAPAK+TW++++ Q    +  
Sbjct  121  VPPKANKNENSAAQNTLQSAFRTRIKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTV  180

Query  175  NNPTPYYVSFNEVKLESGGKTYNVNSSMVTPFSQASFGVTSLPGSVSSGKVVFKAINDFG  234
            NNPTPY+VSFN + LES GK Y V++ M +P++++SF + + + + SSGK+ +  INDFG
Sbjct  181  NNPTPYFVSFNSIELESTGKKYIVDGQMAAPLTETSFTLKT-ATTTSSGKINYSFINDFG  239

Query  235  GNIDGSATF  243
            G I+++A++
Sbjct  240  GIINATASL  248

6) staB in NC_003198


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  252 bits (940),  Expect = 1e-68, Method: Compositional matrix adjust.
 Identities = 135/246 (55%), Positives = 194/246 (79%), Gaps = 2/246 (0%)

Query  1    MLY-VKKSLTAIVLASAVFSTFSYADIIISGTRIVYDENKKDVSIRLENKGTRPLLVQNW  59
            ML  ++ ++T I L+++++S  + ADI+ISGTRIVY   +KDV++RLENKG+RPLLVQ W
Sbjct  3    MLCHLRTAFTVITLTGTLLSNVAWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTW  62

Query  60   IDLGNDNDDPGSIKAPFVSTPPVSRVEPKRGQSVKIMYTQASALPKDRESVFWFNVLEVP  119
            +D GNDN +PG+IK PF +TPPVSR++PK+GQ++KIMYT + +LP DRESVFWFNVLEVP
Sbjct  63   LDTGNDNTEPGAIKVPFNATPPVSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVP  122

Query  120  PKADTSKE-ENKSLLQLAFRTRIKLFYRPTGLKGQPAEAAKQLKWQIASEQGYAVLRADN  178
            PKA+ + +   ++ LQ AFRTRIKLFYRP GL + ++EA+ +L W++  EQG +V+  +N
Sbjct  123  PKANKNENSAAQNTLQSAFRTRIKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNN  182

Query  179  STPYFVSFNDATYTAGGKRYDVEATMVAPFSKSSFTVKGLSGASAGKLEYHAINDFGGLI  238
            +TPYFVSFN     + GK+Y V++ M AP++ +SFT+K  + +S+GK++Y  INDFGG+I
Sbjct  183  PTPYFVSFNSIELESTGKKYIVDGQMAAPLTETSFTLKTATTTSSGKINYSFINDFGGII  242

Query  239  EGSVSL  244
            +++ SL
Sbjct  243  NATASL  248

7) STBHUCCB_2090 in NC_016832


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  252 bits (940),  Expect = 1e-68, Method: Compositional matrix adjust.
 Identities = 135/246 (55%), Positives = 194/246 (79%), Gaps = 2/246 (0%)

Query  1    MLY-VKKSLTAIVLASAVFSTFSYADIIISGTRIVYDENKKDVSIRLENKGTRPLLVQNW  59
            ML  ++ ++T I L+++++S  + ADI+ISGTRIVY   +KDV++RLENKG+RPLLVQ W
Sbjct  3    MLCHLRTAFTVITLTGTLLSNVAWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTW  62

Query  60   IDLGNDNDDPGSIKAPFVSTPPVSRVEPKRGQSVKIMYTQASALPKDRESVFWFNVLEVP  119
            +D GNDN +PG+IK PF +TPPVSR++PK+GQ++KIMYT + +LP DRESVFWFNVLEVP
Sbjct  63   LDTGNDNTEPGAIKVPFNATPPVSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVP  122

Query  120  PKADTSKE-ENKSLLQLAFRTRIKLFYRPTGLKGQPAEAAKQLKWQIASEQGYAVLRADN  178
            PKA+ + +   ++ LQ AFRTRIKLFYRP GL + ++EA+ +L W++  EQG +V+  +N
Sbjct  123  PKANKNENSAAQNTLQSAFRTRIKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNN  182

Query  179  STPYFVSFNDATYTAGGKRYDVEATMVAPFSKSSFTVKGLSGASAGKLEYHAINDFGGLI  238
            +TPYFVSFN     + GK+Y V++ M AP++ +SFT+K  + +S+GK++Y  INDFGG+I
Sbjct  183  PTPYFVSFNSIELESTGKKYIVDGQMAAPLTETSFTLKTATTTSSGKINYSFINDFGGII  242

Query  239  EGSVSL  244
            +++ SL
Sbjct  243  NATASL  248

8) TY21A_00970 in NC_021176


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  252 bits (940),  Expect = 1e-68, Method: Compositional matrix adjust.
 Identities = 135/246 (55%), Positives = 194/246 (79%), Gaps = 2/246 (0%)

Query  1    MLY-VKKSLTAIVLASAVFSTFSYADIIISGTRIVYDENKKDVSIRLENKGTRPLLVQNW  59
            ML  ++ ++T I L+++++S  + ADI+ISGTRIVY   +KDV++RLENKG+RPLLVQ W
Sbjct  3    MLCHLRTAFTVITLTGTLLSNVAWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTW  62

Query  60   IDLGNDNDDPGSIKAPFVSTPPVSRVEPKRGQSVKIMYTQASALPKDRESVFWFNVLEVP  119
            +D GNDN +PG+IK PF +TPPVSR++PK+GQ++KIMYT + +LP DRESVFWFNVLEVP
Sbjct  63   LDTGNDNTEPGAIKVPFNATPPVSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVP  122

Query  120  PKADTSKE-ENKSLLQLAFRTRIKLFYRPTGLKGQPAEAAKQLKWQIASEQGYAVLRADN  178
            PKA+ + +   ++ LQ AFRTRIKLFYRP GL + ++EA+ +L W++  EQG +V+  +N
Sbjct  123  PKANKNENSAAQNTLQSAFRTRIKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNN  182

Query  179  STPYFVSFNDATYTAGGKRYDVEATMVAPFSKSSFTVKGLSGASAGKLEYHAINDFGGLI  238
            +TPYFVSFN     + GK+Y V++ M AP++ +SFT+K  + +S+GK++Y  INDFGG+I
Sbjct  183  PTPYFVSFNSIELESTGKKYIVDGQMAAPLTETSFTLKTATTTSSGKINYSFINDFGGII  242

Query  239  EGSVSL  244
            +++ SL
Sbjct  243  NATASL  248

9) staB in NC_004631


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  252 bits (940),  Expect = 1e-68, Method: Compositional matrix adjust.
 Identities = 135/246 (55%), Positives = 194/246 (79%), Gaps = 2/246 (0%)

Query  1    MLY-VKKSLTAIVLASAVFSTFSYADIIISGTRIVYDENKKDVSIRLENKGTRPLLVQNW  59
            ML  ++ ++T I L+++++S  + ADI+ISGTRIVY   +KDV++RLENKG+RPLLVQ W
Sbjct  3    MLCHLRTAFTVITLTGTLLSNVAWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTW  62

Query  60   IDLGNDNDDPGSIKAPFVSTPPVSRVEPKRGQSVKIMYTQASALPKDRESVFWFNVLEVP  119
            +D GNDN +PG+IK PF +TPPVSR++PK+GQ++KIMYT + +LP DRESVFWFNVLEVP
Sbjct  63   LDTGNDNTEPGAIKVPFNATPPVSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVP  122

Query  120  PKADTSKE-ENKSLLQLAFRTRIKLFYRPTGLKGQPAEAAKQLKWQIASEQGYAVLRADN  178
            PKA+ + +   ++ LQ AFRTRIKLFYRP GL + ++EA+ +L W++  EQG +V+  +N
Sbjct  123  PKANKNENSAAQNTLQSAFRTRIKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNN  182

Query  179  STPYFVSFNDATYTAGGKRYDVEATMVAPFSKSSFTVKGLSGASAGKLEYHAINDFGGLI  238
            +TPYFVSFN     + GK+Y V++ M AP++ +SFT+K  + +S+GK++Y  INDFGG+I
Sbjct  183  PTPYFVSFNSIELESTGKKYIVDGQMAAPLTETSFTLKTATTTSSGKINYSFINDFGGII  242

Query  239  EGSVSL  244
            +++ SL
Sbjct  243  NATASL  248

10) EcolC_3519 in NC_010468


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  251 bits (937),  Expect = 2e-68, Method: Compositional matrix adjust.
 Identities = 140/247 (57%), Positives = 195/247 (79%), Gaps = 7/247 (2%)

Query  1    MFPIIKKTVSALFISTLLTSAPAFADIIISGTRIIYNADKKDVNVRLENKGNRPLLIQNW  60
            M+  ++ + + + ++  L S  A ADI+ISGTRI+Y + +KDVNVRLENKG+RPLL+Q W
Sbjct  3    MLCHLRTAFTVITLTGTLLSNVAWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTW  62

Query  61   LDTGDDNADPSQIKVPFTSTPPVSRIESKRGQTVKVMFTGTTQLPADRESVFWFNVLEVP  120
            LDTG+DN++P+ IKVPF +TPPVSRI++K+GQT+K+M+TG+  LP+DRESVFWFNVLEVP
Sbjct  63   LDTGNDNTEPGAIKVPFNATPPVSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVP  122

Query  121  PKPKDAE--SDKNLLQLAFRTRIKLFYRPSGLKGEPAEAPAKLTWKLNNAQ----LQVNN  174
            PK++  E  + +N LQ AFRTRIKLFYRP GL + ++EAPAKLTW++++ Q    + VNN
Sbjct  123  PKANKNENSAAQNTLQSAFRTRIKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNN  182

Query  175  PTPYYVSFNDVAIESGGKSYKVDSSMVAPFGQVSFAVTDIASSVSSGKVIYKAINDYGGN  234
            PTPY+VSFN + +ES GK Y VD+ M AP+ + SF++   A++ SSGK+ Y  IND+GG 
Sbjct  183  PTPYFVSFNSIELESTGKKYIVDGQMAAPLTETSFTL-KTATTTSSGKINYSFINDFGGI  241

Query  235  IDGSTSL  241
            I++++SL
Sbjct  242  INATASL  248

11) ecpD in NC_013941


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  249 bits (928),  Expect = 1e-67, Method: Compositional matrix adjust.
 Identities = 138/249 (56%), Positives = 195/249 (79%), Gaps = 7/249 (2%)

Query  1    MLMFPLVKKTVSALFVSTLLASAPAFADIIISGTRIIYNADKKDVNVRLENKGNRPLLIQ  60
            MLM+  ++ + + + ++  L S  A ADI+ISGTRI+Y + +KDVNVRLENKG+RPLL+Q
Sbjct  1    MLMLCHLRTAFTVITLTGTLLSNVAWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQ  60

Query  61   NWLDTGDDNADPSQIKVPFTATPPVSRVEPKRGQTVKVMYTGATALPKDRESVYWFNVLE  120
             WLDTG+DN++P+ IKVPF ATPPVSR++PK+GQT+K+MYTG+ +LP DRESV+WFNVLE
Sbjct  61   TWLDTGNDNTEPGAIKVPFNATPPVSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLE  120

Query  121  VPPKPKDAE--ADKNLLQLAFRTRIKLFYRLSGLQGEPAEAPAKITWKLNNAQ----LQA  174
            VPPK++  E  A +N LQ AFRTRIKLFYR  GL + ++EAPAK+TW++++ Q    +  
Sbjct  121  VPPKANKNENSAAQNTLQSAFRTRIKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTV  180

Query  175  NNPTPYYVSFNEVKLESGGKTYNVNSSMVTPFSQASFGVTGLPGSVSSGKVVFKAINDFG  234
            NNPTPY+VSFN + LES GK Y V++ M +P++++SF +   + + SSGK+ +  INDFG
Sbjct  181  NNPTPYFVSFNSIELESTGKKYIVDGQMAAPLTETSFTLKT-ATTTSSGKINYSFINDFG  239

Query  235  GNIDGSATF  243
            G I+++A++
Sbjct  240  GIINATASL  248

12) ECH74115_0149 in NC_011353


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  249 bits (928),  Expect = 9e-68, Method: Compositional matrix adjust.
 Identities = 137/247 (56%), Positives = 195/247 (79%), Gaps = 7/247 (2%)

Query  1    MFPLVKKTVSALFVSTLLASAPAFADIIISGTRIIYNADKKDVNVRLENKGNRPLLIQNW  60
            M+  ++ + + + ++  L S  A ADI+ISGTRI+Y + +KDVNVRLENKG+RPLL+Q W
Sbjct  3    MLCHLRTAFTVITLTGTLLSNVAWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTW  62

Query  61   LDTGDDNADPSQIKVPFTATPPVSRVEPKRGQTVKVMYTGATALPKDRESVYWFNVLEVP  120
            LDTG+DN++P+ IKVPF ATPPVSR++PK+GQT+K+MYTG+ +LP DRESV+WFNVLEVP
Sbjct  63   LDTGNDNTEPGAIKVPFNATPPVSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVP  122

Query  121  PKPKDAE--ADKNLLQLAFRTRIKLFYRPSGLQGEPAEAPAKITWKLNNAQ----LQANN  174
            PK++  E  A +N LQ AFRTRIKLFYRP GL + ++EAPAK+TW++++ Q    +  NN
Sbjct  123  PKANKNENSAAQNTLQSAFRTRIKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNN  182

Query  175  PTPYYVSFNEVKLESGGKTYNVNSSMVTPFSQASFGVTSLPGSVSSGKVVFKAINDFGGN  234
            PTPY+VSFN + LES GK Y V++ M +P++++SF + + + + SSGK+ +  INDFGG 
Sbjct  183  PTPYFVSFNSIELESTGKKYIVDGQMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGI  241

Query  235  IDGSATF  241
            I+++A++
Sbjct  242  INATASL  248

13) ECs0144 in NC_002695


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  249 bits (928),  Expect = 9e-68, Method: Compositional matrix adjust.
 Identities = 137/247 (56%), Positives = 195/247 (79%), Gaps = 7/247 (2%)

Query  1    MFPLVKKTVSALFVSTLLASAPAFADIIISGTRIIYNADKKDVNVRLENKGNRPLLIQNW  60
            M+  ++ + + + ++  L S  A ADI+ISGTRI+Y + +KDVNVRLENKG+RPLL+Q W
Sbjct  3    MLCHLRTAFTVITLTGTLLSNVAWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTW  62

Query  61   LDTGDDNADPSQIKVPFTATPPVSRVEPKRGQTVKVMYTGATALPKDRESVYWFNVLEVP  120
            LDTG+DN++P+ IKVPF ATPPVSR++PK+GQT+K+MYTG+ +LP DRESV+WFNVLEVP
Sbjct  63   LDTGNDNTEPGAIKVPFNATPPVSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVP  122

Query  121  PKPKDAE--ADKNLLQLAFRTRIKLFYRPSGLQGEPAEAPAKITWKLNNAQ----LQANN  174
            PK++  E  A +N LQ AFRTRIKLFYRP GL + ++EAPAK+TW++++ Q    +  NN
Sbjct  123  PKANKNENSAAQNTLQSAFRTRIKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNN  182

Query  175  PTPYYVSFNEVKLESGGKTYNVNSSMVTPFSQASFGVTSLPGSVSSGKVVFKAINDFGGN  234
            PTPY+VSFN + LES GK Y V++ M +P++++SF + + + + SSGK+ +  INDFGG 
Sbjct  183  PTPYFVSFNSIELESTGKKYIVDGQMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGI  241

Query  235  IDGSATF  241
            I+++A++
Sbjct  242  INATASL  248

14) ECSP_0141 in NC_013008


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  249 bits (928),  Expect = 9e-68, Method: Compositional matrix adjust.
 Identities = 137/247 (56%), Positives = 195/247 (79%), Gaps = 7/247 (2%)

Query  1    MFPLVKKTVSALFVSTLLASAPAFADIIISGTRIIYNADKKDVNVRLENKGNRPLLIQNW  60
            M+  ++ + + + ++  L S  A ADI+ISGTRI+Y + +KDVNVRLENKG+RPLL+Q W
Sbjct  3    MLCHLRTAFTVITLTGTLLSNVAWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTW  62

Query  61   LDTGDDNADPSQIKVPFTATPPVSRVEPKRGQTVKVMYTGATALPKDRESVYWFNVLEVP  120
            LDTG+DN++P+ IKVPF ATPPVSR++PK+GQT+K+MYTG+ +LP DRESV+WFNVLEVP
Sbjct  63   LDTGNDNTEPGAIKVPFNATPPVSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVP  122

Query  121  PKPKDAE--ADKNLLQLAFRTRIKLFYRPSGLQGEPAEAPAKITWKLNNAQ----LQANN  174
            PK++  E  A +N LQ AFRTRIKLFYRP GL + ++EAPAK+TW++++ Q    +  NN
Sbjct  123  PKANKNENSAAQNTLQSAFRTRIKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNN  182

Query  175  PTPYYVSFNEVKLESGGKTYNVNSSMVTPFSQASFGVTSLPGSVSSGKVVFKAINDFGGN  234
            PTPY+VSFN + LES GK Y V++ M +P++++SF + + + + SSGK+ +  INDFGG 
Sbjct  183  PTPYFVSFNSIELESTGKKYIVDGQMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGI  241

Query  235  IDGSATF  241
            I+++A++
Sbjct  242  INATASL  248

15) CDCO157_0142 in NC_017906


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  249 bits (928),  Expect = 9e-68, Method: Compositional matrix adjust.
 Identities = 137/247 (56%), Positives = 195/247 (79%), Gaps = 7/247 (2%)

Query  1    MFPLVKKTVSALFVSTLLASAPAFADIIISGTRIIYNADKKDVNVRLENKGNRPLLIQNW  60
            M+  ++ + + + ++  L S  A ADI+ISGTRI+Y + +KDVNVRLENKG+RPLL+Q W
Sbjct  3    MLCHLRTAFTVITLTGTLLSNVAWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTW  62

Query  61   LDTGDDNADPSQIKVPFTATPPVSRVEPKRGQTVKVMYTGATALPKDRESVYWFNVLEVP  120
            LDTG+DN++P+ IKVPF ATPPVSR++PK+GQT+K+MYTG+ +LP DRESV+WFNVLEVP
Sbjct  63   LDTGNDNTEPGAIKVPFNATPPVSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVP  122

Query  121  PKPKDAE--ADKNLLQLAFRTRIKLFYRPSGLQGEPAEAPAKITWKLNNAQ----LQANN  174
            PK++  E  A +N LQ AFRTRIKLFYRP GL + ++EAPAK+TW++++ Q    +  NN
Sbjct  123  PKANKNENSAAQNTLQSAFRTRIKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNN  182

Query  175  PTPYYVSFNEVKLESGGKTYNVNSSMVTPFSQASFGVTSLPGSVSSGKVVFKAINDFGGN  234
            PTPY+VSFN + LES GK Y V++ M +P++++SF + + + + SSGK+ +  INDFGG 
Sbjct  183  PTPYFVSFNSIELESTGKKYIVDGQMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGI  241

Query  235  IDGSATF  241
            I+++A++
Sbjct  242  INATASL  248

16) ECO55CA74_00690 in NC_017656


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  245 bits (913),  Expect = 2e-66, Method: Compositional matrix adjust.
 Identities = 136/247 (56%), Positives = 193/247 (79%), Gaps = 7/247 (2%)

Query  1    MFPLVKKTVSALFVSTLLASAPAFADIIISGTRIIYNADKKDVNVRLENKGNRPLLIQNW  60
            M+  ++ + + + ++  L S  A ADI+ISGTRI+Y + +KDVNVRLENKG+RPLL+Q W
Sbjct  3    MLCHLRTAFTVITLTGTLLSNVAWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTW  62

Query  61   LDTGDDNADPSQIKVPFTATPPVSRVEPKRGQTVKVMYTGATALPKDRESVYWFNVLEVP  120
            LDTG+DN++P+ IKVPF ATPPVSR++PK+GQT+K+MYTG+ +LP DRESV+WFNVLEVP
Sbjct  63   LDTGNDNTEPGAIKVPFNATPPVSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVP  122

Query  121  PKPKDAE--ADKNLLQLAFRTRIKLFYRLSGLQGEPAEAPAKITWKLNNAQ----LQANN  174
            PK++  E  A +N LQ AFRTRIKLFYR  GL + ++EAPAK+TW++++ Q    +  NN
Sbjct  123  PKANKNENSAAQNTLQSAFRTRIKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNN  182

Query  175  PTPYYVSFNEVKLESGGKTYNVNSSMVTPFSQASFGVTGLPGSVSSGKVVFKAINDFGGN  234
            PTPY+VSFN + LES GK Y V++ M +P++++SF +   + + SSGK+ +  INDFGG 
Sbjct  183  PTPYFVSFNSIELESTGKKYIVDGQMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGI  241

Query  235  IDGSATF  241
            I+++A++
Sbjct  242  INATASL  248

17) EcSMS35_0151 in NC_010498


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  244 bits (910),  Expect = 3e-66, Method: Compositional matrix adjust.
 Identities = 136/223 (61%), Positives = 179/223 (81%), Gaps = 2/223 (0%)

Query  25   ADIVISGTRVIYKSNEKSVNVRLENKGNNPLLVQSWLDTGDDSAEPGSITVPFTATPPVS  84
            ADIVISGTR++Y++ +K VNVRLENKG+ PLLVQ+WLDTG+D++EPG+I VPF ATPPVS
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  85   RIDAKRGQTIKLMYTASSPLPKDRESVFWFNVLEVPPKPD-ADKVANQSLLQLAFRTRIK  143
            RID+K+GQTIK+MYT+S  LP DRESVFWFNVLEVPPK++  ++ A Q+ LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  144  LFYRPEGLNGLPSDAPAALKWSWATSAGKTALRVANPTPYHVSFSSGDLVANGKTYPLDV  203
            LFYRP+GL +L+++APA L W      GK+ + V NPTPY VSF+S +L + GK Y +D 
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  204  KMVAPLSEETFDIKGMSGKASSAKVHFFAINDFGGAIEGNASL  246
            +M APL+E +F +K  +  +SS+K+++  INDFGG I++ ASL
Sbjct  207  QMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

18) ECP_0150 in NC_008253


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  241 bits (901),  Expect = 2e-65, Method: Compositional matrix adjust.
 Identities = 134/223 (61%), Positives = 184/223 (83%), Gaps = 2/223 (0%)

Query  25   ADIVISGTRVVYKSEQKNVNVRLENKGNNPLLVQSWLDTGDDNAEPGSITVPFTATPPVS  84
            ADIVISGTR+VY++ QK+VNVRLENKG+ PLLVQ+WLDTG+DN+EPG+I VPF ATPPVS
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  85   RIDAKRGQTIKLMYTASSALPKDRESVFWFNVLEVPPKPD-AAKAANQSLLQLAFRTRIK  143
            RID+K+GQTIK+MYT+S +LP DRESVFWFNVLEVPPK++   ++A Q+ LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  144  LFYRPEGLSGISSDAPLALKWSWATSEGKAALRVDNPTPYYVSFSSGDLEANGKRYPLDM  203
            LFYRP+GL++++++AP  L W     +GK+ + V+NPTPY+VSF+S +LE+ GK+Y +D 
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  204  TMIAPFSNDVIKVNGMSGRTSSAKVHFFAINDFGGSIEGNANL  246
             M AP+++  + ++  +  TSS+K+++  INDFGG I++ A+L
Sbjct  207  QMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

19) ecpD in NC_017631


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  241 bits (898),  Expect = 2e-65, Method: Compositional matrix adjust.
 Identities = 134/223 (61%), Positives = 183/223 (83%), Gaps = 2/223 (0%)

Query  25   ADIVISGTRVVYKSEQKSVNVRLENKGNNPLLVQSWLDTGDDNAEPGSITVPFTATPPVS  84
            ADIVISGTR+VY++ QK VNVRLENKG+ PLLVQ+WLDTG+DN+EPG+I VPF ATPPVS
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  85   RIDAKRGQTIKLMYTASSALPKDRESVFWFNVLEVPPKPD-AAKAANQSLLQLAFRTRIK  143
            RID+K+GQTIK+MYT+S +LP DRESVFWFNVLEVPPK++   ++A Q+ LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  144  LFYRPEGLSGISSDAPLALKWSWATSEGKAALRVDNPTPYYVSFSSGDLEANGKRYPLDM  203
            LFYRP+GL++++++AP  L W     +GK+ + V+NPTPY+VSF+S +LE+ GK+Y +D 
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  204  TMIAPFSNDVIKVNGMSGRTSSAKVHFFAINDFGGSIEGNANL  246
             M AP+++  + ++  +  TSS+K+++  INDFGG I++ A+L
Sbjct  207  QMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

20) ecpD in NC_008563


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  241 bits (898),  Expect = 2e-65, Method: Compositional matrix adjust.
 Identities = 134/223 (61%), Positives = 183/223 (83%), Gaps = 2/223 (0%)

Query  25   ADIVISGTRVVYKSEQKSVNVRLENKGNNPLLVQSWLDTGDDNAEPGSITVPFTATPPVS  84
            ADIVISGTR+VY++ QK VNVRLENKG+ PLLVQ+WLDTG+DN+EPG+I VPF ATPPVS
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  85   RIDAKRGQTIKLMYTASSALPKDRESVFWFNVLEVPPKPD-AAKAANQSLLQLAFRTRIK  143
            RID+K+GQTIK+MYT+S +LP DRESVFWFNVLEVPPK++   ++A Q+ LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  144  LFYRPEGLSGISSDAPLALKWSWATSEGKAALRVDNPTPYYVSFSSGDLEANGKRYPLDM  203
            LFYRP+GL++++++AP  L W     +GK+ + V+NPTPY+VSF+S +LE+ GK+Y +D 
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  204  TMIAPFSNDVIKVNGMSGRTSSAKVHFFAINDFGGSIEGNANL  246
             M AP+++  + ++  +  TSS+K+++  INDFGG I++ A+L
Sbjct  207  QMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

21) ecpD in NC_004431


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  241 bits (898),  Expect = 2e-65, Method: Compositional matrix adjust.
 Identities = 134/223 (61%), Positives = 183/223 (83%), Gaps = 2/223 (0%)

Query  25   ADIVISGTRVVYKSEQKSVNVRLENKGNNPLLVQSWLDTGDDNAEPGSITVPFTATPPVS  84
            ADIVISGTR+VY++ QK VNVRLENKG+ PLLVQ+WLDTG+DN+EPG+I VPF ATPPVS
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  85   RIDAKRGQTIKLMYTASSALPKDRESVFWFNVLEVPPKPD-AAKAANQSLLQLAFRTRIK  143
            RID+K+GQTIK+MYT+S +LP DRESVFWFNVLEVPPK++   ++A Q+ LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  144  LFYRPEGLSGISSDAPLALKWSWATSEGKAALRVDNPTPYYVSFSSGDLEANGKRYPLDM  203
            LFYRP+GL++++++AP  L W     +GK+ + V+NPTPY+VSF+S +LE+ GK+Y +D 
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  204  TMIAPFSNDVIKVNGMSGRTSSAKVHFFAINDFGGSIEGNANL  246
             M AP+++  + ++  +  TSS+K+++  INDFGG I++ A+L
Sbjct  207  QMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

22) ecpD in NC_017652


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  241 bits (898),  Expect = 2e-65, Method: Compositional matrix adjust.
 Identities = 134/223 (61%), Positives = 183/223 (83%), Gaps = 2/223 (0%)

Query  25   ADIVISGTRVVYKSEQKSVNVRLENKGNNPLLVQSWLDTGDDNAEPGSITVPFTATPPVS  84
            ADIVISGTR+VY++ QK VNVRLENKG+ PLLVQ+WLDTG+DN+EPG+I VPF ATPPVS
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  85   RIDAKRGQTIKLMYTASSALPKDRESVFWFNVLEVPPKPD-AAKAANQSLLQLAFRTRIK  143
            RID+K+GQTIK+MYT+S +LP DRESVFWFNVLEVPPK++   ++A Q+ LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  144  LFYRPEGLSGISSDAPLALKWSWATSEGKAALRVDNPTPYYVSFSSGDLEANGKRYPLDM  203
            LFYRP+GL++++++AP  L W     +GK+ + V+NPTPY+VSF+S +LE+ GK+Y +D 
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  204  TMIAPFSNDVIKVNGMSGRTSSAKVHFFAINDFGGSIEGNANL  246
             M AP+++  + ++  +  TSS+K+++  INDFGG I++ A+L
Sbjct  207  QMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

23) ecpD in NC_017651


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  241 bits (898),  Expect = 2e-65, Method: Compositional matrix adjust.
 Identities = 134/223 (61%), Positives = 183/223 (83%), Gaps = 2/223 (0%)

Query  25   ADIVISGTRVVYKSEQKSVNVRLENKGNNPLLVQSWLDTGDDNAEPGSITVPFTATPPVS  84
            ADIVISGTR+VY++ QK VNVRLENKG+ PLLVQ+WLDTG+DN+EPG+I VPF ATPPVS
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  85   RIDAKRGQTIKLMYTASSALPKDRESVFWFNVLEVPPKPD-AAKAANQSLLQLAFRTRIK  143
            RID+K+GQTIK+MYT+S +LP DRESVFWFNVLEVPPK++   ++A Q+ LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  144  LFYRPEGLSGISSDAPLALKWSWATSEGKAALRVDNPTPYYVSFSSGDLEANGKRYPLDM  203
            LFYRP+GL++++++AP  L W     +GK+ + V+NPTPY+VSF+S +LE+ GK+Y +D 
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  204  TMIAPFSNDVIKVNGMSGRTSSAKVHFFAINDFGGSIEGNANL  246
             M AP+++  + ++  +  TSS+K+++  INDFGG I++ A+L
Sbjct  207  QMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

24) ecpD in NC_011745


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  241 bits (898),  Expect = 2e-65, Method: Compositional matrix adjust.
 Identities = 134/223 (61%), Positives = 183/223 (83%), Gaps = 2/223 (0%)

Query  25   ADIVISGTRVVYKSEQKSVNVRLENKGNNPLLVQSWLDTGDDNAEPGSITVPFTATPPVS  84
            ADIVISGTR+VY++ QK VNVRLENKG+ PLLVQ+WLDTG+DN+EPG+I VPF ATPPVS
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  85   RIDAKRGQTIKLMYTASSALPKDRESVFWFNVLEVPPKPD-AAKAANQSLLQLAFRTRIK  143
            RID+K+GQTIK+MYT+S +LP DRESVFWFNVLEVPPK++   ++A Q+ LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  144  LFYRPEGLSGISSDAPLALKWSWATSEGKAALRVDNPTPYYVSFSSGDLEANGKRYPLDM  203
            LFYRP+GL++++++AP  L W     +GK+ + V+NPTPY+VSF+S +LE+ GK+Y +D 
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  204  TMIAPFSNDVIKVNGMSGRTSSAKVHFFAINDFGGSIEGNANL  246
             M AP+++  + ++  +  TSS+K+++  INDFGG I++ A+L
Sbjct  207  QMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

25) ECOK1_0142 in NC_017628


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  241 bits (898),  Expect = 2e-65, Method: Compositional matrix adjust.
 Identities = 134/223 (61%), Positives = 183/223 (83%), Gaps = 2/223 (0%)

Query  25   ADIVISGTRVVYKSEQKSVNVRLENKGNNPLLVQSWLDTGDDNAEPGSITVPFTATPPVS  84
            ADIVISGTR+VY++ QK VNVRLENKG+ PLLVQ+WLDTG+DN+EPG+I VPF ATPPVS
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  85   RIDAKRGQTIKLMYTASSALPKDRESVFWFNVLEVPPKPD-AAKAANQSLLQLAFRTRIK  143
            RID+K+GQTIK+MYT+S +LP DRESVFWFNVLEVPPK++   ++A Q+ LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  144  LFYRPEGLSGISSDAPLALKWSWATSEGKAALRVDNPTPYYVSFSSGDLEANGKRYPLDM  203
            LFYRP+GL++++++AP  L W     +GK+ + V+NPTPY+VSF+S +LE+ GK+Y +D 
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  204  TMIAPFSNDVIKVNGMSGRTSSAKVHFFAINDFGGSIEGNANL  246
             M AP+++  + ++  +  TSS+K+++  INDFGG I++ A+L
Sbjct  207  QMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

26) ecpD in NC_011993


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  241 bits (898),  Expect = 2e-65, Method: Compositional matrix adjust.
 Identities = 134/223 (61%), Positives = 183/223 (83%), Gaps = 2/223 (0%)

Query  25   ADIVISGTRVVYKSEQKSVNVRLENKGNNPLLVQSWLDTGDDNAEPGSITVPFTATPPVS  84
            ADIVISGTR+VY++ QK VNVRLENKG+ PLLVQ+WLDTG+DN+EPG+I VPF ATPPVS
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  85   RIDAKRGQTIKLMYTASSALPKDRESVFWFNVLEVPPKPD-AAKAANQSLLQLAFRTRIK  143
            RID+K+GQTIK+MYT+S +LP DRESVFWFNVLEVPPK++   ++A Q+ LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  144  LFYRPEGLSGISSDAPLALKWSWATSEGKAALRVDNPTPYYVSFSSGDLEANGKRYPLDM  203
            LFYRP+GL++++++AP  L W     +GK+ + V+NPTPY+VSF+S +LE+ GK+Y +D 
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  204  TMIAPFSNDVIKVNGMSGRTSSAKVHFFAINDFGGSIEGNANL  246
             M AP+++  + ++  +  TSS+K+++  INDFGG I++ A+L
Sbjct  207  QMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

27) NRG857_00725 in NC_017634


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  241 bits (898),  Expect = 2e-65, Method: Compositional matrix adjust.
 Identities = 134/223 (61%), Positives = 183/223 (83%), Gaps = 2/223 (0%)

Query  25   ADIVISGTRVVYKSEQKSVNVRLENKGNNPLLVQSWLDTGDDNAEPGSITVPFTATPPVS  84
            ADIVISGTR+VY++ QK VNVRLENKG+ PLLVQ+WLDTG+DN+EPG+I VPF ATPPVS
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  85   RIDAKRGQTIKLMYTASSALPKDRESVFWFNVLEVPPKPD-AAKAANQSLLQLAFRTRIK  143
            RID+K+GQTIK+MYT+S +LP DRESVFWFNVLEVPPK++   ++A Q+ LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  144  LFYRPEGLSGISSDAPLALKWSWATSEGKAALRVDNPTPYYVSFSSGDLEANGKRYPLDM  203
            LFYRP+GL++++++AP  L W     +GK+ + V+NPTPY+VSF+S +LE+ GK+Y +D 
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  204  TMIAPFSNDVIKVNGMSGRTSSAKVHFFAINDFGGSIEGNANL  246
             M AP+++  + ++  +  TSS+K+++  INDFGG I++ A+L
Sbjct  207  QMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

28) focC_1 in NC_022370


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  241 bits (898),  Expect = 2e-65, Method: Compositional matrix adjust.
 Identities = 134/223 (61%), Positives = 183/223 (83%), Gaps = 2/223 (0%)

Query  25   ADIVISGTRVVYKSEQKSVNVRLENKGNNPLLVQSWLDTGDDNAEPGSITVPFTATPPVS  84
            ADIVISGTR+VY++ QK VNVRLENKG+ PLLVQ+WLDTG+DN+EPG+I VPF ATPPVS
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  85   RIDAKRGQTIKLMYTASSALPKDRESVFWFNVLEVPPKPD-AAKAANQSLLQLAFRTRIK  143
            RID+K+GQTIK+MYT+S +LP DRESVFWFNVLEVPPK++   ++A Q+ LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  144  LFYRPEGLSGISSDAPLALKWSWATSEGKAALRVDNPTPYYVSFSSGDLEANGKRYPLDM  203
            LFYRP+GL++++++AP  L W     +GK+ + V+NPTPY+VSF+S +LE+ GK+Y +D 
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  204  TMIAPFSNDVIKVNGMSGRTSSAKVHFFAINDFGGSIEGNANL  246
             M AP+++  + ++  +  TSS+K+++  INDFGG I++ A+L
Sbjct  207  QMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

29) ecpD in NC_011742


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  241 bits (898),  Expect = 2e-65, Method: Compositional matrix adjust.
 Identities = 134/223 (61%), Positives = 183/223 (83%), Gaps = 2/223 (0%)

Query  25   ADIVISGTRVVYKSEQKSVNVRLENKGNNPLLVQSWLDTGDDNAEPGSITVPFTATPPVS  84
            ADIVISGTR+VY++ QK VNVRLENKG+ PLLVQ+WLDTG+DN+EPG+I VPF ATPPVS
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  85   RIDAKRGQTIKLMYTASSALPKDRESVFWFNVLEVPPKPD-AAKAANQSLLQLAFRTRIK  143
            RID+K+GQTIK+MYT+S +LP DRESVFWFNVLEVPPK++   ++A Q+ LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  144  LFYRPEGLSGISSDAPLALKWSWATSEGKAALRVDNPTPYYVSFSSGDLEANGKRYPLDM  203
            LFYRP+GL++++++AP  L W     +GK+ + V+NPTPY+VSF+S +LE+ GK+Y +D 
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  204  TMIAPFSNDVIKVNGMSGRTSSAKVHFFAINDFGGSIEGNANL  246
             M AP+++  + ++  +  TSS+K+++  INDFGG I++ A+L
Sbjct  207  QMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

30) UM146_23505 in NC_017632


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  241 bits (898),  Expect = 2e-65, Method: Compositional matrix adjust.
 Identities = 134/223 (61%), Positives = 183/223 (83%), Gaps = 2/223 (0%)

Query  25   ADIVISGTRVVYKSEQKSVNVRLENKGNNPLLVQSWLDTGDDNAEPGSITVPFTATPPVS  84
            ADIVISGTR+VY++ QK VNVRLENKG+ PLLVQ+WLDTG+DN+EPG+I VPF ATPPVS
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  85   RIDAKRGQTIKLMYTASSALPKDRESVFWFNVLEVPPKPD-AAKAANQSLLQLAFRTRIK  143
            RID+K+GQTIK+MYT+S +LP DRESVFWFNVLEVPPK++   ++A Q+ LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  144  LFYRPEGLSGISSDAPLALKWSWATSEGKAALRVDNPTPYYVSFSSGDLEANGKRYPLDM  203
            LFYRP+GL++++++AP  L W     +GK+ + V+NPTPY+VSF+S +LE+ GK+Y +D 
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  204  TMIAPFSNDVIKVNGMSGRTSSAKVHFFAINDFGGSIEGNANL  246
             M AP+++  + ++  +  TSS+K+++  INDFGG I++ A+L
Sbjct  207  QMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

31) ecpD in NC_007946


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  241 bits (898),  Expect = 2e-65, Method: Compositional matrix adjust.
 Identities = 134/223 (61%), Positives = 183/223 (83%), Gaps = 2/223 (0%)

Query  25   ADIVISGTRVVYKSEQKSVNVRLENKGNNPLLVQSWLDTGDDNAEPGSITVPFTATPPVS  84
            ADIVISGTR+VY++ QK VNVRLENKG+ PLLVQ+WLDTG+DN+EPG+I VPF ATPPVS
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  85   RIDAKRGQTIKLMYTASSALPKDRESVFWFNVLEVPPKPD-AAKAANQSLLQLAFRTRIK  143
            RID+K+GQTIK+MYT+S +LP DRESVFWFNVLEVPPK++   ++A Q+ LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  144  LFYRPEGLSGISSDAPLALKWSWATSEGKAALRVDNPTPYYVSFSSGDLEANGKRYPLDM  203
            LFYRP+GL++++++AP  L W     +GK+ + V+NPTPY+VSF+S +LE+ GK+Y +D 
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  204  TMIAPFSNDVIKVNGMSGRTSSAKVHFFAINDFGGSIEGNANL  246
             M AP+++  + ++  +  TSS+K+++  INDFGG I++ A+L
Sbjct  207  QMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

32) A464_187 in NC_021870


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  237 bits (883),  Expect = 4e-64, Method: Compositional matrix adjust.
 Identities = 132/244 (55%), Positives = 185/244 (76%), Gaps = 3/244 (1%)

Query  5    FRSLFLTLSVIATLSVIQPAMADIVLSGTRIVYKEAQKDTSIRLENKGSRPALVQNWLDD  64
            +R+ F  +++ +TL + + A ADIV+SGTRIVY+ AQKD ++RLENKGSRP LVQ WLD 
Sbjct  7    LRTAFTVITLTGTL-LSNVAWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDT  65

Query  65   GDPNADPSTINVPFNATPPVSRIEAGRGQTVKLTYTGARVLPKDRESIYWFNVLEVPPKM  124
            G+ N++P++I+VPFNATPPVSRI++ +GQT+K+ YTG++ LP DRES++WFNVLEVPPK 
Sbjct  66   GNDNTEPGAIKVPFNATPPVSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKA  125

Query  125  -KDADVKEKNILQLAFRTRIKMFYRPEGLDGTPSEAPKKLKWSMQQKSGKAVVHVINPTG  183
             K+ +   +N LQ AFRTRIK+FYRP+GL++ ++EAP KL W M++  GK+VV V NPT 
Sbjct  126  NKNENSAAQNTLQSAFRTRIKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTP  185

Query  184  YFVSFNKVEVTVGGRKHDVNSSMVAPKGETDFIISGLTSAPAKASIHYIAINDFGGAING  243
            YFVSFN +E+   G+K  V++ M AP  ET F +   +++ + + I+Y  INDFGG IN+
Sbjct  186  YFVSFNSIELESTGKKYIVDGQMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINA  244

Query  244  KVDI  247
               +
Sbjct  245  TASL  248

33) sbaC in NC_015761


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  236 bits (881),  Expect = 6e-64, Method: Compositional matrix adjust.
 Identities = 133/244 (55%), Positives = 184/244 (76%), Gaps = 3/244 (1%)

Query  5    FRSLFLTLSVIVTLSVIQPAMADIVLSGTRIVYKEAQKDTSIRLENKGSRPALVQNWLDD  64
            +R+ F  +++  TL + + A ADIV+SGTRIVY+ AQKD ++RLENKGSRP LVQ WLD 
Sbjct  7    LRTAFTVITLTGTL-LSNVAWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDT  65

Query  65   GDPNADPSTINVPFNATPPVSRIEAGRGQTVKLTYTGARVLPKDRESIYWFNVLEVPPKM  124
            G+ N++P++I+VPFNATPPVSRI++ +GQT+K+ YTG++ LP DRES++WFNVLEVPPK 
Sbjct  66   GNDNTEPGAIKVPFNATPPVSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKA  125

Query  125  -KDADVKEKNILQLAFRTRIKMFYRPEGLDGTASEAPKKLKWSMQQKSGKAVVHVINPTG  183
             K+ +   +N LQ AFRTRIK+FYRP+GL++ A+EAP KL W M++  GK+VV V NPT 
Sbjct  126  NKNENSAAQNTLQSAFRTRIKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTP  185

Query  184  YFVSFNKVEVTVGGRKHDVNSSMVAPKGETDFIISGLTSAPAKASIHYIAINDFGGAING  243
            YFVSFN +E+   G+K  V++ M AP  ET F +   +++ + + I+Y  INDFGG IN+
Sbjct  186  YFVSFNSIELESTGKKYIVDGQMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINA  244

Query  244  KVDI  247
               +
Sbjct  245  TASL  248

34) ecpD in NC_007613


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  236 bits (879),  Expect = 9e-64, Method: Compositional matrix adjust.
 Identities = 135/223 (61%), Positives = 179/223 (81%), Gaps = 2/223 (0%)

Query  25   ADIVISGTRVIYKSDQKSVNVRLENKGNNPLLVQSWLDTGDDNAEPGSITVPFTATPPVS  84
            ADIVISGTR++Y++ QK VNVRLENKG+ PLLVQ+WLDTG+DN+EPG+I VPF ATPPVS
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  85   RIDAKRGQTIKLMYTASTSLPKDRESVFWFNVLEVPPKPD-AEKVANQSLLQLAFRTRIK  143
            RID+K+GQTIK+MYT+S +LP DRESVFWFNVLEVPPK++  E+ A Q+ LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  144  LFYRPDGLKGNPSEAPLALKWFWSGSEGKASLRVTNPTPYYVSFSSGDLEASGKRYPIDV  203
            LFYRP+GL + ++EAP  L W     +GK+ + V NPTPY+VSF+S +LE++GK+Y +D 
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  204  KMIAPFSDEVMKVTGLNGKASSAKVHFYAINDFGGTIEGNASL  246
            +M AP+++    +      +SS+K+++  INDFGG I++ ASL
Sbjct  207  QMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

35) EcE24377A_0143 in NC_009801


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  235 bits (878),  Expect = 1e-63, Method: Compositional matrix adjust.
 Identities = 135/223 (61%), Positives = 179/223 (81%), Gaps = 2/223 (0%)

Query  25   ADIVISGTRVIYKSDQKSVNVRLENKGNNPLLVQSWLDTGDDNAEPGSITVPFTATPPVS  84
            ADIVISGTR++Y++ QK VNVRLENKG+ PLLVQ+WLDTG+DN+EPG+I VPF ATPPVS
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  85   RIDAKRGQTIKLMYTASTSLPKDRESVFWFNVLEVPPKPD-AEKVANQSLLQLAFRTRIK  143
            RID+K+GQTIK+MYT+S +LP DRESVFWFNVLEVPPK++  E+ A Q+ LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  144  LFYRPDGLKGNPSEAPLALKWFWSGSEGKASLRVTNPTPYYVSFSSGDLEASGKRYPIDV  203
            LFYRP+GL + ++EAP  L W     +GK+ + V NPTPY+VSF+S +LE++GK+Y +D 
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  204  KMIAPFSDEVMKVTGLNGKASSAKVHFYAINDFGGAIEGNASL  246
            +M AP+++    +      +SS+K+++  INDFGG I++ ASL
Sbjct  207  QMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

36) EcHS_A0143 in NC_009800


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  235 bits (878),  Expect = 1e-63, Method: Compositional matrix adjust.
 Identities = 135/223 (61%), Positives = 179/223 (81%), Gaps = 2/223 (0%)

Query  25   ADIVISGTRVIYKSDQKSVNVRLENKGNNPLLVQSWLDTGDDNAEPGSITVPFTATPPVS  84
            ADIVISGTR++Y++ QK VNVRLENKG+ PLLVQ+WLDTG+DN+EPG+I VPF ATPPVS
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  85   RIDAKRGQTIKLMYTASTSLPKDRESVFWFNVLEVPPKPD-AEKVANQSLLQLAFRTRIK  143
            RID+K+GQTIK+MYT+S +LP DRESVFWFNVLEVPPK++  E+ A Q+ LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  144  LFYRPDGLKGNPSEAPLALKWFWSGSEGKASLRVTNPTPYYVSFSSGDLEASGKRYPIDV  203
            LFYRP+GL + ++EAP  L W     +GK+ + V NPTPY+VSF+S +LE++GK+Y +D 
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  204  KMIAPFSDEVMKVTGLNGKASSAKVHFYAINDFGGAIEGNASL  246
            +M AP+++    +      +SS+K+++  INDFGG I++ ASL
Sbjct  207  QMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

37) ecpD in NC_011741


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  235 bits (878),  Expect = 1e-63, Method: Compositional matrix adjust.
 Identities = 135/223 (61%), Positives = 179/223 (81%), Gaps = 2/223 (0%)

Query  25   ADIVISGTRVIYKSDQKSVNVRLENKGNNPLLVQSWLDTGDDNAEPGSITVPFTATPPVS  84
            ADIVISGTR++Y++ QK VNVRLENKG+ PLLVQ+WLDTG+DN+EPG+I VPF ATPPVS
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  85   RIDAKRGQTIKLMYTASTSLPKDRESVFWFNVLEVPPKPD-AEKVANQSLLQLAFRTRIK  143
            RID+K+GQTIK+MYT+S +LP DRESVFWFNVLEVPPK++  E+ A Q+ LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  144  LFYRPDGLKGNPSEAPLALKWFWSGSEGKASLRVTNPTPYYVSFSSGDLEASGKRYPIDV  203
            LFYRP+GL + ++EAP  L W     +GK+ + V NPTPY+VSF+S +LE++GK+Y +D 
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  204  KMIAPFSDEVMKVTGLNGKASSAKVHFYAINDFGGAIEGNASL  246
            +M AP+++    +      +SS+K+++  INDFGG I++ ASL
Sbjct  207  QMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

38) SSON53_00815 in NC_016822


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  235 bits (876),  Expect = 1e-63, Method: Compositional matrix adjust.
 Identities = 134/223 (61%), Positives = 179/223 (81%), Gaps = 2/223 (0%)

Query  25   ADIVISGTRVIYKSDQKSVNVRLENKGNNPLLVQSWLDTGDNNAEPGSITVPFTATPPVS  84
            ADIVISGTR++Y++ QK VNVRLENKG+ PLLVQ+WLDTG++N+EPG+I VPF ATPPVS
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  85   RIDAKRGQTIKLMYTASTSLPKDRESVFWFNVLEVPPKPD-AEKVANQSLLQLAFRTRIK  143
            RID+K+GQTIK+MYT+S +LP DRESVFWFNVLEVPPK++  E+ A Q+ LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  144  LFYRPDGLKGNPSEAPLALKWFWSGSEGKASLRVTNPTPYYVSFSSGDLEASGKRYPIDV  203
            LFYRP+GL + ++EAP  L W     +GK+ + V NPTPY+VSF+S +LE++GK+Y +D 
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  204  KMIAPFSDEVMKVTGLNGKASSAKVHFYAINDFGGAIEGNASL  246
            +M AP+++    +      +SS+K+++  INDFGG I++ ASL
Sbjct  207  QMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

39) ecpD in NC_007384


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  235 bits (876),  Expect = 1e-63, Method: Compositional matrix adjust.
 Identities = 134/223 (61%), Positives = 179/223 (81%), Gaps = 2/223 (0%)

Query  25   ADIVISGTRVIYKSDQKSVNVRLENKGNNPLLVQSWLDTGDNNAEPGSITVPFTATPPVS  84
            ADIVISGTR++Y++ QK VNVRLENKG+ PLLVQ+WLDTG++N+EPG+I VPF ATPPVS
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  85   RIDAKRGQTIKLMYTASTSLPKDRESVFWFNVLEVPPKPD-AEKVANQSLLQLAFRTRIK  143
            RID+K+GQTIK+MYT+S +LP DRESVFWFNVLEVPPK++  E+ A Q+ LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  144  LFYRPDGLKGNPSEAPLALKWFWSGSEGKASLRVTNPTPYYVSFSSGDLEASGKRYPIDV  203
            LFYRP+GL + ++EAP  L W     +GK+ + V NPTPY+VSF+S +LE++GK+Y +D 
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  204  KMIAPFSDEVMKVTGLNGKASSAKVHFYAINDFGGAIEGNASL  246
            +M AP+++    +      +SS+K+++  INDFGG I++ ASL
Sbjct  207  QMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

40) ecpD in NC_012759


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  235 bits (875),  Expect = 2e-63, Method: Compositional matrix adjust.
 Identities = 133/223 (60%), Positives = 179/223 (81%), Gaps = 2/223 (0%)

Query  25   ADIVISGTRVIYKSDQKSVNVRLENKGNNPLLVQSWLDTGDDNAEPGSITVPFTATPPVS  84
            ADIVISGTR++Y++ QK VNVRLENKG+ PLLVQ+WLDTG+DN+EPG+I VPF ATPPVS
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  85   RIDAKRGQTIKLMYTASTSLPKDRESVFWFNVLEVPPKPD-AEKVANQSLLQLAFRTRIK  143
            RID+K+GQTIK+MYT+S +LP DRESVFWFNVLEVPPK++  E+ A Q+ LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  144  LFYRPDGLKGNPSEAPLALKWFWSGSEGKASLRVTNPTPYYVSFSSGDLEASGKRYPIDV  203
            LFYRP+GL + ++EAP  L W     +GK+ + V NPTPY+VSF+S +LE++GK+Y +D 
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  204  KMIAPFSDEVMKVNGLNGKANSAKVHFYAINDFGGAIEGNARL  246
            +M AP+++    ++     ++S+K+++  INDFGG I++ A L
Sbjct  207  QMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

41) ETEC_0136 in NC_017633


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  235 bits (875),  Expect = 2e-63, Method: Compositional matrix adjust.
 Identities = 133/223 (60%), Positives = 179/223 (81%), Gaps = 2/223 (0%)

Query  25   ADIVISGTRVIYKSDQKSVNVRLENKGNNPLLVQSWLDTGDDNAEPGSITVPFTATPPVS  84
            ADIVISGTR++Y++ QK VNVRLENKG+ PLLVQ+WLDTG+DN+EPG+I VPF ATPPVS
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  85   RIDAKRGQTIKLMYTASTSLPKDRESVFWFNVLEVPPKPD-AEKVANQSLLQLAFRTRIK  143
            RID+K+GQTIK+MYT+S +LP DRESVFWFNVLEVPPK++  E+ A Q+ LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  144  LFYRPDGLKGNPSEAPLALKWFWSGSEGKASLRVTNPTPYYVSFSSGDLEASGKRYPIDV  203
            LFYRP+GL + ++EAP  L W     +GK+ + V NPTPY+VSF+S +LE++GK+Y +D 
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  204  KMIAPFSDEVMKVNGLNGKANSAKVHFYAINDFGGAIEGNARL  246
            +M AP+++    ++     ++S+K+++  INDFGG I++ A L
Sbjct  207  QMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

42) ecpD in NC_010473


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  235 bits (875),  Expect = 2e-63, Method: Compositional matrix adjust.
 Identities = 133/223 (60%), Positives = 179/223 (81%), Gaps = 2/223 (0%)

Query  25   ADIVISGTRVIYKSDQKSVNVRLENKGNNPLLVQSWLDTGDDNAEPGSITVPFTATPPVS  84
            ADIVISGTR++Y++ QK VNVRLENKG+ PLLVQ+WLDTG+DN+EPG+I VPF ATPPVS
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  85   RIDAKRGQTIKLMYTASTSLPKDRESVFWFNVLEVPPKPD-AEKVANQSLLQLAFRTRIK  143
            RID+K+GQTIK+MYT+S +LP DRESVFWFNVLEVPPK++  E+ A Q+ LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  144  LFYRPDGLKGNPSEAPLALKWFWSGSEGKASLRVTNPTPYYVSFSSGDLEASGKRYPIDV  203
            LFYRP+GL + ++EAP  L W     +GK+ + V NPTPY+VSF+S +LE++GK+Y +D 
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  204  KMIAPFSDEVMKVNGLNGKANSAKVHFYAINDFGGAIEGNARL  246
            +M AP+++    ++     ++S+K+++  INDFGG I++ A L
Sbjct  207  QMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

43) ecpD in NC_020518


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  235 bits (875),  Expect = 2e-63, Method: Compositional matrix adjust.
 Identities = 133/223 (60%), Positives = 179/223 (81%), Gaps = 2/223 (0%)

Query  25   ADIVISGTRVIYKSDQKSVNVRLENKGNNPLLVQSWLDTGDDNAEPGSITVPFTATPPVS  84
            ADIVISGTR++Y++ QK VNVRLENKG+ PLLVQ+WLDTG+DN+EPG+I VPF ATPPVS
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  85   RIDAKRGQTIKLMYTASTSLPKDRESVFWFNVLEVPPKPD-AEKVANQSLLQLAFRTRIK  143
            RID+K+GQTIK+MYT+S +LP DRESVFWFNVLEVPPK++  E+ A Q+ LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  144  LFYRPDGLKGNPSEAPLALKWFWSGSEGKASLRVTNPTPYYVSFSSGDLEASGKRYPIDV  203
            LFYRP+GL + ++EAP  L W     +GK+ + V NPTPY+VSF+S +LE++GK+Y +D 
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  204  KMIAPFSDEVMKVNGLNGKANSAKVHFYAINDFGGAIEGNARL  246
            +M AP+++    ++     ++S+K+++  INDFGG I++ A L
Sbjct  207  QMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

44) yadV in NC_000913


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  235 bits (875),  Expect = 2e-63, Method: Compositional matrix adjust.
 Identities = 133/223 (60%), Positives = 179/223 (81%), Gaps = 2/223 (0%)

Query  25   ADIVISGTRVIYKSDQKSVNVRLENKGNNPLLVQSWLDTGDDNAEPGSITVPFTATPPVS  84
            ADIVISGTR++Y++ QK VNVRLENKG+ PLLVQ+WLDTG+DN+EPG+I VPF ATPPVS
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  85   RIDAKRGQTIKLMYTASTSLPKDRESVFWFNVLEVPPKPD-AEKVANQSLLQLAFRTRIK  143
            RID+K+GQTIK+MYT+S +LP DRESVFWFNVLEVPPK++  E+ A Q+ LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  144  LFYRPDGLKGNPSEAPLALKWFWSGSEGKASLRVTNPTPYYVSFSSGDLEASGKRYPIDV  203
            LFYRP+GL + ++EAP  L W     +GK+ + V NPTPY+VSF+S +LE++GK+Y +D 
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  204  KMIAPFSDEVMKVNGLNGKANSAKVHFYAINDFGGAIEGNARL  246
            +M AP+++    ++     ++S+K+++  INDFGG I++ A L
Sbjct  207  QMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

45) ecpD in NC_007779


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  235 bits (875),  Expect = 2e-63, Method: Compositional matrix adjust.
 Identities = 133/223 (60%), Positives = 179/223 (81%), Gaps = 2/223 (0%)

Query  25   ADIVISGTRVIYKSDQKSVNVRLENKGNNPLLVQSWLDTGDDNAEPGSITVPFTATPPVS  84
            ADIVISGTR++Y++ QK VNVRLENKG+ PLLVQ+WLDTG+DN+EPG+I VPF ATPPVS
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  85   RIDAKRGQTIKLMYTASTSLPKDRESVFWFNVLEVPPKPD-AEKVANQSLLQLAFRTRIK  143
            RID+K+GQTIK+MYT+S +LP DRESVFWFNVLEVPPK++  E+ A Q+ LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  144  LFYRPDGLKGNPSEAPLALKWFWSGSEGKASLRVTNPTPYYVSFSSGDLEASGKRYPIDV  203
            LFYRP+GL + ++EAP  L W     +GK+ + V NPTPY+VSF+S +LE++GK+Y +D 
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  204  KMIAPFSDEVMKVNGLNGKANSAKVHFYAINDFGGAIEGNARL  246
            +M AP+++    ++     ++S+K+++  INDFGG I++ A L
Sbjct  207  QMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

46) UMNK88_142 in NC_017641


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  235 bits (875),  Expect = 2e-63, Method: Compositional matrix adjust.
 Identities = 133/223 (60%), Positives = 179/223 (81%), Gaps = 2/223 (0%)

Query  25   ADIVISGTRVIYKSDQKSVNVRLENKGNNPLLVQSWLDTGDDNAEPGSITVPFTATPPVS  84
            ADIVISGTR++Y++ QK VNVRLENKG+ PLLVQ+WLDTG+DN+EPG+I VPF ATPPVS
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  85   RIDAKRGQTIKLMYTASTSLPKDRESVFWFNVLEVPPKPD-AEKVANQSLLQLAFRTRIK  143
            RID+K+GQTIK+MYT+S +LP DRESVFWFNVLEVPPK++  E+ A Q+ LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  144  LFYRPDGLKGNPSEAPLALKWFWSGSEGKASLRVTNPTPYYVSFSSGDLEASGKRYPIDV  203
            LFYRP+GL + ++EAP  L W     +GK+ + V NPTPY+VSF+S +LE++GK+Y +D 
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  204  KMIAPFSDEVMKVNGLNGKANSAKVHFYAINDFGGAIEGNARL  246
            +M AP+++    ++     ++S+K+++  INDFGG I++ A L
Sbjct  207  QMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

47) ecpD in NC_011748


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  235 bits (878),  Expect = 9e-64, Method: Compositional matrix adjust.
 Identities = 135/223 (61%), Positives = 179/223 (81%), Gaps = 2/223 (0%)

Query  25   ADIVISGTRVIYKSDQKSVNVRLENKGNNPLLVQSWLDTGDDNAEPGSITVPFTATPPVS  84
            ADIVISGTR++Y++ QK VNVRLENKG+ PLLVQ+WLDTG+DN+EPG+I VPF ATPPVS
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  85   RIDAKRGQTIKLMYTASTSLPKDRESVFWFNVLEVPPKPD-AEKVANQSLLQLAFRTRIK  143
            RID+K+GQTIK+MYT+S +LP DRESVFWFNVLEVPPK++  E+ A Q+ LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  144  LFYRPDGLKGNPSEAPLALKWFWSGSEGKASLRVTNPTPYYVSFSSGDLEASGKRYPIDV  203
            LFYRP+GL + ++EAP  L W     +GK+ + V NPTPY+VSF+S +LE++GK+Y +D 
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  204  KMIAPFSDEVMKVTGLNGKASSAKVHFYAINDFGGAIEGNASL  246
            +M AP+++    +      +SS+K+++  INDFGG I++ ASL
Sbjct  207  QMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

48) APECO78_04140 in NC_020163


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  235 bits (878),  Expect = 9e-64, Method: Compositional matrix adjust.
 Identities = 135/223 (61%), Positives = 179/223 (81%), Gaps = 2/223 (0%)

Query  25   ADIVISGTRVIYKSDQKSVNVRLENKGNNPLLVQSWLDTGDDNAEPGSITVPFTATPPVS  84
            ADIVISGTR++Y++ QK VNVRLENKG+ PLLVQ+WLDTG+DN+EPG+I VPF ATPPVS
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  85   RIDAKRGQTIKLMYTASTSLPKDRESVFWFNVLEVPPKPD-AEKVANQSLLQLAFRTRIK  143
            RID+K+GQTIK+MYT+S +LP DRESVFWFNVLEVPPK++  E+ A Q+ LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  144  LFYRPDGLKGNPSEAPLALKWFWSGSEGKASLRVTNPTPYYVSFSSGDLEASGKRYPIDV  203
            LFYRP+GL + ++EAP  L W     +GK+ + V NPTPY+VSF+S +LE++GK+Y +D 
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  204  KMIAPFSDEVMKVTGLNGKASSAKVHFYAINDFGGAIEGNASL  246
            +M AP+++    +      +SS+K+++  INDFGG I++ ASL
Sbjct  207  QMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

49) ecpD in NC_012971


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  235 bits (878),  Expect = 9e-64, Method: Compositional matrix adjust.
 Identities = 135/223 (61%), Positives = 179/223 (81%), Gaps = 2/223 (0%)

Query  25   ADIVISGTRVIYKSDQKSVNVRLENKGNNPLLVQSWLDTGDDNAEPGSITVPFTATPPVS  84
            ADIVISGTR++Y++ QK VNVRLENKG+ PLLVQ+WLDTG+DN+EPG+I VPF ATPPVS
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  85   RIDAKRGQTIKLMYTASTSLPKDRESVFWFNVLEVPPKPD-AEKVANQSLLQLAFRTRIK  143
            RID+K+GQTIK+MYT+S +LP DRESVFWFNVLEVPPK++  E+ A Q+ LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  144  LFYRPDGLKGNPSEAPLALKWFWSGSEGKASLRVTNPTPYYVSFSSGDLEASGKRYPIDV  203
            LFYRP+GL + ++EAP  L W     +GK+ + V NPTPY+VSF+S +LE++GK+Y +D 
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  204  KMIAPFSDEVMKVTGLNGKASSAKVHFYAINDFGGAIEGNASL  246
            +M AP+++    +      +SS+K+++  INDFGG I++ ASL
Sbjct  207  QMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

50) ecpD in NC_012892


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  235 bits (878),  Expect = 9e-64, Method: Compositional matrix adjust.
 Identities = 135/223 (61%), Positives = 179/223 (81%), Gaps = 2/223 (0%)

Query  25   ADIVISGTRVIYKSDQKSVNVRLENKGNNPLLVQSWLDTGDDNAEPGSITVPFTATPPVS  84
            ADIVISGTR++Y++ QK VNVRLENKG+ PLLVQ+WLDTG+DN+EPG+I VPF ATPPVS
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  85   RIDAKRGQTIKLMYTASTSLPKDRESVFWFNVLEVPPKPD-AEKVANQSLLQLAFRTRIK  143
            RID+K+GQTIK+MYT+S +LP DRESVFWFNVLEVPPK++  E+ A Q+ LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  144  LFYRPDGLKGNPSEAPLALKWFWSGSEGKASLRVTNPTPYYVSFSSGDLEASGKRYPIDV  203
            LFYRP+GL + ++EAP  L W     +GK+ + V NPTPY+VSF+S +LE++GK+Y +D 
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  204  KMIAPFSDEVMKVTGLNGKASSAKVHFYAINDFGGAIEGNASL  246
            +M AP+++    +      +SS+K+++  INDFGG I++ ASL
Sbjct  207  QMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

51) ECBD_3479 in NC_012947


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  235 bits (878),  Expect = 9e-64, Method: Compositional matrix adjust.
 Identities = 135/223 (61%), Positives = 179/223 (81%), Gaps = 2/223 (0%)

Query  25   ADIVISGTRVIYKSDQKSVNVRLENKGNNPLLVQSWLDTGDDNAEPGSITVPFTATPPVS  84
            ADIVISGTR++Y++ QK VNVRLENKG+ PLLVQ+WLDTG+DN+EPG+I VPF ATPPVS
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  85   RIDAKRGQTIKLMYTASTSLPKDRESVFWFNVLEVPPKPD-AEKVANQSLLQLAFRTRIK  143
            RID+K+GQTIK+MYT+S +LP DRESVFWFNVLEVPPK++  E+ A Q+ LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  144  LFYRPDGLKGNPSEAPLALKWFWSGSEGKASLRVTNPTPYYVSFSSGDLEASGKRYPIDV  203
            LFYRP+GL + ++EAP  L W     +GK+ + V NPTPY+VSF+S +LE++GK+Y +D 
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  204  KMIAPFSDEVMKVTGLNGKASSAKVHFYAINDFGGAIEGNASL  246
            +M AP+++    +      +SS+K+++  INDFGG I++ ASL
Sbjct  207  QMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

52) ecpD in NC_012967


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  235 bits (878),  Expect = 9e-64, Method: Compositional matrix adjust.
 Identities = 135/223 (61%), Positives = 179/223 (81%), Gaps = 2/223 (0%)

Query  25   ADIVISGTRVIYKSDQKSVNVRLENKGNNPLLVQSWLDTGDDNAEPGSITVPFTATPPVS  84
            ADIVISGTR++Y++ QK VNVRLENKG+ PLLVQ+WLDTG+DN+EPG+I VPF ATPPVS
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  85   RIDAKRGQTIKLMYTASTSLPKDRESVFWFNVLEVPPKPD-AEKVANQSLLQLAFRTRIK  143
            RID+K+GQTIK+MYT+S +LP DRESVFWFNVLEVPPK++  E+ A Q+ LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  144  LFYRPDGLKGNPSEAPLALKWFWSGSEGKASLRVTNPTPYYVSFSSGDLEASGKRYPIDV  203
            LFYRP+GL + ++EAP  L W     +GK+ + V NPTPY+VSF+S +LE++GK+Y +D 
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  204  KMIAPFSDEVMKVTGLNGKASSAKVHFYAINDFGGAIEGNASL  246
            +M AP+++    +      +SS+K+++  INDFGG I++ ASL
Sbjct  207  QMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

53) ecpD in NC_017660


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  235 bits (878),  Expect = 9e-64, Method: Compositional matrix adjust.
 Identities = 135/223 (61%), Positives = 179/223 (81%), Gaps = 2/223 (0%)

Query  25   ADIVISGTRVIYKSDQKSVNVRLENKGNNPLLVQSWLDTGDDNAEPGSITVPFTATPPVS  84
            ADIVISGTR++Y++ QK VNVRLENKG+ PLLVQ+WLDTG+DN+EPG+I VPF ATPPVS
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  85   RIDAKRGQTIKLMYTASTSLPKDRESVFWFNVLEVPPKPD-AEKVANQSLLQLAFRTRIK  143
            RID+K+GQTIK+MYT+S +LP DRESVFWFNVLEVPPK++  E+ A Q+ LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  144  LFYRPDGLKGNPSEAPLALKWFWSGSEGKASLRVTNPTPYYVSFSSGDLEASGKRYPIDV  203
            LFYRP+GL + ++EAP  L W     +GK+ + V NPTPY+VSF+S +LE++GK+Y +D 
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  204  KMIAPFSDEVMKVTGLNGKASSAKVHFYAINDFGGAIEGNASL  246
            +M AP+++    +      +SS+K+++  INDFGG I++ ASL
Sbjct  207  QMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

54) EKO11_3776 in NC_016902


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  235 bits (878),  Expect = 9e-64, Method: Compositional matrix adjust.
 Identities = 135/223 (61%), Positives = 179/223 (81%), Gaps = 2/223 (0%)

Query  25   ADIVISGTRVIYKSDQKSVNVRLENKGNNPLLVQSWLDTGDDNAEPGSITVPFTATPPVS  84
            ADIVISGTR++Y++ QK VNVRLENKG+ PLLVQ+WLDTG+DN+EPG+I VPF ATPPVS
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  85   RIDAKRGQTIKLMYTASTSLPKDRESVFWFNVLEVPPKPD-AEKVANQSLLQLAFRTRIK  143
            RID+K+GQTIK+MYT+S +LP DRESVFWFNVLEVPPK++  E+ A Q+ LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  144  LFYRPDGLKGNPSEAPLALKWFWSGSEGKASLRVTNPTPYYVSFSSGDLEASGKRYPIDV  203
            LFYRP+GL + ++EAP  L W     +GK+ + V NPTPY+VSF+S +LE++GK+Y +D 
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  204  KMIAPFSDEVMKVTGLNGKASSAKVHFYAINDFGGAIEGNASL  246
            +M AP+++    +      +SS+K+++  INDFGG I++ ASL
Sbjct  207  QMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

55) LY180_00680 in NC_022364


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  235 bits (878),  Expect = 9e-64, Method: Compositional matrix adjust.
 Identities = 135/223 (61%), Positives = 179/223 (81%), Gaps = 2/223 (0%)

Query  25   ADIVISGTRVIYKSDQKSVNVRLENKGNNPLLVQSWLDTGDDNAEPGSITVPFTATPPVS  84
            ADIVISGTR++Y++ QK VNVRLENKG+ PLLVQ+WLDTG+DN+EPG+I VPF ATPPVS
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  85   RIDAKRGQTIKLMYTASTSLPKDRESVFWFNVLEVPPKPD-AEKVANQSLLQLAFRTRIK  143
            RID+K+GQTIK+MYT+S +LP DRESVFWFNVLEVPPK++  E+ A Q+ LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  144  LFYRPDGLKGNPSEAPLALKWFWSGSEGKASLRVTNPTPYYVSFSSGDLEASGKRYPIDV  203
            LFYRP+GL + ++EAP  L W     +GK+ + V NPTPY+VSF+S +LE++GK+Y +D 
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  204  KMIAPFSDEVMKVTGLNGKASSAKVHFYAINDFGGAIEGNASL  246
            +M AP+++    +      +SS+K+++  INDFGG I++ ASL
Sbjct  207  QMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

56) ECO103_0140 in NC_013353


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  235 bits (878),  Expect = 9e-64, Method: Compositional matrix adjust.
 Identities = 135/223 (61%), Positives = 179/223 (81%), Gaps = 2/223 (0%)

Query  25   ADIVISGTRVIYKSDQKSVNVRLENKGNNPLLVQSWLDTGDDNAEPGSITVPFTATPPVS  84
            ADIVISGTR++Y++ QK VNVRLENKG+ PLLVQ+WLDTG+DN+EPG+I VPF ATPPVS
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  85   RIDAKRGQTIKLMYTASTSLPKDRESVFWFNVLEVPPKPD-AEKVANQSLLQLAFRTRIK  143
            RID+K+GQTIK+MYT+S +LP DRESVFWFNVLEVPPK++  E+ A Q+ LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  144  LFYRPDGLKGNPSEAPLALKWFWSGSEGKASLRVTNPTPYYVSFSSGDLEASGKRYPIDV  203
            LFYRP+GL + ++EAP  L W     +GK+ + V NPTPY+VSF+S +LE++GK+Y +D 
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  204  KMIAPFSDEVMKVTGLNGKASSAKVHFYAINDFGGAIEGNASL  246
            +M AP+++    +      +SS+K+++  INDFGG I++ ASL
Sbjct  207  QMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

57) O3M_20765 in NC_018650


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  235 bits (878),  Expect = 9e-64, Method: Compositional matrix adjust.
 Identities = 135/223 (61%), Positives = 179/223 (81%), Gaps = 2/223 (0%)

Query  25   ADIVISGTRVIYKSDQKSVNVRLENKGNNPLLVQSWLDTGDDNAEPGSITVPFTATPPVS  84
            ADIVISGTR++Y++ QK VNVRLENKG+ PLLVQ+WLDTG+DN+EPG+I VPF ATPPVS
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  85   RIDAKRGQTIKLMYTASTSLPKDRESVFWFNVLEVPPKPD-AEKVANQSLLQLAFRTRIK  143
            RID+K+GQTIK+MYT+S +LP DRESVFWFNVLEVPPK++  E+ A Q+ LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  144  LFYRPDGLKGNPSEAPLALKWFWSGSEGKASLRVTNPTPYYVSFSSGDLEASGKRYPIDV  203
            LFYRP+GL + ++EAP  L W     +GK+ + V NPTPY+VSF+S +LE++GK+Y +D 
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  204  KMIAPFSDEVMKVTGLNGKASSAKVHFYAINDFGGAIEGNASL  246
            +M AP+++    +      +SS+K+++  INDFGG I++ ASL
Sbjct  207  QMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

58) O3O_04520 in NC_018661


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  235 bits (878),  Expect = 9e-64, Method: Compositional matrix adjust.
 Identities = 135/223 (61%), Positives = 179/223 (81%), Gaps = 2/223 (0%)

Query  25   ADIVISGTRVIYKSDQKSVNVRLENKGNNPLLVQSWLDTGDDNAEPGSITVPFTATPPVS  84
            ADIVISGTR++Y++ QK VNVRLENKG+ PLLVQ+WLDTG+DN+EPG+I VPF ATPPVS
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  85   RIDAKRGQTIKLMYTASTSLPKDRESVFWFNVLEVPPKPD-AEKVANQSLLQLAFRTRIK  143
            RID+K+GQTIK+MYT+S +LP DRESVFWFNVLEVPPK++  E+ A Q+ LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  144  LFYRPDGLKGNPSEAPLALKWFWSGSEGKASLRVTNPTPYYVSFSSGDLEASGKRYPIDV  203
            LFYRP+GL + ++EAP  L W     +GK+ + V NPTPY+VSF+S +LE++GK+Y +D 
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  204  KMIAPFSDEVMKVTGLNGKASSAKVHFYAINDFGGAIEGNASL  246
            +M AP+++    +      +SS+K+++  INDFGG I++ ASL
Sbjct  207  QMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

59) O3K_20865 in NC_018658


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  235 bits (878),  Expect = 9e-64, Method: Compositional matrix adjust.
 Identities = 135/223 (61%), Positives = 179/223 (81%), Gaps = 2/223 (0%)

Query  25   ADIVISGTRVIYKSDQKSVNVRLENKGNNPLLVQSWLDTGDDNAEPGSITVPFTATPPVS  84
            ADIVISGTR++Y++ QK VNVRLENKG+ PLLVQ+WLDTG+DN+EPG+I VPF ATPPVS
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  85   RIDAKRGQTIKLMYTASTSLPKDRESVFWFNVLEVPPKPD-AEKVANQSLLQLAFRTRIK  143
            RID+K+GQTIK+MYT+S +LP DRESVFWFNVLEVPPK++  E+ A Q+ LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  144  LFYRPDGLKGNPSEAPLALKWFWSGSEGKASLRVTNPTPYYVSFSSGDLEASGKRYPIDV  203
            LFYRP+GL + ++EAP  L W     +GK+ + V NPTPY+VSF+S +LE++GK+Y +D 
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  204  KMIAPFSDEVMKVTGLNGKASSAKVHFYAINDFGGAIEGNASL  246
            +M AP+++    +      +SS+K+++  INDFGG I++ ASL
Sbjct  207  QMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

60) ECO111_0142 in NC_013364


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  235 bits (878),  Expect = 9e-64, Method: Compositional matrix adjust.
 Identities = 135/223 (61%), Positives = 179/223 (81%), Gaps = 2/223 (0%)

Query  25   ADIVISGTRVIYKSDQKSVNVRLENKGNNPLLVQSWLDTGDDNAEPGSITVPFTATPPVS  84
            ADIVISGTR++Y++ QK VNVRLENKG+ PLLVQ+WLDTG+DN+EPG+I VPF ATPPVS
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  85   RIDAKRGQTIKLMYTASTSLPKDRESVFWFNVLEVPPKPD-AEKVANQSLLQLAFRTRIK  143
            RID+K+GQTIK+MYT+S +LP DRESVFWFNVLEVPPK++  E+ A Q+ LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  144  LFYRPDGLKGNPSEAPLALKWFWSGSEGKASLRVTNPTPYYVSFSSGDLEASGKRYPIDV  203
            LFYRP+GL + ++EAP  L W     +GK+ + V NPTPY+VSF+S +LE++GK+Y +D 
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  204  KMIAPFSDEVMKVTGLNGKASSAKVHFYAINDFGGAIEGNASL  246
            +M AP+++    +      +SS+K+++  INDFGG I++ ASL
Sbjct  207  QMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

61) ECO26_0143 in NC_013361


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  235 bits (878),  Expect = 9e-64, Method: Compositional matrix adjust.
 Identities = 135/223 (61%), Positives = 179/223 (81%), Gaps = 2/223 (0%)

Query  25   ADIVISGTRVIYKSDQKSVNVRLENKGNNPLLVQSWLDTGDDNAEPGSITVPFTATPPVS  84
            ADIVISGTR++Y++ QK VNVRLENKG+ PLLVQ+WLDTG+DN+EPG+I VPF ATPPVS
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  85   RIDAKRGQTIKLMYTASTSLPKDRESVFWFNVLEVPPKPD-AEKVANQSLLQLAFRTRIK  143
            RID+K+GQTIK+MYT+S +LP DRESVFWFNVLEVPPK++  E+ A Q+ LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  144  LFYRPDGLKGNPSEAPLALKWFWSGSEGKASLRVTNPTPYYVSFSSGDLEASGKRYPIDV  203
            LFYRP+GL + ++EAP  L W     +GK+ + V NPTPY+VSF+S +LE++GK+Y +D 
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  204  KMIAPFSDEVMKVTGLNGKASSAKVHFYAINDFGGAIEGNASL  246
            +M AP+++    +      +SS+K+++  INDFGG I++ ASL
Sbjct  207  QMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

62) ECSE_0140 in NC_011415


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  235 bits (878),  Expect = 9e-64, Method: Compositional matrix adjust.
 Identities = 135/223 (61%), Positives = 179/223 (81%), Gaps = 2/223 (0%)

Query  25   ADIVISGTRVIYKSDQKSVNVRLENKGNNPLLVQSWLDTGDDNAEPGSITVPFTATPPVS  84
            ADIVISGTR++Y++ QK VNVRLENKG+ PLLVQ+WLDTG+DN+EPG+I VPF ATPPVS
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  85   RIDAKRGQTIKLMYTASTSLPKDRESVFWFNVLEVPPKPD-AEKVANQSLLQLAFRTRIK  143
            RID+K+GQTIK+MYT+S +LP DRESVFWFNVLEVPPK++  E+ A Q+ LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  144  LFYRPDGLKGNPSEAPLALKWFWSGSEGKASLRVTNPTPYYVSFSSGDLEASGKRYPIDV  203
            LFYRP+GL + ++EAP  L W     +GK+ + V NPTPY+VSF+S +LE++GK+Y +D 
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  204  KMIAPFSDEVMKVTGLNGKASSAKVHFYAINDFGGAIEGNASL  246
            +M AP+++    +      +SS+K+++  INDFGG I++ ASL
Sbjct  207  QMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

63) ecpD in NC_017635


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  235 bits (878),  Expect = 9e-64, Method: Compositional matrix adjust.
 Identities = 135/223 (61%), Positives = 179/223 (81%), Gaps = 2/223 (0%)

Query  25   ADIVISGTRVIYKSDQKSVNVRLENKGNNPLLVQSWLDTGDDNAEPGSITVPFTATPPVS  84
            ADIVISGTR++Y++ QK VNVRLENKG+ PLLVQ+WLDTG+DN+EPG+I VPF ATPPVS
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  85   RIDAKRGQTIKLMYTASTSLPKDRESVFWFNVLEVPPKPD-AEKVANQSLLQLAFRTRIK  143
            RID+K+GQTIK+MYT+S +LP DRESVFWFNVLEVPPK++  E+ A Q+ LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  144  LFYRPDGLKGNPSEAPLALKWFWSGSEGKASLRVTNPTPYYVSFSSGDLEASGKRYPIDV  203
            LFYRP+GL + ++EAP  L W     +GK+ + V NPTPY+VSF+S +LE++GK+Y +D 
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  204  KMIAPFSDEVMKVTGLNGKASSAKVHFYAINDFGGAIEGNASL  246
            +M AP+++    +      +SS+K+++  INDFGG I++ ASL
Sbjct  207  QMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

64) ecpD in NC_017664


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  235 bits (878),  Expect = 9e-64, Method: Compositional matrix adjust.
 Identities = 135/223 (61%), Positives = 179/223 (81%), Gaps = 2/223 (0%)

Query  25   ADIVISGTRVIYKSDQKSVNVRLENKGNNPLLVQSWLDTGDDNAEPGSITVPFTATPPVS  84
            ADIVISGTR++Y++ QK VNVRLENKG+ PLLVQ+WLDTG+DN+EPG+I VPF ATPPVS
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  85   RIDAKRGQTIKLMYTASTSLPKDRESVFWFNVLEVPPKPD-AEKVANQSLLQLAFRTRIK  143
            RID+K+GQTIK+MYT+S +LP DRESVFWFNVLEVPPK++  E+ A Q+ LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  144  LFYRPDGLKGNPSEAPLALKWFWSGSEGKASLRVTNPTPYYVSFSSGDLEASGKRYPIDV  203
            LFYRP+GL + ++EAP  L W     +GK+ + V NPTPY+VSF+S +LE++GK+Y +D 
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  204  KMIAPFSDEVMKVTGLNGKASSAKVHFYAINDFGGAIEGNASL  246
            +M AP+++    +      +SS+K+++  INDFGG I++ ASL
Sbjct  207  QMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

65) ecpD in NC_011750


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  234 bits (873),  Expect = 2e-63, Method: Compositional matrix adjust.
 Identities = 133/223 (60%), Positives = 178/223 (80%), Gaps = 2/223 (0%)

Query  25   ADIVISGTRVIYKSDQKSVNVRLENKGNNPLLVQSWLDTGDDNAEPGSITVPFTATPPVS  84
            ADIVISGTR++Y++ QK VNVRLENKG+ PLLVQ+WLDTG+DN+EPG+I VPF ATPPVS
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  85   RIDAKRGQTIKLMYTASTSLPKDRESVFWFNVLEVPPKPD-AEKVANQSLLQLAFRTRIK  143
            RID+K+GQTIK+MYT+S +LP DRESVFWFNVLEVPPK++  E+ A Q+ LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  144  LFYRPDGLKGNPSEAPLALKWFWSGSEGKASLRVTNPTPYYVSFSSGDLEASGKRYPIDV  203
            LFYRP+GL + ++EAP  L W     +GK+ + V NPTPY+VSF+S +LE++GK+Y +D 
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  204  KMIAPFSDEVMKVTGLNGKANSAKVHFYAINDFGGAIEGNARL  246
            +M AP+++    +      ++S+K+++  INDFGG I++ A L
Sbjct  207  QMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

66) ecpD in NC_017646


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  234 bits (873),  Expect = 2e-63, Method: Compositional matrix adjust.
 Identities = 133/223 (60%), Positives = 178/223 (80%), Gaps = 2/223 (0%)

Query  25   ADIVISGTRVIYKSDQKSVNVRLENKGNNPLLVQSWLDTGDDNAEPGSITVPFTATPPVS  84
            ADIVISGTR++Y++ QK VNVRLENKG+ PLLVQ+WLDTG+DN+EPG+I VPF ATPPVS
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  85   RIDAKRGQTIKLMYTASTSLPKDRESVFWFNVLEVPPKPD-AEKVANQSLLQLAFRTRIK  143
            RID+K+GQTIK+MYT+S +LP DRESVFWFNVLEVPPK++  E+ A Q+ LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  144  LFYRPDGLKGNPSEAPLALKWFWSGSEGKASLRVTNPTPYYVSFSSGDLEASGKRYPIDV  203
            LFYRP+GL + ++EAP  L W     +GK+ + V NPTPY+VSF+S +LE++GK+Y +D 
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  204  KMIAPFSDEVMKVTGLNGKANSAKVHFYAINDFGGAIEGNARL  246
            +M AP+++    +      ++S+K+++  INDFGG I++ A L
Sbjct  207  QMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

67) ecpD in NC_011740


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  234 bits (871),  Expect = 3e-63, Method: Compositional matrix adjust.
 Identities = 129/223 (58%), Positives = 179/223 (81%), Gaps = 2/223 (0%)

Query  25   ADIVISGTRVIYKSDQKSVSVRLENKGNNPLLVQSWLDTGDDNAEPGSITVPFTATPPVS  84
            ADIVISGTR++Y++ QK V+VRLENKG+ PLLVQ+WLDTG+DN+EPG+I VPF ATPPVS
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  85   RIDAKRGQTIKLMYTASSVLPKDRESVFWFNVLEVPPKPD-AATTTNQSLLQLAFRTRIK  143
            RID+K+GQTIK+MYT+S  LP DRESVFWFNVLEVPPK++    ++ Q+ LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  144  LFYRPEGLKGNPSDAPLALKWTWATAGGQTALRVANPTPYYVSFSSGDLETSGKRYPLDV  203
            LFYRP+GL + +++AP  L W      G++ + V NPTPY+VSF+S +LE++GK+Y +D 
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  204  KMIAPFSNDVIKVNGMSGKSSSAKVHFYAINDFGGAIEGNATL  246
            +M AP+++  + ++  +  +SS+K+++  INDFGG I++ A+L
Sbjct  207  QMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

68) ecpD in NC_017644


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  234 bits (871),  Expect = 4e-63, Method: Compositional matrix adjust.
 Identities = 130/223 (59%), Positives = 176/223 (79%), Gaps = 2/223 (0%)

Query  25   ADIVISGTRVIYKSDQKSVNIRLENKGNNPLLVQSWLDTGDDNAEPGSITVPFTATPPVS  84
            ADIVISGTR++Y++ QK VN+RLENKG+ PLLVQ+WLDTG+DN+EPG+I VPF ATPPVS
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  85   RIDAKRGQTIKLMYTASSVLPKDRESVFWFNVLEVPPKPD-AATVANQSLLQLAFRTRIK  143
            RID+K+GQTIK+MYT+S  LP DRESVFWFNVLEVPPK++     A Q+ LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  144  LFYRPEALKGNPSEAPLALKWSWSGSEGKAALRVANPTPYYVSFSSGDLEASGKRFPIDV  203
            LFYRP++L + ++EAP  L W     +GK+ + V NPTPY+VSF+S +LE++GK++ +D 
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  204  KMIAPFSDEVMKVTGLNGKANSAKVHFYAINDFGGAIEGNASL  246
            +M AP+++    +      ++S+K+++  INDFGG I++ ASL
Sbjct  207  QMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

69) ECSF_0153 in NC_013654


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  234 bits (871),  Expect = 4e-63, Method: Compositional matrix adjust.
 Identities = 130/223 (59%), Positives = 176/223 (79%), Gaps = 2/223 (0%)

Query  25   ADIVISGTRVIYKSDQKSVNIRLENKGNNPLLVQSWLDTGDDNAEPGSITVPFTATPPVS  84
            ADIVISGTR++Y++ QK VN+RLENKG+ PLLVQ+WLDTG+DN+EPG+I VPF ATPPVS
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  85   RIDAKRGQTIKLMYTASSVLPKDRESVFWFNVLEVPPKPD-AATVANQSLLQLAFRTRIK  143
            RID+K+GQTIK+MYT+S  LP DRESVFWFNVLEVPPK++     A Q+ LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  144  LFYRPEALKGNPSEAPLALKWSWSGSEGKAALRVANPTPYYVSFSSGDLEASGKRFPIDV  203
            LFYRP++L + ++EAP  L W     +GK+ + V NPTPY+VSF+S +LE++GK++ +D 
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  204  KMIAPFSDEVMKVTGLNGKANSAKVHFYAINDFGGAIEGNASL  246
            +M AP+++    +      ++S+K+++  INDFGG I++ ASL
Sbjct  207  QMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

70) EcDH1_3462 in NC_017625


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  233 bits (870),  Expect = 4e-63, Method: Compositional matrix adjust.
 Identities = 132/223 (60%), Positives = 178/223 (80%), Gaps = 2/223 (0%)

Query  25   ADIVISGTRVIYKSDQKSVNARLENKGNNPLLVQSWLDTGDDNAEPGSITVPFTATPPVS  84
            ADIVISGTR++Y++ QK VN RLENKG+ PLLVQ+WLDTG+DN+EPG+I VPF ATPPVS
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  85   RIDAKRGQTIKLMYTASTSLPKDRESVFWFNVLEVPPKPD-AEKVANQSLLQLAFRTRIK  143
            RID+K+GQTIK+MYT+S +LP DRESVFWFNVLEVPPK++  E+ A Q+ LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  144  LFYRPDGLKGNPSEAPLALKWFWSGSEGKASLRVTNPTPYYVSFSSGDLEASGKRYPIDV  203
            LFYRP+GL + ++EAP  L W     +GK+ + V NPTPY+VSF+S +LE++GK+Y +D 
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  204  KMIAPFSDEVMKVNGLNGKANSAKVHFYAINDFGGAIEGNARL  246
            +M AP+++    ++     ++S+K+++  INDFGG I++ A L
Sbjct  207  QMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

71) ecpD in NC_017638


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  233 bits (870),  Expect = 4e-63, Method: Compositional matrix adjust.
 Identities = 132/223 (60%), Positives = 178/223 (80%), Gaps = 2/223 (0%)

Query  25   ADIVISGTRVIYKSDQKSVNARLENKGNNPLLVQSWLDTGDDNAEPGSITVPFTATPPVS  84
            ADIVISGTR++Y++ QK VN RLENKG+ PLLVQ+WLDTG+DN+EPG+I VPF ATPPVS
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  85   RIDAKRGQTIKLMYTASTSLPKDRESVFWFNVLEVPPKPD-AEKVANQSLLQLAFRTRIK  143
            RID+K+GQTIK+MYT+S +LP DRESVFWFNVLEVPPK++  E+ A Q+ LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  144  LFYRPDGLKGNPSEAPLALKWFWSGSEGKASLRVTNPTPYYVSFSSGDLEASGKRYPIDV  203
            LFYRP+GL + ++EAP  L W     +GK+ + V NPTPY+VSF+S +LE++GK+Y +D 
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  204  KMIAPFSDEVMKVNGLNGKANSAKVHFYAINDFGGAIEGNARL  246
            +M AP+++    ++     ++S+K+++  INDFGG I++ A L
Sbjct  207  QMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

72) EC042_0140 in NC_017626


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  231 bits (863),  Expect = 1e-62, Method: Compositional matrix adjust.
 Identities = 135/223 (61%), Positives = 177/223 (80%), Gaps = 4/223 (1%)

Query  24   ADIVISGTRVIYKSDQKSVSVRLENKGNSHLLVQSWLDTGDDNAEPGSINVPFTATPPVS  83
            ADIVISGTR++Y++ QK V+VRLENKG+  LLVQ+WLDTG+DN+EPG+I+VPF ATPPVS
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  84   RIDAKRGQTIKLMYTGSTVLPSDKESVFWFNVLEVPPKPD-ASKVENQSLLQLAFRTRIK  142
            RID+K+GQTIK+MYTGS  LPSD+ESVFWFNVLEVPPK++   +   Q+ LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  143  LFYRPAGLNGNPSEAPLALKW--KWAEGKSGLSVYNPTPYYVSFNSAELIAGGKSNPLNV  200
            LFYRP GL + ++EAP  L W  K  +GKS ++V NPTPY+VSFNS EL + GK   ++ 
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  201  KMVAPKSEEIFTISGSGGKATSGKVHFSAINDFGGAIEGDVNL  243
            +M AP +E  FT+  ++  ++SGK+++S INDFGG I++  +L
Sbjct  207  QMAAPLTETSFTLK-TATTTSSGKINYSFINDFGGIINATASL  248

73) ECUMN_0137 in NC_011751


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  230 bits (857),  Expect = 5e-62, Method: Compositional matrix adjust.
 Identities = 134/223 (61%), Positives = 177/223 (80%), Gaps = 4/223 (1%)

Query  24   ADIVISGTRVIYKSDQKSVSVRLENKGNSHLLVQSWLDTGDDNAEPGSINVPFTATPPVS  83
            ADIVISGTR++Y++ QK V+VRLENKG+  LLVQ+WLDTG+DN+EPG+I+VPF ATPPVS
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  84   RIDAKRGQTIKLMYTGSTVLPSDKESVFWFNVLEVPPKPD-ASKVENQSLLQLAFRTRIK  142
            RID+K+GQTIK+MYTGS  LPSD+ESVFWFNVLEVPPK++   +   Q+ LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  143  LFYRPAGLNGNPSEAPLALKW--KWAEGKSGLSVYNPTSYYVSFNSAELIAGGKSNPLNV  200
            LFYRP GL + ++EAP  L W  K  +GKS ++V NPT+Y+VSFNS EL + GK   ++ 
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  201  KMVAPKSEEIFTISGSGGKATSGKVHFSAINDFGGAIEGDVNL  243
            +M AP +E  FT+  ++  ++SGK+++S INDFGG I++  +L
Sbjct  207  QMAAPLTETSFTLK-TATTTSSGKINYSFINDFGGIINATASL  248

74) ENC_46520 in NC_021046


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  204 bits (760),  Expect = 2e-54, Method: Compositional matrix adjust.
 Identities = 113/222 (51%), Positives = 160/222 (73%), Gaps = 2/222 (0%)

Query  28   DIVISGTRIIYPQSSKDVVVNLDNHGTKPLLVQTWLDDGRDGVNPEELKLPFIITPPVSR  87
            DIVISGTRI+Y  + KDV V L+N G++PLLVQTWLD G D  +P  +K+PF  TPPVSR
Sbjct  28   DIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVSR  87

Query  88   IDPKKGQSVRITYTGT-PLPQDRESLFWFNVLEIPPKS-KAADKENLNQLQLAFRTRIKF  145
            IDPKKGQ+++I YTG+  LP DRES+FWFNVLE+PPK+ K  +    N LQ AFRTRIK+
Sbjct  88   IDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIKL  147

Query  146  FYRPDGLKGSAGEAAEHLTWTQKKEGNAVKLVAHNNSPYNVSVSAVTIKASQKTYDVDHK  205
            FYRP+GL + AGEA+  LTW  K E     +  +N +PY VS +++ + ++ K Y VD +
Sbjct  148  FYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDGQ  207

Query  206  AVPPFSDTTMTVKGLASAVNGKVEFDSINDYGGTDHHEAGLK  247
              +P+++T+ T+K  +++ +GK+++  IND+GG  +  A+L+
Sbjct  208  MAAPLTETSFTLKTATTTSSGKINYSFINDFGGIINATASLQ  249

75) fimB in NC_008314


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  203 bits (753),  Expect = 8e-54, Method: Compositional matrix adjust.
 Identities = 105/245 (43%), Positives = 169/245 (69%), Gaps = 10/245 (4%)

Query  9    ISAGVIALGLMSALHAQ---ASVVIAGTRVIYKAKDTETTIKLTNEGQSPALTQAWIDKG  65
            + ++   + L ++L ++   A +VI+GTR++Y++ + +  ++L N G  P L Q+W+D G
Sbjct  7    LRTAFTVITLTGTLLSNVAWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTG  66

Query  66   DAKAAPSSIDVPFTVTPPVSRIDPKKGQTLRIIYTG-EPLPQDRESVFWLNVLEIPPKPT  124
            + ++ P++I VPF  TPPVSRIDPKKGQT++I+YTG + LP DRESVFW+NVLE+PPK+ 
Sbjct  67   NDNTEPGAIKVPFNATPPVSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKAN  126

Query  125  AEEADV--NKLQLAFRSRIKLFFRPAGLEGNADDAPGSISWRVTHAGGKPALEASNPSKY  182
             +E     N LQ AFR+RIKLF+RP GL + A++AP+ ++WR+ H  GK+ +  +NP+ Y
Sbjct  127  KNENSAAQNTLQSAFRTRIKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPY  186

Query  183  HVSFANLELVGGGKTAKF-EEGGMVGPGEAKTFPLTGDVAQGTEARVRYKAINDYGGAVS  241
             VSF ++EL + GK  K+  +G M +P    +F L    + ++ +++ Y  IND+GG ++
Sbjct  187  FVSFNSIELESTGK--KYIVDGQMAAPLTETSFTLKTATTTSS-GKINYSFINDFGGIIN  243

Query  242  GEAAL  246
            + A+L
Sbjct  244  ATASL  248

76) ECL_00941 in NC_014121


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  199 bits (739),  Expect = 1e-52, Method: Compositional matrix adjust.
 Identities = 109/215 (51%), Positives = 157/215 (74%), Gaps = 4/215 (1%)

Query  27   ADIVISGTRVIYPESAKDVTVSMDNRGTRPLLVQTWLDDGRDTTNPQELKLPFIVTPPVS  86
            ADIVISGTR++Y  + KDV V ++N+G+RPLLVQTWLD G D T+P  +K+PF  TPPVS
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  87   RVEPQKGQTVRITWLG-QALPKDKESLFWFNVLEVPPKAKESDN---QSMLQLAFRTRIK  142
            R++P+KGQT++I   G Q+LP D+ES+FWFNVLEVPPKA+ ++N   Q+ LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  143  LFFRPTGLKGEPTDAAKNLKWSQTRQGQKIVLSAKNDSPYYVSLASAALISGGKSYEIET  202
            LF+RP GL + + +A+ +L W   ++  K V++ +N +PY+VS+ S  L S GK Y ++ 
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  203  HYIEPFSSQTMNVKNYTSSGNSKITWQAINDFGGI  237
            +   P++  +  +K  T+++++KI    INDFGGI
Sbjct  207  QMAAPLTETSFTLKTATTTSSGKINYSFINDFGGI  241

77) A3UG_03910 in NC_018079


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  199 bits (741),  Expect = 6e-53, Method: Compositional matrix adjust.
 Identities = 111/214 (52%), Positives = 157/214 (74%), Gaps = 4/214 (1%)

Query  28   DIVISGTRIIYPESAKDVTVSMDNRGTRPLLVQTWLDDGRDSTNPQELKLPFIVTPPVSR  87
            DIVISGTRI+Y  + KDV V ++N+G+RPLLVQTWLD G D+T+P  +K+PF  TPPVSR
Sbjct  28   DIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVSR  87

Query  88   VEPQKGQTVRITWLG-QTLPKDKESLFWFNVLEVPPKAKESDN---QSMLQLAFRTRIKL  143
            ++P+KGQT++I   G QTLP D+ES+FWFNVLEVPPKA+ ++N   Q+ LQ AFRTRIKL
Sbjct  88   IDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIKL  147

Query  144  FFRPTGLKGEPTEAAKNLKWSQTRQGQKVVLSAKNDSPYYVSLASASLISGGKRYEIETH  203
            F+RP GL + + EA+ +L W   ++  K V++ +N +PY+VS+ S  L S GK+Y ++ +
Sbjct  148  FYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDGQ  207

Query  204  YIEPFSSQTMNVKNAPLTGNSKITWQAINDYGGI  237
               P++  +  +K A  T+++KI    IND+GGI
Sbjct  208  MAAPLTETSFTLKTATTTSSGKINYSFINDFGGI  241

78) SSPA0180 in NC_011147


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  197 bits (731),  Expect = 4e-52, Method: Compositional matrix adjust.
 Identities = 113/223 (51%), Positives = 159/223 (72%), Gaps = 2/223 (0%)

Query  30   ADIVISGTRIVYPASSKDVIVNLDNRGNKPLLVQTWLDDGRDGVDPQELKLPFVITPPVS  89
            ADIVISGTRIVY ++ KDV V L+N+G++PLLVQTWLD G D  +P  +K+PF  TPPVS
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  90   RIDPQKGQSLRITYMGS-TLPQDRESLFWFNVLEIPPKS-KAKEGESLNQLQLAFRTRIK  147
            RIDP+KGQ+++I Y GS TLP DRES+FWFNVLE+PPK+ K  ++ + N LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  148  LFFRPDGLKGTPGDAAANLKWSQKKEDNTLSLFAQNDSAYNVSISNVKLKVGGKEYTVDS  207
            LF+RP+GL + +G+A+A+L W  K E+    +  +N ++Y VS++++ L   GK Y VD+
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  208  KSVLPFSGVSMPVKGLSNNINGTVIYSTINDNGGTNKREAKID  250
            +   P++  S  +K  +   +G + YS IND GG  +  A ++
Sbjct  207  QMAAPLTETSFTLKTATTTSSGKINYSFINDFGGIINATASLQ  249

79) stkB in NC_006511


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  197 bits (731),  Expect = 4e-52, Method: Compositional matrix adjust.
 Identities = 113/223 (51%), Positives = 159/223 (72%), Gaps = 2/223 (0%)

Query  30   ADIVISGTRIVYPASSKDVIVNLDNRGNKPLLVQTWLDDGRDGVDPQELKLPFVITPPVS  89
            ADIVISGTRIVY ++ KDV V L+N+G++PLLVQTWLD G D  +P  +K+PF  TPPVS
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  90   RIDPQKGQSLRITYMGS-TLPQDRESLFWFNVLEIPPKS-KAKEGESLNQLQLAFRTRIK  147
            RIDP+KGQ+++I Y GS TLP DRES+FWFNVLE+PPK+ K  ++ + N LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  148  LFFRPDGLKGTPGDAAANLKWSQKKEDNTLSLFAQNDSAYNVSISNVKLKVGGKEYTVDS  207
            LF+RP+GL + +G+A+A+L W  K E+    +  +N ++Y VS++++ L   GK Y VD+
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  208  KSVLPFSGVSMPVKGLSNNINGTVIYSTINDNGGTNKREAKID  250
            +   P++  S  +K  +   +G + YS IND GG  +  A ++
Sbjct  207  QMAAPLTETSFTLKTATTTSSGKINYSFINDFGGIINATASLQ  249

80) SEEB0189_18415 in NC_021844


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  196 bits (726),  Expect = 1e-51, Method: Compositional matrix adjust.
 Identities = 112/223 (51%), Positives = 158/223 (71%), Gaps = 2/223 (0%)

Query  30   ADIVISGTRIVYPASSKDVIVNLDNRGNKPLLVQTWLDDGRDGVDPQELKLPFVITPPVS  89
            ADIVISGTRIVY ++ KDV V L+N+G++PLLVQTWLD G D  +P  +K+PF  TPPVS
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  90   RIDPQKGQSLRITYMGS-ALPQDRESLFWFNVLEIPPKS-KAKEGESLNQLQLAFRTRIK  147
            RIDP+KGQ+++I Y GS +LP DRES+FWFNVLE+PPK+ K  ++ + N LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  148  LFFRPDGLKGTPGDAAANLKWSQKKEGNTLSLFAQNDSAYNVSISNVKLKVGGKEYTVDS  207
            LF+RP+GL + +G+A+A+L W  K E     +  +N ++Y VS++++ L   GK Y VD+
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  208  KSVLPFSGVSMPVKGLSNNINGTVIYSTINDNGGTNKREAKID  250
            +   P++  S  +K  +   +G + YS IND GG  +  A ++
Sbjct  207  QMAAPLTETSFTLKTATTTSSGKINYSFINDFGGIINATASLQ  249

81) Q7S_17760 in NC_017047


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  196 bits (726),  Expect = 9e-52, Method: Compositional matrix adjust.
 Identities = 110/223 (50%), Positives = 166/223 (75%), Gaps = 5/223 (2%)

Query  26   ADVVISGTRIIYPAQAKEITVKLDNRGEKALLVQSWLDDGREDVNPQEMKIPFLVTPPIS  85
            AD+VISGTRI+Y +  K++ V+L+N+G ++LLVQ+WLD G ++ +P  +K+PF  TPP+S
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  86   RMNAKQGQTVKIASLGGE-LPKDKETVFWFNVLEIPPKAK---NSTDENLLQLAFRTRIK  141
            R+++K+GQT+KI   G++ LP D+E+VFWFNVLE+PPKA+   NS+ +N LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  142  LFYRPEGLKGSASEAATALTWKIVKNGQQVFAEAKNATPYFVTVNEAFLNTNGRKYELET  201
            LFYRP+GL + A+EA++ LTW++  +  +     +N+TPYFV+ N   L++ G+KY ++ 
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  202  KMIAPDSTQLMKVDGLTTTVNTGKINYTAINDYGGNIKYEASL  244
            +M AP +     +   +TT ++GKINY+ IND+GG I+  ASL
Sbjct  207  QMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

82) Rahaq_3524 in NC_015061


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  196 bits (726),  Expect = 9e-52, Method: Compositional matrix adjust.
 Identities = 110/223 (50%), Positives = 166/223 (75%), Gaps = 5/223 (2%)

Query  26   ADVVISGTRIIYPAQAKEITVKLDNRGEKALLVQSWLDDGREDVNPQEMKIPFLVTPPIS  85
            AD+VISGTRI+Y +  K++ V+L+N+G ++LLVQ+WLD G ++ +P  +K+PF  TPP+S
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  86   RMNAKQGQTVKIASLGGE-LPKDKETVFWFNVLEIPPKAK---NSTDENLLQLAFRTRIK  141
            R+++K+GQT+KI   G++ LP D+E+VFWFNVLE+PPKA+   NS+ +N LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  142  LFYRPEGLKGSASEAATALTWKIVKNGQQVFAEAKNATPYFVTVNEAFLNTNGRKYELET  201
            LFYRP+GL + A+EA++ LTW++  +  +     +N+TPYFV+ N   L++ G+KY ++ 
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  202  KMIAPDSTQLMKVDGLTTTVNTGKINYTAINDYGGNIKYEASL  244
            +M AP +     +   +TT ++GKINY+ IND+GG I+  ASL
Sbjct  207  QMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

83) SEEH1578_10005 in NC_021810


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  195 bits (724),  Expect = 2e-51, Method: Compositional matrix adjust.
 Identities = 111/223 (50%), Positives = 158/223 (71%), Gaps = 2/223 (0%)

Query  30   ADIVISGTRIVYPASSKDVIVNLDNRGNKPLLVQTWLDDGRDGVDPQELKLPFVITPPVS  89
            ADIVISGTRIVY ++ KDV V L+N+G++PLLVQTWLD G D  +P  +K+PF  TPPVS
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  90   RIDPQKGQSLRITYMGS-ALPQDRESLFWFNVLEIPPKS-KAKEGESLNQLQLAFRTRIK  147
            RIDP+KGQ+++I Y GS +LP DRES+FWFNVLE+PPK+ K  ++ + N LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  148  LFFRPDGLKGTPGDAAANLKWSQKKEGNTLSLFAQNDSAYNVSISNVKLKVGGKEYTVDS  207
            LF+RP+GL + +G+A+A+L W  K E     +  +N ++Y VS++++ L   GK Y VD+
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  208  KSVLPFSGVSMPVKGLSNNINGTVIYNTINDNGGTNKREAKID  250
            +   P++  S  +K  +   +G + Y+ IND GG  +  A ++
Sbjct  207  QMAAPLTETSFTLKTATTTSSGKINYSFINDFGGIINATASLQ  249

84) SU5_0827 in NC_017623


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  195 bits (724),  Expect = 2e-51, Method: Compositional matrix adjust.
 Identities = 111/223 (50%), Positives = 158/223 (71%), Gaps = 2/223 (0%)

Query  30   ADIVISGTRIVYPASSKDVIVNLDNRGNKPLLVQTWLDDGRDGVDPQELKLPFVITPPVS  89
            ADIVISGTRIVY ++ KDV V L+N+G++PLLVQTWLD G D  +P  +K+PF  TPPVS
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  90   RIDPQKGQSLRITYMGS-ALPQDRESLFWFNVLEIPPKS-KAKEGESLNQLQLAFRTRIK  147
            RIDP+KGQ+++I Y GS +LP DRES+FWFNVLE+PPK+ K  ++ + N LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  148  LFFRPDGLKGTPGDAAANLKWSQKKEGNTLSLFAQNDSAYNVSISNVKLKVGGKEYTVDS  207
            LF+RP+GL + +G+A+A+L W  K E     +  +N ++Y VS++++ L   GK Y VD+
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  208  KSVLPFSGVSMPVKGLSNNINGTVIYNTINDNGGTNKREAKID  250
            +   P++  S  +K  +   +G + Y+ IND GG  +  A ++
Sbjct  207  QMAAPLTETSFTLKTATTTSSGKINYSFINDFGGIINATASLQ  249

85) CFSAN002069_08255 in NC_021812


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  195 bits (724),  Expect = 2e-51, Method: Compositional matrix adjust.
 Identities = 111/223 (50%), Positives = 158/223 (71%), Gaps = 2/223 (0%)

Query  30   ADIVISGTRIVYPASSKDVIVNLDNRGNKPLLVQTWLDDGRDGVDPQELKLPFVITPPVS  89
            ADIVISGTRIVY ++ KDV V L+N+G++PLLVQTWLD G D  +P  +K+PF  TPPVS
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  90   RIDPQKGQSLRITYMGS-ALPQDRESLFWFNVLEIPPKS-KAKEGESLNQLQLAFRTRIK  147
            RIDP+KGQ+++I Y GS +LP DRES+FWFNVLE+PPK+ K  ++ + N LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  148  LFFRPDGLKGTPGDAAANLKWSQKKEGNTLSLFAQNDSAYNVSISNVKLKVGGKEYTVDS  207
            LF+RP+GL + +G+A+A+L W  K E     +  +N ++Y VS++++ L   GK Y VD+
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  208  KSVLPFSGVSMPVKGLSNNINGTVIYNTINDNGGTNKREAKID  250
            +   P++  S  +K  +   +G + Y+ IND GG  +  A ++
Sbjct  207  QMAAPLTETSFTLKTATTTSSGKINYSFINDFGGIINATASLQ  249

86) SeHA_C0210 in NC_011083


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  195 bits (724),  Expect = 2e-51, Method: Compositional matrix adjust.
 Identities = 111/223 (50%), Positives = 158/223 (71%), Gaps = 2/223 (0%)

Query  30   ADIVISGTRIVYPASSKDVIVNLDNRGNKPLLVQTWLDDGRDGVDPQELKLPFVITPPVS  89
            ADIVISGTRIVY ++ KDV V L+N+G++PLLVQTWLD G D  +P  +K+PF  TPPVS
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  90   RIDPQKGQSLRITYMGS-ALPQDRESLFWFNVLEIPPKS-KAKEGESLNQLQLAFRTRIK  147
            RIDP+KGQ+++I Y GS +LP DRES+FWFNVLE+PPK+ K  ++ + N LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  148  LFFRPDGLKGTPGDAAANLKWSQKKEGNTLSLFAQNDSAYNVSISNVKLKVGGKEYTVDS  207
            LF+RP+GL + +G+A+A+L W  K E     +  +N ++Y VS++++ L   GK Y VD+
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  208  KSVLPFSGVSMPVKGLSNNINGTVIYNTINDNGGTNKREAKID  250
            +   P++  S  +K  +   +G + Y+ IND GG  +  A ++
Sbjct  207  QMAAPLTETSFTLKTATTTSSGKINYSFINDFGGIINATASLQ  249

87) ecpD in NC_007974


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  194 bits (720),  Expect = 3e-51, Method: Compositional matrix adjust.
 Identities = 114/225 (51%), Positives = 160/225 (72%), Gaps = 12/225 (5%)

Query  31   ASVVLAGTRVIFNANERETTVRLSNEGKVPALTQVWLDKGDPKAAPSEISVPFTVTPPVS  90
            A +V++GTR+++ + +++  VRL N G  P L Q WLD G+ ++ P+ I VPF  TPPVS
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  91   RIDPGKGQTLRIFYTG-EALPRDKESVFWLNVLEIPP-----EASGEANKLQLAFRTRIK  144
            RIDP KGQT++I YTG ++LP D+ESVFW+NVLE+PP     E S+  N LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  145  LFFRPAGLAGTAQDAPAKTEWRLL--PGGKQVQVRNPTPYFISFSAFEIEGNGKSVKF-D  201
            LF+RP GL++ A +APAK  WR+    G   V V NPTPYF+SF+++E+E+ GK  K+  
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGK--KYIV  204

Query  202  DGGMVGPGDTQVFALNTAATPAPGLKVHYHAISDFGGAIDGEAAL  246
            DG M +P     F+L+TA+T ++G K++Y  I+DFGG I++ A+L
Sbjct  205  DGQMAAPLTETSFTLKTATTTSSG-KINYSFINDFGGIINATASL  248

88) ecpD in NC_010530


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  194 bits (719),  Expect = 4e-51, Method: Compositional matrix adjust.
 Identities = 108/241 (45%), Positives = 167/241 (70%), Gaps = 10/241 (4%)

Query  11   VVALG--LLSAVYAQASVVIAGTRVIYRAQETETTIKLTNEGKTPALTQVWIDKGDAKAA  68
            V++L   LLS V A A +VI+GTR++YR+ + +  ++L N G  P L Q W+D G+ ++ 
Sbjct  13   VITLTGTLLSNV-AWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTE  71

Query  69   PAAIEVPFTVMPPVARIDPGKGQTLRILYTG-EPLAQDRETVFWLNVLEIPPKPGPDQAD  127
            P+AI VPF   PPV+RIDP KGQT++I+YTG + L+ DRE+VFW+NVLE+PPK+  ++  
Sbjct  72   PGAIKVPFNATPPVSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENS  131

Query  128  A--NKLQLAFRSRIKLFFRPAGLKGTADEAPGMIRWRIVQSGGKPALEGSNPSAYHVSFS  185
            A  N LQ AFR+RIKLF+RP GL + A+EAP+ + WR+ +  GK+ +  +NP++Y VSF+
Sbjct  132  AAQNTLQSAFRTRIKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFN  191

Query  186  RIELAAGGRTARY-EDGGMIGPGETRSFPLTGEVAQGPDARVRFNTINDYGGSAHGEAAL  244
             IEL + G+  +Y  DG M +P    SF L    + ++ +++ ++ IND+GG  ++ A+L
Sbjct  192  SIELESTGK--KYIVDGQMAAPLTETSFTLKTATTTSS-GKINYSFINDFGGIINATASL  248

Query  245  D  245
            +
Sbjct  249  Q  249

89) bgla_2g19000 in NC_015376


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  193 bits (718),  Expect = 4e-51, Method: Compositional matrix adjust.
 Identities = 98/224 (44%), Positives = 165/224 (74%), Gaps = 5/224 (2%)

Query  28   ASVVIGGTRVIYGASEPEVTIKLSNEGQAPALVQSWVDAGDVKSAPSTTKVPFVVTPPIS  87
            A +VI+GTR++Y +++ +V ++L N G  P LVQ+W+D+G+ ++ P++ KVPF  TPP+S
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  88   RIDPSKSQTLRIVYTG-EPLPKDRESVFWLDVLEVPPKPSAAE--ADMNRIQLAFRSRIK  144
            RIDP K+QT++I+YTG + LP DRESVFW++VLEVPPK++  E  A  N +Q AFR+RIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  145  LFYRPDNLKGKSADAPSQLAWRLTQVDGKPALEARNPTPYYVSVIGITLQSGARKATADD  204
            LFYRP+ L + +++AP++L+WR+ + +GK+ +   NPTPY+VS  +I L+S ++K   D+
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  205  SGMIGPGETHAFPLSGDALEAAGASVHYTTLNDYGASVDGDTPL  248
              M +P    +F L   +  ++++ ++Y+ +ND+G+ +++ ++L
Sbjct  207  Q-MAAPLTETSFTLKTAT-TTSSGKINYSFINDFGGIINATASL  248

90) KOX_11195 in NC_016612


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  193 bits (715),  Expect = 7e-51, Method: Compositional matrix adjust.
 Identities = 111/225 (50%), Positives = 165/225 (74%), Gaps = 8/225 (3%)

Query  24   ARADIVISGTRIIYPQSSKDVTVKMENRGNNPLLVQSWLDDGRDTVNPQELKLPFVVTPP  83
            A+ADIVISGTRI+Y  + KDV V++EN+G+ PLLVQ+WLD G D  +P  +K+PF  TPP
Sbjct  25   AWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPP  84

Query  84   VSRIDPSKGQTVRITWT-QQPLAQDRESLFWFNVLEVPPKAK---DADSQNALQLAFRTR  139
            VSRIDP KGQT++I  T  Q L+ DRES+FWFNVLEVPPKA+   ++ +QN+LQ AFRTR
Sbjct  85   VSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTR  144

Query  140  IKMFFRPDGLQGDPAVAAGNLQWT---QQGTALIA-NNSSPYYISMAKATITVKGKKIEV  195
            IK+F+RP+GL + ++ A+++L W    +QG ++++ NN++PY++S     +   GKK  V
Sbjct  145  IKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIV  204

Query  196  DSHTIPPLSHETIPVKNAPALQGGGIEYIAINDFGGTEKHQATIN  240
            D++  +PL++ ++ +K A +  +G I+Y  INDFGG  +  A+++
Sbjct  205  DGQMAAPLTETSFTLKTATTTSSGKINYSFINDFGGIINATASLQ  249

91) CFSAN002050_07420 in NC_021818


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  193 bits (715),  Expect = 8e-51, Method: Compositional matrix adjust.
 Identities = 110/223 (50%), Positives = 158/223 (71%), Gaps = 2/223 (0%)

Query  30   ADIVISGTRIVYPASSKDVIVNLDNRGNKPLLVQTWLDDGRDGVDPQELKLPFVITPPVS  89
            ADIVISGTRIVY ++ KDV V L+N+G++PLLVQTWLD G D  +P  +K+PF  TPPVS
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  90   RIDPQKGQSLRITYMGS-ALPQDRESLFWFNVLEIPPKS-KAKEGESLNQLQLAFRTRIK  147
            RIDP+KGQ+++I Y GS +LP DRES+FWFNVLE+PPK+ K  ++ + N LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  148  LFFRPDGLKGTPGDAAANLKWSQKKEGNTLSLFAQNDSAYNVSISNVKFKVGGKEYTVDS  207
            LF+RP+GL + +G+A+A+L W  K E     +  +N ++Y VS++++ +   GK Y VD+
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  208  KSVLPFSGVSMPVKGLSNNINGTVIYNTINDNGGTNKREAKID  250
            +   P++  S  +K  +   +G + Y+ IND GG  +  A ++
Sbjct  207  QMAAPLTETSFTLKTATTTSSGKINYSFINDFGGIINATASLQ  249

92) Rahaq2_0706 in NC_016818


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  193 bits (715),  Expect = 8e-51, Method: Compositional matrix adjust.
 Identities = 108/223 (49%), Positives = 164/223 (74%), Gaps = 4/223 (1%)

Query  24   ADLVLSGTRVIFPAEKKDVTVQLTNKGTHPLLAQSWIDAGDPSARPESVDVPFYLTPPVS  83
            AD+V+SGTR+++ + +KDV V+L NKG++PLL Q+W+D+G+ ++ P ++ VPF  TPPVS
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  84   RIDPEKGQTLRIVYNQPK-LPKDRESVFWLNVLEIPAKAKKGESSEVDNTLQLAFRTRVK  142
            RIDP KGQT++I+Y  ++ LP DRESVFW+NVLE+P+KA+K E+S  +NTLQ AFRTR+K
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  143  IFYRPTGLKSQPNLAAKDVIWSK---VGTNKIKANNPTPYYISYSAVNLSSGAKKVELGD  199
            +FYRP GL   +  A+  + W      G + +  NNPTPY++S+++++L S +KK  +++
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  200  AMLAPFSTTELQSKQNINENSWAINYAFINDYGGSENGNAALK  242
             M AP++ T +  K     +S  INY+FIND+GG  N+ A+L+
Sbjct  207  QMAAPLTETSFTLKTATTTSSGKINYSFINDFGGIINATASLQ  249

93) Bxe_B2971 in NC_007952


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  192 bits (712),  Expect = 1e-50, Method: Compositional matrix adjust.
 Identities = 107/239 (45%), Positives = 175/239 (74%), Gaps = 8/239 (3%)

Query  11   IGFACALLAGSAQASVTIGGTRVVYPLEQREVTVKLDNDSKTPSLVQAWIDDGNADAKPG  70
            I ++ +LL+  A A + I+GTR+VY   Q++V V+L+N +  P LVQ+W+D GN ++ PG
Sbjct  14   ITLTGTLLSNVAWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPG  73

Query  71   EIKVPFVITPPIFRMDAKKGQTLRVMYTG-EPLPQDRESVYWLNVLDIPPKAS---SATE  126
             IKVPF  TPP+ R+D+KKGQT+++MYTG + LP DRESV+W+NVL++PPKA+   +++ 
Sbjct  74   AIKVPFNATPPVSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAA  133

Query  127  VNSLSLAYRTRIKVFARPAGLPGKPEDAAAQLSWKIAASADGKSHALSVSNPTPYYVSFS  186
             N+L  A+RTRIK+F RP GL + + +A+A+L+W++    +GKS  ++V+NPTPY+VSF+
Sbjct  134  QNTLQSAFRTRIKLFYRPQGLGDLAGEAPAKLTWRM-KHEQGKS-VVTVNNPTPYFVSFN  191

Query  187  EIDVESNGHTFRNEQGGMVAPRASAVLPIAKMNAVAAGAKVHYIAISDYGGPIDGDAAL  245
             I++ES G  +  + G M AP + + + + K  + ++++K++Y  I+D+GG I++ A+L
Sbjct  192  SIELESTGKKYIVD-GQMAAPLTETSFTL-KTATTTSSGKINYSFINDFGGIINATASL  248

94) Rahaq2_3604 in NC_016818


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  192 bits (712),  Expect = 1e-50, Method: Compositional matrix adjust.
 Identities = 104/236 (45%), Positives = 170/236 (73%), Gaps = 6/236 (2%)

Query  14   LAMLGFIASDVS-ADVVISGTRVIYPAQAKEVTVKLDNRGEKALLVQAWMDDGREDINPQ  72
            +++ G + S+V+ AD+VISGTR++Y +  K+V V+L+N+G ++LLVQ+W+D G ++ +P 
Sbjct  14   ITLTGTLLSNVAWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPG  73

Query  73   EMKIPFLVTPPISRMNAKQGQTVKIASLDAD-LPKDKESVFWFNVLEIPPKAK---NTSD  128
             +K+PF  TPP+SR+++K+GQT+KI   +++ LP D+ESVFWFNVLE+PPKA+   N++ 
Sbjct  74   AIKVPFNATPPVSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAA  133

Query  129  ENLLQLAFRTRIKLFYRPEGLKGSSSEAATALTWKIIKKDKQVFAEVKNASPYFVTVNEA  188
            +N LQ AFRTRIKLFYRP+GL + ++EA++ LTW++   + +    V+N++PYFV+ N  
Sbjct  134  QNTLQSAFRTRIKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSI  193

Query  189  TLNANNSQYAIEKNMISPASIKLMKVEGLSNPVSAGKITYSAISDYGGNITHAFSL  244
             L++   +Y ++ +M +P +     +   +   S+GKI YS I+D+GG I  + SL
Sbjct  194  ELESTGKKYIVDGQMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

95) bgla_1p0210 in NC_015382


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  190 bits (704),  Expect = 6e-50, Method: Compositional matrix adjust.
 Identities = 97/229 (43%), Positives = 164/229 (72%), Gaps = 5/229 (2%)

Query  23   TVAQASVVIGGTRIIYGSSEPEVTIKLSNEGQSPALVQSWVDAGDVKSAPSTTKVPFVVT  82
             VA A +VI+GTRI+Y +++ +V ++L N G  P LVQ+W+D+G+ ++ P++ KVPF  T
Sbjct  23   NVAWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNAT  82

Query  83   PPISRIDPSKSQTLRIVYTG-EPLPKDRESVFWLDVLEVPPKPSAAD--ADMNRIQLAFR  139
            PP+SRIDP K+QT++I+YTG + LP DRESVFW++VLEVPPK++  +  A  N +Q AFR
Sbjct  83   PPVSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFR  142

Query  140  SRIKLFYRPDNLKGKSADAPSRLGWRLTQADGKPAIEAQNPTPFYVSLTRITVQANDLSA  199
            +RIKLFYRP+ L + +++AP++L WR+ + +GK+ +  +NPTP++VS+  I +++ +   
Sbjct  143  TRIKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTG-KK  201

Query  200  NVDDVGMVGPGETRVFPLTGEVPNAANASVHFSTLNDYGGSVDSETPLR  248
             + D  M +P     F L      ++++ +++S +ND+GG +++ ++L+
Sbjct  202  YIVDGQMAAPLTETSFTLKTA-TTTSSGKINYSFINDFGGIINATASLQ  249

96) ECENHK_04120 in NC_018405


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  188 bits (697),  Expect = 2e-49, Method: Compositional matrix adjust.
 Identities = 116/223 (53%), Positives = 159/223 (72%), Gaps = 2/223 (0%)

Query  27   ADIVISGTRIVYPESSKDVIVNLDNRGAKPLLVQSWLDDGRDEKSPEELKLPFVITPPVS  86
            ADIVISGTRIVY  + KDV V L+N+G++PLLVQ+WLD G D+  P  +K+PF  TPPVS
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  87   RIDPKQGQSLRITYMG-QSLPKDRESLFWFNVLEIPPKP-KNANAENTNQLQLAFRTRIK  144
            RIDPK+GQ+++I Y G Q+LP DRES+FWFNVLE+PPK+ KN N+   N LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  145  FFFRPDGLKGSALEAADHVTWTMKKDGNGVSLVAHNESPYNVAISMVKLKSGQKTYEVAH  204
            +F+RP+GL + A EA+  +TW MK +     +  +N +PY V+++ + L S  K Y V  
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  205  QSVLPFSEKAMlvkgltttttgkvAYETINDNGGVDNHETTLK  247
            Q   P++E +  +K  TTT++GK+ Y  IND GG+ N  ++L+
Sbjct  207  QMAAPLTETSFTLKTATTTSSGKINYSFINDFGGIINATASLQ  249

97) BamMC406_3033 in NC_010551


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  186 bits (688),  Expect = 1e-48, Method: Compositional matrix adjust.
 Identities = 105/226 (47%), Positives = 164/226 (73%), Gaps = 9/226 (3%)

Query  24   AAIVITGTRVVYPEQNREVNVRLANVETAPVLVQAWVDDGRADANPDEIKVPFVLMPPVF  83
            A IVI+GTR+VY   +++VNVRL N  + P+LVQ+W+D G  +++P+ IKVPF   PPV 
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  84   RVEPQKGQTLRIMYTGTD-LPADRESVFWLNVQEIPPKPTNAEET---NLLQLAFRTRIK  139
            R++P+KGQT++IMYTG++ LP+DRESVFW+NV E+PPK+ + E++   N LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  140  LFFRPVALQD--GPSGQLLKWQVAHGDKGQSVLRVDNPSPYYVSFSRVALKAGDTEIQFD  197
            LF+RP +L D  G +   L W++ H ++G+SV+ V+NP+PY+VSF+ + L + +     D
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKH-EQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVD  205

Query  198  PAMVPPFDHVSFTQPQGAHRTFARGTVSYKLLNDYGAEVVGTATVQ  243
              M +P+ + SFT   ++  T + G ++Y ++ND+G+ + +TA++Q
Sbjct  206  GQMAAPLTETSFTLKTAT--TTSSGKINYSFINDFGGIINATASLQ  249

98) BamMC406_6637 in NC_010553


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  186 bits (688),  Expect = 1e-48, Method: Compositional matrix adjust.
 Identities = 98/225 (44%), Positives = 158/225 (71%), Gaps = 8/225 (3%)

Query  30   VVVSATRVVYSSDSREVSVRLTNEGGSPVLVQTWLDTGDEAAKPEALQVPFTLAPPVFRM  89
            +V+S+TR+VY +  ++V+VRL N G+ P+LVQTWLDTG++ + P A++VPF  +PPV R+
Sbjct  29   IVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVSRI  88

Query  90   NPGRGQTIRMMYT-KEPLPQDRETVFWLNVLEIPPKVKGADGA---NHLQVAFRSRIKVF  145
            +P +GQTI++MYT  + LP DRE+VFW+NVLE+PPK +  + +   N LQ AFR+RIK+F
Sbjct  89   DPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIKLF  148

Query  146  FRPKGLAGTPDEAPSKVIWSVVPMSDGGGYGLKATNPTPYAVSYGKVSLESGGQSLEAQS  205
            +RP+GL++ ++EAP+K+ W +    + G   +   NPTPY VS+  + LES G+    ++
Sbjct  149  YRPQGLGDLAGEAPAKLTWRM--KHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  206  TMVLPDTSRVFPLTGGKGRPSGGAKVSYQYIDDFGAVRDGSSVVN  250
             M  P T   F L  +   +SG  K++Y +I+DFG++ ++++ ++
Sbjct  207  QMAAPLTETSFTLKTATTTSSG--KINYSFINDFGGIINATASLQ  249

99) BRPE64_ACDS16460 in NC_021287


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  185 bits (686),  Expect = 2e-48, Method: Compositional matrix adjust.
 Identities = 107/238 (45%), Positives = 171/238 (72%), Gaps = 6/238 (2%)

Query  3    IVLTLGLIPCIQARASVVIAGTRVIYPAGDSEVTLRLSNKGSTAGLVQVWVDRGEEHATP  62
            I LT  L++ + A+A +VI+GTR++Y +++ +V +RL NKGS + LVQ W+D G++++ P
Sbjct  14   ITLTGTLLSNV-AWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEP  72

Query  63   TAIDVPFTVAPPISRIDPGKAQTLRIFYTG-ETLPQDRESVFWLNVLEVPPEPGT--SSP  119
             AI VPF  +PP+SRIDP K+QT++I YTG +TLP DRESVFW+NVLEVPP +    +S+
Sbjct  73   GAIKVPFNATPPVSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSA  132

Query  120  GQNYLQMSVLSRIKLFFRPKGLPGEAESSPGALSWSLKKGEAGWILEVRNDTAYHVSFAG  179
            +QN LQ +  +RIKLF+RP+GL + A  +P+ L+W +K  ++  ++ V N T+Y VSF +
Sbjct  133  AQNTLQSAFRTRIKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNS  192

Query  180  IEVSSSGGHATFDEGGMVAPKSAENFVLHGALSPAADAKVHYRTINDYGGVVEGEAPV  237
            IE+ S+ G   + +G M AP +  +F L  A + ++ +K++Y  IND+GG++++ A++
Sbjct  193  IELEST-GKKYIVDGQMAAPLTETSFTLKTA-TTTSSGKINYSFINDFGGIINATASL  248

100) BamMC406_6668 in NC_010553


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  184 bits (684),  Expect = 2e-48, Method: Compositional matrix adjust.
 Identities = 103/224 (46%), Positives = 160/224 (72%), Gaps = 9/224 (4%)

Query  25   AAIVITGTRVVYPEQSREVNVRLTNIETAPVLVQSWIDDGNSEANPDEIRVPFVLTPPVF  84
            A IVI+GTR+VY    ++VNVRL N  + P+LVQ+W+D GN +++P+ I+VPF  TPPV 
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  85   RADPKKGQTLRVMYTGAD-LPKDRESLFWFNVLEIPPKPTSADE---QNLLQLAFRTRIK  140
            R DPKKGQT+++MYTG++ LP DRES+FWFNVLE+PPK+   ++   QN LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  141  LLFRPVALQE--GPSGELLKWKVVRDEKGRNVLRVDNPSPYYVSFSRVALKVGNEEIQFD  198
            L++RP +L +  G +   L W+ +++E+G++V+ V+NP+PY+VSF+ + L         D
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWR-MKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVD  205

Query  199  PSMAAPFDHMLLVQKPGTARVPVRGTVSYMLLNDYGAEVAGSAT  242
              MAAP+ +  +  K +T+  +  G ++Y ++ND+G+ + ++A+
Sbjct  206  GQMAAPLTETSFTLKTATTTSS--GKINYSFINDFGGIINATAS  247

101) BYI23_B008250 in NC_016625


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  183 bits (678),  Expect = 6e-48, Method: Compositional matrix adjust.
 Identities = 106/242 (44%), Positives = 169/242 (70%), Gaps = 7/242 (2%)

Query  8    LSVVALICAISVLSPEANASVVVSGTRVVYNQSESEVTVKLTNNGKLPGLTKVWLDKGDP  67
            ++V++L  + ++LS  A A +V+SGTR+VY  ++ +V V+L N+G  P L + WLD G+ 
Sbjct  11   FTVITL--TGTLLSNVAWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGND  68

Query  68   DAKPDTIDVPFSISPPIMRIDSGKSQTLRIMFTG-EPLPADKETVFYLNVLEIPPKATGD  126
            ++ P++I VPF+ +PP+ RID+ K+QT++IM+TG + LP+D+E+VF +NVLE+PPKA  +
Sbjct  69   NTEPGAIKVPFNATPPVSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKN  128

Query  127  EASANQ--LQLAFRTRIKFFYRPNGLKPAEPAEAPGQIVWHLKQDAKGASIEATNPTPYH  184
            E SA Q  LQ AFRTRIK+FYRP+GL    ++EAP+++ W++K++   + +   NPTPY 
Sbjct  129  ENSAAQNTLQSAFRTRIKLFYRPQGL-GDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYF  187

Query  185  VSFDRIQVGEGANAPAFEQGGMVNPGETKAFPLKGAVSGSDMKVVYTAINDYGGPQKGDA  244
            VSF+ I++ E++    + +G M  P    +F LK A + S  K+ Y+ IND+GG  ++ A
Sbjct  188  VSFNSIEL-ESTGKKYIVDGQMAAPLTETSFTLKTATTTSSGKINYSFINDFGGIINATA  246

Query  245  KL  246
             L
Sbjct  247  SL  248

102) Reut_A0839 in NC_007347


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  182 bits (674),  Expect = 1e-47, Method: Compositional matrix adjust.
 Identities = 104/242 (43%), Positives = 162/242 (67%), Gaps = 6/242 (2%)

Query  5    IRNVIGACAMTLVLLSH-SHASVVIAGTRVIVHAGDGEATIKLSNEGKSPALTQAWLDTG  63
            +R  +   ++T  LLS+ + A +VI+GTR++ ++++ +  ++L N G  P L Q+WLDTG
Sbjct  7    LRTAFTVITLTGTLLSNVAWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTG  66

Query  64   DASAQPAGIDVPFTVTPPIARIEPGKAQTLRIHYTG-EPLPADKESVFWLSVLEVPPKPG  122
            + +++P++I VPF  TPP++RI+P K+QT++I YTG + LP+D+ESVFW++VLEVPPK+ 
Sbjct  67   NDNTEPGAIKVPFNATPPVSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKAN  126

Query  123  ADEIDA--NKLQLAFRSRIKLFFRPAGLHGEATEAPARVAWRLVKADRGLALEASNPTAY  180
             +E  A  N LQ AFR+RIKLF+RP GL + A EAPA+++WR+   +    +  +NPT+Y
Sbjct  127  KNENSAAQNTLQSAFRTRIKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPY  186

Query  181  HVSFSSVELLDGTHSASNEAGGMVAPGKSMRFPLAGNVDPGKAITVRYQAINDYGGPIDG  240
             VSF+S+E L++T       G M AP     F L      + +  + Y  IND+GG I++
Sbjct  187  FVSFNSIE-LESTGKKYIVDGQMAAPLTETSFTLKTATTTSSG-KINYSFINDFGGIINA  244

Query  241  EA  242
             A
Sbjct  245  TA  246

103) CKO_03232 in NC_009792


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  182 bits (676),  Expect = 9e-48, Method: Compositional matrix adjust.
 Identities = 105/223 (48%), Positives = 154/223 (70%), Gaps = 2/223 (0%)

Query  27   ADVVISGTRIVYQQSMKDVIVNLDNRGKNPLLLQIWLDDGSPNVNPQELKLPFVITPPIS  86
            AD+VISGTRIVY+ + KDV V L+N+G  PLL+Q WLD G+ N +P  +K+PF  TPP+S
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  87   RIDPGKGQSVRVTYL-QQPLPQDRESLFWFNVLEIPKKATAKD-GESQNQLQLAFRTRIK  144
            RIDP KGQ++++ Y   Q LP DRES+FWFNVLE+P KA  ++ + +QN LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  145  LFFRPDGLKGTPGEAMKQVKWSQTRQGNTLSLVGRNDSPYNVSLSSATFKVGAKEYEIDS  204
            LF+RP+GL + +GEA  ++ W   ++     +   N +PY VS++S  +   +K Y +D+
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  205  KSIKPFSSETMTVKGLTNSASGEVVYIAINDFGGTEKLTANVN  247
            +   P++  + T+K  T ++SG + Y  INDFGG  + TA+++
Sbjct  207  QMAAPLTETSFTLKTATTTSSGKINYSFINDFGGIINATASLQ  249

104) BC1002_6259 in NC_014119


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  181 bits (671),  Expect = 2e-47, Method: Compositional matrix adjust.
 Identities = 92/223 (42%), Positives = 164/223 (74%), Gaps = 7/223 (3%)

Query  27   ITITGTRVIYPAQNREVNVRLNNVDSRPVLVQAWLDDGDAAAAPNEIKVPFTLLPAVFRV  86
            I I+GTR++Y + +++VNVRL+N +SRP+LVQ+WLD G+  + P  IKVPF   P+V R+
Sbjct  29   IVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVSRI  88

Query  87   EPHRGQALRIMFAGGD-MPKDRESVYWLNVLEIPPKPKDADD---RNMIQLAFRTRIKMF  142
            +P +GQ+++IM++G++ +P DRESV+W+NVLE+PPK++  ++   +N +Q AFRTRIK+F
Sbjct  89   DPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIKLF  148

Query  143  YRPASLLDDPTAGRAQLKWHVESDDKGQTVVRLDNPSPYFVSVGTAEVETAGSKVALLPD  202
            YRP +L D +  + A+L W++  +++G++VV ++NP+PYFVS  + E+E++G K  +  +
Sbjct  149  YRPQGLGDLAGEAPAKLTWRMK-HEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDGQ  207

Query  203  MAPPFGHVDLRPQDGKLDIKAPATVSFTVLNDFGTAIKDSAEV  245
            MA+P+ +  +  + +     +++ ++++ +NDFG  I+ +A +
Sbjct  208  MAAPLTETSFTLKTA--TTTSSGKINYSFINDFGGIINATASL  248

105) BTH_II0116 in NC_007650


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  180 bits (666),  Expect = 5e-47, Method: Compositional matrix adjust.
 Identities = 102/223 (46%), Positives = 156/223 (70%), Gaps = 8/223 (3%)

Query  21   IVITGTRVVYPESSREVNVRLTNVEQSPVLVQAWIDDGNAGASPDEIKVPFVLMPPVFRV  80
            IVI+GTR+VY  + ++VNVRL N    P+LVQ+W+D GN  + P+ IKVPF   PPV R+
Sbjct  29   IVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVSRI  88

Query  81   EPKKGQTLRVMYTGDD-LPKDRESVYWLNVLEIPPKPTVE---AEQNLLQLAFRTRIKLF  136
            +PKKGQT+++MYTG + LP DRESV+W+NVLE+PPK+  +   A QN LQ AFRTRIKLF
Sbjct  89   DPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIKLF  148

Query  137  FRPSALEDGNAAQARDQLTWKVVRNDKGVTVLRAENRSPYYISLSQVTAKSGEKSTQFDP  196
            +RP +L D  A++A  +LTW+ +++++G +V+  +N +PY++S++ +   S  K    D 
Sbjct  149  YRPQGLGD-LAGEAPAKLTWR-MKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  197  GMVSPFGSRDFVSKRDTSTLSAHAEISYKLLNDYGAEVAGTAT  239
             M +P+    F  K  T+T  + + I+Y ++ND+G+ + +TA+
Sbjct  207  QMAAPLTETSFTLKTATTT--SSGKINYSFINDFGGIINATAS  247

106) fimC in NC_007974


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  179 bits (664),  Expect = 7e-47, Method: Compositional matrix adjust.
 Identities = 100/231 (44%), Positives = 154/231 (67%), Gaps = 5/231 (2%)

Query  3    LTGSAAHASVVLGGTRVILDEKDKEATIRASNEGNTPALIQTWVDKGDPKASPTSIEVPF  62
            L ++ A A +V++GTR++    +K+  +R  N G+ P L+QTW+D G+ ++ P +I VPF
Sbjct  20   LLSNVAWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPF  79

Query  63   TVMPPVARIDPSKGQTLRVLYTG-EPLPTDKESVFWLNVLEIPPKA--TGDLAEANRLQL  119
               PPV+RIDP KGQT++++YTG + LP+D+ESVFW+NVLE+PPKA    + A  N LQ 
Sbjct  80   NATPPVSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQS  139

Query  120  AFRTRVKLFYRPTGLVGTAAEAPSRVTWRIKPAGKTLALEATNPTGYHVSYAGMDVSAGG  179
            AFRTR+KLFYRP GL + A+EAP+++TWR+K       +   NPT Y VS+ ++++ + G
Sbjct  140  AFRTRIKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTG  199

Query  180  KTVRNQEGGMIGPGETKTFPLDGEAGLGANGSVHYRAINDWGGPIEGDAPV  230
            K     +G M +P    +F L   +   ++G ++Y  IND GG I++ A++
Sbjct  200  KKY-IVDGQMAAPLTETSFTLKTATT-TSSGKINYSFINDFGGIINATASL  248

107) BURPS668_A0151 in NC_009075


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  178 bits (661),  Expect = 1e-46, Method: Compositional matrix adjust.
 Identities = 104/234 (45%), Positives = 160/234 (69%), Gaps = 8/234 (3%)

Query  7    LASTLSQAAIVITGTRVVYPESSREVNVRLNNVEQSPVLVQAWIDDGNAGASPDEIKVPF  66
            L S ++ A IVI+GTR+VY  + ++VNVRL+N    P+LVQ+W+D GN  + P+ IKVPF
Sbjct  20   LLSNVAWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPF  79

Query  67   VLMPPVFRVEPKKGQTLRVMYTGDD-LPKDRESVYWLNVLEIPPKPTVE---AEQNLLQL  122
               PPV R++PKKGQT+++MYTG + LP DRESV+W+NVLE+PPK+  +   A QN LQ 
Sbjct  80   NATPPVSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQS  139

Query  123  AFRTRIKLFFRPSALEDGNAAQARDQLKWKIVRNEKGVSVLRAENRSPYYISISQATAKS  182
            AFRTRIKLF+RP +L D  A++A  +L W++ ++E+G SV+  +N +PY++S++     S
Sbjct  140  AFRTRIKLFYRPQGLGD-LAGEAPAKLTWRM-KHEQGKSVVTVNNPTPYFVSFNSIELES  197

Query  183  GDKSVQFDPGMVPPFGSKEFVSKHDISTLSTHAEIAYKLLNDYGAEVAGSATAE  236
             +K    D  M +P+    F  K   +T  + + I Y ++ND+G+ + ++A+ +
Sbjct  198  TGKKYIVDGQMAAPLTETSFTLKTATTT--SSGKINYSFINDFGGIINATASLQ  249

108) BPC006_II0124 in NC_018529


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  178 bits (658),  Expect = 2e-46, Method: Compositional matrix adjust.
 Identities = 102/227 (45%), Positives = 156/227 (69%), Gaps = 8/227 (3%)

Query  4    AAIVITGTRVVYPESSREVNVRLNNVEQSPVLVQAWIDDGNAGASPDEIKVPFVLMPPVF  63
            A IVI+GTR+VY  + ++VNVRL+N    P+LVQ+W+D GN  + P+ IKVPF   PPV 
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  64   RVEPKKGQTLRVMYTGDD-LPKDRESVYWLNVLEIPPKPTVE---AEQNLLQLAFRTRIK  119
            R++PKKGQT+++MYTG + LP DRESV+W+NVLE+PPK+  +   A QN LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  120  LFFRPSALEDGNAAQARDQLKWKIVRNEKGVSVLRAENRSPYYISISQATAKSGDKSVQF  179
            LF+RP +L D  A++A  +L W++ ++E+G SV+  +N +PY++S++     S +K    
Sbjct  147  LFYRPQGLGD-LAGEAPAKLTWRM-KHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIV  204

Query  180  DPGMVPPFGSKEFVSKHDISTLSTHAEIAYKLLNDYGAEVAGSATAE  226
            D  M +P+    F  K   +T  + + I Y ++ND+G+ + ++A+ +
Sbjct  205  DGQMAAPLTETSFTLKTATTT--SSGKINYSFINDFGGIINATASLQ  249

109) YPTS_2766 in NC_010634


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  177 bits (656),  Expect = 3e-46, Method: Compositional matrix adjust.
 Identities = 97/236 (42%), Positives = 165/236 (70%), Gaps = 7/236 (2%)

Query  6    VILVLSLTISSIPAFAAMTISGTRVIFPAAEKEVSIRTNNKGVQPALVQVWVDDGKTNAN  65
             ++ L+ T+ S  A A + ISGTR+++ +A+K+V++R +NKG +P LVQ W+D G+ N++
Sbjct  12   TVITLTGTLLSNVAWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTE  71

Query  66   INSMKLPFMVTPPVFRVEPGKGQTVRMIYNG-MALPQNKESVFWFNMLEIPA---VKKEG  121
              ++K+PF  TPPV R++P KGQT++++Y G  +LP ++ESVFWFN+LE+P+    + ++
Sbjct  72   PGAIKVPFNATPPVSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENS  131

Query  122  NTQNKLELAFRTRIKVFYRPTSLESNSAAQSAQLKWTLVDDNQKGRGVKVVNPTPYYISF  181
             +QN L+ AFRTRIK+FYRP +L   ++  +A+L W + +++ K+  V V NPTPY++SF
Sbjct  132  AAQNTLQSAFRTRIKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKS-VVTVNNPTPYFVSF  190

Query  182  DSGSITVGAKSVEIITDMVPPFSEKMFFPKLKLLGSTSISKMNYKILNDYGAAIDE  237
            +S  +   +K   +  +M +P++E  F   LK   +TS +K+NY ++ND+G+ I+ 
Sbjct  191  NSIELESTGKKYIVDGQMAAPLTETSF--TLKTATTTSSGKINYSFINDFGGIINA  244

110) staB in NC_007435


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  177 bits (654),  Expect = 5e-46, Method: Compositional matrix adjust.
 Identities = 101/225 (45%), Positives = 155/225 (69%), Gaps = 8/225 (3%)

Query  20   IVITGTRVVYPESSREVNVRLNNVEQSPVLVQAWIDDGNAGASPDEIKVPFVLMPPVFRV  79
            IVI+GTR+VY  + ++VNVRL+N    P+LVQ+W+D GN  + P+ IKVPF   PPV R+
Sbjct  29   IVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVSRI  88

Query  80   EPKKGQTLRVMYTGDD-LPKDRESVYWLNVLEIPPKPTVE---AEQNLLQLAFRTRIKLF  135
            +PKKGQT+++MYTG + LP DRESV+W+NVLE+PPK+  +   A QN LQ AFRTRIKLF
Sbjct  89   DPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIKLF  148

Query  136  FRPSALEDGNAAQARDQLKWKIVRNEKGVSVLRAENRSPYYISISQATAKSGDKSVQFDP  195
            +RP +L D  A++A  +L W++ ++E+G SV+  +N +PY++S++     S +K    D 
Sbjct  149  YRPQGLGD-LAGEAPAKLTWRM-KHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  196  GMVPPFGSKEFVSKHDISTLSTHAEIAYKLLNDYGAEVAGSATAE  240
             M +P+    F  K   +T  + + I Y ++ND+G+ + ++A+ +
Sbjct  207  QMAAPLTETSFTLKTATTT--SSGKINYSFINDFGGIINATASLQ  249

111) BYI23_B003330 in NC_016625


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  177 bits (654),  Expect = 5e-46, Method: Compositional matrix adjust.
 Identities = 98/240 (41%), Positives = 161/240 (68%), Gaps = 7/240 (2%)

Query  5    IAAIGLMIATFGGAAHASVTIGGTRVVYPLDQREVTVKLNNDSRTPSLVQVWMDDGNADT  64
            ++ I L  + ++  A A + I+GTR+VY   Q++V V+L+N +  P LVQ W+D GN +T
Sbjct  11   FTVITLTGTLLSNVAWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNT  70

Query  65   KPAESKTPFVITPPIFRMDANKSQTLRVMFSG-EALPQDRESIYWLNVLDVPPKA---EA  120
             P+  K PF  TPP+ R+D++K+QT+++M++G ++LP DRES++W+NVL+VPPKA   E 
Sbjct  71   EPGAIKVPFNATPPVSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNEN  130

Query  121  NPDVNTLQLAYRTRIKVFVRPPKLPGKPEDAPRMLDWKIVPAAQGGGNALAVSNPTAYYV  180
            ++  NTLQ A+RTRIK+F RP  L + + +AP  L W++    + G + ++V+NPT+Y+V
Sbjct  131  SAAQNTLQSAFRTRIKLFYRPQGLGDLAGEAPAKLTWRM--KHEQGKSVVTVNNPTPYFV  188

Query  181  SFSEIQVTVNGRSYKNETGGMVAPHGKEIIAIPKMSGVHAGKVHYIAISDFGGAIEGDAD  240
            SF+ I++   G+ Y  + G M AP     +++   +   +GK++Y  I+DFGG I++ A 
Sbjct  189  SFNSIELESTGKKYIVD-GQMAAPLTETSFTLKTATTTSSGKINYSFINDFGGIINATAS  247

112) Reut_A1695 in NC_007347


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  176 bits (652),  Expect = 7e-46, Method: Compositional matrix adjust.
 Identities = 105/225 (47%), Positives = 161/225 (72%), Gaps = 5/225 (2%)

Query  33   GSVVIAGTRAVYNARDREVTIKLTNEGNAPALVQSWFDKGDPAAPPASIGVPFVLTPPVA  92
            + +VI+GTR VY + +++V ++L N G+ P LVQ+W+D G+  + P++I VPF  TPPV+
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  93   RIDPGKGQSLRIVYTG-EPLPEDRESVFWLNVLEIPPKPNAEQTGP--NKLQLAFRSRIK  149
            RIDP KGQ+++I+YTG + LP DRESVFW+NVLE+PPK+N ++ ++  N LQ AFR+RIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  150  FFYRPEGLKGTPGEAPAKLVWRLARTDGRLLIECHNPTAFHvsvvsvelssGGKRAVNER  209
            +FYRP+GL + +GEAPAKL WR+ + +G+ ++  +NPT++ VS  S+EL S GK+ + + 
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVD-  205

Query  210  GAMVAPGETRQFPLIGDVPSVPGTKVRYHTLNDWGSSNDGEAPLD  254
            G M AP     F L     + +G K+ Y  +ND G+  ++ A+L+
Sbjct  206  GQMAAPLTETSFTLKTATTTSSG-KINYSFINDFGGIINATASLQ  249

113) BDL_5928 in NC_021877


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  176 bits (652),  Expect = 7e-46, Method: Compositional matrix adjust.
 Identities = 101/223 (46%), Positives = 154/223 (70%), Gaps = 8/223 (3%)

Query  25   IVITGTRVVYPESSREVNVRLNNVEQSPVLVQAWIDDGNAGASPDEIKVPFVLMPPVFRV  84
            IVI+GTR+VY  + ++VNVRL+N    P+LVQ+W+D GN  + P+ IKVPF   PPV R+
Sbjct  29   IVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVSRI  88

Query  85   EPKKGQTLRVMYTGDD-LPKDRESVYWLNVLEIPPKPTVE---AEQNLLQLAFRTRIKLF  140
            +PKKGQT+++MYTG + LP DRESV+W+NVLE+PPK+  +   A QN LQ AFRTRIKLF
Sbjct  89   DPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIKLF  148

Query  141  FRPSALEDGNAAQARDQLKWKIVRNEKGVSVLRAENRSPYYISISQATAKSGDKSVQFDP  200
            +RP +L D  A++A  +L W++ ++E+G SV+  +N +PY++S++     S +K    D 
Sbjct  149  YRPQGLGD-LAGEAPAKLTWRM-KHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  201  GMVPPFGSKEFVSKHDISTLSTHAEIAYKLLNDYGAEVAGSAT  243
             M +P+    F  K   +T  + + I Y ++ND+G+ + ++A+
Sbjct  207  QMAAPLTETSFTLKTATTT--SSGKINYSFINDFGGIINATAS  247

114) BP1026B_II0099 in NC_017832


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  176 bits (651),  Expect = 8e-46, Method: Compositional matrix adjust.
 Identities = 101/223 (46%), Positives = 154/223 (70%), Gaps = 8/223 (3%)

Query  25   IVITGTRVVYPESSREVNVRLNNVEQSPVLVQAWIDDGNAGASPDEIKVPFILMPPVFRV  84
            IVI+GTR+VY  + ++VNVRL+N    P+LVQ+W+D GN  + P+ IKVPF   PPV R+
Sbjct  29   IVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVSRI  88

Query  85   EPKKGQTLRVMYTGDD-LPKDRESVYWLNVLEIPPKPTVE---AEQNLLQLAFRTRIKLF  140
            +PKKGQT+++MYTG + LP DRESV+W+NVLE+PPK+  +   A QN LQ AFRTRIKLF
Sbjct  89   DPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIKLF  148

Query  141  FRPSALEDGNAAQARDQLKWKIVRNEKGVSVLRAENRSPYYISISQATAKSGDKSVQFDP  200
            +RP +L D  A++A  +L W++ ++E+G SV+  +N +PY++S++     S +K    D 
Sbjct  149  YRPQGLGD-LAGEAPAKLTWRM-KHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  201  GMVPPFGSKEFVSKHDISTLSTHAEIAYKLLNDYGAEVAGSAT  243
             M +P+    F  K   +T  + + I Y ++ND+G+ + ++A+
Sbjct  207  QMAAPLTETSFTLKTATTT--SSGKINYSFINDFGGIINATAS  247

115) BURPS1106A_A0127 in NC_009078


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  176 bits (651),  Expect = 8e-46, Method: Compositional matrix adjust.
 Identities = 101/223 (46%), Positives = 154/223 (70%), Gaps = 8/223 (3%)

Query  25   IVITGTRVVYPESSREVNVRLNNVEQSPVLVQAWIDDGNAGASPDEIKVPFVLMPPVFRV  84
            IVI+GTR+VY  + ++VNVRL+N    P+LVQ+W+D GN  + P+ IKVPF   PPV R+
Sbjct  29   IVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVSRI  88

Query  85   EPKKGQTLRVMYTGDD-LPKDRESVYWLNVLEIPPKPTVE---AEQNLLQLAFRTRIKLF  140
            +PKKGQT+++MYTG + LP DRESV+W+NVLE+PPK+  +   A QN LQ AFRTRIKLF
Sbjct  89   DPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIKLF  148

Query  141  FRPSALEDGNAAQARDQLKWKIVRNEKGVSVLRAENRSPYYISISQATAKSGDKSVQFDP  200
            +RP +L D  A++A  +L W++ ++E+G SV+  +N +PY++S++     S +K    D 
Sbjct  149  YRPQGLGD-LAGEAPAKLTWRM-KHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  201  GMVPPFGSKEFVSKHDISTLSTHAEIAYKLLNDYGAEVAGSAT  243
             M +P+    F  K   +T  + + I Y ++ND+G+ + ++A+
Sbjct  207  QMAAPLTETSFTLKTATTT--SSGKINYSFINDFGGIINATAS  247

116) BPSS0092 in NC_006351


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  176 bits (651),  Expect = 8e-46, Method: Compositional matrix adjust.
 Identities = 101/223 (46%), Positives = 154/223 (70%), Gaps = 8/223 (3%)

Query  25   IVITGTRVVYPESSREVNVRLNNVEQSPVLVQAWIDDGNAGASPDEIKVPFVLMPPVFRV  84
            IVI+GTR+VY  + ++VNVRL+N    P+LVQ+W+D GN  + P+ IKVPF   PPV R+
Sbjct  29   IVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVSRI  88

Query  85   EPKKGQTLRVMYTGDD-LPKDRESVYWLNVLEIPPKPTVE---AEQNLLQLAFRTRIKLF  140
            +PKKGQT+++MYTG + LP DRESV+W+NVLE+PPK+  +   A QN LQ AFRTRIKLF
Sbjct  89   DPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIKLF  148

Query  141  FRPSALEDGNAAQARDQLKWKIVRNEKGVSVLRAENRSPYYISISQATAKSGDKSVQFDP  200
            +RP +L D  A++A  +L W++ ++E+G SV+  +N +PY++S++     S +K    D 
Sbjct  149  YRPQGLGD-LAGEAPAKLTWRM-KHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  201  GMVPPFGSKEFVSKRDISTLSTHAEIAYKLLNDYGAEVAGSAT  243
             M +P+    F  K   +T  + + I Y ++ND+G+ + ++A+
Sbjct  207  QMAAPLTETSFTLKTATTT--SSGKINYSFINDFGGIINATAS  247

117) Bphyt_6928 in NC_010676


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  176 bits (652),  Expect = 8e-46, Method: Compositional matrix adjust.
 Identities = 96/224 (43%), Positives = 158/224 (71%), Gaps = 8/224 (3%)

Query  44   VTIGGTRLVYPLDQREVTAKLNNDSHVPSLVQVWMDDGNADAKPGEVKVPFLITPPIFRM  103
            + I+GTR+VY   Q++V  +L+N +  P LVQ W+D GN ++ PG +KVPF  TPP+ R+
Sbjct  29   IVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVSRI  88

Query  104  NAMKAQTLRVMYTG-EPLPQDRESIYWLNVLDIPPKANHEPQA---NTLSLAYRTRIKVF  159
            ++ K+QT+++MYTG + LP DRES++W+NVL++PPKAN + ++   NTL  A+RTRIK+F
Sbjct  89   DPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIKLF  148

Query  160  VRPASLPGKPQDAPAQLTWKLAASPNGAGQAVSVSNPTPYYVSFSEVDVESAGHSFTNKR  219
             RP +L + + +APA+LTW++    + +   V+V+NPTPY+VSF+ +++ES+G  +    
Sbjct  149  YRPQGLGDLAGEAPAKLTWRM--KHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVD-  205

Query  220  GGMVAPRASVVLPIDEMSAVAAGARVRYIAISDYGGPINGDAPL  263
            G M AP +   + +   ++ ++G ++ Y  I+D+GG IN+ A+L
Sbjct  206  GQMAAPLTETSFTLKTATTTSSG-KINYSFINDFGGIINATASL  248

118) YpAngola_A2659 in NC_010159


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  176 bits (651),  Expect = 8e-46, Method: Compositional matrix adjust.
 Identities = 95/237 (41%), Positives = 171/237 (73%), Gaps = 13/237 (5%)

Query  13   SVVATVARAEVMISGTRVIYEEKQREGVVKVSNTGDMPVLLQAWIDKGDANARPEAIKVP  72
            ++++ VA+A+++ISGTR++Y   Q++  V++ N G  P+L+Q+W+D G+ N+ P AIKVP
Sbjct  19   TLLSNVAWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVP  78

Query  73   FSVTPPVVRLDPKRDQTIR-LFRTDGGLAADRETLFWFNLLEVPPKPIQS-AAGGENKMQ  130
            F+ TPPV R+DPK++QTI+ ++     L++DRE++FWFN+LEVPPK+ ++  ++++N +Q
Sbjct  79   FNATPPVSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQ  138

Query  131  LAFRTRIKMFYRPEGLTVLPAQAAKSLAFSMKGNQ----IVIKNASPYYITLRKLELRTS  186
             AFRTRIK+FYRP+GL  L+++A+  L+  MK +Q    + ++N++PY++++  +EL ++
Sbjct  139  SAFRTRIKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELEST  198

Query  187  EKGPVLANFTKINNKMVAPFSELSLPTSAKASINNSAQVFYSVINDQGGETQGTQKL  243
             K     ++  ++ +M AP++E S+   + A+  +S+++ YS IND GG  ++T  L
Sbjct  199  GK-----KYI-VDGQMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

119) YPZ3_1997 in NC_014029


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  176 bits (651),  Expect = 8e-46, Method: Compositional matrix adjust.
 Identities = 95/237 (41%), Positives = 171/237 (73%), Gaps = 13/237 (5%)

Query  13   SVVATVARAEVMISGTRVIYEEKQREGVVKVSNTGDMPVLLQAWIDKGDANARPEAIKVP  72
            ++++ VA+A+++ISGTR++Y   Q++  V++ N G  P+L+Q+W+D G+ N+ P AIKVP
Sbjct  19   TLLSNVAWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVP  78

Query  73   FSVTPPVVRLDPKRDQTIR-LFRTDGGLAADRETLFWFNLLEVPPKPIQS-AAGGENKMQ  130
            F+ TPPV R+DPK++QTI+ ++     L++DRE++FWFN+LEVPPK+ ++  ++++N +Q
Sbjct  79   FNATPPVSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQ  138

Query  131  LAFRTRIKMFYRPEGLTVLPAQAAKSLAFSMKGNQ----IVIKNASPYYITLRKLELRTS  186
             AFRTRIK+FYRP+GL  L+++A+  L+  MK +Q    + ++N++PY++++  +EL ++
Sbjct  139  SAFRTRIKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELEST  198

Query  187  EKGPVLANFTKINNKMVAPFSELSLPTSAKASINNSAQVFYSVINDQGGETQGTQKL  243
             K     ++  ++ +M AP++E S+   + A+  +S+++ YS IND GG  ++T  L
Sbjct  199  GK-----KYI-VDGQMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

120) BRPE64_BCDS04960 in NC_021294


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  175 bits (648),  Expect = 1e-45, Method: Compositional matrix adjust.
 Identities = 93/229 (41%), Positives = 160/229 (70%), Gaps = 4/229 (1%)

Query  20   LSAQANASVVIAGTRVVYNQSDSEVTVKLTNTGKLPGLIKVWLDKGDPDAKPDTIEVPFT  79
            LS  A A +VI+GTR+VY  ++ +V V+L N G  P L++ WLD G+ ++ P++I VPF 
Sbjct  21   LSNVAWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFN  80

Query  80   ITPPLMRIDPTKSQTLRIMFAG-DPLPADKESIFYLNVLEVPPKSTGDGASSNQ--LQLA  136
             TPP+ RIDP K+QT++IM++G + LP+D+ES+F +NVLEVPPK+  +  S+ Q  LQ A
Sbjct  81   ATPPVSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSA  140

Query  137  FRTRIKFFYRPTGLKEQSVDAPGHIVWHLKKQGATNMIEASNSTEFHVSFDNVQYTDGTR  196
            FRTRIK+FYRP GL + + +AP+ + W++K + + +++  +N+T + VSF++++  ++T 
Sbjct  141  FRTRIKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIE-LESTG  199

Query  197  NAAFMEGGMVGPGETKDFPLKGDLPGAGAKVKWTVINDYGGPQHGESTM  245
            +  +++G M +P     F LK     +++K++ + IND+GG  ++ +++
Sbjct  200  KKYIVDGQMAAPLTETSFTLKTATTTSSGKINYSFINDFGGIINATASL  248

121) YpsIP31758_1676 in NC_009708


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  175 bits (649),  Expect = 1e-45, Method: Compositional matrix adjust.
 Identities = 95/237 (41%), Positives = 170/237 (72%), Gaps = 13/237 (5%)

Query  13   SVVATVARAEVMISGTRVIYEEKQREGVVKVSNTGDMPVLLQAWIDKGDANARPEAIKVP  72
            ++++ VA+A+++ISGTR++Y   Q++  V++ N G  P+L+Q+W+D G+ N+ P AIKVP
Sbjct  19   TLLSNVAWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVP  78

Query  73   FSVTPPVVRLDPKRDQTIR-LFRTDGGLAADRETLFWFNLLEVPPKPIQR-AAGGENKMQ  130
            F+ TPPV R+DPK++QTI+ ++     L++DRE++FWFN+LEVPPK+ +   ++++N +Q
Sbjct  79   FNATPPVSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQ  138

Query  131  LAFRTRIKMFYRPEGLTVLPAQAAKSLAFSMKGNQ----IVIKNASPYYITLRKLELRTS  186
             AFRTRIK+FYRP+GL  L+++A+  L+  MK +Q    + ++N++PY++++  +EL ++
Sbjct  139  SAFRTRIKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELEST  198

Query  187  EKGPVLANFTKINNKMVAPFSELSLPTSAKASINNSAQVFYSVINDQGGETQGTQKL  243
             K     ++  ++ +M AP++E S+   + A+  +S+++ YS IND GG  ++T  L
Sbjct  199  GK-----KYI-VDGQMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

122) A1122_11255 in NC_017168


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  175 bits (646),  Expect = 2e-45, Method: Compositional matrix adjust.
 Identities = 94/223 (43%), Positives = 158/223 (71%), Gaps = 7/223 (3%)

Query  19   AFAAMTISGTRVIFPAAEKEVSIRTNNKGVQPALVQVWVDDGKTNANINSMKLPFMVTPP  78
            A A + ISGTR+++ +A+K+V++R +NKG +P LVQ W+D G+ N++  ++K+PF  TPP
Sbjct  25   AWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPP  84

Query  79   VFRVEPGKGQTVRMIYNG-MALPQNKESVFWFNMLEIPA---VKKEGNTQNKLELAFRTR  134
            V R++P KGQT++++Y G  +LP ++ESVFWFN+LE+P+    + ++ +QN L+ AFRTR
Sbjct  85   VSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTR  144

Query  135  IKVFYRPTSLESNSAAQSAQLKWTLVDDNQKGRGVKVVNPTPYYISFDSGSITVGAKSVE  194
            IK+FYRP +L   ++  +A+L W + +++ K+  V V NPTPY++SF+S  +   +K   
Sbjct  145  IKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKS-VVTVNNPTPYFVSFNSIELESTGKKYI  203

Query  195  IITDMVPPFSEKMFFPKLKLLGSTSISKMNYKILNDYGAAIDE  237
            +  +M +P++E  F   LK   +TS +K+NY ++ND+G+ I+ 
Sbjct  204  VDGQMAAPLTETSF--TLKTATTTSSGKINYSFINDFGGIINA  244

123) YpAngola_A2694 in NC_010159


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  175 bits (646),  Expect = 2e-45, Method: Compositional matrix adjust.
 Identities = 94/223 (43%), Positives = 158/223 (71%), Gaps = 7/223 (3%)

Query  19   AFAAMTISGTRVIFPAAEKEVSIRTNNKGVQPALVQVWVDDGKTNANINSMKLPFMVTPP  78
            A A + ISGTR+++ +A+K+V++R +NKG +P LVQ W+D G+ N++  ++K+PF  TPP
Sbjct  25   AWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPP  84

Query  79   VFRVEPGKGQTVRMIYNG-MALPQNKESVFWFNMLEIPA---VKKEGNTQNKLELAFRTR  134
            V R++P KGQT++++Y G  +LP ++ESVFWFN+LE+P+    + ++ +QN L+ AFRTR
Sbjct  85   VSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTR  144

Query  135  IKVFYRPTSLESNSAAQSAQLKWTLVDDNQKGRGVKVVNPTPYYISFDSGSITVGAKSVE  194
            IK+FYRP +L   ++  +A+L W + +++ K+  V V NPTPY++SF+S  +   +K   
Sbjct  145  IKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKS-VVTVNNPTPYFVSFNSIELESTGKKYI  203

Query  195  IITDMVPPFSEKMFFPKLKLLGSTSISKMNYKILNDYGAAIDE  237
            +  +M +P++E  F   LK   +TS +K+NY ++ND+G+ I+ 
Sbjct  204  VDGQMAAPLTETSF--TLKTATTTSSGKINYSFINDFGGIINA  244

124) YPA_2135 in NC_008150


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  175 bits (646),  Expect = 2e-45, Method: Compositional matrix adjust.
 Identities = 94/223 (43%), Positives = 158/223 (71%), Gaps = 7/223 (3%)

Query  19   AFAAMTISGTRVIFPAAEKEVSIRTNNKGVQPALVQVWVDDGKTNANINSMKLPFMVTPP  78
            A A + ISGTR+++ +A+K+V++R +NKG +P LVQ W+D G+ N++  ++K+PF  TPP
Sbjct  25   AWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPP  84

Query  79   VFRVEPGKGQTVRMIYNG-MALPQNKESVFWFNMLEIPA---VKKEGNTQNKLELAFRTR  134
            V R++P KGQT++++Y G  +LP ++ESVFWFN+LE+P+    + ++ +QN L+ AFRTR
Sbjct  85   VSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTR  144

Query  135  IKVFYRPTSLESNSAAQSAQLKWTLVDDNQKGRGVKVVNPTPYYISFDSGSITVGAKSVE  194
            IK+FYRP +L   ++  +A+L W + +++ K+  V V NPTPY++SF+S  +   +K   
Sbjct  145  IKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKS-VVTVNNPTPYFVSFNSIELESTGKKYI  203

Query  195  IITDMVPPFSEKMFFPKLKLLGSTSISKMNYKILNDYGAAIDE  237
            +  +M +P++E  F   LK   +TS +K+NY ++ND+G+ I+ 
Sbjct  204  VDGQMAAPLTETSF--TLKTATTTSSGKINYSFINDFGGIINA  244

125) YPC_1454 in NC_017265


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  175 bits (646),  Expect = 2e-45, Method: Compositional matrix adjust.
 Identities = 94/223 (43%), Positives = 158/223 (71%), Gaps = 7/223 (3%)

Query  19   AFAAMTISGTRVIFPAAEKEVSIRTNNKGVQPALVQVWVDDGKTNANINSMKLPFMVTPP  78
            A A + ISGTR+++ +A+K+V++R +NKG +P LVQ W+D G+ N++  ++K+PF  TPP
Sbjct  25   AWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPP  84

Query  79   VFRVEPGKGQTVRMIYNG-MALPQNKESVFWFNMLEIPA---VKKEGNTQNKLELAFRTR  134
            V R++P KGQT++++Y G  +LP ++ESVFWFN+LE+P+    + ++ +QN L+ AFRTR
Sbjct  85   VSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTR  144

Query  135  IKVFYRPTSLESNSAAQSAQLKWTLVDDNQKGRGVKVVNPTPYYISFDSGSITVGAKSVE  194
            IK+FYRP +L   ++  +A+L W + +++ K+  V V NPTPY++SF+S  +   +K   
Sbjct  145  IKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKS-VVTVNNPTPYFVSFNSIELESTGKKYI  203

Query  195  IITDMVPPFSEKMFFPKLKLLGSTSISKMNYKILNDYGAAIDE  237
            +  +M +P++E  F   LK   +TS +K+NY ++ND+G+ I+ 
Sbjct  204  VDGQMAAPLTETSF--TLKTATTTSSGKINYSFINDFGGIINA  244

126) ecpD2 in NC_005810


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  175 bits (647),  Expect = 2e-45, Method: Compositional matrix adjust.
 Identities = 94/223 (43%), Positives = 158/223 (71%), Gaps = 7/223 (3%)

Query  25   AFAAMTISGTRVIFPAAEKEVSIRTNNKGVQPALVQVWVDDGKTNANINSMKLPFMVTPP  84
            A A + ISGTR+++ +A+K+V++R +NKG +P LVQ W+D G+ N++  ++K+PF  TPP
Sbjct  25   AWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPP  84

Query  85   VFRVEPGKGQTVRMIYNG-MALPQNKESVFWFNMLEIPA---VKKEGNTQNKLELAFRTR  140
            V R++P KGQT++++Y G  +LP ++ESVFWFN+LE+P+    + ++ +QN L+ AFRTR
Sbjct  85   VSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTR  144

Query  141  IKVFYRPTSLESNSAAQSAQLKWTLVDDNQKGRGVKVVNPTPYYISFDSGSITVGAKSVE  200
            IK+FYRP +L   ++  +A+L W + +++ K+  V V NPTPY++SF+S  +   +K   
Sbjct  145  IKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKS-VVTVNNPTPYFVSFNSIELESTGKKYI  203

Query  201  IITDMVPPFSEKMFFPKLKLLGSTSISKMNYKILNDYGAAIDE  243
            +  +M +P++E  F   LK   +TS +K+NY ++ND+G+ I+ 
Sbjct  204  VDGQMAAPLTETSF--TLKTATTTSSGKINYSFINDFGGIINA  244

127) YPO2944 in NC_003143


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  175 bits (647),  Expect = 2e-45, Method: Compositional matrix adjust.
 Identities = 94/223 (43%), Positives = 158/223 (71%), Gaps = 7/223 (3%)

Query  25   AFAAMTISGTRVIFPAAEKEVSIRTNNKGVQPALVQVWVDDGKTNANINSMKLPFMVTPP  84
            A A + ISGTR+++ +A+K+V++R +NKG +P LVQ W+D G+ N++  ++K+PF  TPP
Sbjct  25   AWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPP  84

Query  85   VFRVEPGKGQTVRMIYNG-MALPQNKESVFWFNMLEIPA---VKKEGNTQNKLELAFRTR  140
            V R++P KGQT++++Y G  +LP ++ESVFWFN+LE+P+    + ++ +QN L+ AFRTR
Sbjct  85   VSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTR  144

Query  141  IKVFYRPTSLESNSAAQSAQLKWTLVDDNQKGRGVKVVNPTPYYISFDSGSITVGAKSVE  200
            IK+FYRP +L   ++  +A+L W + +++ K+  V V NPTPY++SF+S  +   +K   
Sbjct  145  IKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKS-VVTVNNPTPYFVSFNSIELESTGKKYI  203

Query  201  IITDMVPPFSEKMFFPKLKLLGSTSISKMNYKILNDYGAAIDE  243
            +  +M +P++E  F   LK   +TS +K+NY ++ND+G+ I+ 
Sbjct  204  VDGQMAAPLTETSF--TLKTATTTSSGKINYSFINDFGGIINA  244

128) YPD4_2578 in NC_017154


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  175 bits (646),  Expect = 2e-45, Method: Compositional matrix adjust.
 Identities = 94/223 (43%), Positives = 158/223 (71%), Gaps = 7/223 (3%)

Query  19   AFAAMTISGTRVIFPAAEKEVSIRTNNKGVQPALVQVWVDDGKTNANINSMKLPFMVTPP  78
            A A + ISGTR+++ +A+K+V++R +NKG +P LVQ W+D G+ N++  ++K+PF  TPP
Sbjct  25   AWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPP  84

Query  79   VFRVEPGKGQTVRMIYNG-MALPQNKESVFWFNMLEIPA---VKKEGNTQNKLELAFRTR  134
            V R++P KGQT++++Y G  +LP ++ESVFWFN+LE+P+    + ++ +QN L+ AFRTR
Sbjct  85   VSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTR  144

Query  135  IKVFYRPTSLESNSAAQSAQLKWTLVDDNQKGRGVKVVNPTPYYISFDSGSITVGAKSVE  194
            IK+FYRP +L   ++  +A+L W + +++ K+  V V NPTPY++SF+S  +   +K   
Sbjct  145  IKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKS-VVTVNNPTPYFVSFNSIELESTGKKYI  203

Query  195  IITDMVPPFSEKMFFPKLKLLGSTSISKMNYKILNDYGAAIDE  237
            +  +M +P++E  F   LK   +TS +K+NY ++ND+G+ I+ 
Sbjct  204  VDGQMAAPLTETSF--TLKTATTTSSGKINYSFINDFGGIINA  244

129) YPD8_2573 in NC_017160


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  175 bits (646),  Expect = 2e-45, Method: Compositional matrix adjust.
 Identities = 94/223 (43%), Positives = 158/223 (71%), Gaps = 7/223 (3%)

Query  19   AFAAMTISGTRVIFPAAEKEVSIRTNNKGVQPALVQVWVDDGKTNANINSMKLPFMVTPP  78
            A A + ISGTR+++ +A+K+V++R +NKG +P LVQ W+D G+ N++  ++K+PF  TPP
Sbjct  25   AWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPP  84

Query  79   VFRVEPGKGQTVRMIYNG-MALPQNKESVFWFNMLEIPA---VKKEGNTQNKLELAFRTR  134
            V R++P KGQT++++Y G  +LP ++ESVFWFN+LE+P+    + ++ +QN L+ AFRTR
Sbjct  85   VSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTR  144

Query  135  IKVFYRPTSLESNSAAQSAQLKWTLVDDNQKGRGVKVVNPTPYYISFDSGSITVGAKSVE  194
            IK+FYRP +L   ++  +A+L W + +++ K+  V V NPTPY++SF+S  +   +K   
Sbjct  145  IKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKS-VVTVNNPTPYFVSFNSIELESTGKKYI  203

Query  195  IITDMVPPFSEKMFFPKLKLLGSTSISKMNYKILNDYGAAIDE  237
            +  +M +P++E  F   LK   +TS +K+NY ++ND+G+ I+ 
Sbjct  204  VDGQMAAPLTETSF--TLKTATTTSSGKINYSFINDFGGIINA  244

130) ecpD in NC_004088


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  175 bits (647),  Expect = 2e-45, Method: Compositional matrix adjust.
 Identities = 94/223 (43%), Positives = 158/223 (71%), Gaps = 7/223 (3%)

Query  25   AFAAMTISGTRVIFPAAEKEVSIRTNNKGVQPALVQVWVDDGKTNANINSMKLPFMVTPP  84
            A A + ISGTR+++ +A+K+V++R +NKG +P LVQ W+D G+ N++  ++K+PF  TPP
Sbjct  25   AWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPP  84

Query  85   VFRVEPGKGQTVRMIYNG-MALPQNKESVFWFNMLEIPA---VKKEGNTQNKLELAFRTR  140
            V R++P KGQT++++Y G  +LP ++ESVFWFN+LE+P+    + ++ +QN L+ AFRTR
Sbjct  85   VSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTR  144

Query  141  IKVFYRPTSLESNSAAQSAQLKWTLVDDNQKGRGVKVVNPTPYYISFDSGSITVGAKSVE  200
            IK+FYRP +L   ++  +A+L W + +++ K+  V V NPTPY++SF+S  +   +K   
Sbjct  145  IKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKS-VVTVNNPTPYFVSFNSIELESTGKKYI  203

Query  201  IITDMVPPFSEKMFFPKLKLLGSTSISKMNYKILNDYGAAIDE  243
            +  +M +P++E  F   LK   +TS +K+NY ++ND+G+ I+ 
Sbjct  204  VDGQMAAPLTETSF--TLKTATTTSSGKINYSFINDFGGIINA  244

131) YPN_1436 in NC_008149


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  175 bits (646),  Expect = 2e-45, Method: Compositional matrix adjust.
 Identities = 94/223 (43%), Positives = 158/223 (71%), Gaps = 7/223 (3%)

Query  19   AFAAMTISGTRVIFPAAEKEVSIRTNNKGVQPALVQVWVDDGKTNANINSMKLPFMVTPP  78
            A A + ISGTR+++ +A+K+V++R +NKG +P LVQ W+D G+ N++  ++K+PF  TPP
Sbjct  25   AWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPP  84

Query  79   VFRVEPGKGQTVRMIYNG-MALPQNKESVFWFNMLEIPA---VKKEGNTQNKLELAFRTR  134
            V R++P KGQT++++Y G  +LP ++ESVFWFN+LE+P+    + ++ +QN L+ AFRTR
Sbjct  85   VSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTR  144

Query  135  IKVFYRPTSLESNSAAQSAQLKWTLVDDNQKGRGVKVVNPTPYYISFDSGSITVGAKSVE  194
            IK+FYRP +L   ++  +A+L W + +++ K+  V V NPTPY++SF+S  +   +K   
Sbjct  145  IKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKS-VVTVNNPTPYFVSFNSIELESTGKKYI  203

Query  195  IITDMVPPFSEKMFFPKLKLLGSTSISKMNYKILNDYGAAIDE  237
            +  +M +P++E  F   LK   +TS +K+NY ++ND+G+ I+ 
Sbjct  204  VDGQMAAPLTETSF--TLKTATTTSSGKINYSFINDFGGIINA  244

132) YPDSF_2052 in NC_009381


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  175 bits (646),  Expect = 2e-45, Method: Compositional matrix adjust.
 Identities = 94/223 (43%), Positives = 158/223 (71%), Gaps = 7/223 (3%)

Query  19   AFAAMTISGTRVIFPAAEKEVSIRTNNKGVQPALVQVWVDDGKTNANINSMKLPFMVTPP  78
            A A + ISGTR+++ +A+K+V++R +NKG +P LVQ W+D G+ N++  ++K+PF  TPP
Sbjct  25   AWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPP  84

Query  79   VFRVEPGKGQTVRMIYNG-MALPQNKESVFWFNMLEIPA---VKKEGNTQNKLELAFRTR  134
            V R++P KGQT++++Y G  +LP ++ESVFWFN+LE+P+    + ++ +QN L+ AFRTR
Sbjct  85   VSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTR  144

Query  135  IKVFYRPTSLESNSAAQSAQLKWTLVDDNQKGRGVKVVNPTPYYISFDSGSITVGAKSVE  194
            IK+FYRP +L   ++  +A+L W + +++ K+  V V NPTPY++SF+S  +   +K   
Sbjct  145  IKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKS-VVTVNNPTPYFVSFNSIELESTGKKYI  203

Query  195  IITDMVPPFSEKMFFPKLKLLGSTSISKMNYKILNDYGAAIDE  237
            +  +M +P++E  F   LK   +TS +K+NY ++ND+G+ I+ 
Sbjct  204  VDGQMAAPLTETSF--TLKTATTTSSGKINYSFINDFGGIINA  244

133) YPZ3_2592 in NC_014029


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  175 bits (646),  Expect = 2e-45, Method: Compositional matrix adjust.
 Identities = 94/223 (43%), Positives = 158/223 (71%), Gaps = 7/223 (3%)

Query  19   AFAAMTISGTRVIFPAAEKEVSIRTNNKGVQPALVQVWVDDGKTNANINSMKLPFMVTPP  78
            A A + ISGTR+++ +A+K+V++R +NKG +P LVQ W+D G+ N++  ++K+PF  TPP
Sbjct  25   AWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPP  84

Query  79   VFRVEPGKGQTVRMIYNG-MALPQNKESVFWFNMLEIPA---VKKEGNTQNKLELAFRTR  134
            V R++P KGQT++++Y G  +LP ++ESVFWFN+LE+P+    + ++ +QN L+ AFRTR
Sbjct  85   VSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTR  144

Query  135  IKVFYRPTSLESNSAAQSAQLKWTLVDDNQKGRGVKVVNPTPYYISFDSGSITVGAKSVE  194
            IK+FYRP +L   ++  +A+L W + +++ K+  V V NPTPY++SF+S  +   +K   
Sbjct  145  IKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKS-VVTVNNPTPYFVSFNSIELESTGKKYI  203

Query  195  IITDMVPPFSEKMFFPKLKLLGSTSISKMNYKILNDYGAAIDE  237
            +  +M +P++E  F   LK   +TS +K+NY ++ND+G+ I+ 
Sbjct  204  VDGQMAAPLTETSF--TLKTATTTSSGKINYSFINDFGGIINA  244

134) YpsIP31758_1364 in NC_009708


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  175 bits (646),  Expect = 2e-45, Method: Compositional matrix adjust.
 Identities = 94/223 (43%), Positives = 158/223 (71%), Gaps = 7/223 (3%)

Query  19   AFAAMTISGTRVIFPAAEKEVSIRTNNKGVQPALVQVWVDDGKTNANINSMKLPFMVTPP  78
            A A + ISGTR+++ +A+K+V++R +NKG +P LVQ W+D G+ N++  ++K+PF  TPP
Sbjct  25   AWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPP  84

Query  79   VFRVEPGKGQTVRMIYNG-MALPQNKESVFWFNMLEIPA---VKKEGNTQNKLELAFRTR  134
            V R++P KGQT++++Y G  +LP ++ESVFWFN+LE+P+    + ++ +QN L+ AFRTR
Sbjct  85   VSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTR  144

Query  135  IKVFYRPTSLESNSAAQSAQLKWTLVDDNQKGRGVKVVNPTPYYISFDSGSITVGAKSVE  194
            IK+FYRP +L   ++  +A+L W + +++ K+  V V NPTPY++SF+S  +   +K   
Sbjct  145  IKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKS-VVTVNNPTPYFVSFNSIELESTGKKYI  203

Query  195  IITDMVPPFSEKMFFPKLKLLGSTSISKMNYKILNDYGAAIDE  237
            +  +M +P++E  F   LK   +TS +K+NY ++ND+G+ I+ 
Sbjct  204  VDGQMAAPLTETSF--TLKTATTTSSGKINYSFINDFGGIINA  244

135) YPTB2669 in NC_006155


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  175 bits (646),  Expect = 2e-45, Method: Compositional matrix adjust.
 Identities = 94/223 (43%), Positives = 158/223 (71%), Gaps = 7/223 (3%)

Query  19   AFAAMTISGTRVIFPAAEKEVSIRTNNKGVQPALVQVWVDDGKTNANINSMKLPFMVTPP  78
            A A + ISGTR+++ +A+K+V++R +NKG +P LVQ W+D G+ N++  ++K+PF  TPP
Sbjct  25   AWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPP  84

Query  79   VFRVEPGKGQTVRMIYNG-MALPQNKESVFWFNMLEIPA---VKKEGNTQNKLELAFRTR  134
            V R++P KGQT++++Y G  +LP ++ESVFWFN+LE+P+    + ++ +QN L+ AFRTR
Sbjct  85   VSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTR  144

Query  135  IKVFYRPTSLESNSAAQSAQLKWTLVDDNQKGRGVKVVNPTPYYISFDSGSITVGAKSVE  194
            IK+FYRP +L   ++  +A+L W + +++ K+  V V NPTPY++SF+S  +   +K   
Sbjct  145  IKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKS-VVTVNNPTPYFVSFNSIELESTGKKYI  203

Query  195  IITDMVPPFSEKMFFPKLKLLGSTSISKMNYKILNDYGAAIDE  237
            +  +M +P++E  F   LK   +TS +K+NY ++ND+G+ I+ 
Sbjct  204  VDGQMAAPLTETSF--TLKTATTTSSGKINYSFINDFGGIINA  244

136) YPK_1476 in NC_010465


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  175 bits (646),  Expect = 2e-45, Method: Compositional matrix adjust.
 Identities = 94/223 (43%), Positives = 158/223 (71%), Gaps = 7/223 (3%)

Query  19   AFAAMTISGTRVIFPAAEKEVSIRTNNKGVQPALVQVWVDDGKTNANINSMKLPFMVTPP  78
            A A + ISGTR+++ +A+K+V++R +NKG +P LVQ W+D G+ N++  ++K+PF  TPP
Sbjct  25   AWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPP  84

Query  79   VFRVEPGKGQTVRMIYNG-MALPQNKESVFWFNMLEIPA---VKKEGNTQNKLELAFRTR  134
            V R++P KGQT++++Y G  +LP ++ESVFWFN+LE+P+    + ++ +QN L+ AFRTR
Sbjct  85   VSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTR  144

Query  135  IKVFYRPTSLESNSAAQSAQLKWTLVDDNQKGRGVKVVNPTPYYISFDSGSITVGAKSVE  194
            IK+FYRP +L   ++  +A+L W + +++ K+  V V NPTPY++SF+S  +   +K   
Sbjct  145  IKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKS-VVTVNNPTPYFVSFNSIELESTGKKYI  203

Query  195  IITDMVPPFAEKMFFPKLKLLGSTSISKMNYKILNDYGAAIDE  237
            +  +M +P++E  F   LK   +TS +K+NY ++ND+G+ I+ 
Sbjct  204  VDGQMAAPLTETSF--TLKTATTTSSGKINYSFINDFGGIINA  244

137) UMN179_00810 in NC_015460


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  173 bits (642),  Expect = 4e-45, Method: Compositional matrix adjust.
 Identities = 95/223 (43%), Positives = 163/223 (74%), Gaps = 12/223 (5%)

Query  19   ANVVITGTRVIYPSNQKTVSVQLTNAGTKPSLVQAWIDNGDPKAAPETIKTPFVITPPIS  78
            A++VI+GTR++Y + QK V+V+L N G++P LVQ+W+D G+ ++ P +IK PF  TPP+S
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  79   RIDGNKGQTLRITYTGA-SLPKDRESIFYLNVLDIPPKPKDQ----SQNYLQIALRSRIK  133
            RID +KGQT++I YTG+ +LP DRES+F +NVL++PPK++ +    +QN LQ A+R+RIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  134  LFFRPVELTISPSDAYSQVKWR---GQGKQLL-VDNPTPYYITYPEVKVGTAET---VSA  186
            LF+RP  L   +++A +++ WR    QGK ++ V+NPTPY++++  + + ++     V +
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  187  NMIAPFSQATFQLNKAIPTSATTVTWTVINDYGATPSGTSTMQ  229
            +M AP+++++F L+ A  TS+  +  + IND+G+  ++T+++Q
Sbjct  207  QMAAPLTETSFTLKTATTTSSGKINYSFINDFGGIINATASLQ  249

138) H681_03335 in NC_020829


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  173 bits (640),  Expect = 6e-45, Method: Compositional matrix adjust.
 Identities = 94/226 (42%), Positives = 157/226 (70%), Gaps = 8/226 (3%)

Query  26   ANVVITGTRVVYPAAEREVTVKLTNAGTTPALVQAWVDRGDPKTRPEQSDAPFVVTPPVA  85
            A++VI+GTR+VY +A+++V V+L N G+ P LVQ+W+D G+ +T P     PF  TPPV+
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  86   RLDASKGQTLRIAFTG-ESLPGDRESVFWLNVLDVPPLPTQKDI----NYMQVAYRSRIK  140
            R+D+ KGQT++I +TG ++LP+DRESVFW+NVL+VPP + +++     N +Q A+R+RIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  141  LFYRPAGLPGNPSQAAEKLAWTLTPDAHGLALNCTNASAYHLSLGRVTLLVAGKRFTSDA  200
            LFYRP GL + +++A+ KL+W +  +     +   N+++Y +S+  + L  +GK++  D+
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  201  DGMVRPGSTMSFPLKGLATPPTGEMKVTYNWINDYGASIPGESLLR  246
            + M  P +  SF LK  +T ++G  K+ Y+ IND+G+ I + + L+
Sbjct  207  Q-MAAPLTETSFTLKTATTTSSG--KINYSFINDFGGIINATASLQ  249

139) YPD4_1517 in NC_017154


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  172 bits (638),  Expect = 8e-45, Method: Compositional matrix adjust.
 Identities = 94/232 (41%), Positives = 167/232 (72%), Gaps = 13/232 (5%)

Query  1    MARAEVMISGTRVIYEEKQREGVVKVSNTGDMPVLLQAWIDKGDANARPEAIKVPFSVTP  60
            +A+A+++ISGTR++Y   Q++  V++ N G  P+L+Q+W+D G+ N+ P AIKVPF+ TP
Sbjct  24   VAWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATP  83

Query  61   PVVRLDPKRDQTIR-LFRTDGGLAADRETLFWFNLLEVPPKPIQS-AAGGENKMQLAFRT  118
            PV R+DPK++QTI+ ++     L++DRE++FWFN+LEVPPK+ ++  ++++N +Q AFRT
Sbjct  84   PVSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRT  143

Query  119  RIKMFYRPEGLTVLPAQAAKSLAFSMKGNQ----IVIKNASPYYITLRKLELRTSEKGPV  174
            RIK+FYRP+GL  L+++A+  L+  MK +Q    + ++N++PY++++  +EL ++ K   
Sbjct  144  RIKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGK---  200

Query  175  LANFTKINNKMVAPFSELSLPTSAKASINNSAQVFYSVINDQGGETQGTQKL  226
              ++  ++ +M AP++E S+   + A+  +S+++ YS IND GG  ++T  L
Sbjct  201  --KYI-VDGQMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

140) YPD8_2034 in NC_017160


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  172 bits (638),  Expect = 8e-45, Method: Compositional matrix adjust.
 Identities = 94/232 (41%), Positives = 167/232 (72%), Gaps = 13/232 (5%)

Query  1    MARAEVMISGTRVIYEEKQREGVVKVSNTGDMPVLLQAWIDKGDANARPEAIKVPFSVTP  60
            +A+A+++ISGTR++Y   Q++  V++ N G  P+L+Q+W+D G+ N+ P AIKVPF+ TP
Sbjct  24   VAWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATP  83

Query  61   PVVRLDPKRDQTIR-LFRTDGGLAADRETLFWFNLLEVPPKPIQS-AAGGENKMQLAFRT  118
            PV R+DPK++QTI+ ++     L++DRE++FWFN+LEVPPK+ ++  ++++N +Q AFRT
Sbjct  84   PVSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRT  143

Query  119  RIKMFYRPEGLTVLPAQAAKSLAFSMKGNQ----IVIKNASPYYITLRKLELRTSEKGPV  174
            RIK+FYRP+GL  L+++A+  L+  MK +Q    + ++N++PY++++  +EL ++ K   
Sbjct  144  RIKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGK---  200

Query  175  LANFTKINNKMVAPFSELSLPTSAKASINNSAQVFYSVINDQGGETQGTQKL  226
              ++  ++ +M AP++E S+   + A+  +S+++ YS IND GG  ++T  L
Sbjct  201  --KYI-VDGQMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

141) A1122_17340 in NC_017168


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  171 bits (634),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 93/230 (41%), Positives = 165/230 (72%), Gaps = 13/230 (5%)

Query  34   RAEVMISGTRVIYEEKQREGVVKVSNTGDMPVLLQAWIDKGDANARPEAIKVPFSVTPPV  93
            +A+++ISGTR++Y   Q++  V++ N G  P+L+Q+W+D G+ N+ P AIKVPF+ TPPV
Sbjct  26   WADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPV  85

Query  94   VRLDPKRDQTIR-LFRTDGGLAADRETLFWFNLLEVPPKPIQS-AAGGENKMQLAFRTRI  151
             R+DPK++QTI+ ++     L++DRE++FWFN+LEVPPK+ ++  ++++N +Q AFRTRI
Sbjct  86   SRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRI  145

Query  152  KMFYRPEGLTVLPAQAAKSLAFSMKGNQ----IVIKNASPYYITLRKLELRTSEKGPVLA  207
            K+FYRP+GL  L+++A+  L+  MK +Q    + ++N++PY++++  +EL ++ K     
Sbjct  146  KLFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGK-----  200

Query  208  NFTKINNKMVAPFSELSLPTSAKASINNSAQVFYSVINDQGGETQGTQKL  257
            ++  ++ +M AP++E S+   + A+  +S+++ YS IND GG  ++T  L
Sbjct  201  KYI-VDGQMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

142) YPA_1813 in NC_008150


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  171 bits (634),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 93/230 (41%), Positives = 165/230 (72%), Gaps = 13/230 (5%)

Query  34   RAEVMISGTRVIYEEKQREGVVKVSNTGDMPVLLQAWIDKGDANARPEAIKVPFSVTPPV  93
            +A+++ISGTR++Y   Q++  V++ N G  P+L+Q+W+D G+ N+ P AIKVPF+ TPPV
Sbjct  26   WADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPV  85

Query  94   VRLDPKRDQTIR-LFRTDGGLAADRETLFWFNLLEVPPKPIQS-AAGGENKMQLAFRTRI  151
             R+DPK++QTI+ ++     L++DRE++FWFN+LEVPPK+ ++  ++++N +Q AFRTRI
Sbjct  86   SRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRI  145

Query  152  KMFYRPEGLTVLPAQAAKSLAFSMKGNQ----IVIKNASPYYITLRKLELRTSEKGPVLA  207
            K+FYRP+GL  L+++A+  L+  MK +Q    + ++N++PY++++  +EL ++ K     
Sbjct  146  KLFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGK-----  200

Query  208  NFTKINNKMVAPFSELSLPTSAKASINNSAQVFYSVINDQGGETQGTQKL  257
            ++  ++ +M AP++E S+   + A+  +S+++ YS IND GG  ++T  L
Sbjct  201  KYI-VDGQMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

143) YPC_2109 in NC_017265


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  171 bits (634),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 93/230 (41%), Positives = 165/230 (72%), Gaps = 13/230 (5%)

Query  34   RAEVMISGTRVIYEEKQREGVVKVSNTGDMPVLLQAWIDKGDANARPEAIKVPFSVTPPV  93
            +A+++ISGTR++Y   Q++  V++ N G  P+L+Q+W+D G+ N+ P AIKVPF+ TPPV
Sbjct  26   WADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPV  85

Query  94   VRLDPKRDQTIR-LFRTDGGLAADRETLFWFNLLEVPPKPIQS-AAGGENKMQLAFRTRI  151
             R+DPK++QTI+ ++     L++DRE++FWFN+LEVPPK+ ++  ++++N +Q AFRTRI
Sbjct  86   SRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRI  145

Query  152  KMFYRPEGLTVLPAQAAKSLAFSMKGNQ----IVIKNASPYYITLRKLELRTSEKGPVLA  207
            K+FYRP+GL  L+++A+  L+  MK +Q    + ++N++PY++++  +EL ++ K     
Sbjct  146  KLFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGK-----  200

Query  208  NFTKINNKMVAPFSELSLPTSAKASINNSAQVFYSVINDQGGETQGTQKL  257
            ++  ++ +M AP++E S+   + A+  +S+++ YS IND GG  ++T  L
Sbjct  201  KYI-VDGQMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

144) ecpD1 in NC_005810


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  171 bits (634),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 93/230 (41%), Positives = 165/230 (72%), Gaps = 13/230 (5%)

Query  34   RAEVMISGTRVIYEEKQREGVVKVSNTGDMPVLLQAWIDKGDANARPEAIKVPFSVTPPV  93
            +A+++ISGTR++Y   Q++  V++ N G  P+L+Q+W+D G+ N+ P AIKVPF+ TPPV
Sbjct  26   WADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPV  85

Query  94   VRLDPKRDQTIR-LFRTDGGLAADRETLFWFNLLEVPPKPIQS-AAGGENKMQLAFRTRI  151
             R+DPK++QTI+ ++     L++DRE++FWFN+LEVPPK+ ++  ++++N +Q AFRTRI
Sbjct  86   SRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRI  145

Query  152  KMFYRPEGLTVLPAQAAKSLAFSMKGNQ----IVIKNASPYYITLRKLELRTSEKGPVLA  207
            K+FYRP+GL  L+++A+  L+  MK +Q    + ++N++PY++++  +EL ++ K     
Sbjct  146  KLFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGK-----  200

Query  208  NFTKINNKMVAPFSELSLPTSAKASINNSAQVFYSVINDQGGETQGTQKL  257
            ++  ++ +M AP++E S+   + A+  +S+++ YS IND GG  ++T  L
Sbjct  201  KYI-VDGQMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

145) ecpD in NC_003143


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  171 bits (634),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 93/230 (41%), Positives = 165/230 (72%), Gaps = 13/230 (5%)

Query  34   RAEVMISGTRVIYEEKQREGVVKVSNTGDMPVLLQAWIDKGDANARPEAIKVPFSVTPPV  93
            +A+++ISGTR++Y   Q++  V++ N G  P+L+Q+W+D G+ N+ P AIKVPF+ TPPV
Sbjct  26   WADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPV  85

Query  94   VRLDPKRDQTIR-LFRTDGGLAADRETLFWFNLLEVPPKPIQS-AAGGENKMQLAFRTRI  151
             R+DPK++QTI+ ++     L++DRE++FWFN+LEVPPK+ ++  ++++N +Q AFRTRI
Sbjct  86   SRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRI  145

Query  152  KMFYRPEGLTVLPAQAAKSLAFSMKGNQ----IVIKNASPYYITLRKLELRTSEKGPVLA  207
            K+FYRP+GL  L+++A+  L+  MK +Q    + ++N++PY++++  +EL ++ K     
Sbjct  146  KLFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGK-----  200

Query  208  NFTKINNKMVAPFSELSLPTSAKASINNSAQVFYSVINDQGGETQGTQKL  257
            ++  ++ +M AP++E S+   + A+  +S+++ YS IND GG  ++T  L
Sbjct  201  KYI-VDGQMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

146) ecpD in NC_004088


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  171 bits (634),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 93/230 (41%), Positives = 165/230 (72%), Gaps = 13/230 (5%)

Query  34   RAEVMISGTRVIYEEKQREGVVKVSNTGDMPVLLQAWIDKGDANARPEAIKVPFSVTPPV  93
            +A+++ISGTR++Y   Q++  V++ N G  P+L+Q+W+D G+ N+ P AIKVPF+ TPPV
Sbjct  26   WADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPV  85

Query  94   VRLDPKRDQTIR-LFRTDGGLAADRETLFWFNLLEVPPKPIQS-AAGGENKMQLAFRTRI  151
             R+DPK++QTI+ ++     L++DRE++FWFN+LEVPPK+ ++  ++++N +Q AFRTRI
Sbjct  86   SRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRI  145

Query  152  KMFYRPEGLTVLPAQAAKSLAFSMKGNQ----IVIKNASPYYITLRKLELRTSEKGPVLA  207
            K+FYRP+GL  L+++A+  L+  MK +Q    + ++N++PY++++  +EL ++ K     
Sbjct  146  KLFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGK-----  200

Query  208  NFTKINNKMVAPFSELSLPTSAKASINNSAQVFYSVINDQGGETQGTQKL  257
            ++  ++ +M AP++E S+   + A+  +S+++ YS IND GG  ++T  L
Sbjct  201  KYI-VDGQMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

147) YPN_1922 in NC_008149


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  171 bits (634),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 93/230 (41%), Positives = 165/230 (72%), Gaps = 13/230 (5%)

Query  34   RAEVMISGTRVIYEEKQREGVVKVSNTGDMPVLLQAWIDKGDANARPEAIKVPFSVTPPV  93
            +A+++ISGTR++Y   Q++  V++ N G  P+L+Q+W+D G+ N+ P AIKVPF+ TPPV
Sbjct  26   WADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPV  85

Query  94   VRLDPKRDQTIR-LFRTDGGLAADRETLFWFNLLEVPPKPIQS-AAGGENKMQLAFRTRI  151
             R+DPK++QTI+ ++     L++DRE++FWFN+LEVPPK+ ++  ++++N +Q AFRTRI
Sbjct  86   SRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRI  145

Query  152  KMFYRPEGLTVLPAQAAKSLAFSMKGNQ----IVIKNASPYYITLRKLELRTSEKGPVLA  207
            K+FYRP+GL  L+++A+  L+  MK +Q    + ++N++PY++++  +EL ++ K     
Sbjct  146  KLFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGK-----  200

Query  208  NFTKINNKMVAPFSELSLPTSAKASINNSAQVFYSVINDQGGETQGTQKL  257
            ++  ++ +M AP++E S+   + A+  +S+++ YS IND GG  ++T  L
Sbjct  201  KYI-VDGQMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

148) YPDSF_1740 in NC_009381


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  171 bits (634),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 93/230 (41%), Positives = 165/230 (72%), Gaps = 13/230 (5%)

Query  34   RAEVMISGTRVIYEEKQREGVVKVSNTGDMPVLLQAWIDKGDANARPEAIKVPFSVTPPV  93
            +A+++ISGTR++Y   Q++  V++ N G  P+L+Q+W+D G+ N+ P AIKVPF+ TPPV
Sbjct  26   WADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPV  85

Query  94   VRLDPKRDQTIR-LFRTDGGLAADRETLFWFNLLEVPPKPIQS-AAGGENKMQLAFRTRI  151
             R+DPK++QTI+ ++     L++DRE++FWFN+LEVPPK+ ++  ++++N +Q AFRTRI
Sbjct  86   SRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRI  145

Query  152  KMFYRPEGLTVLPAQAAKSLAFSMKGNQ----IVIKNASPYYITLRKLELRTSEKGPVLA  207
            K+FYRP+GL  L+++A+  L+  MK +Q    + ++N++PY++++  +EL ++ K     
Sbjct  146  KLFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGK-----  200

Query  208  NFTKINNKMVAPFSELSLPTSAKASINNSAQVFYSVINDQGGETQGTQKL  257
            ++  ++ +M AP++E S+   + A+  +S+++ YS IND GG  ++T  L
Sbjct  201  KYI-VDGQMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

149) ecpD in NC_006155


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  171 bits (634),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 93/230 (41%), Positives = 165/230 (72%), Gaps = 13/230 (5%)

Query  34   RAEVMISGTRVIYEEKQREGVVKVSNTGDMPVLLQAWIDKGDANARPEAIKVPFSVTPPV  93
            +A+++ISGTR++Y   Q++  V++ N G  P+L+Q+W+D G+ N+ P AIKVPF+ TPPV
Sbjct  26   WADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPV  85

Query  94   VRLDPKRDQTIR-LFRTDGGLAADRETLFWFNLLEVPPKPIQS-AAGGENKMQLAFRTRI  151
             R+DPK++QTI+ ++     L++DRE++FWFN+LEVPPK+ ++  ++++N +Q AFRTRI
Sbjct  86   SRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRI  145

Query  152  KMFYRPEGLTVLPAQAAKSLAFSMKGNQ----IVIKNASPYYITLRKLELRTSEKGPVLA  207
            K+FYRP+GL  L+++A+  L+  MK +Q    + ++N++PY++++  +EL ++ K     
Sbjct  146  KLFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGK-----  200

Query  208  NFTKINNKMVAPFSELSLPTSAKASINNSAQVFYSVINDQGGETQGTQKL  257
            ++  ++ +M AP++E S+   + A+  +S+++ YS IND GG  ++T  L
Sbjct  201  KYI-VDGQMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

150) YPTS_2447 in NC_010634


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  171 bits (634),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 93/230 (41%), Positives = 165/230 (72%), Gaps = 13/230 (5%)

Query  34   RAEVMISGTRVIYEEKQREGVVKVSNTGDMPVLLQAWIDKGDANARPEAIKVPFSVTPPV  93
            +A+++ISGTR++Y   Q++  V++ N G  P+L+Q+W+D G+ N+ P AIKVPF+ TPPV
Sbjct  26   WADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPV  85

Query  94   VRLDPKRDQTIR-LFRTDGGLAADRETLFWFNLLEVPPKPIQS-AAGGENKMQLAFRTRI  151
             R+DPK++QTI+ ++     L++DRE++FWFN+LEVPPK+ ++  ++++N +Q AFRTRI
Sbjct  86   SRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRI  145

Query  152  KMFYRPEGLTVLPAQAAKSLAFSMKGNQ----IVIKNASPYYITLRKLELRTSEKGPVLA  207
            K+FYRP+GL  L+++A+  L+  MK +Q    + ++N++PY++++  +EL ++ K     
Sbjct  146  KLFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGK-----  200

Query  208  NFTKINNKMVAPFSELSLPTSAKASINNSAQVFYSVINDQGGETQGTQKL  257
            ++  ++ +M AP++E S+   + A+  +S+++ YS IND GG  ++T  L
Sbjct  201  KYI-VDGQMAAPLTETSFTLKT-ATTTSSGKINYSFINDFGGIINATASL  248

151) YE105_C3428 in NC_015224


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  170 bits (630),  Expect = 4e-44, Method: Compositional matrix adjust.
 Identities = 91/223 (41%), Positives = 160/223 (72%), Gaps = 11/223 (4%)

Query  27   ASVVITGTRVIYPEKQKEVTVKVNNTGTSPVVLQSWIDSGDVNARPEALKVPFVLTPPIN  86
            A +VI+GTR++Y   QK+V V+++N G+ P+++Q+W+D+G+ N+ P A+KVPF  TPP++
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  87   RVEPNKSQTLRISYSGS-ALPKDKESVFWLNVLEIPAKA---DAGSSQNYLQMAFRSRIK  142
            R++P+K+QT++I Y+GS +LP D+ESVFW+NVLE+P+KA   + +++QN LQ AFR+RIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  143  LFFRPAGLVGNPNDAAQSLVW----TKVPGGLKATNPTPFHVSLVTVGI-TGSKTAPVEG  197
            LF+RP GL + + +A+  L W     +  + +   NPTP+ VS+ ++ + + +K   V+G
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  198  QMISPNNSLTFLL--PGNTAGNSVDFEFVNDYGALNKLTQPIK  238
            QM +P    +F L  +  T++  +++ F+ND+G++ + T +++
Sbjct  207  QMAAPLTETSFTLKTATTTSSGKINYSFINDFGGIINATASLQ  249

152) Y11_26071 in NC_017564


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  170 bits (630),  Expect = 4e-44, Method: Compositional matrix adjust.
 Identities = 91/223 (41%), Positives = 160/223 (72%), Gaps = 11/223 (4%)

Query  27   ASVVITGTRVIYPEKQKEVTVKVNNTGTSPVVLQSWIDSGDVNARPEALKVPFVLTPPIN  86
            A +VI+GTR++Y   QK+V V+++N G+ P+++Q+W+D+G+ N+ P A+KVPF  TPP++
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  87   RVEPNKSQTLRISYSGS-ALPKDKESVFWLNVLEIPAKA---DAGSSQNYLQMAFRSRIK  142
            R++P+K+QT++I Y+GS +LP D+ESVFW+NVLE+P+KA   + +++QN LQ AFR+RIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  143  LFFRPAGLVGNPNDAAQSLVW----TKVPGGLKATNPTPFHVSLVTVGI-TGSKTAPVEG  197
            LF+RP GL + + +A+  L W     +  + +   NPTP+ VS+ ++ + + +K   V+G
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  198  QMISPNNSLTFLL--PGNTAGNSVDFEFVNDYGALNKLTQPIK  238
            QM +P    +F L  +  T++  +++ F+ND+G++ + T +++
Sbjct  207  QMAAPLTETSFTLKTATTTSSGKINYSFINDFGGIINATASLQ  249

153) fimC in NC_007973


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  169 bits (625),  Expect = 1e-43, Method: Compositional matrix adjust.
 Identities = 94/222 (43%), Positives = 156/222 (71%), Gaps = 7/222 (3%)

Query  25   ASVVLTGTRVIYPESEREVSLKLTNEGDAPSLVQAWIDDGDPNATPENAKSLFVLTPPLF  84
            A +V++GTR++Y  ++++V+++L N G  P LVQ+W+D G+ N+ P   K  F  TPP+ 
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  85   RLDAKKGQTLRII-QLQQALSRDQESLFWLNVLEVPPIASSSKD--PQNSLQFAFRSRIK  141
            R+D+KKGQT++I+    Q+L+ D+ES+FW+NVLEVPP A+ + +  +QN+LQ AFR+RIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  142  LFFRPTGLPGDADSAPTKVTWRFVRKDDGHHVLTATNPTPYHITYTKVEATSGGHVYSND  201
            LF+RP GL + A+ AP+K+TWR ++ ++G  V+T  NPTPY +++  +E  S G  Y  D
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWR-MKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVD  205

Query  202  AGAMVNPGGTVEFAIDDASPVSGEPAQVSYTFISDYGAGVSG  243
             G M  P     F++  A+  S+  ++++Y+FI+D+G+ +++
Sbjct  206  -GQMAAPLTETSFTLKTATTTSS--GKINYSFINDFGGIINA  244

154) Psesu_2031 in NC_014924


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  169 bits (626),  Expect = 8e-44, Method: Compositional matrix adjust.
 Identities = 90/213 (43%), Positives = 147/213 (70%), Gaps = 5/213 (2%)

Query  24   ASVVVDGTRVVYPAARREVTINLRNPGETPSLAQSWLDAGNAEASPGDDPVPFALTPPIF  83
            A +V+ GTR+VY +A+++V + L N G  P L Q+WLD+GN ++ PG   VPF  TPP+ 
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  84   RLDPGRTQTLRLTYTG-EPLPTDRESLFWLNVLDIPPRAPLNPDAP--NRLELAFKHRLK  140
            R+DP + QT+++ YTG + LP+DRES+FW+NVL++PP+A  N +++  N L+ AF+ R+K
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  141  LFFRPRGLPGSALEAPARVQWRLRRDGERLQLEAVNPTPFHVSLSVIELGTGEARQAIHA  200
            LF+RP+GL + A EAPA++ WR++++  +  +   NPTP+ VS++ IEL +   +  +++
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  201  GMLAPLSSHRFDLPDGLQVPATGLPLEYRFIND  233
             M APL+   F L  +    +++  ++Y FIND
Sbjct  207  QMAAPLTETSFTLKTA--TTTSSGKINYSFIND  237

155) MYA_5176 in NC_017922


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  168 bits (623),  Expect = 1e-43, Method: Compositional matrix adjust.
 Identities = 92/194 (48%), Positives = 141/194 (73%), Gaps = 5/194 (2%)

Query  8    VVVLMSLLFCMNAQASVTLSGTRVVFPAADKEVTVQLTNDGKQPALVQAWIDKGNQRTSP  67
            V+ L + L+   A A + +SGTR+V+ +A+K+V V+L N G +P LVQ+W+D GN+ T P
Sbjct  13   VITLTGTLLSNVAWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEP  72

Query  68   DAIDVPFVITPTIFRVEPGKGQTLRILYTG-EPLPENKESLFWLNVLDVPPKVSGKDDV-  125
            +AI VPF  TP + R++P KGQT++I+YTG + LP ++ES+FW+NVL+VPPK + +++  
Sbjct  73   GAIKVPFNATPPVSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSA  132

Query  126  --NRLQFAFRTRIKLMYRPAGLAGTAGDAPAQLKWALGTDDGHRPVLKATNPSAYVVNLA  183
              N LQ AFRTRIKL YRP GL++ AG+APA+L W +  ++G ++V+   NP++Y V++ 
Sbjct  133  AQNTLQSAFRTRIKLFYRPQGLGDLAGEAPAKLTWRMKHEQG-KSVVTVNNPTPYFVSFN  191

Query  184  GVELKSGGKTYAAE  197
            ++EL S GK Y  +
Sbjct  192  SIELESTGKKYIVD  205

156) UMN179_00751 in NC_015460


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  168 bits (622),  Expect = 1e-43, Method: Compositional matrix adjust.
 Identities = 98/229 (43%), Positives = 160/229 (70%), Gaps = 9/229 (3%)

Query  14   ASSSYAGLIITGTRVIYPAQQKNVNVQISNVGTTPALMQTWIDNGQIDAAPDQIQTPFVI  73
            ++ + A+++I+GTR++Y + QK+VNV++ N G+ P L+QTW+D G+ ++ P+ I+ PF  
Sbjct  22   SNVAWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNA  81

Query  74   TPPISRIEANKGQTIRITHTG-EALPKDRESVFYLNVLDIPPKP--QGEKAPENYLQIAV  130
            TPP+SRI+++KGQTI+I  TG ++LP DRESVF +NVL++PPK+  + + A++N LQ A 
Sbjct  82   TPPVSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAF  141

Query  131  RSRIKLFYRPQNLPFPVEQAYEKVQWRLS---GKNDIIAKNPTPYFITYQDIAVHQNGHT  187
            R+RIKLFYRPQ L     +A  K+ WR+    GK+ +  +NPTPYF++++ I ++  G  
Sbjct  142  RTRIKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKK  201

Query  188  IDVKETGMVAPFSEKHFALKQA--IRGGSVNWRVINDYGTKVSGNSNLH  234
              V +  M AP++E  F+LK A    +G +N   IND+G  +++ ++L+
Sbjct  202  YIV-DGQMAAPLTETSFTLKTATTTSSGKINYSFINDFGGIINATASLQ  249

157) G655_20335 in NC_020912


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  168 bits (621),  Expect = 2e-43, Method: Compositional matrix adjust.
 Identities = 93/229 (41%), Positives = 164/229 (72%), Gaps = 10/229 (4%)

Query  17   LFSTLANAGITLGGTRVVLQAPAKEAAILVRNQASKDVMIQSWVEADNGADNRE---VPF  73
            L+S +A A+I ++GTR+V +++ K+  + + N++S+ +++Q+W++++N+  +     VPF
Sbjct  20   LLSNVAWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPF  79

Query  74   AITPALSRLGGNKQQTLRILFQG-EGLPSDRESVFRLNVQEIPQK------SASANTLQI  126
              TP++SR++ +K QT++I++ G + LPSDRESVF++NV E+P K      SA+ NTLQ 
Sbjct  80   NATPPVSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQS  139

Query  127  ALRQRIKVFYRPDNLSGTSAEAPGKLIWRLVRQGGKSVVEVSNDTAFHVSFANVKLKAGN  186
            A+R RIK+FYRP+ L++ ++EAP+KL WR+ ++ GKSVV V+N T++ VSF ++ L +  
Sbjct  140  AFRTRIKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTG  199

Query  187  ASYVVDADMVAPKSSRRFEIKGTPPGVSGNIEFQSVNDYGGLDKHSSSL  235
              Y+VD++M AP +   F +K +    SG+I++  +ND+GG+ + ++SL
Sbjct  200  KKYIVDGQMAAPLTETSFTLKTATTTSSGKINYSFINDFGGIINATASL  248

158) cupC2 in NC_008463


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  168 bits (621),  Expect = 2e-43, Method: Compositional matrix adjust.
 Identities = 93/229 (41%), Positives = 164/229 (72%), Gaps = 10/229 (4%)

Query  17   LFSTLANAGITLGGTRVVLQAPAKEAAILVRNQASKDVMIQSWVEADNGADNRE---VPF  73
            L+S +A A+I ++GTR+V +++ K+  + + N++S+ +++Q+W++++N+  +     VPF
Sbjct  20   LLSNVAWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPF  79

Query  74   AITPALSRLGGNKQQTLRILFQG-EGLPSDRESVFRLNVQEIPQK------SASANTLQI  126
              TP++SR++ +K QT++I++ G + LPSDRESVF++NV E+P K      SA+ NTLQ 
Sbjct  80   NATPPVSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQS  139

Query  127  ALRQRIKVFYRPDNLSGTSAEAPGKLIWRLVRQGGKSVVEVSNDTAFHVSFANVKLKAGN  186
            A+R RIK+FYRP+ L++ ++EAP+KL WR+ ++ GKSVV V+N T++ VSF ++ L +  
Sbjct  140  AFRTRIKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTG  199

Query  187  ASYVVDADMVAPKSSRRFEIKGTPPGVSGNIEFQSVNDYGGLDKHSSSL  235
              Y+VD++M AP +   F +K +    SG+I++  +ND+GG+ + ++SL
Sbjct  200  KKYIVDGQMAAPLTETSFTLKTATTTSSGKINYSFINDFGGIINATASL  248

159) XFLM_05560 in NC_017562


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  167 bits (619),  Expect = 3e-43, Method: Compositional matrix adjust.
 Identities = 101/250 (41%), Positives = 166/250 (67%), Gaps = 17/250 (6%)

Query  16   VLALSTCLCAQSAFAGIIIAGTRVVYPAQSRDVTVQVTNTGENPALLQTWMDDGDSKQTP  75
            V++L+  L ++ A A+I+I+GTR+VY +  +DV V++ N G  P L+QTW+D G+ +  P
Sbjct  13   VITLTGTLLSNVAWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEP  72

Query  76   DESKAPFLVTPPISRVEPGSGQALRLFFTGTTTLPEDRESLFWLNVLEIPPTPLEYSDKN  135
            +  K PF  TPP+SR++P  GQ++++ +TG+ TLP DRES+FW+NVLE+PP         
Sbjct  73   GAIKVPFNATPPVSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPK--------  124

Query  136  APTSADKSDSQNYLQLAFRSRIKVFYRPSKLKGTANEAPASLSWKVN---SNGQLLVSNP  192
             +   ++S +QN LQ AFR+RIK+FYRP  L + A EAPA L+W+++   +++ + V+NP
Sbjct  125  -ANKNENSAAQNTLQSAFRTRIKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNP  183

Query  193  TPYHVTLTRTEALDDKGRKETIDKIGVLLTPGQEYTFKANKSDGLSSRWKSVSFTYINDY  252
            TPY V++   E L+  G+K  +D  G + +P  E +F  + +   SS    +++++IND+
Sbjct  184  TPYFVSFNSIE-LESTGKKYIVD--GQMAAPLTETSFTLKTATTTSS--GKINYSFINDF  238

Query  253  GGIKTLSSNL  262
            GGI   +++L
Sbjct  239  GGIINATASL  248

160) Xfasm12_0064 in NC_010513


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  167 bits (619),  Expect = 3e-43, Method: Compositional matrix adjust.
 Identities = 101/250 (41%), Positives = 166/250 (67%), Gaps = 17/250 (6%)

Query  16   VLALSTCLCAQSAFAGIIIAGTRVVYPAQSRDVTVQVTNTGENPALLQTWMDDGDSKQTP  75
            V++L+  L ++ A A+I+I+GTR+VY +  +DV V++ N G  P L+QTW+D G+ +  P
Sbjct  13   VITLTGTLLSNVAWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEP  72

Query  76   DESKAPFLVTPPISRVEPGSGQALRLFFTGTTTLPEDRESLFWLNVLEIPPTPLEHSDKN  135
            +  K PF  TPP+SR++P  GQ++++ +TG+ TLP DRES+FW+NVLE+PP         
Sbjct  73   GAIKVPFNATPPVSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPK--------  124

Query  136  APTSADKSDGQNYLQLAFRSRIKVFYRPSKLKGTANEAPASLSWKVN---SNGQLLVSNP  192
             +   ++S +QN LQ AFR+RIK+FYRP  L + A EAPA L+W+++   +++ + V+NP
Sbjct  125  -ANKNENSAAQNTLQSAFRTRIKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNP  183

Query  193  TPYHVTLTRTEALDDKGRKETIDKIGVLLTPGQEYTFKANKSDGLSSRWKSVSFTYINDY  252
            TPY V++   E L+  G+K  +D  G + +P  E +F  + +   SS    +++++IND+
Sbjct  184  TPYFVSFNSIE-LESTGKKYIVD--GQMAAPLTETSFTLKTATTTSS--GKINYSFINDF  238

Query  253  GGIKTLSSNL  262
            GGI   +++L
Sbjct  239  GGIINATASL  248

161) XfasM23_0053 in NC_010577


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  167 bits (619),  Expect = 3e-43, Method: Compositional matrix adjust.
 Identities = 101/250 (41%), Positives = 166/250 (67%), Gaps = 17/250 (6%)

Query  16   VLALSTCLCAQSAFAGIIIAGTRVVYPAQSRDVTVQVTNTGENPALLQTWMDDGDSKQTP  75
            V++L+  L ++ A A+I+I+GTR+VY +  +DV V++ N G  P L+QTW+D G+ +  P
Sbjct  13   VITLTGTLLSNVAWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEP  72

Query  76   DESKAPFLVTPPISRVEPGSGQALRLFFTGTTTLPEDRESLFWLNVLEIPPTPLEYSDKN  135
            +  K PF  TPP+SR++P  GQ++++ +TG+ TLP DRES+FW+NVLE+PP         
Sbjct  73   GAIKVPFNATPPVSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPK--------  124

Query  136  APTSADKSDSQNYLQLAFRSRIKVFYRPSKLKGTANEAPASLSWKVN---SNGQLLVSNP  192
             +   ++S +QN LQ AFR+RIK+FYRP  L + A EAPA L+W+++   +++ + V+NP
Sbjct  125  -ANKNENSAAQNTLQSAFRTRIKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNP  183

Query  193  TPYHVTLTRTEALDDKGRKETIDKIGVLLTPGQEYTFKANKSDGLSSRWKSVSFTYINDY  252
            TPY V++   E L+  G+K  +D  G + +P  E +F  + +   SS    +++++IND+
Sbjct  184  TPYFVSFNSIE-LESTGKKYIVD--GQMAAPLTETSFTLKTATTTSS--GKINYSFINDF  238

Query  253  GGIKTLSSNL  262
            GGI   +++L
Sbjct  239  GGIINATASL  248

162) PD0061 in NC_004556


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  167 bits (619),  Expect = 3e-43, Method: Compositional matrix adjust.
 Identities = 101/250 (41%), Positives = 166/250 (67%), Gaps = 17/250 (6%)

Query  16   VLALSTCLCAQSAFAGIIIAGTRVVYPAQSRDVTVQVTNTGENPALLQTWMDDGDSKQTP  75
            V++L+  L ++ A A+I+I+GTR+VY +  +DV V++ N G  P L+QTW+D G+ +  P
Sbjct  13   VITLTGTLLSNVAWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEP  72

Query  76   DESKAPFLVTPPISRVEPGSGQALRLFFTGTTTLPEDRESLFWLNVLEIPPTPLEYSDKN  135
            +  K PF  TPP+SR++P  GQ++++ +TG+ TLP DRES+FW+NVLE+PP         
Sbjct  73   GAIKVPFNATPPVSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPK--------  124

Query  136  APTSADKSDSQNYLQLAFRSRIKVFYRPSKLKGTANEAPASLSWKVN---SNGQLLVSNP  192
             +   ++S +QN LQ AFR+RIK+FYRP  L + A EAPA L+W+++   +++ + V+NP
Sbjct  125  -ANKNENSAAQNTLQSAFRTRIKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNP  183

Query  193  TPYHVTLTRTEALDDKGRKETIDKIGVLLTPGQEYTFKANKSDGLSSRWKSVSFTYINDY  252
            TPY V++   E L+  G+K  +D  G + +P  E +F  + +   SS    +++++IND+
Sbjct  184  TPYFVSFNSIE-LESTGKKYIVD--GQMAAPLTETSFTLKTATTTSS--GKINYSFINDF  238

Query  253  GGIKTLSSNL  262
            GGI   +++L
Sbjct  239  GGIINATASL  248

163) fimB in NC_013282


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  167 bits (616),  Expect = 4e-43, Method: Compositional matrix adjust.
 Identities = 93/223 (42%), Positives = 163/223 (74%), Gaps = 15/223 (6%)

Query  34   ASIVITGTRVIYPSDAPEVSVKLDNKGTSPVLIQSWIDNGNADAAPETIQVPFILTPPIN  93
            A IVI+GTR++Y +   +V+V+L+NKG+ P+L+Q+W+D GN ++ P +I+VPF  TPP++
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  94   RVEPDKGQTLRITFTG-KLLPADRESVYWLNVLEIPA---KKASTVNDNYLQVAFRSRIK  149
            R++P KGQT++I +TG + LP+DRESV+W+NVLE+P+   K+ ++  +N LQ AFR+RIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  150  LFLRPKGLEGNANQAVTQVTWR---ANGQTIEAI-NPTPYFISL--VNLKVNGKT--INA  201
            LF RP+GL + A +A +++TWR    +G+++ ++ NPTPYF+S+  ++L   GK   +++
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  202  DMMSPKSTMTVKL---SGSPGNKLAGVFVNDYGALNEFEATLK  241
            +M +P +  +  L   + +++ K+   F+ND+G++ +  A+L+
Sbjct  207  QMAAPLTETSFTLKTATTTSSGKINYSFINDFGGIINATASLQ  249

164) A225_0949 in NC_018106


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  166 bits (614),  Expect = 6e-43, Method: Compositional matrix adjust.
 Identities = 94/175 (54%), Positives = 132/175 (76%), Gaps = 8/175 (4%)

Query  26   ADIVISGTRIIYPQSSKDVTVKMENRGNNPLLVQSWLDDGRDTVNPQELKLPFVVTPPVS  85
            ADIVISGTRI+Y  + KDV V++EN+G+ PLLVQ+WLD G D  +P  +K+PF  TPPVS
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  86   RIDPSKGQTVRITWT-QQPLAQDRESLFWFNVLEVPPKAK---DADSQNALQLAFRTRIK  141
            RIDP KGQT++I  T  Q L+ DRES+FWFNVLEVPPKA+   ++ +QN+LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  142  MFFRPDGLQGDPAVAAGNLQW---TQQGTALIA-NNSSPYYISMAKATITVKGKK  192
            +F+RP+GL + ++ A+++L W    +QG ++++ NN++PY++S     +   GKK
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKK  201

165) ES15_3731 in NC_017933


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  166 bits (612),  Expect = 8e-43, Method: Compositional matrix adjust.
 Identities = 94/223 (43%), Positives = 155/223 (70%), Gaps = 16/223 (7%)

Query  25   ASIVITGTRVIYPSDAPEVSVKLDNKGTSPVLIQSWIDNGNADAAPETIQVPFILTPPIN  84
            A IVI+GTR++Y +   +V+V+L+NKG+ P+L+Q+W+D GN ++ P +I+VPF  TPP++
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  85   RVEPDKGQTLRITFTG-KLLPADRESVYWLNVLEIPAK----KATLSDNYLQVAFRSRIK  139
            R++P KGQT++I +TG + LP+DRESV+W+NVLE+P+K      + ++N LQ AFR+RIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  140  LFLRPAGLEGNANDAVNHVTWRANGQ----TIEAANPTPYFISL--VNLTVNGKT--LDA  191
            LF RP GL + A +A   +TWR + +     +   NPTPYF+S+  ++L   GK   +D+
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  192  DMIAPKSTMTIKL---PGSPGNKLAGVFVNDYGALNEFEATLK  231
            +M AP +  ++ L     +++ K+   F+ND+G++ +  A+L+
Sbjct  207  QMAAPLTETSFTLKTATTTSSGKINYSFINDFGGIINATASLQ  249

166) ESA_03814 in NC_009778


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  165 bits (611),  Expect = 1e-42, Method: Compositional matrix adjust.
 Identities = 94/223 (43%), Positives = 155/223 (70%), Gaps = 16/223 (7%)

Query  25   ASIVITGTRVIYPSDAPEVSVKLDNKGTSPVLIQSWIDNGNADAAPETIQVPFILTPPIN  84
            A IVI+GTR++Y +   +V+V+L+NKG+ P+L+Q+W+D GN ++ P +I+VPF  TPP++
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  85   RVEPDKGQTLRITFTG-KLLPADRESVYWLNVLEIPAK----KATLSDNYLQVAFRSRIK  139
            R++P KGQT++I +TG + LP+DRESV+W+NVLE+P+K      + ++N LQ AFR+RIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  140  LFLRPAGLEGNANDAVNHVTWRANGQ----TIEAANPTPYFISL--VNLTVNGKT--LDA  191
            LF RP GL + A +A   +TWR + +     +   NPTPYF+S+  ++L   GK   +D+
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  192  DMIAPKSTMTIKL---PGSPGNKLAGVFVNDYGALNEFEATLK  231
            +M AP +  ++ L     +++ K+   F+ND+G++ +  A+L+
Sbjct  207  QMAAPLTETSFTLKTATTTSSGKINYSFINDFGGIINATASLQ  249

167) Bamb_4023 in NC_008391


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  165 bits (611),  Expect = 1e-42, Method: Compositional matrix adjust.
 Identities = 93/231 (41%), Positives = 160/231 (70%), Gaps = 6/231 (2%)

Query  7    FRTLTLAVTAFASQADASVVIAGTRVIFPSTEREVTIQLTNDSKRPALVQAWLDDGDSRA  66
            F  +TL+ T +++ A A +VI+GTR+++ +++++V ++L N + RP LVQ+WLD G+  +
Sbjct  11   FTVITLTGTLLSNVAWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNT  70

Query  67   LPENIDVPFTLTPSMFRMEAGNGQTLRLVHTG-EPLPADRESLFWLNVLEVPPKAAATEN  125
             P  I VPF  TP++ R+++ +GQT++++ TG + LP+DRES+FW+NVLEVPPKA   EN
Sbjct  71   EPGAIKVPFNATPPVSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNEN  130

Query  126  ---RNRIQLAFRSRIKLMYRPAGLAGNADDAPMQVDWRVVRGDGGYALEARNPTPYVVNF  182
               +N +Q AFR+RIKL YRP GL++ A++AP ++ WR+ + +G   +   NPTPY V+F
Sbjct  131  SAAQNTLQSAFRTRIKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSF  190

Query  183  GNVQLKSGGRKHDAGMGYVLPRSTQRFPIKDLAGAPAAGSTVEFGSINDWG  233
             +++L S G+K   +     P +   F +K  +++ ++++ ++++ IND G
Sbjct  191  NSIELESTGKKYIVDGQMAAPLTETSFTLK--TATTTSSGKINYSFINDFG  239

168) cupC2 in NC_002516


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  165 bits (611),  Expect = 1e-42, Method: Compositional matrix adjust.
 Identities = 93/229 (41%), Positives = 162/229 (71%), Gaps = 10/229 (4%)

Query  17   LFSTLANAGITLGGTRVVLQAPAKEAAILVRNQASNDVMIQSWVEADNGADKRE---VPF  73
            L+S +A A+I ++GTR+V +++ K+  + + N++S  +++Q+W++++N+        VPF
Sbjct  20   LLSNVAWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPF  79

Query  74   VITPALSRLGGNKQQTLRILFQG-EGLPSDRESVFRLNVQEIPQK------SASANTLQI  126
              TP++SR++ +K QT++I++ G + LPSDRESVF++NV E+P K      SA+ NTLQ 
Sbjct  80   NATPPVSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQS  139

Query  127  ALRQRIKVFYRPDNLSGTSAEAPGKLNWRLVRQGGKSVVEVSNDTAFHVSFANVKLKAGN  186
            A+R RIK+FYRP+ L++ ++EAP+KL WR+ ++ GKSVV V+N T++ VSF ++ L +  
Sbjct  140  AFRTRIKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTG  199

Query  187  ASYVVDADMVAPKSSRRFEVKGTPPGVSGNIEFQSVNDYGGLDKHSSSL  235
              Y+VD++M AP +   F +K +    SG+I++  +ND+GG+ + ++SL
Sbjct  200  KKYIVDGQMAAPLTETSFTLKTATTTSSGKINYSFINDFGGIINATASL  248

169) B5T_00872 in NC_018691


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  164 bits (607),  Expect = 2e-42, Method: Compositional matrix adjust.
 Identities = 90/212 (43%), Positives = 144/212 (68%), Gaps = 4/212 (1%)

Query  30   RVVYPGGDREVSVQLTNDGENPALVQVWIDAGDADAAPEQSDVPFIVLPPISRVEAGSGQ  89
            R+VY G++++V+V+L N G  P LVQ W+D+G+ ++ P    VPF   PP+SR+++  GQ
Sbjct  35   RIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVSRIDPKKGQ  94

Query  90   VLRISFTGGKVPPEDRESVYWLNVLDIPP-APKGEEGIPQNFLQLAVRSRIKLFYRPKGL  148
             ++I +TG++  P DRESV+W+NVL++PP A K E++ +QN LQ A R+RIKLFYRP+GL
Sbjct  95   TIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIKLFYRPQGL  154

Query  149  SGKANDAPEKLQWYLSRSGGQAVLKAKNPTPYHVTVSRLDILRGESEQVPVPVDEGMIAP  208
            ++ A +AP KL W + +  G++V+  +NPTPY V+ + +++   ES      VD  M AP
Sbjct  155  GDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIEL---ESTGKKYIVDGQMAAP  211

Query  209  GGSLEFALPASAPAAIGQVRMTTINDFGGRVA  240
                 F+L +++ ++ G++  + INDFGG + 
Sbjct  212  LTETSFTLKTATTTSSGKINYSFINDFGGIIN  243

170) CSSP291_17630 in NC_020260


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  164 bits (607),  Expect = 2e-42, Method: Compositional matrix adjust.
 Identities = 94/223 (43%), Positives = 155/223 (70%), Gaps = 16/223 (7%)

Query  25   ASIVITGTRVIYPSDAPEVSVKLDNKGTSPVLIQSWIDNGNADAVPETIQVPFILTPPIN  84
            A IVI+GTR++Y +   +V+V+L+NKG+ P+L+Q+W+D GN ++ P +I+VPF  TPP++
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  85   RVEPDKGQTLRITFTG-KLLPADRESVYWLNVLEIPAK----KATLSDNYLQVAFRSRIK  139
            R++P KGQT++I +TG + LP+DRESV+W+NVLE+P+K      + ++N LQ AFR+RIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  140  LFLRPAGLEGNANDAVNHVTWRANGQ----TIEAANPTPYFISL--VNLTVNGKT--LDA  191
            LF RP GL + A +A   +TWR + +     +   NPTPYF+S+  ++L   GK   +D+
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  192  DMIAPKSTMTIKL---PGSPGNKLAGVFVNDYGALNEFEATLK  231
            +M AP +  ++ L     +++ K+   F+ND+G++ +  A+L+
Sbjct  207  QMAAPLTETSFTLKTATTTSSGKINYSFINDFGGIINATASLQ  249

171) ROD_27791 in NC_013716


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  164 bits (607),  Expect = 3e-42, Method: Compositional matrix adjust.
 Identities = 93/227 (41%), Positives = 151/227 (67%), Gaps = 8/227 (3%)

Query  16   SLATHSTLAGMTIFGTRVIFPGSEKEQTVRTNNKNDTPTLVQVWVDDGNKNTDINNIKVP  75
            +L ++ + A++ I GTR+++ G++K+  VR +NK   P LVQ W+D GN NT+   IKVP
Sbjct  19   TLLSNVAWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVP  78

Query  76   FTATPPVYRVEPGKGQSVRLIYNG-MPLPQDRESVYWFNMLEIPPLNEKLKDT---DRLE  131
            F ATPPV R++P KGQ+++++Y G   LP DRESV+WFN+LE+PP  +K  ++   + L+
Sbjct  79   FNATPPVSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQ  138

Query  132  LAFRTRIKIFYRPTALKSSSASEFEKLRWEII-SPARG-IKVSNPTPYYFSFDSAIAYSG  189
             AFRTRIK+FYRP +L   ++    KL W +    +++ + V+NPTPY+ SF+S    S 
Sbjct  139  SAFRTRIKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELEST  198

Query  190  GAQYPLVANMIPPFGSKEFVLESKNKTPATISSVEVRLINDYGGVVK  236
            G +Y + ++M +P+    F L  K  T ++ + ++  +IND+GG+++
Sbjct  199  GKKYIVDGQMAAPLTETSFTL--KTATTTSSGKINYSFINDFGGIIN  243

172) CKO_05123 in NC_009792


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  163 bits (602),  Expect = 6e-42, Method: Compositional matrix adjust.
 Identities = 97/231 (42%), Positives = 153/231 (67%), Gaps = 15/231 (6%)

Query  22   ADVVINGTRIVFNAKDKESTVQLKNRGNNPYLLQIWMDDGNPNAKPGEITVPFLIAPPVV  81
            AD+VI+GTRIV+ + +K+  V+L N+G+ P L+Q W+D GN N+ PG I VPF  +PPV 
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  82   RIDPAKGQAVRIM-ATNPSLPQDRESLFWFNMLEIPPKA--QDSTSGKTHMQLAFRTRIK  138
            RIDP KGQ+++IM + + +LP DRES+FWFN+LE+PPKA  +++++++  +Q AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  139  LFYRPDNLQPTPLQSYKELK---IFQQGNNIKVVND-SPYYITFSKVEIRRTTGSAVLAA  194
            LFYRP+ L   + ++   L      +QG+++  VN+ +PY+++F+ +E+  T    ++ +
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDG  206

Query  195  VENFPQRMVKPKSEIVFPLANKKSTQLSGASVFYSVINDYGGETTNEQKLQ  245
                  +M  P +E  F L  K +T  S++ + YS IND+GG       LQ
Sbjct  207  ------QMAAPLTETSFTL--KTATTTSSGKINYSFINDFGGIINATASLQ  249

173) PADK2_20780 in NC_018080


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  163 bits (601),  Expect = 6e-42, Method: Compositional matrix adjust.
 Identities = 92/229 (41%), Positives = 165/229 (73%), Gaps = 10/229 (4%)

Query  17   LFSTLANAGITLGGTRVVLQAPAKEAAILVRNQASKDVMIQSWVEADNGADKRE---VPF  73
            L+S +A A+I ++GTR+V +++ K+  + + N++S+ +++Q+W++++N+        VPF
Sbjct  20   LLSNVAWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPF  79

Query  74   VITPALSRLGGNKQQTLRILFQG-EGLPSDRESVFRLNVQEIPQK------SASANTLQI  126
              TP++SR++ +K QT++I++ G + LPSDRESVF++NV E+P K      SA+ NTLQ 
Sbjct  80   NATPPVSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQS  139

Query  127  ALRQRIKVFYRPDNLSGTSAEAPGKLSWRLVRQGGKSVVEVSNDTAFHVSLASVKLKAGN  186
            A+R RIK+FYRP+ L++ ++EAP+KL+WR+ ++ GKSVV V+N T++ VS+ S+ L +  
Sbjct  140  AFRTRIKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTG  199

Query  187  AYYVVDADMVAPKSSRRFEIKGTPSGVSGNVEFQSVNDYGGLDKHSSSL  235
              Y+VD++M AP +   F +K + +  SG++++  +ND+GG+ + ++SL
Sbjct  200  KKYIVDGQMAAPLTETSFTLKTATTTSSGKINYSFINDFGGIINATASL  248

174) GEM_0341 in NC_018513


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  163 bits (601),  Expect = 8e-42, Method: Compositional matrix adjust.
 Identities = 89/221 (41%), Positives = 149/221 (68%), Gaps = 7/221 (3%)

Query  30   VVISGTRVIYPEKEREVTVKLTNNGDRPSLVQAWVDDGIANALPDDSKVPFTLTPPLFRL  89
            +VISGTR++Y   +++V V+L N+G RP LVQ+W+D G  N+ P+  KVPF  TPP+ R+
Sbjct  29   IVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVSRI  88

Query  90   DPNKGQSLRLIYT-KEPLAQDKETLYWLNVLDVPPQA--TDDPDTPNLLQLAFRSRIKLF  146
            DP+KGQ+++++YT  + L+ D+E+++W+NVL+VPP+A   +++ + N LQ AFR+RIKLF
Sbjct  89   DPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIKLF  148

Query  147  FRPAALQGVADESAEKVTWNFAPKADGGYALQAKNPTPYHVTFTRLTVKSGGATWSNDKG  206
            +RP +L ++A+E++ K+TW      +G   +  +NPTPY V+F  + + S G     D G
Sbjct  149  YRPQGLGDLAGEAPAKLTWRMK-HEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVD-G  206

Query  207  GMVKPGATEQFDVGNVPPLPAGPIEVDYTFLNDYGGGVEGN  247
             M  P +   F +      ++G   ++Y+F+ND+GG +++ 
Sbjct  207  QMAAPLTETSFTLKTATTTSSG--KINYSFINDFGGIINAT  245

175) bgla_1g22260 in NC_015381


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  162 bits (598),  Expect = 1e-41, Method: Compositional matrix adjust.
 Identities = 90/217 (42%), Positives = 152/217 (71%), Gaps = 7/217 (3%)

Query  27   ASVTLSGTRVVFDASEPEVTIQLSNQGKQPALIQAWLDTGDERAEPERIEVPFMVTPTLF  86
            A + +SGTR+V+ +++ +V ++L N+G +P L+Q+WLDTG++ +EP  I VPF  TP + 
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  87   RIEAGKGQALRIIHTG-EPLPSNRESLFWLNVLDVPPKASGGDEV---NRLQFAFRTRIK  142
            RI++ KGQ+++I+ TG + LPS+RES+FW+NVL+VPPKA+  ++    N LQ AFRTRIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  143  MMYRPADLPGTPDDAPASLRWTLATDASQRPVLQASNPSAYVVNLAGVELQSGGKTYPAG  202
            + YRP +L + +++APA L W +  + + ++V+  +NP++Y V++ ++EL+S GK Y  +
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQG-KSVVTVNNPTPYFVSFNSIELESTGKKYIVD  205

Query  203  FGHVLPGETASFPLVGASSTALPDATVVYSSVDDWGS  239
                 P   +SF L  A++T+   + + YS ++D G+
Sbjct  206  GQMAAPLTETSFTLKTATTTS--SGKINYSFINDFGG  240

176) ecpD1 in NC_021237


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  162 bits (599),  Expect = 1e-41, Method: Compositional matrix adjust.
 Identities = 93/225 (42%), Positives = 150/225 (67%), Gaps = 10/225 (4%)

Query  20   ILSGAAHAGIVLEGTRLVYPADAREVTLKLSNTGSVALLAQSWIDEGDANKSPEEIKVPF  79
            +LS  A A+IV+ GTR+VY +  ++V ++L N GS +LL Q+W+D G+ N  P  IKVPF
Sbjct  20   LLSNVAWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPF  79

Query  80   LLAPAVSRVEAGGSAILRVSYS-KEPLAKDRESLFWLNVLETPPRRKQDE-----NVLQF  133
              +P+VSR+++  +  +++ Y+  + L+ DRES+FW+NVLE PP+ +++E     N LQ 
Sbjct  80   NATPPVSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQS  139

Query  134  AFRTRIKIFFRPDNLIGNAGMAGEKLKWELSRAGASQVPVIKVYNPTPYYVSFGRMEVAV  193
            AFRTRIK+F+RP+ L + AG A  KL W + +  +   +V+ V NPTPY+VSF  +E+  
Sbjct  140  AFRTRIKLFYRPQGLGDLAGEAPAKLTWRMKHEQGK--SVVTVNNPTPYFVSFNSIELES  197

Query  194  SGRRIDLKPGMVAPFGYESFSWPAGAPSQPAKASIEYEVIDDFGG  238
            +G++  +   M AP+   SF+  +++ + ++K  I+Y  I+DFGG
Sbjct  198  TGKKYIVDGQMAAPLTETSFTLKTATTTSSGK--INYSFINDFGG  240

177) cupB2 in NC_004129


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  162 bits (599),  Expect = 1e-41, Method: Compositional matrix adjust.
 Identities = 94/225 (42%), Positives = 149/225 (67%), Gaps = 10/225 (4%)

Query  20   ILSGVAHAGIVLEGTRLVYPAEAREVTLKLSNTGSVALLAQSWIDEGDANKSPEEIKVPF  79
            +LS VA A+IV+ GTR+VY +  ++V ++L N GS +LL Q+W+D G+ N  P  IKVPF
Sbjct  20   LLSNVAWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPF  79

Query  80   LLAPAVSRVEAGGSAILRVSYS-KEPLAKDRESLFWLNVLETPPRRKQDE-----NVLQF  133
              +P+VSR+++  +  +++ Y+  + L+ DRES+FW+NVLE PP+ +++E     N LQ 
Sbjct  80   NATPPVSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQS  139

Query  134  AFRTRIKIFFRPDNLIGNAGMAGEKLKWELSRAGASQVPVIKVFNPTPYYVSFGRMEVAV  193
            AFRTRIK+F+RP+ L + AG A  KL W + +  +   +V+ V NPTPY+VSF  +E+  
Sbjct  140  AFRTRIKLFYRPQGLGDLAGEAPAKLTWRMKHEQGK--SVVTVNNPTPYFVSFNSIELES  197

Query  194  SGRRIDLKPGMVAPFGYESFPWPASAPSQPTKASIEYEVIDDFGG  238
            +G++  +   M AP+   SF   +++ + + K  I+Y  I+DFGG
Sbjct  198  TGKKYIVDGQMAAPLTETSFTLKTATTTSSGK--INYSFINDFGG  240

178) aef2B in NC_014922


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  162 bits (599),  Expect = 1e-41, Method: Compositional matrix adjust.
 Identities = 94/230 (41%), Positives = 157/230 (69%), Gaps = 9/230 (3%)

Query  11   LLSSTVQANVVITGTRVIYPENEKTITVKLDNPGKKASLVQAWIDEGDPDADPRHIQVPF  70
            LLS+   A++VI+GTR++Y   +K + V+L+N G ++ LVQ+W+D G+ +++P  I+VPF
Sbjct  20   LLSNVAWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPF  79

Query  71   AITPPVSRIESQSGQTLRITYTGTKVLPKDRESLFYFNLLDIPPKPSKEFLDSNQNFLQF  130
              TPPVSRI+++ GQT++I YTG++ LP DRES+F FN+L++PPK++K+   + QN LQ 
Sbjct  80   NATPPVSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQS  139

Query  131  AVRSRLKFFYRPENLPMKPEDAYKMVRW----QAVSNGVNVDNPTPYYLSYVSAEVNRTA  186
            A R+R+K+FYRP+ L   + +A   + W    +   + V V+NPTPY++S+ S E++ T+
Sbjct  140  AFRTRIKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTG  199

Query  187  LK---KVRMVAPFSQAVFEGK--GIHKGDKLKWYLVNDYGGDSAGEAILQ  231
             K     +M AP++++ F  K      ++K++  ++ND+GG   + A LQ
Sbjct  200  KKYIVDGQMAAPLTETSFTLKTATTTSSGKINYSFINDFGGIINATASLQ  249

179) M062_05415 in NC_021577


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  162 bits (598),  Expect = 1e-41, Method: Compositional matrix adjust.
 Identities = 92/229 (41%), Positives = 164/229 (72%), Gaps = 10/229 (4%)

Query  29   LFSTLANAGITLGGTRVVLQAPAKEAAILVRNQASKDVMIQSWVEADNGADKRE---VPF  85
            L+S +A A+I ++GTR+V +++ K+  + + N++S+ +++Q+W++++N+        VPF
Sbjct  20   LLSNVAWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPF  79

Query  86   VITPALSRLGGNKQQTLRILFQG-EGLPSDRESVFRLNVQEIPQK------SASANTLQI  138
              TP++SR++ +K QT++I++ G + LPSDRESVF++NV E+P K      SA+ NTLQ 
Sbjct  80   NATPPVSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQS  139

Query  139  ALRQRIKIFYRPDNLSGTSAEAPGKLNWRLVRQGGKSVVEVSNDTAFHVSLASVKLKAGN  198
            A+R RIK+FYRP+ L++ ++EAP+KL WR+ ++ GKSVV V+N T++ VS+ S+ L +  
Sbjct  140  AFRTRIKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTG  199

Query  199  AYYVVDADMVAPKSSRRFEIKGTPSGVSGNVEFQSVNDYGGLDKHSSSL  247
              Y+VD++M AP +   F +K + +  SG++++  +ND+GG+ + ++SL
Sbjct  200  KKYIVDGQMAAPLTETSFTLKTATTTSSGKINYSFINDFGGIINATASL  248

180) cupC2 in NC_017548


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  162 bits (600),  Expect = 8e-42, Method: Compositional matrix adjust.
 Identities = 92/229 (41%), Positives = 165/229 (73%), Gaps = 10/229 (4%)

Query  23   LFSTLANAGITLGGTRVVLQAPAKEAAILVRNQASKDVMIQSWVEADNGADKRE---VPF  79
            L+S +A A+I ++GTR+V +++ K+  + + N++S+ +++Q+W++++N+        VPF
Sbjct  20   LLSNVAWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPF  79

Query  80   VITPALSRLGGNKQQTLRILFQG-EGLPSDRESVFRLNVQEIPQK------SASANTLQI  132
              TP++SR++ +K QT++I++ G + LPSDRESVF++NV E+P K      SA+ NTLQ 
Sbjct  80   NATPPVSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQS  139

Query  133  ALRQRIKVFYRPDNLSGTSAEAPGKLSWRLVRQGGKSVVEVSNDTAFHVSLASVKLKAGN  192
            A+R RIK+FYRP+ L++ ++EAP+KL+WR+ ++ GKSVV V+N T++ VS+ S+ L +  
Sbjct  140  AFRTRIKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTG  199

Query  193  AYYVVDADMVAPKSSRRFEIKGTPSGVSGNVEFQSVNDYGGLDKHSSSL  241
              Y+VD++M AP +   F +K + +  SG++++  +ND+GG+ + ++SL
Sbjct  200  KKYIVDGQMAAPLTETSFTLKTATTTSSGKINYSFINDFGGIINATASL  248

181) cupC2 in NC_011770


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  162 bits (600),  Expect = 9e-42, Method: Compositional matrix adjust.
 Identities = 92/229 (41%), Positives = 164/229 (72%), Gaps = 10/229 (4%)

Query  17   LFSTLANAGITLGGTRVVLQAPAKEAAILVRNQASKDVMIQSWVEADNGADKRE---VPF  73
            L+S +A A+I ++GTR+V +++ K+  + + N++S+ +++Q+W++++N+        VPF
Sbjct  20   LLSNVAWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPF  79

Query  74   VITPALSRLGGNKQQTLRILFQG-EGLPSDRESVFRLNVQEIPQK------SASANTLQI  126
              TP++SR++ +K QT++I++ G + LPSDRESVF++NV E+P K      SA+ NTLQ 
Sbjct  80   NATPPVSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQS  139

Query  127  ALRQRIKVFYRPDNLSGTSAEAPGKLNWRLVRQGGKSVVEVSNDTAFHVSLASVKLKAGN  186
            A+R RIK+FYRP+ L++ ++EAP+KL WR+ ++ GKSVV V+N T++ VS+ S+ L +  
Sbjct  140  AFRTRIKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTG  199

Query  187  AYYVVDADMVAPKSSRRFEIKGTPSGVSGNVEFQSVNDYGGLDKHSSSL  235
              Y+VD++M AP +   F +K + +  SG++++  +ND+GG+ + ++SL
Sbjct  200  KKYIVDGQMAAPLTETSFTLKTATTTSSGKINYSFINDFGGIINATASL  248

182) aef2B in NC_014920


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  161 bits (596),  Expect = 2e-41, Method: Compositional matrix adjust.
 Identities = 97/230 (43%), Positives = 157/230 (69%), Gaps = 9/230 (3%)

Query  11   LLSSTAQANVVITGTRVIYPENEKTITVKLDNPGKKASLVQAWIDEGDPDSDPRYIQVPF  70
            LLS+ A A++VI+GTR++Y   +K + V+L+N G ++ LVQ+W+D G+ +++P  I+VPF
Sbjct  20   LLSNVAWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPF  79

Query  71   AITPPVSRIESQSGQTLRITYTGAKALPKDRESLFYFNLLDIPPKPSKAFLESNQNFLQF  130
              TPPVSRI+++ GQT++I YTG+++LP DRES+F FN+L++PPK++K    + QN LQ 
Sbjct  80   NATPPVSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQS  139

Query  131  AVRSRLKFFYRPENLPMKPEEAYKMVRW----QAVSNGVNVNNPTPYYLSYVSAEVNRTP  186
            A R+R+K+FYRP+ L   + EA   + W    +   + V VNNPTPY++S+ S E++ T 
Sbjct  140  AFRTRIKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTG  199

Query  187  LK---KVRMVAPFSQAVFEGK--GIHKGDKLKWYLVNDYGGDSTGEAVLQ  231
             K     +M AP++++ F  K      ++K++  ++ND+GG   + A LQ
Sbjct  200  KKYIVDGQMAAPLTETSFTLKTATTTSSGKINYSFINDFGGIINATASLQ  249

183) fimB3 in NC_010170


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  161 bits (594),  Expect = 3e-41, Method: Compositional matrix adjust.
 Identities = 106/222 (48%), Positives = 166/222 (75%), Gaps = 7/222 (3%)

Query  30   VIGATRIIYDAAGGEQTVRLTNKGESPSLVQTWLDTGAVQAERGTLEVPFVVSPPMSRVD  89
            VI++TRI+Y +A  +  VRL NKG  P LVQTWLDTG  ++E G++ VPF  +PP+SR+D
Sbjct  30   VISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVSRID  89

Query  90   PGKSQTLRIIHSG-EPMPQDRESVFWLNVLDVPARP----AANSENFLQFSFRSRIKLFF  144
            P K+QT++I+ +G + +P DRESVFW+NVL+VP+++     + ++N LQ +FR+RIKLF+
Sbjct  90   PKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIKLFY  149

Query  145  RpaglagtaaqapaqltWQLATKDSQPILQVSNPTPYHVSFAAVELATGGQTLAVQEPGM  204
            RP GL++ A++APA+LTW++   ++++++ V+NPTPY VSF ++EL + G+   V+   M
Sbjct  150  RPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDGQ-M  208

Query  205  LAPFEtraltlpraataSSGTRVRYQFVNDYGGITEEEAALQ  246
             AP+   ++TL  A+T+SSG ++ Y F+ND+GGI +  A+LQ
Sbjct  209  AAPLTETSFTLKTATTTSSG-KINYSFINDFGGIINATASLQ  249

184) PMI0535 in NC_010554


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  157 bits (581),  Expect = 3e-40, Method: Compositional matrix adjust.
 Identities = 102/244 (42%), Positives = 166/244 (69%), Gaps = 11/244 (4%)

Query  4    FILIFLT-LFVSTVAQASVVIMGTRVVYPATQKSINVQLNNNDESPALIQSWLDTGNAAA  62
            F +I LT  ++S VA A +VI GTR+VY ++QK +NV+L+N++  P L+Q+WLDTGN  +
Sbjct  11   FTVITLTGTLLSNVAWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNT  70

Query  63   APDSIHVPFIITPPIFRMEPKSGQTIRIVYTG-ESLPQDRESLFYLNVLDIPAKPKVeen  121
             P++I VPF  TPP+ R++PK GQTI+I+YTG ++LP DRES+F +NVL++P+K++ +EN
Sbjct  71   EPGAIKVPFNATPPVSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNEN  130

Query  122  sensegnnnYLQLAVRSRIKFFFRPDNLNVTPDDAYQKVTW---HQEGALRIKAINPTPY  178
            S   +     LQ A R+RIK+F+RP+ L   +++A  K+TW   H++G   +   NPTPY
Sbjct  131  SAAQNT----LQSAFRTRIKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPY  186

Query  179  YITYNKISVGQDKQLTPVEQSGMIAPFSSKIFSLK-EKPTLTNKVTWVVVNDYGGYQQGE  237
            ++++N I +    +   V+ + M AP++   F+LK    T + K+    +ND+GG  ++ 
Sbjct  187  FVSFNSIELESTGKKYIVD-GQMAAPLTETSFTLKTATTTSSGKINYSFINDFGGIINAT  245

Query  238  STLE  241
            ++L+
Sbjct  246  ASLQ  249

185) mrkB in NC_021591


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  156 bits (575),  Expect = 9e-40, Method: Compositional matrix adjust.
 Identities = 93/220 (43%), Positives = 151/220 (69%), Gaps = 8/220 (3%)

Query  28   NGTRIIYPGKQREVTVQLSNNGTSPALIQSWIDEGDAKTTPENSKAPFIVSPPISRVEPA  87
            +GTRI+Y G Q++V V+L N+G+ P L+Q+W+D G+ +T P   K PF  +PP+SR++P 
Sbjct  32   SGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVSRIDPK  91

Query  88   TGQALRVSLTTS-ALAQDKESLFWLNVLEIppaptgassstpENFLQVAFRTRVKLLYRP  146
             GQ++++  T S +L+ D+ES+FW+NVLE+PP +    +S+++N LQ AFRTR+KL+YRP
Sbjct  92   KGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIKLFYRP  151

Query  147  AGLTGEANDAPEKLQWRF----SGAGVSVKNPTPYYVSFTEINAVVNQKKVPLAPHGDML  202
             GL + A +AP KL WR     + + V+V+NPTPY+VSF  I+     KK     +G+M 
Sbjct  152  QGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKK--YIVDGQMA  209

Query  203  APGQEKTLSF-SGDSSRIADVAFTTINDFGGRVSRTKNKQ  241
            AP  E ++++ ++ ++  + + ++ INDFGG ++ T + Q
Sbjct  210  APLTETSFTLKTATTTSSGKINYSFINDFGGIINATASLQ  249

186) M621_07760 in NC_021659


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  156 bits (575),  Expect = 9e-40, Method: Compositional matrix adjust.
 Identities = 93/220 (43%), Positives = 151/220 (69%), Gaps = 8/220 (3%)

Query  28   NGTRIIYPGKQREVTVQLSNNGTSPALIQSWIDEGDAKTTPENSKAPFIVSPPISRVEPA  87
            +GTRI+Y G Q++V V+L N+G+ P L+Q+W+D G+ +T P   K PF  +PP+SR++P 
Sbjct  32   SGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVSRIDPK  91

Query  88   TGQALRVSLTTS-ALAQDKESLFWLNVLEIppaptgassstpENFLQVAFRTRVKLLYRP  146
             GQ++++  T S +L+ D+ES+FW+NVLE+PP +    +S+++N LQ AFRTR+KL+YRP
Sbjct  92   KGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIKLFYRP  151

Query  147  AGLTGEANDAPEKLQWRF----SGAGVSVKNPTPYYVSFTEINAVVNQKKVPLAPHGDML  202
             GL + A +AP KL WR     + + V+V+NPTPY+VSF  I+     KK     +G+M 
Sbjct  152  QGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKK--YIVDGQMA  209

Query  203  APGQEKTLSF-SGDSSRIADVAFTTINDFGGRVSRTKNKQ  241
            AP  E ++++ ++ ++  + + ++ INDFGG ++ T + Q
Sbjct  210  APLTETSFTLKTATTTSSGKINYSFINDFGGIINATASLQ  249

187) fimB in NC_017223


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  155 bits (572),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 92/214 (43%), Positives = 148/214 (70%), Gaps = 12/214 (5%)

Query  31   ITGTRVIYNAGSPETTVKMSNEGQAPALMQAWIDDGNAEAKPDEVQVPFFLTPPLARVDP  90
            I+GTR++Y ++  +  V++ N G  P L+Q+W+D GN ++ P+ ++VPF  TPP++R+DP
Sbjct  31   ISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVSRIDP  90

Query  91   GKGQTLRIFFNGYPDGKTLPSDRESVFWLNVLEVPPKATPEE---GHGVLQLTIRSRLKL  147
             KGQT++I + G   ++TLPSDRESVFW+NVLEVPPKA  +E   ++  LQ ++R+R+KL
Sbjct  91   KKGQTIKIMYTG---SQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIKL  147

Query  148  FYRPKGLSGNPLTAAADLTFKRKPN---GVLEVHNPTPYYVNLQKLEVGENGAHGSKTPW  204
            FYRP+GL++ +  A+A LT + K +   +V+ V+NPTPY+V+++ +E+   G        
Sbjct  148  FYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDGQ  207

Query  205  MLAPLSSDELRLKGTGAKS---VQYWAIDDFGGV  235
            M APL+   + LK + + S   ++Y  I+DFGG+
Sbjct  208  MAAPLTETSFTLKTATTTSSGKINYSFINDFGGI  241

188) fimB in NC_002929


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  155 bits (572),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 92/214 (43%), Positives = 148/214 (70%), Gaps = 12/214 (5%)

Query  31   ITGTRVIYNAGSPETTVKMSNEGQAPALMQAWIDDGNAEAKPDEVQVPFFLTPPLARVDP  90
            I+GTR++Y ++  +  V++ N G  P L+Q+W+D GN ++ P+ ++VPF  TPP++R+DP
Sbjct  31   ISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVSRIDP  90

Query  91   GKGQTLRIFFNGYPDGKTLPSDRESVFWLNVLEVPPKATPEE---GHGVLQLTIRSRLKL  147
             KGQT++I + G   ++TLPSDRESVFW+NVLEVPPKA  +E   ++  LQ ++R+R+KL
Sbjct  91   KKGQTIKIMYTG---SQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIKL  147

Query  148  FYRPKGLSGNPLTAAADLTFKRKPN---GVLEVHNPTPYYVNLQKLEVGENGAHGSKTPW  204
            FYRP+GL++ +  A+A LT + K +   +V+ V+NPTPY+V+++ +E+   G        
Sbjct  148  FYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDGQ  207

Query  205  MLAPLSSDELRLKGTGAKS---VQYWAIDDFGGV  235
            M APL+   + LK + + S   ++Y  I+DFGG+
Sbjct  208  MAAPLTETSFTLKTATTTSSGKINYSFINDFGGI  241

189) fimB in NC_018518


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  155 bits (571),  Expect = 2e-39, Method: Compositional matrix adjust.
 Identities = 92/214 (43%), Positives = 148/214 (70%), Gaps = 12/214 (5%)

Query  61   ITGTRVIYNAGSPETTVKMSNEGQAPALMQAWIDDGNAEAKPDEVQVPFFLTPPLARVDP  120
            I+GTR++Y ++  +  V++ N G  P L+Q+W+D GN ++ P+ ++VPF  TPP++R+DP
Sbjct  31   ISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVSRIDP  90

Query  121  GKGQTLRIFFNGYPDGKTLPSDRESVFWLNVLEVPPKATPEE---GHGVLQLTIRSRLKL  177
             KGQT++I + G   ++TLPSDRESVFW+NVLEVPPKA  +E   ++  LQ ++R+R+KL
Sbjct  91   KKGQTIKIMYTG---SQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIKL  147

Query  178  FYRPKGLSGNPLTAAADLTFKRKPN---GVLEVHNPTPYYVNLQKLEVGENGAHGSKTPW  234
            FYRP+GL++ +  A+A LT + K +   +V+ V+NPTPY+V+++ +E+   G        
Sbjct  148  FYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDGQ  207

Query  235  MLAPLSSDELRLKGTGAKS---VQYWAIDDFGGV  265
            M APL+   + LK + + S   ++Y  I+DFGG+
Sbjct  208  MAAPLTETSFTLKTATTTSSGKINYSFINDFGGI  241

190) fimB in NC_019382


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  154 bits (569),  Expect = 3e-39, Method: Compositional matrix adjust.
 Identities = 92/214 (43%), Positives = 148/214 (70%), Gaps = 12/214 (5%)

Query  61   ITGTRVIYNAGSPETTVKMSNEGQAPALMQAWIDDGNAEAKPDEVQVPFFLTPPLARVDP  120
            I+GTR++Y ++  +  V++ N G  P L+Q+W+D GN ++ P+ ++VPF  TPP++R+DP
Sbjct  31   ISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVSRIDP  90

Query  121  GKGQTLRIFFNGYPDGKTLPSDRESVFWLNVLEVPPKATPEE---GHGVLQLTIRSRLKL  177
             KGQT++I + G   ++TLPSDRESVFW+NVLEVPPKA  +E   ++  LQ ++R+R+KL
Sbjct  91   KKGQTIKIMYTG---SQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIKL  147

Query  178  FYRPKGLPGNPLTAAADLTFKRK---ANGVLEVHNPTPYYVNLQKLEVGENGAHGSKTPW  234
            FYRP+GL + +  A+A LT + K   +++V+ V+NPTPY+V+++ +E+   G        
Sbjct  148  FYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDGQ  207

Query  235  MLAPLSSDELRLKGTGAKS---VQYWAIDDFGGV  265
            M APL+   + LK + + S   ++Y  I+DFGG+
Sbjct  208  MAAPLTETSFTLKTATTTSSGKINYSFINDFGGI  241

191) fimB in NC_018829


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  154 bits (569),  Expect = 3e-39, Method: Compositional matrix adjust.
 Identities = 92/214 (43%), Positives = 148/214 (70%), Gaps = 12/214 (5%)

Query  61   ITGTRVIYNAGSPETTVKMSNEGQAPALMQAWIDDGNAEAKPDEVQVPFFLTPPLARVDP  120
            I+GTR++Y ++  +  V++ N G  P L+Q+W+D GN ++ P+ ++VPF  TPP++R+DP
Sbjct  31   ISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVSRIDP  90

Query  121  GKGQTLRIFFNGYPDGKTLPSDRESVFWLNVLEVPPKATPEE---GHGVLQLTIRSRLKL  177
             KGQT++I + G   ++TLPSDRESVFW+NVLEVPPKA  +E   ++  LQ ++R+R+KL
Sbjct  91   KKGQTIKIMYTG---SQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIKL  147

Query  178  FYRPKGLPGNPLTAAADLTFKRK---ANGVLEVHNPTPYYVNLQKLEVGENGAHGSKTPW  234
            FYRP+GL + +  A+A LT + K   +++V+ V+NPTPY+V+++ +E+   G        
Sbjct  148  FYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDGQ  207

Query  235  MLAPLSSDELRLKGTGAKS---VQYWAIDDFGGV  265
            M APL+   + LK + + S   ++Y  I+DFGG+
Sbjct  208  MAAPLTETSFTLKTATTTSSGKINYSFINDFGGI  241

192) fimB in NC_002927


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  154 bits (569),  Expect = 3e-39, Method: Compositional matrix adjust.
 Identities = 92/214 (43%), Positives = 148/214 (70%), Gaps = 12/214 (5%)

Query  61   ITGTRVIYNAGSPETTVKMSNEGQAPALMQAWIDDGNAEAKPDEVQVPFFLTPPLARVDP  120
            I+GTR++Y ++  +  V++ N G  P L+Q+W+D GN ++ P+ ++VPF  TPP++R+DP
Sbjct  31   ISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVSRIDP  90

Query  121  GKGQTLRIFFNGYPDGKTLPSDRESVFWLNVLEVPPKATPEE---GHGVLQLTIRSRLKL  177
             KGQT++I + G   ++TLPSDRESVFW+NVLEVPPKA  +E   ++  LQ ++R+R+KL
Sbjct  91   KKGQTIKIMYTG---SQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIKL  147

Query  178  FYRPKGLPGNPLTAAADLTFKRK---ANGVLEVHNPTPYYVNLQKLEVGENGAHGSKTPW  234
            FYRP+GL + +  A+A LT + K   +++V+ V+NPTPY+V+++ +E+   G        
Sbjct  148  FYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDGQ  207

Query  235  MLAPLSSDELRLKGTGAKS---VQYWAIDDFGGV  265
            M APL+   + LK + + S   ++Y  I+DFGG+
Sbjct  208  MAAPLTETSFTLKTATTTSSGKINYSFINDFGGI  241

193) fimB in NC_002928


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  154 bits (569),  Expect = 3e-39, Method: Compositional matrix adjust.
 Identities = 92/214 (43%), Positives = 148/214 (70%), Gaps = 12/214 (5%)

Query  61   ITGTRVIYNAGSPETTVKMSNEGQAPALMQAWIDDGNAEAKPDEVQVPFFLTPPLARVDP  120
            I+GTR++Y ++  +  V++ N G  P L+Q+W+D GN ++ P+ ++VPF  TPP++R+DP
Sbjct  31   ISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVSRIDP  90

Query  121  GKGQTLRIFFNGYPDGKTLPSDRESVFWLNVLEVPPKATPEE---GHGVLQLTIRSRLKL  177
             KGQT++I + G   ++TLPSDRESVFW+NVLEVPPKA  +E   ++  LQ ++R+R+KL
Sbjct  91   KKGQTIKIMYTG---SQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIKL  147

Query  178  FYRPKGLPGNPLTAAADLTFKRK---ANGVLEVHNPTPYYVNLQKLEVGENGAHGSKTPW  234
            FYRP+GL + +  A+A LT + K   +++V+ V+NPTPY+V+++ +E+   G        
Sbjct  148  FYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDGQ  207

Query  235  MLAPLSSDELRLKGTGAKS---VQYWAIDDFGGV  265
            M APL+   + LK + + S   ++Y  I+DFGG+
Sbjct  208  MAAPLTETSFTLKTATTTSSGKINYSFINDFGGI  241

194) fimB in NC_018828


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  154 bits (569),  Expect = 3e-39, Method: Compositional matrix adjust.
 Identities = 92/214 (43%), Positives = 148/214 (70%), Gaps = 12/214 (5%)

Query  61   ITGTRVIYNAGSPETTVKMSNEGQAPALMQAWIDDGNAEAKPDEVQVPFFLTPPLARVDP  120
            I+GTR++Y ++  +  V++ N G  P L+Q+W+D GN ++ P+ ++VPF  TPP++R+DP
Sbjct  31   ISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVSRIDP  90

Query  121  GKGQTLRIFFNGYPDGKTLPSDRESVFWLNVLEVPPKATPEE---GHGVLQLTIRSRLKL  177
             KGQT++I + G   ++TLPSDRESVFW+NVLEVPPKA  +E   ++  LQ ++R+R+KL
Sbjct  91   KKGQTIKIMYTG---SQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIKL  147

Query  178  FYRPKGLPGNPLTAAADLTFKRK---ANGVLEVHNPTPYYVNLQKLEVGENGAHGSKTPW  234
            FYRP+GL + +  A+A LT + K   +++V+ V+NPTPY+V+++ +E+   G        
Sbjct  148  FYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDGQ  207

Query  235  MLAPLSSDELRLKGTGAKS---VQYWAIDDFGGV  265
            M APL+   + LK + + S   ++Y  I+DFGG+
Sbjct  208  MAAPLTETSFTLKTATTTSSGKINYSFINDFGGI  241

195) BB2000_2233 in NC_022000


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  154 bits (567),  Expect = 3e-39, Method: Compositional matrix adjust.
 Identities = 94/228 (42%), Positives = 155/228 (68%), Gaps = 10/228 (4%)

Query  4    ASVVIMGTRVVYPATQKSINVQLNNNDESPALIQSWLDTGNAAAAPDSIHVPFIITPPIF  63
            A +VI GTR+VY ++QK +NV+L+N++  P L+Q+WLDTGN  + P++I VPF  TPP+ 
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  64   RMEPKSGQTIRIVYTG-ESLPQDRESLFYLNVLDIPAKPKLeensensegnnnYLQLAVR  122
            R++PK GQTI+I+YTG ++LP DRES+F +NVL++P+K++ +ENS   +     LQ A R
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNT----LQSAFR  142

Query  123  SRIKFFFRPDNLNVTPDDAYQKVTW---HQEGALRIKAINPTPYYITYNKISVGQDKQLT  179
            +RIK+F+RP+ L   +++A  K+TW   H++G   +   NPTPY++++N I +    +  
Sbjct  143  TRIKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKY  202

Query  180  PVEQSGMIAPFSSKIFSLK-EKPILTNKVTWVVVNDYGGYQQGESTLE  226
             V+ + M AP++   F+LK      + K+    +ND+GG  ++ ++L+
Sbjct  203  IVD-GQMAAPLTETSFTLKTATTTSSGKINYSFINDFGGIINATASLQ  249

196) YE2694 in NC_008800


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  154 bits (567),  Expect = 5e-39, Method: Compositional matrix adjust.
 Identities = 97/239 (41%), Positives = 165/239 (70%), Gaps = 7/239 (2%)

Query  22   TIILVLSLIVGNIPTYAAMTISGTRVIFPAAQKEVNVRTNNKGTEPALVQVWVDDGSSNA  81
            T+I + + +++N+ + A + ISGTR+++ +AQK+VNVR +NKG+ P LVQ W+D G+ N+
Sbjct  12   TVITLTGTLLSNV-AWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNT  70

Query  82   KINNvtvpfivtppvfrvESGKGQSVRMIYNG-MALPQDKESVFWFNMLEIPA---VQKD  137
                + VPF  TPPV R+++ KGQ+++++Y G  +LP D+ESVFWFN+LE+P+    + +
Sbjct  71   EPGAIKVPFNATPPVSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNEN  130

Query  138  SADKNKLELAFRTRIKIFYRPTALNSSSAEQAEKLQWELVNDSQKGQGVKVTNPSPYYFS  197
            SA +N L+ AFRTRIK+FYRP +L   ++E + KL W + ++  K+  V V NP+PY+ S
Sbjct  131  SAAQNTLQSAFRTRIKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKS-VVTVNNPTPYFVS  189

Query  198  FDSGSVTAGGKKVELKTDMLAPLSTSVF-YPNSKVSGISTMSYKLLNDYGAAIDGNISF  255
            F+S  + + GKK  +  +M APL+ + F    +  ++ + ++Y ++ND+G+ I++  S+
Sbjct  190  FNSIELESTGKKYIVDGQMAAPLTETSFTLKTATTTSSGKINYSFINDFGGIINATASL  248

197) YE105_C1593 in NC_015224


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  153 bits (566),  Expect = 4e-39, Method: Compositional matrix adjust.
 Identities = 97/239 (41%), Positives = 165/239 (70%), Gaps = 7/239 (2%)

Query  5    TIILVLSLIVGNIPTYAAMTISGTRVIFPAAQKEVNVRTNNKGTEPALVQVWVDDGSSNA  64
            T+I + + +++N+ + A + ISGTR+++ +AQK+VNVR +NKG+ P LVQ W+D G+ N+
Sbjct  12   TVITLTGTLLSNV-AWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNT  70

Query  65   KINNvtvpfivtppvfrvESGKGQSVRMIYNG-MALPQDKESVFWFNMLEIPA---VQKD  120
                + VPF  TPPV R+++ KGQ+++++Y G  +LP D+ESVFWFN+LE+P+    + +
Sbjct  71   EPGAIKVPFNATPPVSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNEN  130

Query  121  SADKNKLELAFRTRIKIFYRPTALNSSSAEQAEKLQWELVNDSQKGQGVKVTNPSPYYFS  180
            SA +N L+ AFRTRIK+FYRP +L   ++E + KL W + ++  K+  V V NP+PY+ S
Sbjct  131  SAAQNTLQSAFRTRIKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKS-VVTVNNPTPYFVS  189

Query  181  FDSGSVTAGGKKVELKTDMLAPLSTSVF-YPNSKVSGISTMSYKLLNDYGAAIDGNISF  238
            F+S  + + GKK  +  +M APL+ + F    +  ++ + ++Y ++ND+G+ I++  S+
Sbjct  190  FNSIELESTGKKYIVDGQMAAPLTETSFTLKTATTTSSGKINYSFINDFGGIINATASL  248

198) Y11_15731 in NC_017564


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  153 bits (566),  Expect = 4e-39, Method: Compositional matrix adjust.
 Identities = 97/239 (41%), Positives = 165/239 (70%), Gaps = 7/239 (2%)

Query  5    TIILVLSLIVGNIPTYAAMTISGTRVIFPAAQKEVNVRTNNKGTEPALVQVWVDDGSSNA  64
            T+I + + +++N+ + A + ISGTR+++ +AQK+VNVR +NKG+ P LVQ W+D G+ N+
Sbjct  12   TVITLTGTLLSNV-AWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNT  70

Query  65   KINNvtvpfivtppvfrvESGKGQSVRMIYNG-MALPQDKESVFWFNMLEIPA---VQKD  120
                + VPF  TPPV R+++ KGQ+++++Y G  +LP D+ESVFWFN+LE+P+    + +
Sbjct  71   EPGAIKVPFNATPPVSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNEN  130

Query  121  SADKNKLELAFRTRIKIFYRPTALNSSSAEQAEKLQWELVNDSQKGQGVKVTNPSPYYFS  180
            SA +N L+ AFRTRIK+FYRP +L   ++E + KL W + ++  K+  V V NP+PY+ S
Sbjct  131  SAAQNTLQSAFRTRIKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKS-VVTVNNPTPYFVS  189

Query  181  FDSGSVTAGGKKVELKTDMLAPLSTSVF-YPNSKVSGISTMSYKLLNDYGAAIDGNISF  238
            F+S  + + GKK  +  +M APL+ + F    +  ++ + ++Y ++ND+G+ I++  S+
Sbjct  190  FNSIELESTGKKYIVDGQMAAPLTETSFTLKTATTTSSGKINYSFINDFGGIINATASL  248

199) fhaD in NC_010645


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  153 bits (564),  Expect = 8e-39, Method: Compositional matrix adjust.
 Identities = 89/220 (41%), Positives = 157/220 (72%), Gaps = 15/220 (6%)

Query  46   ASLVIEGTRVVYREGAPEVVVKMTNDGSVPSLMQAWLDDGRADATPDQMEVPFFLTPPLA  105
            A +VI GTR+VYR +  +V V++ N GS P L+Q+WLD G  ++ P+ + VPF  TPP++
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  106  RIEPGKGQTLRIFHTAGGEALPKDRESIFWLNVLDVPPKPQGDQDAGA--ILQISVRSRL  163
            RI+P KGQT++I  T G+++LP DRES+FW+NVL+VPPK++ +++++A   LQ + R+R+
Sbjct  87   RIDPKKGQTIKIMYT-GSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRI  145

Query  164  KFFYRPKGLSGTADAAPADLTFKL---AGAGKLEVSNPTPYYVNLSELSFGGSKEAPSQR  220
            K+FYRP+GL++ A+ APA LT ++    G + + V+NPTPY+V+++ + +    E+ +++
Sbjct  146  KLFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIEL----ESTGKK  201

Query  221  F--PALMIAPFSSAKLDIGKSAPT---QMRYAAISDLGAI  255
            +   + M AP++ + + +  ++ T   ++ Y+ I+D+G+I
Sbjct  202  YIVDGQMAAPLTETSFTLKTATTTSSGKINYSFINDFGGI  241

200) BRPE64_ACDS06680 in NC_021287


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  152 bits (562),  Expect = 8e-39, Method: Compositional matrix adjust.
 Identities = 87/215 (41%), Positives = 153/215 (72%), Gaps = 7/215 (3%)

Query  1    MYNATDNEVTLKLSNVGKAPALTQMWLDKGDPKADPSKLKLPFVLTPPIARIDPQKAQTI  60
            +Y +++++V ++L N G  P L Q WLD G+ +++P+ +K+PF  TPP++RIDP+K+QTI
Sbjct  37   VYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVSRIDPKKGQTI  96

Query  61   RISYTG-EPMPKDRESLLWFNMLEVPPRPTADQ--AGPNYVQLAFRSRLKFFYRPEGLQG  117
            +I YTG + +P DRES++WFN+LEVPP++  ++  A+ N +Q AFR+R+K+FYRP+GL +
Sbjct  97   KIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIKLFYRPQGLGD  156

Query  118  RADDAPASLTWRKSTQNGKPSLVISNPTPYHVTIIDAQLGEGANAPKFNEVG-MVEPRGQ  176
             A++APA LTWR   ++GK+ + ++NPTPY V++   +L   ++  K+   G M  P  +
Sbjct  157  LAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGK--KYIVDGQMAAPLTE  214

Query  177  LELP-vnvasvaaakvsFTTINDYGGPVKHEAPIQ  210
              +     ++ +++K++++ IND+GG ++  A++Q
Sbjct  215  TSFTLKTATTTSSGKINYSFINDFGGIINATASLQ  249

201) ecpD in NC_005085


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  149 bits (549),  Expect = 1e-37, Method: Compositional matrix adjust.
 Identities = 88/215 (41%), Positives = 139/215 (65%), Gaps = 7/215 (3%)

Query  36   YKAEDREVTVKVNNPGKEPSLVQVWADKGNEKSVPDTADAPFLIMPPIFRVDPAKGQTLR  95
            Y++ +++V V+++N G  P LVQ W D GN+++ P++   PF   PP+ R+DP KGQT++
Sbjct  38   YRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVSRIDPKKGQTIK  97

Query  96   LTFTGAD-LPKERESVFWLNVLDVPPLP--KAASEQRNFMQVAFRSRIKLFYRPVGLPGT  152
            + +TG++ LP +RESVFW+NVL+VPP +  +  S  +N +Q AFR+RIKLFYRP GL + 
Sbjct  98   IMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIKLFYRPQGLGDL  157

Query  153  PDEAADKLSWSLLPQAGGKGYMLRASNQAAYHVSLNRAVLLVGKHEYETDGGMVPPGGSH  212
            ++EA+ KL+W  + +  GK+ ++  +N ++Y VS+N   L      Y  DG M +P    
Sbjct  158  AGEAPAKLTWR-MKHEQGKS-VVTVNNPTPYFVSFNSIELESTGKKYIVDGQMAAPLTET  215

Query  213  DFALKDLKLKPEGALKLNYESINDYGAPVAHSISL  247
             F+LK     + G  K+NY  IND+G+ +  + SL
Sbjct  216  SFTLKTATTTSSG--KINYSFINDFGGIINATASL  248

202) Shewmr4_2236 in NC_008321


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  146 bits (537),  Expect = 8e-37, Method: Compositional matrix adjust.
 Identities = 85/212 (41%), Positives = 146/212 (69%), Gaps = 15/212 (7%)

Query  26   LDNTRIIYRSDKEEVSLKLTNKGSEPFLVQSWIDNGELNLDPSNIKVPFVISPPINKINA  85
            +  TRI+YR+ + +V+++L NKGS P+LVQ+W+D G+ N +P+ IKVPF  +PP+++I++
Sbjct  31   ISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVSRIDP  90

Query  86   GEGQHLRIFYTG-ETLPDNKESIFWLNVLSVPPK-----NNSNANKLQLAFKTKIKLFFR  139
              GQ ++I YTG +TLP ++ES+FW+NVL VPPK     N++  N LQ AF+T+IKLF+R
Sbjct  91   KKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIKLFYR  150

Query  140  PTSLDGSTSSAVEKIKLS-KLENG---MEINNPTPFFITILSISAVESGD---IEKKLIE  192
            P +L++ ++ A  K+    K E+G   + +NNPTP+F+++ SI    +G    ++ ++  
Sbjct  151  PQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTGKKYIVDGQMAA  210

Query  193  NIMISPFEVLTVSSEYNSSLVHNISFINDYGA  224
             +  ++F + T ++  ++ +  N SFIND+G+
Sbjct  211  PLTETSFTLKTATTTSSGKI--NYSFINDFGG  240

203) ACIAD0388 in NC_005966


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  144 bits (530),  Expect = 3e-36, Method: Compositional matrix adjust.
 Identities = 97/236 (42%), Positives = 153/236 (65%), Gaps = 17/236 (7%)

Query  5    SFIISIL---LLSQYTNAGVSIDGTRIIFPSNAKSVSVQLRNGFATPALVQTWIDQGDMS  61
            +F +  L   LLS+ + A++ I GTRI++ +  K V+V+L N  + P LVQTW+D G+ +
Sbjct  10   AFTVITLTGTLLSNVAWADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDN  69

Query  62   SIPAADQIPFVLTPPLSRVEAKKGQIIRIIPTGSPALPQDRESLYWFNMLDIPPEDSANK  121
            + P+A ++PF  TPP+SR+++KKGQ I+I+ TGS +LP DRES++WFN+L++PP  + N 
Sbjct  70   TEPGAIKVPFNATPPVSRIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNE  129

Query  122  D---KNILTFNVRSRIKLFYRPTGLKMSSDKAFASVGY--SYNNGTQAVTLNNPTPYFVT  176
            +   +N L    R+RIKLFYRP GL   ++ A A +      ++G   VT+NNPTPYFV+
Sbjct  130  NSAAQNTLQSAFRTRIKLFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVS  189

Query  177  VTKVDFKNQSQTASYNADVVMLAPFSQQILNKFQLK----FKPDQMNYTIINDLGG  228
               +++  +S    Y  D  M AP+++     F LK      ++++NY++IND+GG
Sbjct  190  FNSIEL--ESTGKKYIVDGQMAAPLTE---TSFTLKTATTTSSGKINYSFINDFGG  240

204) PFL_3923 in NC_004129


> AY144490|7|G6|28882468|AAO49832.1|Salmonella_enterica_subsp._enterica_serovar_Dublin_9805277|-|6894..7643|ecpD1|-|pilin 
chaperone 
ecpD1
Length=249

 Score =  136 bits (499),  Expect = 8e-34, Method: Compositional matrix adjust.
 Identities = 87/215 (41%), Positives = 139/215 (65%), Gaps = 13/215 (6%)

Query  24   AGISLSSTRLIFDGQHKEAGITVRNSGE-DVLIQSWIDTDSSETAA----VPFAVTPPLV  78
            A+I +S+TR+++ G +K+  + + N G   +L+Q+W+DT++ +T +    VPF  TPP+ 
Sbjct  27   ADIVISGTRIVYRGAQKDVNVRLENKGSRPLLVQTWLDTGNDNTEPGAIKVPFNATPPVS  86

Query  79   RVSGDEQQILRVIYEGA-GMPTDRESVVWLNVQEIP-KAAKSEN-----TLQLAVRQRIK  131
            R+     Q ++++Y G+  +P+DRESV W+NV E+P KA K+EN     TLQ A R RIK
Sbjct  87   RIDPKKGQTIKIMYTGSQTLPSDRESVFWFNVLEVPPKANKNENSAAQNTLQSAFRTRIK  146

Query  132  VFFRPAGLKNNAYLAPSELTWRLTEQAGKSLLVVNNPGRYHVSIADITLQSGTISEHPFD  191
            +F+RP GL + A  AP+ LTWR+ ++ GKS++ VNNP  Y VS+  I L+S        D
Sbjct  147  LFYRPQGLGDLAGEAPAKLTWRMKHEQGKSVVTVNNPTPYFVSFNSIELESTG-KKYIVD  205

Query  192  SMMIAPGEQKSFPLKQLHNANTAHLSFSSINDYGA  226
            + M AP  + SF LK    ++++ +++S IND+G+
Sbjct  206  GQMAAPLTETSFTLKTATTTSSGKINYSFINDFGG  240