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Homologs of unnamed gene of AJ303141

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) ECO103_3558
( YP_003223423.1 )

IS608 transposase

NC_013353
(Escherichia coli 12009)

2e-105

2) ECO55CA74_17335
( YP_006160585.1 )

putative transposase

NC_017656
(Escherichia coli RM12579)

4e-105

3) ECSP_3949
( YP_003079766.1 )

transposase

NC_013008
(Escherichia coli TW14359)

1e-104

4) Z4324
( NP_289549.1 )

transposase

NC_002655
(Escherichia coli EDL933)

1e-104

5) CP0119
( NP_858252.2 )

transposase

NC_004851
(Shigella flexneri 301)

5e-43

• Sequence Alignments

1) ECO103_3558 in NC_013353


> AJ303141|7|G6|57434392|CAI43809.1|Escherichia_coli_RW1374|+|7298..8038|-|-|putative 
transposase
Length=246

 Score =  374 bits (1407),  Expect = 2e-105, Method: Compositional matrix adjust.
 Identities = 245/246 (99%), Positives = 246/246 (100%), Gaps = 0/246 (0%)

Query  1    MAERLGEIQKQVITVCDREADIWHYLHYKVSRGKPHAECDAKRRAGSPPGPDAHqlqrsq  60
            MAERLGEIQKQVITVCDREADIWHYLHYKVSRGKPHAECDAKRRAGSPPGPDAHQLQRSQ
Sbjct  1    MAERLGEIQKQVITVCDREADIWHYLHYKVSRGKPHAECDAKRRAGSPPGPDAHQLQRSQ  60

Query  61   hkksrqqrPGALAHVCLLRGAGEDGACWYPLTSEKVASAADARRIVSHYEQRWLIEEYHK  120
            HKKSRQQRPGALAHVCLLRGAGEDGACWYPLTSEKVASAADARRIVSHYEQRWLIEEYHK
Sbjct  61   HKKSRQQRPGALAHVCLLRGAGEDGACWYPLTSEKVASAADARRIVSHYEQRWLIEEYHK  120

Query  121  AWKSGGTCVESLRMQTRDNLERMVVIAVRVLGLRQGGISEETQNDSCEKILTPTEWKLLW  180
            AWKSGGTCVESLRMQTRDNLERMVVIAVRVLGLRQG+ISEETQNDSCEKILTPTEWKLLW
Sbjct  121  AWKSGGTCVESLRMQTRDNLERMVVIAVRVLGLRQGSISEETQNDSCEKILTPTEWKLLW  180

Query  181  VKLEGKQLPAQTPTLKWACLKLAKLGRWHDSKRTSSPGWVVMWDGWFRHQDMAEGYLVMK  240
            VKLEGKQLPAQTPTLKWACLKLAKLGRWHDSKRTSSPGWVVMWDGWFRHQDMAEGYLVMK
Sbjct  181  VKLEGKQLPAQTPTLKWACLKLAKLGRWHDSKRTSSPGWVVMWDGWFRHQDMAEGYLVMK  240

Query  241  SLDQEI  246
            SLDQEI
Sbjct  241  SLDQEI  246

2) ECO55CA74_17335 in NC_017656


> AJ303141|7|G6|57434392|CAI43809.1|Escherichia_coli_RW1374|+|7298..8038|-|-|putative 
transposase
Length=246

 Score =  373 bits (1403),  Expect = 4e-105, Method: Compositional matrix adjust.
 Identities = 244/246 (99%), Positives = 245/246 (99%), Gaps = 0/246 (0%)

Query  51   MAERLGEIQKQVITVCDREADIWHYLHYKVSRGKPHAECDAKRRAGSPPGPDAHqlqrsq  110
            MAERLGEIQKQVITVCDREADIWHYLHYKVSRGKPHAECDAKRRAGSPPGPDAHQLQRSQ
Sbjct  1    MAERLGEIQKQVITVCDREADIWHYLHYKVSRGKPHAECDAKRRAGSPPGPDAHQLQRSQ  60

Query  111  hkksrqqrPGALAHVCLLRGAGEDGACWYPLTSEKVASAADARRIVSHYEQRWLIEEYHK  170
            HKKSRQQRPGALAHVCLLRGAGEDGACWYPLTSEKVASAADARRIVSHYEQRWLIEEYHK
Sbjct  61   HKKSRQQRPGALAHVCLLRGAGEDGACWYPLTSEKVASAADARRIVSHYEQRWLIEEYHK  120

Query  171  AWKSGGTCVESLRMQTRDNLERMVVIAVRVLGLRQGGISEETQNDSCEKILTPTEWKLLW  230
            AWKSGGTCVESLRMQTRDNLERMVVIAVRVLGLRQG+ISEETQNDSCEKILTPTEWKLLW
Sbjct  121  AWKSGGTCVESLRMQTRDNLERMVVIAVRVLGLRQGSISEETQNDSCEKILTPTEWKLLW  180

Query  231  VKLEGKQLPAQTPPLKWACLKLAKLGRWHDSKRTSSPGWVVMWDGWFRHQDMAEGYLVMK  290
            VKLEGKQLPAQTP LKWACLKLAKLGRWHDSKRTSSPGWVVMWDGWFRHQDMAEGYLVMK
Sbjct  181  VKLEGKQLPAQTPTLKWACLKLAKLGRWHDSKRTSSPGWVVMWDGWFRHQDMAEGYLVMK  240

Query  291  SLDQEI  296
            SLDQEI
Sbjct  241  SLDQEI  246

3) ECSP_3949 in NC_013008


> AJ303141|7|G6|57434392|CAI43809.1|Escherichia_coli_RW1374|+|7298..8038|-|-|putative 
transposase
Length=246

 Score =  372 bits (1397),  Expect = 1e-104, Method: Compositional matrix adjust.
 Identities = 244/246 (99%), Positives = 245/246 (99%), Gaps = 0/246 (0%)

Query  51   MAERLREIQKQVITVCDREADIWHYLHYKVSRGKPHAECDAKRRAGSPPGPDAHqlqrsq  110
            MAERL EIQKQVITVCDREADIWHYLHYKVSRGKPHAECDAKRRAGSPPGPDAHQLQRSQ
Sbjct  1    MAERLGEIQKQVITVCDREADIWHYLHYKVSRGKPHAECDAKRRAGSPPGPDAHQLQRSQ  60

Query  111  hkksrqqrPGALAHVCLLRGAGEDGACWYPLTSEKVASAADARRIVSHYEQRWLIEEYHK  170
            HKKSRQQRPGALAHVCLLRGAGEDGACWYPLTSEKVASAADARRIVSHYEQRWLIEEYHK
Sbjct  61   HKKSRQQRPGALAHVCLLRGAGEDGACWYPLTSEKVASAADARRIVSHYEQRWLIEEYHK  120

Query  171  AWKSGGTCVESLRMQTRDNLERMVVIAVRVLGLRQGGISEETQNDSCEKILTPTEWKLLW  230
            AWKSGGTCVESLRMQTRDNLERMVVIAVRVLGLRQG+ISEETQNDSCEKILTPTEWKLLW
Sbjct  121  AWKSGGTCVESLRMQTRDNLERMVVIAVRVLGLRQGSISEETQNDSCEKILTPTEWKLLW  180

Query  231  VKLEGKQLPAQTPTLKWACLKLAKLGRWHDSKRTSSPGWVVMWDGWFRHQDMAEGYLVMK  290
            VKLEGKQLPAQTPTLKWACLKLAKLGRWHDSKRTSSPGWVVMWDGWFRHQDMAEGYLVMK
Sbjct  181  VKLEGKQLPAQTPTLKWACLKLAKLGRWHDSKRTSSPGWVVMWDGWFRHQDMAEGYLVMK  240

Query  291  SLDQEI  296
            SLDQEI
Sbjct  241  SLDQEI  246

4) Z4324 in NC_002655


> AJ303141|7|G6|57434392|CAI43809.1|Escherichia_coli_RW1374|+|7298..8038|-|-|putative 
transposase
Length=246

 Score =  371 bits (1396),  Expect = 1e-104, Method: Compositional matrix adjust.
 Identities = 244/246 (99%), Positives = 245/246 (99%), Gaps = 0/246 (0%)

Query  1    MAERLREIQKQVITVCDREADIWHYLHYKVSRGKPHAECDAKRRAGSPPGPDAHqlqrsq  60
            MAERL EIQKQVITVCDREADIWHYLHYKVSRGKPHAECDAKRRAGSPPGPDAHQLQRSQ
Sbjct  1    MAERLGEIQKQVITVCDREADIWHYLHYKVSRGKPHAECDAKRRAGSPPGPDAHQLQRSQ  60

Query  61   hkksrqqrPGALAHVCLLRGAGEDGACWYPLTSEKVASAADARRIVSHYEQRWLIEEYHK  120
            HKKSRQQRPGALAHVCLLRGAGEDGACWYPLTSEKVASAADARRIVSHYEQRWLIEEYHK
Sbjct  61   HKKSRQQRPGALAHVCLLRGAGEDGACWYPLTSEKVASAADARRIVSHYEQRWLIEEYHK  120

Query  121  AWKSGGTCVESLRMQTRDNLERMVVIAVRVLGLRQGGISEETQNDSCEKILTPTEWKLLW  180
            AWKSGGTCVESLRMQTRDNLERMVVIAVRVLGLRQG+ISEETQNDSCEKILTPTEWKLLW
Sbjct  121  AWKSGGTCVESLRMQTRDNLERMVVIAVRVLGLRQGSISEETQNDSCEKILTPTEWKLLW  180

Query  181  VKLEGKQLPAQTPTLKWACLKLAKLGRWHDSKRTSSPGWVVMWDGWFRHQDMAEGYLVMK  240
            VKLEGKQLPAQTPTLKWACLKLAKLGRWHDSKRTSSPGWVVMWDGWFRHQDMAEGYLVMK
Sbjct  181  VKLEGKQLPAQTPTLKWACLKLAKLGRWHDSKRTSSPGWVVMWDGWFRHQDMAEGYLVMK  240

Query  241  SLDQEI  246
            SLDQEI
Sbjct  241  SLDQEI  246

5) PBPRB1485 in NC_006371


> AJ303141|7|G6|57434392|CAI43809.1|Escherichia_coli_RW1374|+|7298..8038|-|-|putative 
transposase
Length=246

 Score =  186 bits (689),  Expect = 2e-48, Method: Compositional matrix adjust.
 Identities = 118/274 (44%), Positives = 168/274 (62%), Gaps = 38/274 (13%)

Query  90   MASRLGETMQQVISVCDREADIYEYLTYKTQENQRFVVRSMQSRCIEESDNKLYAFSDQL  149
            MA RLGE  +QVI+VCDREADI +YL YK    +       + R    ++      ++QL
Sbjct  1    MAERLGEIQKQVITVCDREADIWHYLHYKVSRGKPHAECDAKRRAGSPPGPD----AHQL  56

Query  150  QPAGNRKIYIPQKGGRKAREVILDIRFSTITLKVPANKKGKSIPLYYVGCVEQGAGDNGL  209
            Q + ++K                             +++ ++ +L  V C+ +GAG++G 
Sbjct  57   QRSQHKK-----------------------------SRQQRPGALAHV-CLLRGAGEDGA  86

Query  210  SWHLMTSEPVTNREEALKIVQYYEQRWLIEDYHKAWKSGGTQVESLRMQSYTNIERMATI  269
             W  +TSE V++  +A +IV  YEQRWLIE+YHKAWKSGGT VESLRMQ+  N+ERM  I
Sbjct  87   CWYPLTSEKVASAADARRIVSHYEQRWLIEEYHKAWKSGGTCVESLRMQTRDNLERMVVI  146

Query  270  LAFLATRILQLKFMGQNIKADEESCESILSPIGWKLLWLKRENKPLPNEVPSIRWAYLAL  329
                A R+L L+  + +  ++++SCE IL+P  WKLLW+K E K LP + P+++WA L L
Sbjct  147  ----AVRVLGLRQGSISEETQNDSCEKILTPTEWKLLWVKLEGKQLPAQTPTLKWACLKL  202

Query  330  AKLGGWNDSKRTGRAGWPVLWDGWFKLQTIIEGY  363
            AKLG W+DSKRT+ +GW V+WDGWF+ Q + EGY
Sbjct  203  AKLGRWHDSKRTSSPGWVVMWDGWFRHQDMAEGY  236

6) CP0119 in NC_004851


> AJ303141|7|G6|57434392|CAI43809.1|Escherichia_coli_RW1374|+|7298..8038|-|-|putative 
transposase
Length=246

 Score =  167 bits (616),  Expect = 5e-43, Method: Compositional matrix adjust.
 Identities = 143/233 (62%), Positives = 163/233 (70%), Gaps = 38/233 (16%)

Query  1    MAEWLGEIQKRVITVCDREADIWHYLYYKVSHGQRGACCTESPAGRGTRQALRTAGSPGN  60
            MAE+LGEIQK+VITVCDREADIWHYL YKVS+G                           
Sbjct  1    MAERLGEIQKQVITVCDREADIWHYLHYKVSRG---------------------------  33

Query  61   RRKPHAECDAKRRAGSPSGPDVHqlqrsqhkksrqqrPGAPAHVCLLPGAGRG---RCLL  117
              KPHAECDAKRRAGSP+GPD HQLQRSQHKKSRQQRPGA AHVCLL GAG +   +  L
Sbjct  34   --KPHAECDAKRRAGSPPGPDAHQLQRSQHKKSRQQRPGALAHVCLLRGAGEDGACWYPL  91

Query  118  ASADVRKSGECRRCTTYCQPLRATLADRGIPQGVEKWWYMESLRMQTRDNLERMVVILAF  177
            +S  V  +++ RR  +  +  +     +   ++      +ESLRMQTRDNLERMVVI   
Sbjct  92   TSEKVASAADARRIVSHYEQRWLIEEYHKAWKSGGT--CVESLRMQTRDNLERMVVI---  146

Query  178  IAVRVLGLRQGGVSEETQNDSCEKILTPTEWKLLWVKLEGKPLPVQAPTLKWA  230
             AVRVLGLRQG++SEETQNDSCEKILTPTEWKLLWVKLEGK LP Q+PTLKWA
Sbjct  147  -AVRVLGLRQGSISEETQNDSCEKILTPTEWKLLWVKLEGKQLPAQTPTLKWA  198

7) VIBHAR_05272 in NC_009784


> AJ303141|7|G6|57434392|CAI43809.1|Escherichia_coli_RW1374|+|7298..8038|-|-|putative 
transposase
Length=246

 Score =  159 bits (588),  Expect = 8e-41, Method: Compositional matrix adjust.
 Identities = 87/173 (51%), Positives = 122/173 (71%), Gaps = 4/173 (2%)

Query  71   CLEQGTSKDKLAWHLLTSEPINNVDDAMRIIGYYERRWLIEDFHKVWKSEGTDVESLRLQ  130
            CL +G++ D   W  LTSE + +  DA RI++ YE+RWLIE++HK WKS GT VESLR+Q
Sbjct  76   CLLRGAGEDGACWYPLTSEKVASAADARRIVSHYEQRWLIEEYHKAWKSGGTCVESLRMQ  135

Query  131  SKDNLERLSVIYAFVATRLLALRFMKEVDELTKESCEKVLGQKAWKLLWLKLESKTLPKE  190
            ++DNLER+ VI    A R+L+LR     +E  ++SCEK+L    WKLLW+KLE+K LP +
Sbjct  136  TRDNLERMVVI----AVRVLGLRQGSISEETQNDSCEKILTPTEWKLLWVKLEGKQLPAQ  191

Query  191  VPDMGWAYKNLAKLGGWKDTKRTGRASIKVLWEGWFKLQTILEGYELAMSLDH  243
             P + WA  +LAKLG W D+KRT+ ++  V+W+GWF+ Q + EGY +  SLD+
Sbjct  192  TPTLKWACLKLAKLGRWHDSKRTSSPGWVVMWDGWFRHQDMAEGYLVMKSLDQ  244

8) M892_01950 in NC_022269


> AJ303141|7|G6|57434392|CAI43809.1|Escherichia_coli_RW1374|+|7298..8038|-|-|putative 
transposase
Length=246

 Score =  159 bits (587),  Expect = 9e-41, Method: Compositional matrix adjust.
 Identities = 87/173 (51%), Positives = 122/173 (71%), Gaps = 4/173 (2%)

Query  71   CLEQGTSKDKLAWHLLTSEPINNVDDAMRIIGYYERRWLIEDFHKVWKSEGTDVESLRLQ  130
            CL +G++ D   W  LTSE + +  DA RI++ YE+RWLIE++HK WKS GT VESLR+Q
Sbjct  76   CLLRGAGEDGACWYPLTSEKVASAADARRIVSHYEQRWLIEEYHKAWKSGGTCVESLRMQ  135

Query  131  SKDNLERLSVIYAFVATRLLALRFMKEVDELTKESCEKVLGQKAWKLLWLKLESKTLPKE  190
            ++DNLER+ VI    A R+L+LR     +E  ++SCEK+L    WKLLW+KLE+K LP +
Sbjct  136  TRDNLERMVVI----AVRVLGLRQGSISEETQNDSCEKILTPTEWKLLWVKLEGKQLPAQ  191

Query  191  VPDMGWAYKNLAKLGGWKDTKRTGRASIKVLWEGWFKLQTILEGYELAMSLDH  243
             P + WA  +LAKLG W D+KRT+ ++  V+W+GWF+ Q + EGY +  SLD+
Sbjct  192  TPTLKWACLKLAKLGRWHDSKRTSSPGWVVMWDGWFRHQDMAEGYLVMKSLDQ  244

9) VIBHAR_00457 in NC_009783


> AJ303141|7|G6|57434392|CAI43809.1|Escherichia_coli_RW1374|+|7298..8038|-|-|putative 
transposase
Length=246

 Score =  155 bits (571),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 90/193 (47%), Positives = 129/193 (67%), Gaps = 5/193 (2%)

Query  3    LKAPANKKEHAGIPVYYV-GCLEQGTSKDKLAWHLLTSEPINNVEDAMRIIGYYERRWLI  61
            L+ + +KK +   P      CL +G++ D   W  LTSE + +  DA RI++ YE+RWLI
Sbjct  56   LQRSQHKKSRQQRPGALAHVCLLRGAGEDGACWYPLTSEKVASAADARRIVSHYEQRWLI  115

Query  62   EDFHKVWKSEGTDVESLRLQSKDNLERLSVIYAFVATRLLALRFMKEVDELTKESCEKVL  121
            E++HK WKS GT VESLR+Q++DNLER+ VI    A R+L+LR     +E  ++SCEK+L
Sbjct  116  EEYHKAWKSGGTCVESLRMQTRDNLERMVVI----AVRVLGLRQGSISEETQNDSCEKIL  171

Query  122  GQKAWKLLWLKLESKTLPKEVPDMGWAYKNLAKLGGWKDTKGTGRASIKVLWEGWFKLQT  181
                WKLLW+KLE+K LP + P + WA  +LAKLG W D+K T+ ++  V+W+GWF+ Q 
Sbjct  172  TPTEWKLLWVKLEGKQLPAQTPTLKWACLKLAKLGRWHDSKRTSSPGWVVMWDGWFRHQD  231

Query  182  ILEGYELAMSLDH  194
            + EGY +  SLD+
Sbjct  232  MAEGYLVMKSLDQ  244

10) VIBHAR_00497 in NC_009783


> AJ303141|7|G6|57434392|CAI43809.1|Escherichia_coli_RW1374|+|7298..8038|-|-|putative 
transposase
Length=246

 Score =  155 bits (571),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 90/193 (47%), Positives = 129/193 (67%), Gaps = 5/193 (2%)

Query  3    LKAPANKKEHAGIPVYYV-GCLEQGTSKDKLAWHLLTSEPINNVEDAMRIIGYYERRWLI  61
            L+ + +KK +   P      CL +G++ D   W  LTSE + +  DA RI++ YE+RWLI
Sbjct  56   LQRSQHKKSRQQRPGALAHVCLLRGAGEDGACWYPLTSEKVASAADARRIVSHYEQRWLI  115

Query  62   EDFHKVWKSEGTDVESLRLQSKDNLERLSVIYAFVATRLLALRFMKEVDELTKESCEKVL  121
            E++HK WKS GT VESLR+Q++DNLER+ VI    A R+L+LR     +E  ++SCEK+L
Sbjct  116  EEYHKAWKSGGTCVESLRMQTRDNLERMVVI----AVRVLGLRQGSISEETQNDSCEKIL  171

Query  122  GQKAWKLLWLKLESKTLPKEVPDMGWAYKNLAKLGGWKDTKGTGRASIKVLWEGWFKLQT  181
                WKLLW+KLE+K LP + P + WA  +LAKLG W D+K T+ ++  V+W+GWF+ Q 
Sbjct  172  TPTEWKLLWVKLEGKQLPAQTPTLKWACLKLAKLGRWHDSKRTSSPGWVVMWDGWFRHQD  231

Query  182  ILEGYELAMSLDH  194
            + EGY +  SLD+
Sbjct  232  MAEGYLVMKSLDQ  244