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PAthogenisity Island DataBase (PAI DB)

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Homologs of unnamed gene of AF200692

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) O3M_22935
( YP_006772198.1 )

protein encoded within IS

NC_018650
(Escherichia coli 2009EL-2050)

1e-49

100

2) O3O_02335
( YP_006786387.1 )

protein encoded within IS

NC_018661
(Escherichia coli 2009EL-2071)

1e-49

100

3) O3K_23020
( YP_006781258.1 )

protein encoded within IS

NC_018658
(Escherichia coli 2011C-3493)

1e-49

100

4) SFxv_3252
( YP_005728590.1 )

putative transposase

NC_017328
(Shigella flexneri 2002017)

1e-49

100

5) SF2970
( NP_708744.1 )

hypothetical protein

NC_004337
(Shigella flexneri 301)

8e-49

100

6) SBO_4151
( YP_410406.1 )

protein encoded within IS

NC_007613
(Shigella boydii Sb227)

2e-48

7) EC042_4591
( YP_006098862.1 )

transposase

NC_017626
(Escherichia coli 042)

2e-48

8) O3O_21135
( YP_006782692.1 )

transposase for IS66

NC_018661
(Escherichia coli 2009EL-2071)

3e-48

9) UM146_24511
( YP_006104108.1 )

hypothetical protein

NC_017630
(Escherichia coli UM146)

1e-44

10) SSON53_15670
( YP_005457642.1 )

protein encoded within IS

NC_016822
(Shigella sonnei 53G)

9e-45

11) SSON_2649
( YP_311507.1 )

protein encoded within IS

NC_007384
(Shigella sonnei Ss046)

9e-45

12) ECP_4578
( YP_672415.1 )

hypothetical protein

NC_008253
(Escherichia coli 536)

2e-44

13) UM146_21945
( YP_006113225.1 )

hypothetical protein

NC_017632
(Escherichia coli UM146)

6e-44

14) UTI89_C4944
( YP_543878.1 )

hypothetical protein

NC_007946
(Escherichia coli UTI89)

6e-44

15) N559_5150
( YP_008414931.1 )

hypothetical protein

NC_022078
(Klebsiella pneumoniae JM45)

1e-43

16) P12B_c1607
( YP_006168635.1 )

hypothetical protein

NC_017663
(Escherichia coli P12b)

1e-43

17) AHML_14800
( YP_008044075.1 )

IS66 family element, transposase

NC_021290
(Aeromonas hydrophila ML09-119)

6e-43

18) SFxv_4904
( YP_005711953.1 )

hypothetical protein

NC_017319
(Shigella flexneri 2002017)

3e-35

19) c3663
( NP_755538.1 )

hypothetical protein

NC_004431
(Escherichia coli CFT073)

6e-34

20) A225_0599
( YP_006496370.1 )

Mobile element protein

NC_018106
(Klebsiella oxytoca E718)

4e-33

21) O3O_02240
( YP_006786403.1 )

transposase

NC_018661
(Escherichia coli 2009EL-2071)

2e-32

22) O3K_04500
( YP_006777622.1 )

transposase

NC_018658
(Escherichia coli 2011C-3493)

2e-32

23) SbBS512_E1608
( YP_001880198.1 )

transposase family

NC_010658
(Shigella boydii CDC 3083-94)

4e-31

24) SEEB0189_00395
( YP_008258297.1 )

transposase IS66

NC_021817
(Salmonella enterica CFSAN000189)

4e-30

25) ETEC_p948_0460
( YP_006203860.1 )

ISSfl4 transposase (pseudogene)

NC_017724
(Escherichia coli ETEC H10407)

6e-29

26) A225_0594
( YP_006496365.1 )

transposase-like protein

NC_018106
(Klebsiella oxytoca E718)

2e-28

27) SbBS512_E1115
( YP_001879765.1 )

hypothetical protein

NC_010658
(Shigella boydii CDC 3083-94)

4e-28

28) RBRH_00738
( YP_004030744.1 )

transposase

NC_014723
(Burkholderia rhizoxinica HKI 454)

3e-26

29) SbBS512_A0290
( YP_001883292.1 )

transposase family

NC_010660
(Shigella boydii CDC 3083-94)

1e-22

30) LILAB_18515
( YP_004666683.1 )

IS66 family transposase truncated

NC_015711
(Myxococcus fulvus HW-1)

7e-20

31) MXAN_2101
( YP_630329.1 )

IS66 family transposase truncated

NC_008095
(Myxococcus xanthus DK 1622)

2e-15

32) blr1578
( NP_768218.1 )

hypothetical protein

NC_004463
(Bradyrhizobium japonicum USDA 110)

3e-15

33) AZL_b06110
( YP_003451818.1 )

transposase

NC_013856
(Azospirillum sp. B510)

7e-13

34) Maqu_4016
( YP_957205.1 )

ISPpu14, transposase Orf3

NC_008739
(Marinobacter aquaeolei VT8)

9e-13

35) Mmc1_0318
( YP_864251.1 )

transposase IS66

NC_008576
(Magnetococcus marinus MC-1)

4e-12

• Sequence Alignments

1) O3M_22935 in NC_018650


> AF200692|7|G7|12643209|AAK00461.1|Shigella_flexneri_2a_YSH6000T|-|13858..14205|-|-|unknown
Length=115

 Score =  188 bits (699),  Expect = 1e-49, Method: Compositional matrix adjust.
 Identities = 115/115 (100%), Positives = 115/115 (100%), Gaps = 0/115 (0%)

Query  21   MKTQSRHSELAKAFAYALNQWPALTYYANDGWVEIDNNIAENALRAVSLGRKNFLFFGSD  80
            MKTQSRHSELAKAFAYALNQWPALTYYANDGWVEIDNNIAENALRAVSLGRKNFLFFGSD
Sbjct  1    MKTQSRHSELAKAFAYALNQWPALTYYANDGWVEIDNNIAENALRAVSLGRKNFLFFGSD  60

Query  81   HGGERGALLYSLIGTCKLNDVDPESYLRHVLGVIADWPVNRVSELLPWRIALPAE  135
            HGGERGALLYSLIGTCKLNDVDPESYLRHVLGVIADWPVNRVSELLPWRIALPAE
Sbjct  61   HGGERGALLYSLIGTCKLNDVDPESYLRHVLGVIADWPVNRVSELLPWRIALPAE  115

2) O3O_02335 in NC_018661


> AF200692|7|G7|12643209|AAK00461.1|Shigella_flexneri_2a_YSH6000T|-|13858..14205|-|-|unknown
Length=115

 Score =  188 bits (699),  Expect = 1e-49, Method: Compositional matrix adjust.
 Identities = 115/115 (100%), Positives = 115/115 (100%), Gaps = 0/115 (0%)

Query  21   MKTQSRHSELAKAFAYALNQWPALTYYANDGWVEIDNNIAENALRAVSLGRKNFLFFGSD  80
            MKTQSRHSELAKAFAYALNQWPALTYYANDGWVEIDNNIAENALRAVSLGRKNFLFFGSD
Sbjct  1    MKTQSRHSELAKAFAYALNQWPALTYYANDGWVEIDNNIAENALRAVSLGRKNFLFFGSD  60

Query  81   HGGERGALLYSLIGTCKLNDVDPESYLRHVLGVIADWPVNRVSELLPWRIALPAE  135
            HGGERGALLYSLIGTCKLNDVDPESYLRHVLGVIADWPVNRVSELLPWRIALPAE
Sbjct  61   HGGERGALLYSLIGTCKLNDVDPESYLRHVLGVIADWPVNRVSELLPWRIALPAE  115

3) O3K_23020 in NC_018658


> AF200692|7|G7|12643209|AAK00461.1|Shigella_flexneri_2a_YSH6000T|-|13858..14205|-|-|unknown
Length=115

 Score =  188 bits (699),  Expect = 1e-49, Method: Compositional matrix adjust.
 Identities = 115/115 (100%), Positives = 115/115 (100%), Gaps = 0/115 (0%)

Query  21   MKTQSRHSELAKAFAYALNQWPALTYYANDGWVEIDNNIAENALRAVSLGRKNFLFFGSD  80
            MKTQSRHSELAKAFAYALNQWPALTYYANDGWVEIDNNIAENALRAVSLGRKNFLFFGSD
Sbjct  1    MKTQSRHSELAKAFAYALNQWPALTYYANDGWVEIDNNIAENALRAVSLGRKNFLFFGSD  60

Query  81   HGGERGALLYSLIGTCKLNDVDPESYLRHVLGVIADWPVNRVSELLPWRIALPAE  135
            HGGERGALLYSLIGTCKLNDVDPESYLRHVLGVIADWPVNRVSELLPWRIALPAE
Sbjct  61   HGGERGALLYSLIGTCKLNDVDPESYLRHVLGVIADWPVNRVSELLPWRIALPAE  115

4) SFxv_3252 in NC_017328


> AF200692|7|G7|12643209|AAK00461.1|Shigella_flexneri_2a_YSH6000T|-|13858..14205|-|-|unknown
Length=115

 Score =  188 bits (699),  Expect = 1e-49, Method: Compositional matrix adjust.
 Identities = 115/115 (100%), Positives = 115/115 (100%), Gaps = 0/115 (0%)

Query  21   MKTQSRHSELAKAFAYALNQWPALTYYANDGWVEIDNNIAENALRAVSLGRKNFLFFGSD  80
            MKTQSRHSELAKAFAYALNQWPALTYYANDGWVEIDNNIAENALRAVSLGRKNFLFFGSD
Sbjct  1    MKTQSRHSELAKAFAYALNQWPALTYYANDGWVEIDNNIAENALRAVSLGRKNFLFFGSD  60

Query  81   HGGERGALLYSLIGTCKLNDVDPESYLRHVLGVIADWPVNRVSELLPWRIALPAE  135
            HGGERGALLYSLIGTCKLNDVDPESYLRHVLGVIADWPVNRVSELLPWRIALPAE
Sbjct  61   HGGERGALLYSLIGTCKLNDVDPESYLRHVLGVIADWPVNRVSELLPWRIALPAE  115

5) SF2970 in NC_004337


> AF200692|7|G7|12643209|AAK00461.1|Shigella_flexneri_2a_YSH6000T|-|13858..14205|-|-|unknown
Length=115

 Score =  186 bits (689),  Expect = 8e-49, Method: Compositional matrix adjust.
 Identities = 115/115 (100%), Positives = 115/115 (100%), Gaps = 0/115 (0%)

Query  1    MKTQSRHSELAKAFAYALNQWPALTYYANDGWVEIDNNIAENALRAVSLGRKNFLFFGSD  60
            MKTQSRHSELAKAFAYALNQWPALTYYANDGWVEIDNNIAENALRAVSLGRKNFLFFGSD
Sbjct  1    MKTQSRHSELAKAFAYALNQWPALTYYANDGWVEIDNNIAENALRAVSLGRKNFLFFGSD  60

Query  61   HGGERGALLYSLIGTCKLNDVDPESYLRHVLGVIADWPVNRVSELLPWRIALPAE  115
            HGGERGALLYSLIGTCKLNDVDPESYLRHVLGVIADWPVNRVSELLPWRIALPAE
Sbjct  61   HGGERGALLYSLIGTCKLNDVDPESYLRHVLGVIADWPVNRVSELLPWRIALPAE  115

6) SBO_4151 in NC_007613


> AF200692|7|G7|12643209|AAK00461.1|Shigella_flexneri_2a_YSH6000T|-|13858..14205|-|-|unknown
Length=115

 Score =  185 bits (685),  Expect = 2e-48, Method: Compositional matrix adjust.
 Identities = 113/115 (99%), Positives = 113/115 (99%), Gaps = 0/115 (0%)

Query  21   MKTLSRHSELAKAFAYALNQWPALTYYANDGWVEIDNNIAENALRAVSLGRKNFLFFGSD  80
            MKT SRHSELAKAFAYALNQWPALTYYANDGWVEIDNNIAENALRAVSLGRKNFLFFGSD
Sbjct  1    MKTQSRHSELAKAFAYALNQWPALTYYANDGWVEIDNNIAENALRAVSLGRKNFLFFGSD  60

Query  81   HGGERGALLYSLIGTCKLNDVDPESYLRHVLGVIADWPVNRVSELLPWRIALPAK  135
            HGGERGALLYSLIGTCKLNDVDPESYLRHVLGVIADWPVNRVSELLPWRIALPA 
Sbjct  61   HGGERGALLYSLIGTCKLNDVDPESYLRHVLGVIADWPVNRVSELLPWRIALPAE  115

7) EC042_4591 in NC_017626


> AF200692|7|G7|12643209|AAK00461.1|Shigella_flexneri_2a_YSH6000T|-|13858..14205|-|-|unknown
Length=115

 Score =  184 bits (684),  Expect = 2e-48, Method: Compositional matrix adjust.
 Identities = 113/115 (99%), Positives = 114/115 (99%), Gaps = 0/115 (0%)

Query  36   MKTLSRHSELAKAFAYALNQWPALTYYANDGWVEIDNDIAENALRAVSLGRKNFLFFGSD  95
            MKT SRHSELAKAFAYALNQWPALTYYANDGWVEIDN+IAENALRAVSLGRKNFLFFGSD
Sbjct  1    MKTQSRHSELAKAFAYALNQWPALTYYANDGWVEIDNNIAENALRAVSLGRKNFLFFGSD  60

Query  96   HGGERGALLYSLIGTCKLNDVDPESYLRHVLGVIADWPVNRVSELLPWRIALPAE  150
            HGGERGALLYSLIGTCKLNDVDPESYLRHVLGVIADWPVNRVSELLPWRIALPAE
Sbjct  61   HGGERGALLYSLIGTCKLNDVDPESYLRHVLGVIADWPVNRVSELLPWRIALPAE  115

8) O3O_21135 in NC_018661


> AF200692|7|G7|12643209|AAK00461.1|Shigella_flexneri_2a_YSH6000T|-|13858..14205|-|-|unknown
Length=115

 Score =  184 bits (682),  Expect = 3e-48, Method: Compositional matrix adjust.
 Identities = 114/115 (99%), Positives = 114/115 (99%), Gaps = 0/115 (0%)

Query  29   MKTLSRHSELAKAFAYALNQWPALTYYANDGWVEIDNNIAENALRAVSLGRKNFLFFGSD  88
            MKT SRHSELAKAFAYALNQWPALTYYANDGWVEIDNNIAENALRAVSLGRKNFLFFGSD
Sbjct  1    MKTQSRHSELAKAFAYALNQWPALTYYANDGWVEIDNNIAENALRAVSLGRKNFLFFGSD  60

Query  89   HGGERGALLYSLIGTCKLNDVDPESYLRHVLGVIADWPVNRVSELLPWRIALPAE  143
            HGGERGALLYSLIGTCKLNDVDPESYLRHVLGVIADWPVNRVSELLPWRIALPAE
Sbjct  61   HGGERGALLYSLIGTCKLNDVDPESYLRHVLGVIADWPVNRVSELLPWRIALPAE  115

9) UM146_24511 in NC_017630


> AF200692|7|G7|12643209|AAK00461.1|Shigella_flexneri_2a_YSH6000T|-|13858..14205|-|-|unknown
Length=115

 Score =  172 bits (636),  Expect = 1e-44, Method: Compositional matrix adjust.
 Identities = 101/115 (88%), Positives = 110/115 (96%), Gaps = 0/115 (0%)

Query  29   MKTLSRHSELAKAFAYALNQWPALTYYADDGWAEADNNIAENALRMVSLGRKNYLFFGSD  88
            MKT SRHSELAKAFAYALNQWPALTYYA+DGW E DNNIAENALR VSLGRKN+LFFGSD
Sbjct  1    MKTQSRHSELAKAFAYALNQWPALTYYANDGWVEIDNNIAENALRAVSLGRKNFLFFGSD  60

Query  89   HGGERGALLYSLIGTCKLNGVEPESYLRYVLDVIADWPINRVGELLPWRVALPTE  143
            HGGERGALLYSLIGTCKLN+V+PESYLR VL+VIADWP+NRV+ELLPWR+ALP+E
Sbjct  61   HGGERGALLYSLIGTCKLNDVDPESYLRHVLGVIADWPVNRVSELLPWRIALPAE  115

10) SSON53_15670 in NC_016822


> AF200692|7|G7|12643209|AAK00461.1|Shigella_flexneri_2a_YSH6000T|-|13858..14205|-|-|unknown
Length=115

 Score =  172 bits (637),  Expect = 9e-45, Method: Compositional matrix adjust.
 Identities = 101/115 (88%), Positives = 110/115 (96%), Gaps = 0/115 (0%)

Query  38   MKTLSRHSELAKAFAYALNQWPALTYYADDGWAEADNNIAENALRMVSLGRKNYLFFGSD  97
            MKT SRHSELAKAFAYALNQWPALTYYA+DGW E DNNIAENALR VSLGRKN+LFFGSD
Sbjct  1    MKTQSRHSELAKAFAYALNQWPALTYYANDGWVEIDNNIAENALRAVSLGRKNFLFFGSD  60

Query  98   HGGERGALLYSLIGTCKLNGVEPESYLRYVLDVIADWPINRVGELLPWRVALPTE  152
            HGGERGALLYSLIGTCKLN+V+PESYLR VL+VIADWP+NRV+ELLPWR+ALP+E
Sbjct  61   HGGERGALLYSLIGTCKLNDVDPESYLRHVLGVIADWPVNRVSELLPWRIALPAE  115

11) SSON_2649 in NC_007384


> AF200692|7|G7|12643209|AAK00461.1|Shigella_flexneri_2a_YSH6000T|-|13858..14205|-|-|unknown
Length=115

 Score =  172 bits (637),  Expect = 9e-45, Method: Compositional matrix adjust.
 Identities = 101/115 (88%), Positives = 110/115 (96%), Gaps = 0/115 (0%)

Query  38   MKTLSRHSELAKAFAYALNQWPALTYYADDGWAEADNNIAENALRMVSLGRKNYLFFGSD  97
            MKT SRHSELAKAFAYALNQWPALTYYA+DGW E DNNIAENALR VSLGRKN+LFFGSD
Sbjct  1    MKTQSRHSELAKAFAYALNQWPALTYYANDGWVEIDNNIAENALRAVSLGRKNFLFFGSD  60

Query  98   HGGERGALLYSLIGTCKLNGVEPESYLRYVLDVIADWPINRVGELLPWRVALPTE  152
            HGGERGALLYSLIGTCKLN+V+PESYLR VL+VIADWP+NRV+ELLPWR+ALP+E
Sbjct  61   HGGERGALLYSLIGTCKLNDVDPESYLRHVLGVIADWPVNRVSELLPWRIALPAE  115

12) ECP_4578 in NC_008253


> AF200692|7|G7|12643209|AAK00461.1|Shigella_flexneri_2a_YSH6000T|-|13858..14205|-|-|unknown
Length=115

 Score =  171 bits (634),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 105/106 (99%), Positives = 106/106 (100%), Gaps = 0/106 (0%)

Query  20   VAKAFAYALNQWPALTYYANDGWVEIDNNIAENALRAVSLGRKNFLFFGSDHGGERGALL  79
            +AKAFAYALNQWPALTYYANDGWVEIDNNIAENALRAVSLGRKNFLFFGSDHGGERGALL
Sbjct  10   LAKAFAYALNQWPALTYYANDGWVEIDNNIAENALRAVSLGRKNFLFFGSDHGGERGALL  69

Query  80   YSLIGTCKLNDVDPESYLRHVLGVIADWPVNRVSELLPWRIALPAE  125
            YSLIGTCKLNDVDPESYLRHVLGVIADWPVNRVSELLPWRIALPAE
Sbjct  70   YSLIGTCKLNDVDPESYLRHVLGVIADWPVNRVSELLPWRIALPAE  115

13) UM146_21945 in NC_017632


> AF200692|7|G7|12643209|AAK00461.1|Shigella_flexneri_2a_YSH6000T|-|13858..14205|-|-|unknown
Length=115

 Score =  170 bits (627),  Expect = 6e-44, Method: Compositional matrix adjust.
 Identities = 104/106 (99%), Positives = 106/106 (100%), Gaps = 0/106 (0%)

Query  2    VAKAFAYALNQWPALTYYANDGWVEIDNNIAENALRAVSLGRKNFLFFGSDHGGERGALL  61
            +AKAFAYALNQWPALTYYANDGWVEIDNNIAENALRAVSLGRKNFLFFGSDHGGERGALL
Sbjct  10   LAKAFAYALNQWPALTYYANDGWVEIDNNIAENALRAVSLGRKNFLFFGSDHGGERGALL  69

Query  62   YSLIGTCKLNDVDPESYLRHVLAVIADWPVNRVSELLPWRIALPAE  107
            YSLIGTCKLNDVDPESYLRHVL+VIADWPVNRVSELLPWRIALPAE
Sbjct  70   YSLIGTCKLNDVDPESYLRHVLGVIADWPVNRVSELLPWRIALPAE  115

14) UTI89_C4944 in NC_007946


> AF200692|7|G7|12643209|AAK00461.1|Shigella_flexneri_2a_YSH6000T|-|13858..14205|-|-|unknown
Length=115

 Score =  170 bits (627),  Expect = 6e-44, Method: Compositional matrix adjust.
 Identities = 104/106 (99%), Positives = 106/106 (100%), Gaps = 0/106 (0%)

Query  2    VAKAFAYALNQWPALTYYANDGWVEIDNNIAENALRAVSLGRKNFLFFGSDHGGERGALL  61
            +AKAFAYALNQWPALTYYANDGWVEIDNNIAENALRAVSLGRKNFLFFGSDHGGERGALL
Sbjct  10   LAKAFAYALNQWPALTYYANDGWVEIDNNIAENALRAVSLGRKNFLFFGSDHGGERGALL  69

Query  62   YSLIGTCKLNDVDPESYLRHVLAVIADWPVNRVSELLPWRIALPAE  107
            YSLIGTCKLNDVDPESYLRHVL+VIADWPVNRVSELLPWRIALPAE
Sbjct  70   YSLIGTCKLNDVDPESYLRHVLGVIADWPVNRVSELLPWRIALPAE  115

15) N559_5150 in NC_022078


> AF200692|7|G7|12643209|AAK00461.1|Shigella_flexneri_2a_YSH6000T|-|13858..14205|-|-|unknown
Length=115

 Score =  169 bits (624),  Expect = 1e-43, Method: Compositional matrix adjust.
 Identities = 99/115 (87%), Positives = 110/115 (96%), Gaps = 0/115 (0%)

Query  1    MKTLSRHSELAKAIAYALNQWPALTYYADDGWAEADNNIAENALRMVSLGRKNYLFFGSD  60
            MKT SRHSELAKA+AYALNQWPALTYYA+DGW E DNNIAENALR VSLGRKN+LFFGSD
Sbjct  1    MKTQSRHSELAKAFAYALNQWPALTYYANDGWVEIDNNIAENALRAVSLGRKNFLFFGSD  60

Query  61   HGGERGALLYNLIGTCKLNGVEPESYLRYVLDVIADWPINRVGELLPWRVALPTE  115
            HGGERGALLY+LIGTCKLN+V+PESYLR VL+VIADWP+NRV+ELLPWR+ALP+E
Sbjct  61   HGGERGALLYSLIGTCKLNDVDPESYLRHVLGVIADWPVNRVSELLPWRIALPAE  115

16) P12B_c1607 in NC_017663


> AF200692|7|G7|12643209|AAK00461.1|Shigella_flexneri_2a_YSH6000T|-|13858..14205|-|-|unknown
Length=115

 Score =  168 bits (622),  Expect = 1e-43, Method: Compositional matrix adjust.
 Identities = 96/115 (84%), Positives = 109/115 (95%), Gaps = 0/115 (0%)

Query  29   VKTLSRHSELAKAFTYVLNQWPALAYYTDDGWAEADNNIAENALRMVSLGRKNYLFFGSD  88
            +KT SRHSELAKAF+Y LNQWPAL+YY++DGW E DNNIAENALR VSLGRKN+LFFGSD
Sbjct  1    MKTQSRHSELAKAFAYALNQWPALTYYANDGWVEIDNNIAENALRAVSLGRKNFLFFGSD  60

Query  89   HGGERGALLYSLLGTCKLNGVEPESYLRYVLDVIADWPINRVSELLPWRITLPTE  143
            HGGERGALLYSL+GTCKLN+V+PESYLR VL+VIADWP+NRVSELLPWRI+LP+E
Sbjct  61   HGGERGALLYSLIGTCKLNDVDPESYLRHVLGVIADWPVNRVSELLPWRIALPAE  115

17) AHML_14800 in NC_021290


> AF200692|7|G7|12643209|AAK00461.1|Shigella_flexneri_2a_YSH6000T|-|13858..14205|-|-|unknown
Length=115

 Score =  166 bits (614),  Expect = 6e-43, Method: Compositional matrix adjust.
 Identities = 97/111 (88%), Positives = 107/111 (97%), Gaps = 0/111 (0%)

Query  3    TSHSELAKAFAYALNQWSALTYYAENGWVEVDNNIAENALRLVSLGRKNFLFFGSDHGGE  62
            + HSELAKAFAYALNQW+ALTYYA++GWVE+DNNIAENALR VSLGRKNFLFFGSDHGGE
Sbjct  5    SRHSELAKAFAYALNQWPALTYYANDGWVEIDNNIAENALRAVSLGRKNFLFFGSDHGGE  64

Query  63   RGALLYSLLGTCRLNGVDPEHYLRHVLNVIADWPVNRVGELLPWRVALPAE  113
            RGALLYSL+GTC+LN+VDPE YLRHVL VIADWPVNRV+ELLPWR+ALPAE
Sbjct  65   RGALLYSLIGTCKLNDVDPESYLRHVLGVIADWPVNRVSELLPWRIALPAE  115

18) SFxv_4904 in NC_017319


> AF200692|7|G7|12643209|AAK00461.1|Shigella_flexneri_2a_YSH6000T|-|13858..14205|-|-|unknown
Length=115

 Score =  141 bits (517),  Expect = 3e-35, Method: Compositional matrix adjust.
 Identities = 71/113 (63%), Positives = 93/113 (83%), Gaps = 0/113 (0%)

Query  44   TLSKKSRLGEAFSYVLNQWDALCYYSDDGLAEADNNTAERALRTVCLGKKNYMFFGSDHG  103
            T S+ S L+ AF+Y LNQW AL YY++DG  E DNN AE ALR+V LG+KN++FFGSDHG
Sbjct  3    TQSRHSELAKAFAYALNQWPALTYYANDGWVEIDNNIAENALRAVSLGRKNFLFFGSDHG  62

Query  104  GDRGALLYGLIGSCRLNGIDPEAYLRHILSVLPEWPSNRVDELLPWNVVLTDK  156
            G+RGALLY+LIG+C+LN++DPE+YLRH+L+V+++WP NRV ELLPW + L   
Sbjct  63   GERGALLYSLIGTCKLNDVDPESYLRHVLGVIADWPVNRVSELLPWRIALPAE  115

19) c3663 in NC_004431


> AF200692|7|G7|12643209|AAK00461.1|Shigella_flexneri_2a_YSH6000T|-|13858..14205|-|-|unknown
Length=115

 Score =  136 bits (501),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 74/115 (65%), Positives = 97/115 (85%), Gaps = 0/115 (0%)

Query  12   MKTLSRHSDTAKAFAYLLKQWDALSVYCSNGWVEIDNNITENALRGVAVGRKNWMFAGSD  71
            MKT SRHS+ AKAFAY L+QW AL+ Y ++GWVEIDNNI+ENALR+V++GRKN +F GSD
Sbjct  1    MKTQSRHSELAKAFAYALNQWPALTYYANDGWVEIDNNIAENALRAVSLGRKNFLFFGSD  60

Query  72   SGGEHAAVLYSLIGTCRLNNVEPEKWLRYVIEHIQDWPANRVRDLLPWKVDLSSQ  126
             GGE++A+LYSLIGTC+LN+V+PE  LR V+  I DWP NRV +LLPW++ L+++
Sbjct  61   HGGERGALLYSLIGTCKLNDVDPESYLRHVLGVIADWPVNRVSELLPWRIALPAE  115

20) A225_0599 in NC_018106


> AF200692|7|G7|12643209|AAK00461.1|Shigella_flexneri_2a_YSH6000T|-|13858..14205|-|-|unknown
Length=115

 Score =  134 bits (490),  Expect = 4e-33, Method: Compositional matrix adjust.
 Identities = 69/115 (60%), Positives = 94/115 (82%), Gaps = 0/115 (0%)

Query  15   MGMLSRHSDTAKAFTYLLKQWDALNEYCRNGWVEIDNNLCENALRVVALGRRNYMLFGSD  74
            M   SRHS+ AKAF+Y L+QW AL  Y  +GWVEIDNN+ ENALR V+LGR+N+++FGSD
Sbjct  1    MKTQSRHSELAKAFAYALNQWPALTYYANDGWVEIDNNIAENALRAVSLGRKNFLFFGSD  60

Query  75   GGGDSAAVMYSLIGSCKLNGIEPEAWLRHVVSVINTWPANRVKELLPWNVTLSVN  129
             GG+ +A++YSLIG+CKLN+++PE+ LRHV++VI  WP NRV ELLPW ++L+ +
Sbjct  61   HGGERGALLYSLIGTCKLNDVDPESYLRHVLGVIADWPVNRVSELLPWRIALPAE  115

21) O3O_02240 in NC_018661


> AF200692|7|G7|12643209|AAK00461.1|Shigella_flexneri_2a_YSH6000T|-|13858..14205|-|-|unknown
Length=115

 Score =  131 bits (481),  Expect = 2e-32, Method: Compositional matrix adjust.
 Identities = 68/113 (61%), Positives = 87/113 (77%), Gaps = 0/113 (0%)

Query  20   TLSKKCRLRDAFRYIRKHWVALCNFCDDGLAEADNNTAERALRAVCLGKKNYVFFGSDHG  79
            T S+   L  AF Y  ++W AL  + +DG  E DNN AE ALRAV LG+KN++FFGSDHG
Sbjct  3    TQSRHSELAKAFAYALNQWPALTYYANDGWVEIDNNIAENALRAVSLGRKNFLFFGSDHG  62

Query  80   GERGALLYGLIGTCRLNGIDPEAYLRHILSVLPEWPSNRVDELLPWNVVLTNK  132
            GERGALLY+LIGTC+LN++DPE+YLRH+L+V+++WP NRV ELLPW + L   
Sbjct  63   GERGALLYSLIGTCKLNDVDPESYLRHVLGVIADWPVNRVSELLPWRIALPAE  115

22) O3K_04500 in NC_018658


> AF200692|7|G7|12643209|AAK00461.1|Shigella_flexneri_2a_YSH6000T|-|13858..14205|-|-|unknown
Length=115

 Score =  131 bits (481),  Expect = 2e-32, Method: Compositional matrix adjust.
 Identities = 68/113 (61%), Positives = 87/113 (77%), Gaps = 0/113 (0%)

Query  20   TLSKKCRLRDAFRYIRKHWVALCNFCDDGLAEADNNTAERALRAVCLGKKNYVFFGSDHG  79
            T S+   L  AF Y  ++W AL  + +DG  E DNN AE ALRAV LG+KN++FFGSDHG
Sbjct  3    TQSRHSELAKAFAYALNQWPALTYYANDGWVEIDNNIAENALRAVSLGRKNFLFFGSDHG  62

Query  80   GERGALLYGLIGTCRLNGIDPEAYLRHILSVLPEWPSNRVDELLPWNVVLTNK  132
            GERGALLY+LIGTC+LN++DPE+YLRH+L+V+++WP NRV ELLPW + L   
Sbjct  63   GERGALLYSLIGTCKLNDVDPESYLRHVLGVIADWPVNRVSELLPWRIALPAE  115

23) SbBS512_E1608 in NC_010658


> AF200692|7|G7|12643209|AAK00461.1|Shigella_flexneri_2a_YSH6000T|-|13858..14205|-|-|unknown
Length=115

 Score =  127 bits (465),  Expect = 4e-31, Method: Compositional matrix adjust.
 Identities = 68/110 (62%), Positives = 90/110 (82%), Gaps = 0/110 (0%)

Query  31   KTLSKHAEMAKAFDYILNHWNALNEFCRDGWVEIDNNIGENALRSVAVGRKNYLFFGSDK  90
            KT S+H+E+AKAF Y LN+W AL  +  DGWVEIDNNI+ENALR+V++GRKN+LFFGSD 
Sbjct  2    KTQSRHSELAKAFAYALNQWPALTYYANDGWVEIDNNIAENALRAVSLGRKNFLFFGSDH  61

Query  91   GGESAAIIYSLLVTCKQNEVEPEDWLREVIEKLNDWPSNQVHELLPWNFS  140
            GGE +A++YSL+ TCK N+V+PE  LR+V+  + DWP N+V ELLPW ++
Sbjct  62   GGERGALLYSLIGTCKLNDVDPESYLRHVLGVIADWPVNRVSELLPWRIA  111

24) SEEB0189_00395 in NC_021817


> AF200692|7|G7|12643209|AAK00461.1|Shigella_flexneri_2a_YSH6000T|-|13858..14205|-|-|unknown
Length=115

 Score =  124 bits (453),  Expect = 4e-30, Method: Compositional matrix adjust.
 Identities = 69/105 (66%), Positives = 89/105 (85%), Gaps = 1/105 (0%)

Query  11   TLSKKSRLSVAFSYALNQWDAL-YYCDNGLAETDNNAAERALQAVCLDKKNYIFFGSDHG  69
            T S+ S L+ AF+YALNQW AL YY ++G  E DNN AE AL+AV L++KN++FFGSDHG
Sbjct  3    TQSRHSELAKAFAYALNQWPALTYYANDGWVEIDNNIAENALRAVSLGRKNFLFFGSDHG  62

Query  70   GERGALLYGLIGTCSLNGIDPEAYLRHILSVLLEWPSNKVAELLP  114
            GERGALLY+LIGTC LN++DPE+YLRH+L+V+ +WP N+V+ELLP
Sbjct  63   GERGALLYSLIGTCKLNDVDPESYLRHVLGVIADWPVNRVSELLP  107

25) ETEC_p948_0460 in NC_017724


> AF200692|7|G7|12643209|AAK00461.1|Shigella_flexneri_2a_YSH6000T|-|13858..14205|-|-|unknown
Length=115

 Score =  120 bits (437),  Expect = 6e-29, Method: Compositional matrix adjust.
 Identities = 68/106 (65%), Positives = 87/106 (83%), Gaps = 0/106 (0%)

Query  43   KTLSKHAEMAKAFDYILNHWNALNEFCRDGQVEIDNNIGENALRSVAVGRKNYLFFGSDK  102
            KT S+H+E+AKAF Y LN+W AL  +  DG VEIDNNI+ENALR+V++GRKN+LFFGSD 
Sbjct  2    KTQSRHSELAKAFAYALNQWPALTYYANDGWVEIDNNIAENALRAVSLGRKNFLFFGSDH  61

Query  103  GGESAAIIYSLLVTCKLNEVEPEDWLREVIVKLNDWPSNRVHELLP  148
            GGE +A++YSL+ TCKLN+V+PE  LR+V+  + DWP NRV ELLP
Sbjct  62   GGERGALLYSLIGTCKLNDVDPESYLRHVLGVIADWPVNRVSELLP  107

26) A225_0594 in NC_018106


> AF200692|7|G7|12643209|AAK00461.1|Shigella_flexneri_2a_YSH6000T|-|13858..14205|-|-|unknown
Length=115

 Score =  118 bits (431),  Expect = 2e-28, Method: Compositional matrix adjust.
 Identities = 64/102 (63%), Positives = 88/102 (87%), Gaps = 0/102 (0%)

Query  1    MAKAFAYLLKQWDGLNEYCRNGQVEIDNNIGENALRSVAVGRKNYLFFGSDNGGEAAAII  60
            +AKAFAY L+QW +L  Y  +G VEIDNNI+ENALR+V++GRKN+LFFGSD+GGE +A++
Sbjct  10   LAKAFAYALNQWPALTYYANDGWVEIDNNIAENALRAVSLGRKNFLFFGSDHGGERGALL  69

Query  61   YSLLGTCRLNGVEPENWLREVIGKINNWPSNRVHDLLPWNLS  102
            YSL+GTC+LN+V+PE+ LR+V+G I +WP NRV +LLPW ++
Sbjct  70   YSLIGTCKLNDVDPESYLRHVLGVIADWPVNRVSELLPWRIA  111

27) SbBS512_E1115 in NC_010658


> AF200692|7|G7|12643209|AAK00461.1|Shigella_flexneri_2a_YSH6000T|-|13858..14205|-|-|unknown
Length=115

 Score =  117 bits (427),  Expect = 4e-28, Method: Compositional matrix adjust.
 Identities = 60/91 (66%), Positives = 77/91 (85%), Gaps = 0/91 (0%)

Query  1    MCNFSDDGLAEADNNAAERALRAVCLGKKNFMFFGSDHGGERGALLYGLIGTCRLNGIDP  60
            +  +++DG  E DNN AE ALRAV LG+KNF+FFGSDHGGERGALLY+LIGTC+LN++DP
Sbjct  24   LTYYANDGWVEIDNNIAENALRAVSLGRKNFLFFGSDHGGERGALLYSLIGTCKLNDVDP  83

Query  61   EAYLRYILSVLPEWPSNRVDELLPWNVALTN  91
            E+YLR +L+V+++WP NRV ELLPW +AL  
Sbjct  84   ESYLRHVLGVIADWPVNRVSELLPWRIALPA  114

28) RBRH_00738 in NC_014723


> AF200692|7|G7|12643209|AAK00461.1|Shigella_flexneri_2a_YSH6000T|-|13858..14205|-|-|unknown
Length=115

 Score =  111 bits (403),  Expect = 3e-26, Method: Compositional matrix adjust.
 Identities = 61/114 (54%), Positives = 92/114 (81%), Gaps = 0/114 (0%)

Query  2    LDTLSRKSDTSRAILYALNRWTALMRYCDDGRLKIDNLPVERALRGVAIGRRNYLFAGAD  61
            + T SR S+ ++A+ YALN+W AL  Y +DG++ IDN   E ALR+V++GR+N+LF G+D
Sbjct  1    MKTQSRHSELAKAFAYALNQWPALTYYANDGWVEIDNNIAENALRAVSLGRKNFLFFGSD  60

Query  62   CGGERAAAIYSVIGSAKLNNIDPEGYLREVLARIAEHPINRVDELLPWNFSFAT  115
             GGER+A +YS+IG+ KLN++DPE+YLR+VL+ IA+ P+NRV ELLPW +++++
Sbjct  61   HGGERGALLYSLIGTCKLNDVDPESYLRHVLGVIADWPVNRVSELLPWRIALPA  114

29) SbBS512_A0290 in NC_010660


> AF200692|7|G7|12643209|AAK00461.1|Shigella_flexneri_2a_YSH6000T|-|13858..14205|-|-|unknown
Length=115

 Score = 99.1 bits (357),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 55/89 (62%), Positives = 74/89 (84%), Gaps = 0/89 (0%)

Query  33   SLNVYCRNGQVEIDNNIGENALRSVAVGRKNYLFFGSDNGGESAAIIYSLLVTCKLNGVE  92
            +L  Y  +G VEIDNNI+ENALR+V++GRKN+LFFGSD+GGE +A++YSL+ TCKLN+V+
Sbjct  23   ALTYYANDGWVEIDNNIAENALRAVSLGRKNFLFFGSDHGGERGALLYSLIGTCKLNDVD  82

Query  93   PEDWLREVIVKLNDWPSNRVHELLPWNFS  121
            PE  LR+V+  + DWP NRV ELLPW ++
Sbjct  83   PESYLRHVLGVIADWPVNRVSELLPWRIA  111

30) BTH_II2042 in NC_007650


> AF200692|7|G7|12643209|AAK00461.1|Shigella_flexneri_2a_YSH6000T|-|13858..14205|-|-|unknown
Length=115

 Score = 98.6 bits (355),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 57/93 (62%), Positives = 76/93 (82%), Gaps = 0/93 (0%)

Query  25   NRWEALTRYCDDGQLEIDNLPVERALRGVAIGRRNYLFAGADSGGERAAAIYSLIGTAKL  84
            N+W ALT Y +DG +EIDN   E ALR+V++GR+N+LF G+D GGER+A +YSLIGT KL
Sbjct  19   NQWPALTYYANDGWVEIDNNIAENALRAVSLGRKNFLFFGSDHGGERGALLYSLIGTCKL  78

Query  85   NGIDPEAYLRFVLARIADHAINRVDQLMPWAIA  117
            N++DPE+YLR VL+ IAD ++NRV +L+PW IA
Sbjct  79   NDVDPESYLRHVLGVIADWPVNRVSELLPWRIA  111

31) LILAB_18515 in NC_015711


> AF200692|7|G7|12643209|AAK00461.1|Shigella_flexneri_2a_YSH6000T|-|13858..14205|-|-|unknown
Length=115

 Score = 89.9 bits (322),  Expect = 7e-20, Method: Compositional matrix adjust.
 Identities = 49/108 (46%), Positives = 77/108 (72%), Gaps = 2/108 (1%)

Query  33   HPPKSPLGQAISYALKRWEALTRFVENERLPLDNNRSEAALRKAALGRKNFLFVGHEAAG  92
            ++  S L++A++YAL++W ALT + ++ ++ +DNN +E ALR  +LGRKNFLF G + +G
Sbjct  4    QSRHSELAKAFAYALNQWPALTYYANDGWVEIDNNIAENALRAVSLGRKNFLFFGSDHGG  63

Query  93   ENLAGLYALVATCEANGVNPEEYLADVLLRVQTHPNSRIRELLPHEWK  140
            E  A LY+L++TC  N+V+PE YL +VL  +   P +R+ ELLP  W+
Sbjct  64   ERGALLYSLIGTCKLNDVDPESYLRHVLGVIADWPVNRVSELLP--WR  109

32) MXAN_2101 in NC_008095


> AF200692|7|G7|12643209|AAK00461.1|Shigella_flexneri_2a_YSH6000T|-|13858..14205|-|-|unknown
Length=115

 Score = 75.5 bits (267),  Expect = 2e-15, Method: Compositional matrix adjust.
 Identities = 41/94 (44%), Positives = 66/94 (71%), Gaps = 5/94 (5%)

Query  16   FVENERLPLDNNRSESALRKAALGRKNFLFVGHEAAGENLAGLYALVATCEANQVNPEEY  75
            + ++ ++ +DNN +E+ALR  +LGRKNFLF G + +GE  A LY+L++TC  N+V+PE Y
Sbjct  27   YANDGWVEIDNNIAENALRAVSLGRKNFLFFGSDHGGERGALLYSLIGTCKLNDVDPESY  86

Query  76   LADVLLRVQTHPNSRIGELLPHEWKRRRVAEPPN  109
            L +VL  +   P +R++ELLP     +R+A P++
Sbjct  87   LRHVLGVIADWPVNRVSELLP-----WRIALPAE  115

33) blr1578 in NC_004463


> AF200692|7|G7|12643209|AAK00461.1|Shigella_flexneri_2a_YSH6000T|-|13858..14205|-|-|unknown
Length=115

 Score = 74.4 bits (263),  Expect = 3e-15, Method: Compositional matrix adjust.
 Identities = 43/90 (48%), Positives = 67/90 (75%), Gaps = 1/90 (1%)

Query  15   RWEGLTRFIDDGRIELDKNAVERAIRPITLNRKNALFAGSDGGAEHWAVIASLIKTCKLN  74
            +W +LT + +DG++E+D+N  E A+R+++L RKN LF GSD G+E+ A++ SLI TCKLN
Sbjct  20   QWPALTYYANDGWVEIDNNIAENALRAVSLGRKNFLFFGSDHGGERGALLYSLIGTCKLN  79

Query  75   DVDPLAYPTDVLNKIVNGHPNSEIHDLLPW  104
            DVDP +Y  +VL  ++ + P + + +LLPW
Sbjct  80   DVDPESYLRHVLG-VIADWPVNRVSELLPW  108

34) Pden_3306 in NC_008687


> AF200692|7|G7|12643209|AAK00461.1|Shigella_flexneri_2a_YSH6000T|-|13858..14205|-|-|unknown
Length=115

 Score = 71.8 bits (253),  Expect = 2e-14, Method: Compositional matrix adjust.
 Identities = 47/105 (45%), Positives = 70/105 (67%), Gaps = 1/105 (0%)

Query  33   SMKSRLGEKLAYIHRHWDGLQTFLHDGRVEIDSNSVENLIRPIALTRKNALFAGHDEGGR  92
            S  S L+  +AY   +W +L  + +DG+VEID+N  EN +R+++L RKN LF G D+GG 
Sbjct  5    SRHSELAKAFAYALNQWPALTYYANDGWVEIDNNIAENALRAVSLGRKNFLFFGSDHGGE  64

Query  93   SWARIASLIATAKVNGVEPFAYLKTTLEAVAASHPQARIDDLLPW  137
              A + SLI+T K+N+V+P +YL+  L +V A  P  R+ +LLPW
Sbjct  65   RGALLYSLIGTCKLNDVDPESYLRHVL-GVIADWPVNRVSELLPW  108

35) AZL_b06110 in NC_013856


> AF200692|7|G7|12643209|AAK00461.1|Shigella_flexneri_2a_YSH6000T|-|13858..14205|-|-|unknown
Length=115

 Score = 66.8 bits (234),  Expect = 7e-13, Method: Compositional matrix adjust.
 Identities = 50/99 (51%), Positives = 74/99 (75%), Gaps = 0/99 (0%)

Query  1    MAKAMDYMLTRWEGFTRFLHDGRVCLTNNaaeralrgialgrraWLFCGSDRGGQRAAAM  60
            +AKA  Y L +W ++T + +DG+V + NN AE ALR+++LGR+  LF GSD+GG+R+A +
Sbjct  10   LAKAFAYALNQWPALTYYANDGWVEIDNNIAENALRAVSLGRKNFLFFGSDHGGERGALL  69

Query  61   YSLIVTAKMNDIDPQAWLADVLARINDLPQTKLHELLPW  99
            YSLI T K+ND+DP++ L +VL+ I D P  ++ ELLPW
Sbjct  70   YSLIGTCKLNDVDPESYLRHVLGVIADWPVNRVSELLPW  108

36) Maqu_4016 in NC_008739


> AF200692|7|G7|12643209|AAK00461.1|Shigella_flexneri_2a_YSH6000T|-|13858..14205|-|-|unknown
Length=115

 Score = 66.3 bits (232),  Expect = 9e-13, Method: Compositional matrix adjust.
 Identities = 50/107 (47%), Positives = 73/107 (69%), Gaps = 2/107 (1%)

Query  15   AKALDYSLKRWEALTRYLDDGAVPIDNNWVENQIRPWALGRSNWLFAGSLRSGQRAAAVM  74
            AKA+ Y+L++W ALT Y +DG V IDNN  EN +R+ +LGR N LF GS ++G+R+A + 
Sbjct  11   AKAFAYALNQWPALTYYANDGWVEIDNNIAENALRAVSLGRKNFLFFGSDHGGERGALLY  70

Query  75   TLIQSAKLNGHDPYAYLKDVLTRLPTQKNNAIDELLPHNWTPAIPDK  121
            +LI + KLN+ DP +YL++VL  ++    N + ELLP  W  A+P  
Sbjct  71   SLIGTCKLNDVDPESYLRHVLGVIADWPVNRVSELLP--WRIALPAE  115

37) Mmc1_0318 in NC_008576


> AF200692|7|G7|12643209|AAK00461.1|Shigella_flexneri_2a_YSH6000T|-|13858..14205|-|-|unknown
Length=115

 Score = 64.2 bits (224),  Expect = 4e-12, Method: Compositional matrix adjust.
 Identities = 50/110 (46%), Positives = 71/110 (65%), Gaps = 1/110 (0%)

Query  44   KSKLGEAMGYLTNQWSSLIRYLDDGRLEIDNNRAENAIRPFVIGRKNWLFSNSVRGAKAS  103
             S L+ A +Y  NQW++L  Y +DG++EIDNN AENA+R+  +GRKN LF  S +G+  +
Sbjct  7    HSELAKAFAYALNQWPALTYYANDGWVEIDNNIAENALRAVSLGRKNFLFFGSDHGGERG  66

Query  104  ANLYSLIETAKANGWEPFVYLTKVFEGLATAQTVDEFDLLLPWNLKSAAE  153
            A LYSLI T K N+ +P  YL  V+ G+ +   V+    LLPW +  +AE
Sbjct  67   ALLYSLIGTCKLNDVDPESYLRHVL-GVIADWPVNRVSELLPWRIALPAE  115