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PAthogenisity Island DataBase (PAI DB)

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Homologs of pilL gene of AF000001

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) pilL
( NP_458628.1 )

putative exported protein

NC_003198
(Salmonella enterica CT18)

0.0

2) STBHUCCB_44890
( YP_005219911.1 )

hypothetical protein

NC_016832
(Salmonella enterica P-stx-12)

0.0

3) pilL
( YP_002639900.1 )

hypothetical protein

NC_012125
(Salmonella enterica RKS4594)

0.0

4) pilL
( NP_807840.1 )

hypothetical protein

NC_004631
(Salmonella enterica Ty2)

0.0

5) TY21A_21585
( YP_007928479.1 )

hypothetical protein

NC_021176
(Salmonella enterica Ty21a)

0.0

6) ECL_00414
( YP_003610929.1 )

pilus biogenesis protein PilL

NC_014121
(Enterobacter cloacae ATCC 13047)

9e-84

7) EJP617_06800
( YP_005817248.1 )

pilus biogenesis protein

NC_017445
(Erwinia sp. Ejp617)

5e-83

8) Ser39006_1480
( YP_008521862.1 )

Integrating conjugative element protein PilL, PFGI-1

NC_022268
(Serratia sp. ATCC 39006)

5e-82

• Sequence Alignments

1) pilL in NC_012125


> AF000001|7|G4|7274587|AAF14812.2|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty2|+|7045..8289|pilL|-|PilL
Length=414

 Score =  660 bits (2495),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 412/414 (99%), Positives = 412/414 (99%), Gaps = 0/414 (0%)

Query  1    MNTQALFCLSLPLVIAGCAQQTSTQTARDSAFAQSQQPSVFSDIYQRSPEVTRSGRYTLV  60
            MNTQALFCLSLPLVIAGCAQQTSTQTARDSAFAQSQQPSVFSDIYQRSPEVTRSGRYTLV
Sbjct  1    MNTQALFCLSLPLVIAGCAQQTSTQTARDSAFAQSQQPSVFSDIYQRSPEVTRSGRYTLV  60

Query  61   SIKSADAQREPLNQLIDITMPGQLVNSVGDGFRYLLFQSGYSLCGHYGADFSELLNRPLP  120
            SIKSADAQREPLNQLIDITMPGQLVNSVGDGFRYLLFQSGYSLCGHYGADFSELLNRPLP
Sbjct  61   SIKSADAQREPLNQLIDITMPGQLVNSVGDGFRYLLFQSGYSLCGHYGADFSELLNRPLP  120

Query  121  AVQRKIGPMRLSEALQVVAGPAWRMSVDEVNREVCFVLRDAYRVQAKTKALTSVTPAVTG  180
            AVQRKIGPMRLSEALQVVAGPAWRMSVDEVNREVCFVLRDAYRVQAKTKALTSVTPAVTG
Sbjct  121  AVQRKIGPMRLSEALQVVAGPAWRMSVDEVNREVCFVLRDAYRVQAKTKALTSVTPAVTG  180

Query  181  AARTSSPETTRNPYTGVLPGNKAEPVIAGQHLAAKKGTELKPVSQSLPVPALRPGGTPVT  240
            AARTSSPETTRNPYTGVLPGNKAEPVIAGQ LA KKGTELKPVSQSLPVPALRPGGTPVT
Sbjct  181  AARTSSPETTRNPYTGVLPGNKAEPVIAGQYLAVKKGTELKPVSQSLPVPALRPGGTPVT  240

Query  241  SGVSSAPPVKQVSSPAPRNPFTGKNLTGTTLSASHSPAPVGEKAQAKTPSPSTVKAVNPA  300
            SGVSSAPPVKQVSSPAPRNPFTGKNLTGTTLSASHSPAPVGEKAQAKTPSPSTVKAVNPA
Sbjct  241  SGVSSAPPVKQVSSPAPRNPFTGKNLTGTTLSASHSPAPVGEKAQAKTPSPSTVKAVNPA  300

Query  301  TATVLATTTKPLTGTPVAAVASGPEWKAVVGSTLKESLTDWAGRADCPGGGHWVVIWQTP  360
            TATVLATTTKPLTGTPVAAVASGPEWKAVVGSTLKESLTDWAGRADCPGGGHWVVIWQTP
Sbjct  301  TATVLATTTKPLTGTPVAAVASGPEWKAVVGSTLKESLTDWAGRADCPGGGHWVVIWQTP  360

Query  361  TDYRIDAPLVFKGNFETALVQVFDLYKKADKPLFAEASRLQCLVSVADKPADRS  414
            TDYRIDAPLVFKGNFETALVQVFDLYKKADKPLFAEASRLQCLVSVADKPADRS
Sbjct  361  TDYRIDAPLVFKGNFETALVQVFDLYKKADKPLFAEASRLQCLVSVADKPADRS  414

2) pilL in NC_003198


> AF000001|7|G4|7274587|AAF14812.2|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty2|+|7045..8289|pilL|-|PilL
Length=414

 Score =  660 bits (2495),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 412/414 (99%), Positives = 412/414 (99%), Gaps = 0/414 (0%)

Query  1    MNTQALFCLSLPLVIAGCAQQTSTQTARDSAFAQSQQPSVFSDIYQRSPEVTRSGRYTLV  60
            MNTQALFCLSLPLVIAGCAQQTSTQTARDSAFAQSQQPSVFSDIYQRSPEVTRSGRYTLV
Sbjct  1    MNTQALFCLSLPLVIAGCAQQTSTQTARDSAFAQSQQPSVFSDIYQRSPEVTRSGRYTLV  60

Query  61   SIKSADAQREPLNQLIDITMPGQLVNSVGDGFRYLLFQSGYSLCGHYGADFSELLNRPLP  120
            SIKSADAQREPLNQLIDITMPGQLVNSVGDGFRYLLFQSGYSLCGHYGADFSELLNRPLP
Sbjct  61   SIKSADAQREPLNQLIDITMPGQLVNSVGDGFRYLLFQSGYSLCGHYGADFSELLNRPLP  120

Query  121  AVQRKIGPMRLSEALQVVAGPAWRMSVDEVNREVCFVLRDAYRVQAKTKALTSVTPAVTG  180
            AVQRKIGPMRLSEALQVVAGPAWRMSVDEVNREVCFVLRDAYRVQAKTKALTSVTPAVTG
Sbjct  121  AVQRKIGPMRLSEALQVVAGPAWRMSVDEVNREVCFVLRDAYRVQAKTKALTSVTPAVTG  180

Query  181  AARTSSPETTRNPYTGVLPGNKAEPVIAGQHLAAKKGTELKPVSQSLPVPALRPGGTPVT  240
            AARTSSPETTRNPYTGVLPGNKAEPVIAGQ LA KKGTELKPVSQSLPVPALRPGGTPVT
Sbjct  181  AARTSSPETTRNPYTGVLPGNKAEPVIAGQYLAVKKGTELKPVSQSLPVPALRPGGTPVT  240

Query  241  SGVSSAPPVKQVSSPAPRNPFTGKNLTGTTLSASHSPAPVGEKAQAKTPSPSTVKAVNPA  300
            SGVSSAPPVKQVSSPAPRNPFTGKNLTGTTLSASHSPAPVGEKAQAKTPSPSTVKAVNPA
Sbjct  241  SGVSSAPPVKQVSSPAPRNPFTGKNLTGTTLSASHSPAPVGEKAQAKTPSPSTVKAVNPA  300

Query  301  TATVLATTTKPLTGTPVAAVASGPEWKAVVGSTLKESLTDWAGRADCPGGGHWVVIWQTP  360
            TATVLATTTKPLTGTPVAAVASGPEWKAVVGSTLKESLTDWAGRADCPGGGHWVVIWQTP
Sbjct  301  TATVLATTTKPLTGTPVAAVASGPEWKAVVGSTLKESLTDWAGRADCPGGGHWVVIWQTP  360

Query  361  TDYRIDAPLVFKGNFETALVQVFDLYKKADKPLFAEASRLQCLVSVADKPADRS  414
            TDYRIDAPLVFKGNFETALVQVFDLYKKADKPLFAEASRLQCLVSVADKPADRS
Sbjct  361  TDYRIDAPLVFKGNFETALVQVFDLYKKADKPLFAEASRLQCLVSVADKPADRS  414

3) STBHUCCB_44890 in NC_016832


> AF000001|7|G4|7274587|AAF14812.2|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty2|+|7045..8289|pilL|-|PilL
Length=414

 Score =  660 bits (2495),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 412/414 (99%), Positives = 412/414 (99%), Gaps = 0/414 (0%)

Query  1    MNTQALFCLSLPLVIAGCAQQTSTQTARDSAFAQSQQPSVFSDIYQRSPEVTRSGRYTLV  60
            MNTQALFCLSLPLVIAGCAQQTSTQTARDSAFAQSQQPSVFSDIYQRSPEVTRSGRYTLV
Sbjct  1    MNTQALFCLSLPLVIAGCAQQTSTQTARDSAFAQSQQPSVFSDIYQRSPEVTRSGRYTLV  60

Query  61   SIKSADAQREPLNQLIDITMPGQLVNSVGDGFRYLLFQSGYSLCGHYGADFSELLNRPLP  120
            SIKSADAQREPLNQLIDITMPGQLVNSVGDGFRYLLFQSGYSLCGHYGADFSELLNRPLP
Sbjct  61   SIKSADAQREPLNQLIDITMPGQLVNSVGDGFRYLLFQSGYSLCGHYGADFSELLNRPLP  120

Query  121  AVQRKIGPMRLSEALQVVAGPAWRMSVDEVNREVCFVLRDAYRVQAKTKALTSVTPAVTG  180
            AVQRKIGPMRLSEALQVVAGPAWRMSVDEVNREVCFVLRDAYRVQAKTKALTSVTPAVTG
Sbjct  121  AVQRKIGPMRLSEALQVVAGPAWRMSVDEVNREVCFVLRDAYRVQAKTKALTSVTPAVTG  180

Query  181  AARTSSPETTRNPYTGVLPGNKAEPVIAGQHLAAKKGTELKPVSQSLPVPALRPGGTPVT  240
            AARTSSPETTRNPYTGVLPGNKAEPVIAGQ LA KKGTELKPVSQSLPVPALRPGGTPVT
Sbjct  181  AARTSSPETTRNPYTGVLPGNKAEPVIAGQYLAVKKGTELKPVSQSLPVPALRPGGTPVT  240

Query  241  SGVSSAPPVKQVSSPAPRNPFTGKNLTGTTLSASHSPAPVGEKAQAKTPSPSTVKAVNPA  300
            SGVSSAPPVKQVSSPAPRNPFTGKNLTGTTLSASHSPAPVGEKAQAKTPSPSTVKAVNPA
Sbjct  241  SGVSSAPPVKQVSSPAPRNPFTGKNLTGTTLSASHSPAPVGEKAQAKTPSPSTVKAVNPA  300

Query  301  TATVLATTTKPLTGTPVAAVASGPEWKAVVGSTLKESLTDWAGRADCPGGGHWVVIWQTP  360
            TATVLATTTKPLTGTPVAAVASGPEWKAVVGSTLKESLTDWAGRADCPGGGHWVVIWQTP
Sbjct  301  TATVLATTTKPLTGTPVAAVASGPEWKAVVGSTLKESLTDWAGRADCPGGGHWVVIWQTP  360

Query  361  TDYRIDAPLVFKGNFETALVQVFDLYKKADKPLFAEASRLQCLVSVADKPADRS  414
            TDYRIDAPLVFKGNFETALVQVFDLYKKADKPLFAEASRLQCLVSVADKPADRS
Sbjct  361  TDYRIDAPLVFKGNFETALVQVFDLYKKADKPLFAEASRLQCLVSVADKPADRS  414

4) pilL in NC_004631


> AF000001|7|G4|7274587|AAF14812.2|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty2|+|7045..8289|pilL|-|PilL
Length=414

 Score =  660 bits (2495),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 412/414 (99%), Positives = 412/414 (99%), Gaps = 0/414 (0%)

Query  1    MNTQALFCLSLPLVIAGCAQQTSTQTARDSAFAQSQQPSVFSDIYQRSPEVTRSGRYTLV  60
            MNTQALFCLSLPLVIAGCAQQTSTQTARDSAFAQSQQPSVFSDIYQRSPEVTRSGRYTLV
Sbjct  1    MNTQALFCLSLPLVIAGCAQQTSTQTARDSAFAQSQQPSVFSDIYQRSPEVTRSGRYTLV  60

Query  61   SIKSADAQREPLNQLIDITMPGQLVNSVGDGFRYLLFQSGYSLCGHYGADFSELLNRPLP  120
            SIKSADAQREPLNQLIDITMPGQLVNSVGDGFRYLLFQSGYSLCGHYGADFSELLNRPLP
Sbjct  61   SIKSADAQREPLNQLIDITMPGQLVNSVGDGFRYLLFQSGYSLCGHYGADFSELLNRPLP  120

Query  121  AVQRKIGPMRLSEALQVVAGPAWRMSVDEVNREVCFVLRDAYRVQAKTKALTSVTPAVTG  180
            AVQRKIGPMRLSEALQVVAGPAWRMSVDEVNREVCFVLRDAYRVQAKTKALTSVTPAVTG
Sbjct  121  AVQRKIGPMRLSEALQVVAGPAWRMSVDEVNREVCFVLRDAYRVQAKTKALTSVTPAVTG  180

Query  181  AARTSSPETTRNPYTGVLPGNKAEPVIAGQHLAAKKGTELKPVSQSLPVPALRPGGTPVT  240
            AARTSSPETTRNPYTGVLPGNKAEPVIAGQ LA KKGTELKPVSQSLPVPALRPGGTPVT
Sbjct  181  AARTSSPETTRNPYTGVLPGNKAEPVIAGQYLAVKKGTELKPVSQSLPVPALRPGGTPVT  240

Query  241  SGVSSAPPVKQVSSPAPRNPFTGKNLTGTTLSASHSPAPVGEKAQAKTPSPSTVKAVNPA  300
            SGVSSAPPVKQVSSPAPRNPFTGKNLTGTTLSASHSPAPVGEKAQAKTPSPSTVKAVNPA
Sbjct  241  SGVSSAPPVKQVSSPAPRNPFTGKNLTGTTLSASHSPAPVGEKAQAKTPSPSTVKAVNPA  300

Query  301  TATVLATTTKPLTGTPVAAVASGPEWKAVVGSTLKESLTDWAGRADCPGGGHWVVIWQTP  360
            TATVLATTTKPLTGTPVAAVASGPEWKAVVGSTLKESLTDWAGRADCPGGGHWVVIWQTP
Sbjct  301  TATVLATTTKPLTGTPVAAVASGPEWKAVVGSTLKESLTDWAGRADCPGGGHWVVIWQTP  360

Query  361  TDYRIDAPLVFKGNFETALVQVFDLYKKADKPLFAEASRLQCLVSVADKPADRS  414
            TDYRIDAPLVFKGNFETALVQVFDLYKKADKPLFAEASRLQCLVSVADKPADRS
Sbjct  361  TDYRIDAPLVFKGNFETALVQVFDLYKKADKPLFAEASRLQCLVSVADKPADRS  414

5) TY21A_21585 in NC_021176


> AF000001|7|G4|7274587|AAF14812.2|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty2|+|7045..8289|pilL|-|PilL
Length=414

 Score =  658 bits (2489),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 411/414 (99%), Positives = 411/414 (99%), Gaps = 0/414 (0%)

Query  1    MNTQALFCLSLPLVIAGCAQQTSTQTARDSAFAQSQQPSVFSDIYQRSPEVTRSGRYTLV  60
            MNTQALFCLSLPLVIAGCAQQTSTQTARDSAFAQSQQPSVFSDIYQRSPEVTRSGRYTLV
Sbjct  1    MNTQALFCLSLPLVIAGCAQQTSTQTARDSAFAQSQQPSVFSDIYQRSPEVTRSGRYTLV  60

Query  61   SIKSADAQREPLNQLIDITMPGQLVNSVGDGFRYLLFQSGYSLCGHYGADFSELLNRPLP  120
            SIKSADAQREPLNQLIDITMPGQLVNSVGDGFRYLLFQSGYSLCGHYGADFSELLNRPLP
Sbjct  61   SIKSADAQREPLNQLIDITMPGQLVNSVGDGFRYLLFQSGYSLCGHYGADFSELLNRPLP  120

Query  121  AVQRKIGPMRLSEALQVVAGPAWRMSVDEVNREVCFVLRDAYRVQAKTKALTSVTPAVTG  180
            AVQRKIGPMRLSEALQVVAGPAWRMSVDEVNREVCFVLRDAYRVQAKTKALTSVTPAVTG
Sbjct  121  AVQRKIGPMRLSEALQVVAGPAWRMSVDEVNREVCFVLRDAYRVQAKTKALTSVTPAVTG  180

Query  181  AARTSSPETTRNPYTGVLPGNKAEPVIAGQHLAAKKGTELKPVSQSLPVPALRPGGTPVT  240
            AARTSSPETTRNPYTGVLPGNKAEPVIAGQ LA KKGTELKPVSQSLPVPALRPGGTPVT
Sbjct  181  AARTSSPETTRNPYTGVLPGNKAEPVIAGQYLAVKKGTELKPVSQSLPVPALRPGGTPVT  240

Query  241  SGVSSAPPVKQVSSPAPRNPFTGKNLTGTTLSASHSPAPVGKKAQAKTPSPSTVKAVNPA  300
            SGVSSAPPVKQVSSPAPRNPFTGKNLTGTTLSASHSPAPVG KAQAKTPSPSTVKAVNPA
Sbjct  241  SGVSSAPPVKQVSSPAPRNPFTGKNLTGTTLSASHSPAPVGEKAQAKTPSPSTVKAVNPA  300

Query  301  TATVLATTTKPLTGTPVAAVASGPEWKAVVGSTLKESLTDWAGRADCPGGGHWVVIWQTP  360
            TATVLATTTKPLTGTPVAAVASGPEWKAVVGSTLKESLTDWAGRADCPGGGHWVVIWQTP
Sbjct  301  TATVLATTTKPLTGTPVAAVASGPEWKAVVGSTLKESLTDWAGRADCPGGGHWVVIWQTP  360

Query  361  TDYRIDAPLVFKGNFETALVQVFDLYKKADKPLFAEASRLQCLVSVADKPADRS  414
            TDYRIDAPLVFKGNFETALVQVFDLYKKADKPLFAEASRLQCLVSVADKPADRS
Sbjct  361  TDYRIDAPLVFKGNFETALVQVFDLYKKADKPLFAEASRLQCLVSVADKPADRS  414

6) ECL_00414 in NC_014121


> AF000001|7|G4|7274587|AAF14812.2|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty2|+|7045..8289|pilL|-|PilL
Length=414

 Score =  303 bits (1136),  Expect = 9e-84, Method: Compositional matrix adjust.
 Identities = 195/419 (47%), Positives = 283/419 (68%), Gaps = 31/419 (7%)

Query  19   VIQAGCSSAVSDPAP----FANGRYQQPTRFDDIYRNRAPDVVRYDRYTLVSTRPDDAQR  74
            ++ AGC+   S  ++    FA++  QQP+ F DIY+ R+P+V R +RYTLVS ++ DAQR
Sbjct  13   LVIAGCAQQTSTQTARDSAFAQS--QQPSVFSDIYQ-RSPEVTRSGRYTLVSIKSADAQR  69

Query  75   DPLNQIVDITMPAQLVKTVGEGFRYLLLESGYSLCSATTSAFSELLSRPLPAVQRDIGPV  134
            +PLNQ++DITMP+QLV++VG+GFRYLL++SGYSLC+   + FSELL+RPLPAVQR IGP+
Sbjct  70   EPLNQLIDITMPGQLVNSVGDGFRYLLFQSGYSLCGHYGADFSELLNRPLPAVQRKIGPM  129

Query  135  RLSEALQIVAGPAWRLKVDDVNREICFELRDQYRSFAAPLPAPVSLVSQHAPVSLPPVIQ  194
            RLSEALQ+VAGPAWR+ VD+VNRE+CF LRD YR              Q    +L +V  
Sbjct  130  RLSEALQVVAGPAWRMSVDEVNREVCFVLRDAYR-------------VQAKTKALTSVT-  175

Query  195  PARTGGAAGTVNAVPRNPFTGDTSINSTPGTLQKPVLTAQN--------QSVPSPVLTVA  246
            PA TG+A  +     RNP+TG  + N +   +    L+ ++        QS+P P L  +
Sbjct  176  PAVTGAARTSSPETTRNPYTGVLPGNKAEPVIAGQYLAVKKGTELKPVSQSLPVPALRPG  235

Query  247  KTPAAQKSAalspagrppvpppaaapkaaSSQKTPVTAVHPVTVQPATVNAARQTVPVRP  306
             TP +   ++ +P  + + P+P  +  + +   T ++A H+ +  P   +A  +T +   
Sbjct  236  GTPVTSGVSSAPPVKQVSSPAPRNPFTGKNLTGTTLSASHSPA--PVGEKAQAKTPSPST  293

Query  307  VTSLPPAPPVSGQTASSYIPGAPVTPQPVGQTWRAEPGSTLKETLTGWASKATCSNGGNW  366
            V ++ PA +    T++  + G+PV++ + G  W+A  GSTLKE+LT+WA++A C+ GG+W
Sbjct  294  VKAVNPATATVLATTTKPLTGTPVAAVASGPEWKAVVGSTLKESLTDWAGRADCPGGGHW  353

Query  367  VVIWPVSLDYRIDAPLVFHGNFESVLVQVFDLYRKAEKPLFAEANRIQCLISVSDTPTG  425
            VVIW  + DYRIDAPLVF GNFE+ LVQVFDLY+KA+KPLFAEA+R+QCL+SV+D P++
Sbjct  354  VVIWQTPTDYRIDAPLVFKGNFETALVQVFDLYKKADKPLFAEASRLQCLVSVADKPAD  412

7) EJP617_06800 in NC_017445


> AF000001|7|G4|7274587|AAF14812.2|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty2|+|7045..8289|pilL|-|PilL
Length=414

 Score =  301 bits (1126),  Expect = 5e-83, Method: Compositional matrix adjust.
 Identities = 194/405 (48%), Positives = 277/405 (69%), Gaps = 26/405 (6%)

Query  1    MLAGCTNTPSTATPYQPG--RYQQPARFDDIYRNRSPEVVRYDRYTLVSTRPADAQRDPL  58
            ++AGC++  ST T+ +++  + QQP+ F DIY+ RSPEV R +RYTLVS ++ADAQR+PL
Sbjct  14   VIAGCAQQTSTQTARDSAFAQSQQPSVFSDIYQ-RSPEVTRSGRYTLVSIKSADAQREPL  72

Query  59   NQIVDITMPTQLVNTVGEGYRYLLLESGYSLCSATSSAFAELLNRPLPVVQRTIGPVKLS  118
            NQ++DITMP QLVN+VG+G+RYLL++SGYSLC+  ++ F+ELLNRPLP VQR IGP++LS
Sbjct  73   NQLIDITMPGQLVNSVGDGFRYLLFQSGYSLCGHYGADFSELLNRPLPAVQRKIGPMRLS  132

Query  119  EALQIVAGPAWRLRVDEVNREVCFELRDRYRSFAASAVMASAPVKQGSVSLRPNPSSDSQ  178
            EALQ+VAGPAWR+ VDEVNREVCF LRD YR  A +  ++S      + +  ++P +  +
Sbjct  133  EALQVVAGPAWRMSVDEVNREVCFVLRDAYRVQAKTKALTSVTPAVTGAARTSSPETTRN  192

Query  179  PVPASVSVAQTTARNPFTAEVTPAVSTPTQHKAVPTPQSLPVPS----------------  222
            P  + ++  ++   +P  A    AV   T+ K  P +QSLPVP+                
Sbjct  193  PYTGVLPGNKA---EPVIAGQYLAVKKGTELK--PVSQSLPVPALRPGGTPVTSGVSSAP  247

Query  223  PVIYASKPTPLTP--NKTISAMNSAAGTVKTPGTMQAAINTAAGSDIARpatpvttvaaD  280
            PV   S P+P  P   K +++   +A+   +P   +A  +T++ S +     + +TV A 
Sbjct  248  PVKQVSSPAPRNPFTGKNLTGTTLSASHSPAPVGEKAQAKTPSPSTVKAVNPATATVLAT  307

Query  281  NRITSTGTAVTALSVGQSWRAEPGSTLKETLNSWASKASCAHGGSWVVVWPVALDYRIDA  340
                 TGT+V+A++ G  W+A  GSTLKE+L  WA++A C+ GG WVV+W  + DYRIDA
Sbjct  308  TTKPLTGTPVAAVASGPEWKAVVGSTLKESLTDWAGRADCPGGGHWVVIWQTPTDYRIDA  367

Query  341  PLVFHGNFESVLVQVFGLYRQAEKPLFAEANRIQCLLSVSDTPAG  385
            PLVF GNFE+ LVQVF+LY++A+KPLFAEA+R+QCL+SV+D PA+
Sbjct  368  PLVFKGNFETALVQVFDLYKKADKPLFAEASRLQCLVSVADKPAD  412

8) Ser39006_1480 in NC_022268


> AF000001|7|G4|7274587|AAF14812.2|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty2|+|7045..8289|pilL|-|PilL
Length=414

 Score =  297 bits (1114),  Expect = 5e-82, Method: Compositional matrix adjust.
 Identities = 192/407 (48%), Positives = 279/407 (69%), Gaps = 28/407 (6%)

Query  15   LTLSLLTAGCANNGISAA---DALPRISTHPRVSDIYRGRSPEVMRYDRYTLVSTRPADA  71
            L+L+L+ AGCA++  + +    A+++    +  SDIY+ RSPEV R +RYTLVS ++ADA
Sbjct  9    LSLPLVIAGCAQQTSTQTARDSAFAQSQQPSVFSDIYQ-RSPEVTRSGRYTLVSIKSADA  67

Query  72   QRDPLNQMVDITMPAQLVRSVGDGFRYLLLESGYSLCPASSSAFVELLSRPLPAVQRSIG  131
            QR+PLNQ++DITMP+QLV SVGDGFRYLL++SGYSLC   ++ F ELL+RPLPAVQR IG
Sbjct  68   QREPLNQLIDITMPGQLVNSVGDGFRYLLFQSGYSLCGHYGADFSELLNRPLPAVQRKIG  127

Query  132  PVRLSEALQVLAGPAWRLRVDDVNREVCFTLRDAYRDFVPRANTSVAVAPRLSG-----N  186
            P+RLSEALQV+AGPAWR+ VD+VNREVCF LRDAYR   +++++  +V+P ++G     +
Sbjct  128  PMRLSEALQVVAGPAWRMSVDEVNREVCFVLRDAYR-VQAKTKALTSVTPAVTGAARTSS  186

Query  187  PFSASSPIASKVTPSTPPLTVPA---AVQSTSGLTP--ESVPVP------SPVLAAMKRG  235
            P ++ +P ++ +  + +   +++   AV+  + L P  +S+PVP      +PV +++  +
Sbjct  187  PETTRNPYTGVLPGNKAEPVIAGQYLAVKKGTELKPVSQSLPVPALRPGGTPVTSGVSSA  246

Query  236  ANVSNSTIPGTKPTVPVTSAYQMKQAVQPLTKPLVPVIPMKTPGP-----VKNTRTHSSA  290
            + V + + P+ +      +      +      P+      KTP+P     V+ + +   A
Sbjct  247  PPVKQVSSPAPRNPFTGKNLTGTTLSASHSPAPVGEKAQAKTPSPSTVKAVNPATATVLA  306

Query  291  PTGNPVFTPGAPVMAAPSGQRWRAEVGSTLKETLTRWAGVAKCDNGGDWAVIWPVSLDYR  350
             T +P+   G+PV A +SG  W+A VGSTLKE+LT WAG A C  GG+W VIW  + DYR
Sbjct  307  TTTKPL--TGTPVAAVASGPEWKAVVGSTLKESLTDWAGRADCPGGGHWVVIWQTPTDYR  364

Query  351  IDAPLVFHGNFESVLVQIFDLYRQAEKPLYAVASRMQCLVSVSDHPG  397
            IDAPLVF GNFE+ LVQ+FDLY++A+KPL+A ASR+QCLVSV+D P+
Sbjct  365  IDAPLVFKGNFETALVQVFDLYKKADKPLFAEASRLQCLVSVADKPA  411