Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
cag pathogenicity island protein Y |
NC_017382 (Helicobacter pylori 51) |
0.0 |
83 |
|
conjugation TrbI family protein |
NC_017354 (Helicobacter pylori 52) |
0.0 |
85 |
|
cag island protein |
NC_014560 (Helicobacter pylori SJM180) |
0.0 |
80 |
|
hypothetical protein |
NC_021217 (Helicobacter pylori UM037) |
0.0 |
86 |
|
cag pathogenicity island protein (cag7) |
NC_017740 (Helicobacter pylori Shi169) |
0.0 |
86 |
|
cag pathogenicity island protein (cag7) |
NC_017376 (Helicobacter pylori Santal49) |
0.0 |
86 |
|
cag pathogenicity island protein (cag7) |
NC_017372 (Helicobacter pylori India7) |
0.0 |
85 |
|
cag pathogenicity island protein Y VirB10-like protein |
NC_017367 (Helicobacter pylori F57) |
0.0 |
88 |
|
cag island protein |
NC_017368 (Helicobacter pylori F16) |
0.0 |
81 |
|
hypothetical protein |
NC_021218 (Helicobacter pylori UM066) |
0.0 |
87 |
|
cag pathogenicity island protein |
NC_017360 (Helicobacter pylori 35A) |
0.0 |
87 |
|
cag pathogenicity island protein |
NC_017365 (Helicobacter pylori F30) |
0.0 |
86 |
|
cag pathogenicity island protein (cag7, cagY) |
NC_017362 (Helicobacter pylori Lithuania75) |
0.0 |
87 |
|
cag pathogenicity island protein CagY |
NC_010698 (Helicobacter pylori Shi470) |
0.0 |
82 |
|
cag pathogenicity island protein (cag7) |
NC_000915 (Helicobacter pylori 26695) |
0.0 |
85 |
|
cag pathogenicity island protein (cag7) |
NC_018939 (Helicobacter pylori 26695) |
0.0 |
85 |
|
cag pathogenicity island protein (cag7) |
NC_018937 (Helicobacter pylori Rif1) |
0.0 |
85 |
|
cag pathogenicity island protein (cag7) |
NC_018938 (Helicobacter pylori Rif2) |
0.0 |
85 |
|
cag pathogenicity island protein Y VirB10-like protein |
NC_017742 (Helicobacter pylori PeCan18) |
0.0 |
85 |
|
cag pathogenicity island protein (cag7) |
NC_017063 (Helicobacter pylori ELS37) |
0.0 |
79 |
|
hypothetical protein |
NC_021215 (Helicobacter pylori UM032) |
0.0 |
88 |
|
cag pathogenicity island protein Y VirB10-like protein |
NC_011498 (Helicobacter pylori P12) |
0.0 |
80 |
|
cag pathogenicity island protein CagY |
NC_017739 (Helicobacter pylori Shi417) |
0.0 |
83 |
|
cag pathogenicity island protein (cag7) |
NC_017378 (Helicobacter pylori Puno120) |
0.0 |
84 |
|
cag pathogenicity island protein |
NC_020509 (Helicobacter pylori OK310) |
0.0 |
81 |
|
cag pathogenicity island protein |
NC_017355 (Helicobacter pylori v225d) |
0.0 |
80 |
|
cag pathogenicity island protein Y |
NC_008086 (Helicobacter pylori HPAG1) |
0.0 |
82 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='AB120417' AND ph.id_pai_orf='7' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc
11) HMPREF4655_21077 in NC_017360
|
> AB120417|7|G7|46091360|BAD13806.1|Helicobacter_pylori_F17|-|7214..12676|HP0527|-|cag
pathogenicity island protein
Length=1820
Score = 1390 bits (5276), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1226/1414 (87%), Positives = 1300/1414 (92%), Gaps = 57/1414 (4%)
Query 396 NECLKLINDPEIREKFRKELGLQKELQEYKDCIKNAKTEAEKNECLKGLSKEAIER--LK 453
+ECLKLI+D ++++ ++K L+ Y+DCIKNAKTE E+ CL + E + + L+
Sbjct 452 EECLKLIKDKKLQDQ------MKKTLEAYNDCIKNAKTEEERIKCLDLIKDENLKKSLLN 505
Query 454 QQ----ALDCLKNAKTDEERKECLK-----NIPQDLQKELLADMSVKAYKDCVSKARNek 504
QQ ALDCLKNAKTDEER+ECLK +I + ++KEL + ++ YKD
Sbjct 506 QQKVQVALDCLKNAKTDEERNECLKLINDPEIREKFRKELGLQKELQEYKD--------- 556
Query 505 ekkecekLLTPEAKKKLEQQVLDCLKNAKTDEERKKCLKDLPKDLQSDILAKESLKAYKD 564
C+KNAKT+ E++ CLK+L+K+ + L +++L D
Sbjct 557 -----------------------CIKNAKTEAEKNECLKGLSKE-AIERLKQQAL----D 588
Query 565 CVSRARNekekkeceklltpeakklleeeakeSVKAYLDCVSQakteaekkeceklltpe 624
C+ A+ + E+KEC K + + +K L + SVKAY DCVS+A+ E EKKECEKLLTPE
Sbjct 589 CLKNAKTDEERKECLKNIPQDLQKELLADM--SVKAYKDCVSKARNEKEKKECEKLLTPE 646
Query 625 akkk-leeakksvkaYLDCVSQakteaekkeceklltPEAKKLLERQALDCLKNAKTDEE 683
AKK EEAK SVKAYLDCVSQAKTE+EKKECEKLLTPEAKKLLE+QALDCLK+AKT+ E
Sbjct 647 AKKLLEEEAKESVKAYLDCVSQAKTESEKKECEKLLTPEAKKLLEQQALDCLKSAKTEAE 706
Query 684 RKKCLKDLPKDLQKKVLAKESVKAYLDCVSQakteaekkeceklltpeakklleeakesl 743
+K+C+KDLPKDLQKKVLAKESVKAYLDCVSQAKTEAEK+ECEKLLTPEAKKLLEEAKESL
Sbjct 707 KKRCVKDLPKDLQKKVLAKESVKAYLDCVSQAKTEAEKQECEKLLTPEAKKLLEEAKESL 766
Query 744 kaYKDCVSRARNekekkeceklltpeakklleeeakeSVKAYLDCVSQakteaekkecek 803
KAYKDCVSRARNEKEK+ECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEK+ECEK
Sbjct 767 KAYKDCVSRARNEKEKQECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEKQECEK 826
Query 804 lltpeakkkleeakksvkaYLDCVSQakteaekkeceklltPEAKKLLERQALDCLKNAK 863
LLTPEAKK LEEAK S+KAY DCVS+A+ E EK+ECEKLLTPEAKKLLE+QALDCLK+AK
Sbjct 827 LLTPEAKKLLEEAKESLKAYKDCVSRARNEKEKQECEKLLTPEAKKLLEQQALDCLKSAK 886
Query 864 TDEERKRCVKDLPKDLQKKVLAKKSVKAYKDCVSRARNekekkeceklltpeakklleea 923
T+ E+KRCVKDLPKDLQKKVLAK SVKAY DCVS+A+ E EK+ECEKLLTPEAKKLLEEA
Sbjct 887 TEAEKKRCVKDLPKDLQKKVLAKESVKAYLDCVSQAKTEAEKQECEKLLTPEAKKLLEEA 946
Query 924 keslkaYKDCVSRARNekekkeceklltpeakklleeakeslkaYKDCVSRARNEKEKKE 983
KESLKAYKDCVSRARNEKEK+ECEKLLTPEAKKLLEEAKESLKAYKDCVSRARNEKEKKE
Sbjct 947 KESLKAYKDCVSRARNEKEKQECEKLLTPEAKKLLEEAKESLKAYKDCVSRARNEKEKKE 1006
Query 984 CEQLLTPEAKKLLEQQALDCLKNAKTEAEKKRCVKDLPKDLQKKVLAKESVKAYLDCVSR 1043
CE+LLTPEAKKLLEQQALDCLK+AKTEAEKKRCVKDLPKDLQKKVLAKESVKAYLDCVSR
Sbjct 1007 CEKLLTPEAKKLLEQQALDCLKSAKTEAEKKRCVKDLPKDLQKKVLAKESVKAYLDCVSR 1066
Query 1044 ARNEKEKKECEQLLTPeakklleeakeslkaYKDCLSQARNEEERRACEKLLTPEAKKLL 1103
ARNEKEK+ECE+LLTPEAKKLLEEAKESLKAYKDCLSQARNEEERRACEKLLTPEAKKLL
Sbjct 1067 ARNEKEKQECEKLLTPEAKKLLEEAKESLKAYKDCLSQARNEEERRACEKLLTPEAKKLL 1126
Query 1104 EQEVKKSVKAYLDCVSKARNEKEKQECEKLLTPEARKFLAKQVLSCLEKARNEEERKACL 1163
EQEVKKSVKAYLDCVS+ARNEKEKQECEKLLTPEARKFLAKQVL+CLEKARNEEERKACL
Sbjct 1127 EQEVKKSVKAYLDCVSRARNEKEKQECEKLLTPEARKFLAKQVLNCLEKARNEEERKACL 1186
Query 1164 KNIPKDLQKNVLAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLLEQEVKKSVKAYL 1223
KNIPKDLQKNVLAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLLEQEVKKSVKAYL
Sbjct 1187 KNIPKDLQKNVLAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLLEQEVKKSVKAYL 1246
Query 1224 DCVSRARNEKEKQECEKLLTPEARKFLAKELQQKDKAIKDCLKNADPNDRAAIMKCLDGL 1283
DCVSRARNEKEKQECEKLLTPEARKFLAKELQQKDKAIKDCLKNADPNDRAAIMKCLDGL
Sbjct 1247 DCVSRARNEKEKQECEKLLTPEARKFLAKELQQKDKAIKDCLKNADPNDRAAIMKCLDGL 1306
Query 1284 SDEEKLKYLQEAREKAVLDCLKTARTDEEKRKCQNLYSDLIQEIQNKRIQSKQNQLSKTE 1343
SDEEKLKYLQEAREKAVLDCLKTARTDEEKRKCQNLYSDLIQEIQNKR QSKQNQLSKTE
Sbjct 1307 SDEEKLKYLQEAREKAVLDCLKTARTDEEKRKCQNLYSDLIQEIQNKRTQSKQNQLSKTE 1366
Query 1344 RLHQASECLDNLDDPTDQEAIEQCLEGLSDSERALILGIKRQADEVDLIYSDLRNRKTFD 1403
RLHQASECLDNLDDPTDQEAIEQCLEGLSDSERALILGIKRQADEVDLIYSDLRNRKTFD
Sbjct 1367 RLHQASECLDNLDDPTDQEAIEQCLEGLSDSERALILGIKRQADEVDLIYSDLRNRKTFD 1426
Query 1404 NMAAKGYPLLPMDFKNGGDIATINATNVDADKIASDNPIYASIEPDITKQYETEKTIkdk 1463
NMAAKGYPLLPMDFKNGGDIATINATNVDADKIASDNPIYASIEPDITKQYETEKTIKDK
Sbjct 1427 NMAAKGYPLLPMDFKNGGDIATINATNVDADKIASDNPIYASIEPDITKQYETEKTIKDK 1486
Query 1464 nleaklakalggnkkdddkekskksTAEARVESNKIDKDVAETAKNISEIALKNKKEKSG 1523
NLEAKLAKALGGNKKDDDKEKSKKSTAEA+VESNKIDKDVAETAKNISEIALKNKKEK+G
Sbjct 1487 NLEAKLAKALGGNKKDDDKEKSKKSTAEAKVESNKIDKDVAETAKNISEIALKNKKEKNG 1546
Query 1524 EFVDENGNPIDDKKKTETQDETSPVKQAFIGKSDPTFVLAQYTPIEITLTSKVDATLTGI 1583
EFVDENGNPIDDKKKTETQDETSPVKQAFIGKSDPTFVLAQYTPIEITLTSKVDATLTGI
Sbjct 1547 EFVDENGNPIDDKKKTETQDETSPVKQAFIGKSDPTFVLAQYTPIEITLTSKVDATLTGI 1606
Query 1584 VSGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAITPDGVIIPLA 1643
VSGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAITPDGVIIPLA
Sbjct 1607 VSGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAITPDGVIIPLA 1666
Query 1644 NAQAAGMLGEAGVDGYVNNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIGLGKGRSERT 1703
NAQAAGMLGEAGVDGYVNNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIGLGKGRSERT
Sbjct 1667 NAQAAGMLGEAGVDGYVNNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIGLGKGRSERT 1726
Query 1704 PEFNYALGQAINGSMQSSAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDDIDFSGVYDV 1763
PEFNYALGQAINGSMQSSAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDDIDFSGVYDV
Sbjct 1727 PEFNYALGQAINGSMQSSAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDDIDFSGVYDV 1786
Query 1764 KITNKSVVDEIIKQSTKTLSREHEEITTSPKGGN 1797
KITNKSVVDEIIKQSTKTLSREHEEITTSPKGGN
Sbjct 1787 KITNKSVVDEIIKQSTKTLSREHEEITTSPKGGN 1820
Score = 676 bits (2556), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 680/825 (83%), Positives = 707/825 (86%), Gaps = 79/825 (9%)
Query 9 ETSKKTQQHSPQDLSNEEATEANHFedsskeskerseHHLDNPTETKTNFDEYESEETQT 68
ETSKKTQQHSPQDLSNEEATEANHFEDSSKESKE S+HHLDNPTETKTNFDEYESEETQT
Sbjct 139 ETSKKTQQHSPQDLSNEEATEANHFEDSSKESKESSDHHLDNPTETKTNFDEYESEETQT 198
Query 69 QMDsggnetsessngsLADKLFKKARKLVDNKRPFTQQKNLdeeiqepneeddqennGYQ 128
QMDSGGNETSESSNGSLADKLFKKARKLVDNK+PFTQQKNLDEEIQEPNEEDDQENNGYQ
Sbjct 199 QMDSGGNETSESSNGSLADKLFKKARKLVDNKKPFTQQKNLDEEIQEPNEEDDQENNGYQ 258
Query 129 EETQMDLIDDETSKKTQQHSPQDLSNEEATEANHFEDsskeskesseHHLDNPTETKTNF 188
EETQMDLIDDETSKKTQQHSPQDLSNEE+TEANHFEDSSKESKESS+HHLDNPTETKTNF
Sbjct 259 EETQMDLIDDETSKKTQQHSPQDLSNEETTEANHFEDSSKESKESSDHHLDNPTETKTNF 318
Query 189 DEYESEEITNDSNDQEiikgskkkyiiggivvavliviilFSRSIFHYFMPLEDKSSRFS 248
DEYESEEITNDSNDQEIIKGSKKKYIIGGIVVAVLIVIILFSRSIFHYF+PLEDKSSRFS
Sbjct 319 DEYESEEITNDSNDQEIIKGSKKKYIIGGIVVAVLIVIILFSRSIFHYFIPLEDKSSRFS 378
Query 249 KDRNLYVNDEIQIRQEYNRLLKERNEKGNMIDKNLFFNDDPNRTLYNYLNIAEIEDKNPL 308
KDRNLYVNDEIQIRQEYNRLLKERNEKGNMIDKNLFFNDDPNRTLYNYLNIAEIEDKNPL
Sbjct 379 KDRNLYVNDEIQIRQEYNRLLKERNEKGNMIDKNLFFNDDPNRTLYNYLNIAEIEDKNPL 438
Query 309 RDFYECISNGGNYEEClklikdkklqdqmkktlEAYNDCIKNAKTEEERIKCLDLIKDEN 368
R FYECISNGGNYEECLKLIKDKKLQDQMKKTLEAYNDCIKNAKTEEERIKCLDLIKDEN
Sbjct 439 RAFYECISNGGNYEECLKLIKDKKLQDQMKKTLEAYNDCIKNAKTEEERIKCLDLIKDEN 498
Query 369 LKKSLLNQQKVQVALDCLKNAKTDEERNECLKLINDPEIREKFRKELGLQKELQEYKDCI 428
LKKSLLNQQKVQVALDCLKNAKTDEERNECLKLINDPEIREKFRKELGLQKELQEYKDCI
Sbjct 499 LKKSLLNQQKVQVALDCLKNAKTDEERNECLKLINDPEIREKFRKELGLQKELQEYKDCI 558
Query 429 KNAKTEAEKNECLKGLSKEAIERLKQQALDCLKNAKTDEERKECLKNIPQDLQKELLADM 488
KNAKTEAEKNECLKGLSKEAIERLKQQALDCLKNAKTDEERKECLKNIPQDLQKELLADM
Sbjct 559 KNAKTEAEKNECLKGLSKEAIERLKQQALDCLKNAKTDEERKECLKNIPQDLQKELLADM 618
Query 489 SVKAYKDCVSKARNekekkecekLLTPEAKKKL--------------------------- 521
SVKAYKDCVSKARNEKEKKECEKLLTPEAKK L
Sbjct 619 SVKAYKDCVSKARNEKEKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTESEKKEC 678
Query 522 ------------EQQVLDCLKNAKTDEERKKCLKDLPKDLQSDILAKESLKAYKDCVSRA 569
EQQ LDCLK+AKT+ E+K+C+KDLPKDLQ +LAKES+KAY DCVS+A
Sbjct 679 EKLLTPEAKKLLEQQALDCLKSAKTEAEKKRCVKDLPKDLQKKVLAKESVKAYLDCVSQA 738
Query 570 RNekekkeceklltpeakklleeeakeSVKAYLDCVSQakteaekke-ceklltpeakkk 628
+ K+ L K L EEAKES+KAY DCVS+A+ E EK+E L K
Sbjct 739 KT-EAEKQECEKLLTPEAKKLLEEAKESLKAYKDCVSRARNEKEKQECEKLLTPEAKKLL 797
Query 629 leeakksvkaYLDCVSQakteaekkeceklltPEAKKLLE-------------------- 668
EEAK SVKAYLDCVSQAKTEAEK+ECEKLLTPEAKKLLE
Sbjct 798 EEEAKESVKAYLDCVSQAKTEAEKQECEKLLTPEAKKLLEEAKESLKAYKDCVSRARNEK 857
Query 669 ------------------RQALDCLKNAKTDEERKKCLKDLPKDLQKKVLAKESVKAYLD 710
+QALDCLK+AKT+ E+K+C+KDLPKDLQKKVLAKESVKAYLD
Sbjct 858 EKQECEKLLTPEAKKLLEQQALDCLKSAKTEAEKKRCVKDLPKDLQKKVLAKESVKAYLD 917
Query 711 CVSQakteaekkeceklltpeakklleeakeslkaYKDCVSRARN 755
CVSQAKTEAEK+ECEKLLTPEAKKLLEEAKESLKAYKDCVSRARN
Sbjct 918 CVSQAKTEAEKQECEKLLTPEAKKLLEEAKESLKAYKDCVSRARN 962
Score = 192 bits (711), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 190/199 (96%), Positives = 195/199 (98%), Gaps = 0/199 (0%)
Query 1 MNEENDKLETSKKTQQHSPQDLSNEEATEANHFedsskeskerseHHLDNPTETKTNFDE 60
MNEENDK+ETSKKTQQHSPQDLSNEEATEANHFEDSSKESKE S+HHLDNPTETKTNFDE
Sbjct 1 MNEENDKFETSKKTQQHSPQDLSNEEATEANHFEDSSKESKESSDHHLDNPTETKTNFDE 60
Query 61 YESEETQTQMDsggnetsessngsLADKLFKKARKLVDNKRPFTQQKNLdeeiqepneed 120
YESEETQTQMDSGGNETSESSNGSLADKLFKKARKLVDNK+PFTQQKNLDEEIQEPNEED
Sbjct 61 YESEETQTQMDSGGNETSESSNGSLADKLFKKARKLVDNKKPFTQQKNLDEEIQEPNEED 120
Query 121 dqennGYQEETQMDLIDDETSKKTQQHSPQDLSNEEATEANHFEDsskeskesseHHLDN 180
DQENNGYQEETQMDLIDDETSKKTQQHSPQDLSNEEATEANHFEDSSKESKESS+HHLDN
Sbjct 121 DQENNGYQEETQMDLIDDETSKKTQQHSPQDLSNEEATEANHFEDSSKESKESSDHHLDN 180
Query 181 PTETKTNFDEYESEEITND 199
PTETKTNFDEYESEE +
Sbjct 181 PTETKTNFDEYESEETQTQ 199
Score = 186 bits (689), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 208/415 (51%), Positives = 273/415 (66%), Gaps = 52/415 (12%)
Query 343 AYNDCIKNAKTEEERIKCLDLIKDENLKKSLLNQQK------------------------ 378
AY DC+ +AKTE E+ C L+ E K LL++ K
Sbjct 807 AYLDCVSQAKTEAEKQECEKLLTPEA--KKLLEEAKESLKAYKDCVSRARNEKEKQECEK 864
Query 379 ----------VQVALDCLKNAKTDEERNECLKLINDPEIREKFRKELGLQKELQEYKDCI 428
Q ALDCLK+AKT+ E++ C+K ++ ++K + + ++ Y DC+
Sbjct 865 LLTPEAKKLLEQQALDCLKSAKTEAEKKRCVK-----DLPKDLQKKVLAKESVKAYLDCV 919
Query 429 KNAKTEAEKNECLKGLSKEAIERLKQ--QAL----DCLKNAKTDEERKECLKNIPQDLQK 482
+AKTEAEK+EC K L+ EA L + ++L DC+ A+ + E++EC K + + K
Sbjct 920 SQAKTEAEKQECEKLLTPEAKKLLEEAKESLKAYKDCVSRARNEKEKQECEKLLTPE-AK 978
Query 483 ELLADM--SVKAYKDCVSKARNekekkecekLLTPEAKKKLEQQVLDCLKNAKTDEERKK 540
LL + S+KAYKDCVS+ARNEKEKKECEKLLTPEAKK LEQQ LDCLK+AKT+ E+K+
Sbjct 979 KLLEEAKESLKAYKDCVSRARNEKEKKECEKLLTPEAKKLLEQQALDCLKSAKTEAEKKR 1038
Query 541 CLKDLPKDLQSDILAKESLKAYKDCVSRARNekekkeceklltpeakklleeeakeSVKA 600
C+KDLPKDLQ +LAKES+KAY DCVSRARN K+ L K L EEAKES+KA
Sbjct 1039 CVKDLPKDLQKKVLAKESVKAYLDCVSRARN-EKEKQECEKLLTPEAKKLLEEAKESLKA 1097
Query 601 YLDCVSQakteaekke-ceklltpeakkkleeakksvkaYLDCVSQakteaekkecekll 659
Y DC+SQA+ E E++ L K +E KKSVKAYLDCVS+A+ E EK+ECEKLL
Sbjct 1098 YKDCLSQARNEEERRACEKLLTPEAKKLLEQEVKKSVKAYLDCVSRARNEKEKQECEKLL 1157
Query 660 tPEAKKLLERQALDCLKNAKTDEERKKCLKDLPKDLQKKVLAKESVKAYLDCVSQ 714
TPEA+K+L +Q L+CL +A+ +EERK CLK++PKDLQK+VLAKES+KAY DC+SQ
Sbjct 1158 TPEARKFLAKQVLNCLEKARNEEERKACLKNIPKDLQKNVLAKESLKAYKDCLSQ 1212
Score = 125 bits (458), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/240 (45%), Positives = 153/240 (64%), Gaps = 20/240 (8%)
Query 343 AYNDCIKNAKTEEERIKCLDLIKDENLKKSLLNQQKVQVAL--DCLKNAKTDEERNECLK 400
AY DC+ A+ E E+ C L+ E K LL++ K + DCL +A+ +EER C K
Sbjct 1059 AYLDCVSRARNEKEKQECEKLLTPEA--KKLLEEAKESLKAYKDCLSQARNEEERRACEK 1116
Query 401 LINDPEIREKFRKELGLQKELQEYKDCIKNAKTEAEKNECLKGLSKEAIERLKQQALDCL 460
L+ PE + + +E ++K ++ Y DC+ A+ E EK+EC K L+ EA L +Q L+CL
Sbjct 1117 LLT-PEAKKLLEQE--VKKSVKAYLDCVSRARNEKEKQECEKLLTPEARKFLAKQVLNCL 1173
Query 461 KNAKTDEERKECLKNIPQDLQKELLADMSVKAYKDCVSKARNekekkecekLLTPEAKKK 520
+A+ +EERK CLKNIP+DLQK++LA S+KAYKDC+S+ARNE E++ CEKLLTPEA+K
Sbjct 1174 EKARNEEERKACLKNIPKDLQKNVLAKESLKAYKDCLSQARNEEERRACEKLLTPEARKL 1233
Query 521 LEQQV-------LDCLKNAKTDEERKKCLKDLPKD----LQSDILAKESLKAYKDCVSRA 569
LEQ+V LDC+ A+ + E++ C K L + L ++ K+ KA KDC+ A
Sbjct 1234 LEQEVKKSVKAYLDCVSRARNEKEKQECEKLLTPEARKFLAKELQQKD--KAIKDCLKNA 1291
Score = 45.0 bits (151), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/115 (35%), Positives = 69/115 (60%), Gaps = 14/115 (12%)
Query 343 AYNDCIKNAKTEE--ERIKCLD-LIKDENLKKSLLNQQKVQVALDCLKNAKTDEERNECL 399
A +DC+KNA ++ +KCLD L +E+LK L++ + + LDCLK A+TDEE+ C
Sbjct 1283 AIKDCLKNADPNDRAAIMKCLDGLSDEEKLK--YLQEAREKAVLDCLKTARTDEEKRKCQ 1340
Query 400 KLIND--PEIREKF----RKELGLQKELQEYKDCIKN---AKTEAEKNECLKGLS 445
+L +D EI++K +++L+ L++ +C+ N + + ++CL GLS
Sbjct 1341 NLYSDLIQEIQNKRTQSKQNQLSKTERLHQASECLDNLDDPTDQEAIEQCLEGLS 1395 |
14) HPSH_04285 in NC_010698
|
> AB120417|7|G7|46091360|BAD13806.1|Helicobacter_pylori_F17|-|7214..12676|HP0527|-|cag
pathogenicity island protein
Length=1820
Score = 1364 bits (5178), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1158/1414 (82%), Positives = 1231/1414 (88%), Gaps = 126/1414 (8%)
Query 522 NECLKLINDPEIrekfrkelelqkelqeYKDCIKNAKTEAEKNECLKGLSKEAIER--LK 579
+ECLKLI+D ++++ +K LE Y+DCIKNAKTE E+ CL + E + + L+
Sbjct 452 EECLKLIKDKKLQDQMKKTLEA------YNDCIKNAKTEEERIKCLDLIKDENLKKSLLN 505
Query 580 QQ----ALDCLKNAKTDEERKKCLK-----NIPQDLQKELLADMSVKAYKDCVSKARNek 630
QQ ALDCLKNAKTDEER+ CLK +I + ++KEL + ++ YKD
Sbjct 506 QQKVQVALDCLKNAKTDEERNECLKLINDPEIREKFRKELGLQKELQEYKD--------- 556
Query 631 ekkecekLLTPEAKKKLEQQVLDCLKNAKTDEERKKCLKDLPKDLQSDILAKESVKAYKD 690
C+KNAKT+ E++ CLK+L+K+ + L ++++ D
Sbjct 557 -----------------------CIKNAKTEAEKNECLKGLSKE-AIERLKQQAL----D 588
Query 691 CVSQARTEAEKKECeklltpeakklleeeakeSVKAYLDCVSQakteaekkeceklltpe 750
C+ +A+T+ E+KEC K + + +K L + SVKAY DCVS+A+ E EKKECEKLLTPE
Sbjct 589 CLKNAKTDEERKECLKNIPQDLQKELLADM--SVKAYKDCVSKARNEKEKKECEKLLTPE 646
Query 751 akkk-leeakksvkaYLDCVSQakteaekkeceklltPEARKLLEQQALDCLKNAKTEAE 809
AKK EEAK SVKAYLDCVSQAKTE+EKKECEKLLTPEA+KLLEQQALDCLK+AKTEAE
Sbjct 647 AKKLLEEEAKESVKAYLDCVSQAKTESEKKECEKLLTPEAKKLLEQQALDCLKSAKTEAE 706
Query 810 KKRCVKDLPKDLQKKVLAKESVKAYLDCVSQakteaekkeceklltpeakklleeakesl 869
KKRCVKDLPKDLQKKVLAKESVKAYLDCVSQAKTEAEK+ECEKLLTPEAKKLLEEAKESL
Sbjct 707 KKRCVKDLPKDLQKKVLAKESVKAYLDCVSQAKTEAEKQECEKLLTPEAKKLLEEAKESL 766
Query 870 kaYKDCVSQARTEAEKKECeklltpeakklleeeakeSVKAYLDCVSRARNEKEKQECEK 929
KAYKDCVS+AR E EK+ECEKLLTPEAKKLLEEEAKESVKAYLDCVS+A+ E EKQECEK
Sbjct 767 KAYKDCVSRARNEKEKQECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEKQECEK 826
Query 930 LLTPEARKKLEEAKKSVKAYLDCVSQakteaekkeceklltPEAKKLLEQQALDCLKNAK 989
LLTPEA+K LEEAK S+KAY DCVS+A+ E EK+ECEKLLTPEAKKLLEQQALDCLK+AK
Sbjct 827 LLTPEAKKLLEEAKESLKAYKDCVSRARNEKEKQECEKLLTPEAKKLLEQQALDCLKSAK 886
Query 990 TEAEKKRCVKDLPKDLQKKVLAKES----------------------------------- 1014
TEAEKKRCVKDLPKDLQKKVLAKES
Sbjct 887 TEAEKKRCVKDLPKDLQKKVLAKESVKAYLDCVSQAKTEAEKQECEKLLTPEAKKLLEEA 946
Query 1015 ---LKAYKDCVSRARNekekkeceklltpeakklleeakeslkaYKDCVSRARNekekke 1071
LKAYKDCVSRARNEKEK+ECEKLLTPEAKKLLEEAKESLKAYKDCVSRARNEKEKKE
Sbjct 947 KESLKAYKDCVSRARNEKEKQECEKLLTPEAKKLLEEAKESLKAYKDCVSRARNEKEKKE 1006
Query 1072 cekLLTPEARKLLEE-------------------------------AKKSVKAYLDCVSR 1100
CEKLLTPEA+KLLE+ AK SVKAYLDCVSR
Sbjct 1007 CEKLLTPEAKKLLEQQALDCLKSAKTEAEKKRCVKDLPKDLQKKVLAKESVKAYLDCVSR 1066
Query 1101 ARNekekkecekLLTPEARKLLEEAKESLKAYKDCLSQARNEEERKACEKLLTPEARKLL 1160
ARNEKEK+ECEKLLTPEA+KLLEEAKESLKAYKDCLSQARNEEER+ACEKLLTPEA+KLL
Sbjct 1067 ARNEKEKQECEKLLTPEAKKLLEEAKESLKAYKDCLSQARNEEERRACEKLLTPEAKKLL 1126
Query 1161 EQEVKKSVKAYLDCVSRARNEKEKQECEKLLTPEARKFLAKQALSCLEKARNEEERKACL 1220
EQEVKKSVKAYLDCVSRARNEKEKQECEKLLTPEARKFLAKQ L+CLEKARNEEERKACL
Sbjct 1127 EQEVKKSVKAYLDCVSRARNEKEKQECEKLLTPEARKFLAKQVLNCLEKARNEEERKACL 1186
Query 1221 KNIPKDLQKNVLAKESLKAYKDCLSQARNEEERKACEKLLTPEARKLLEQEVKNSVKAYL 1280
KNIPKDLQKNVLAKESLKAYKDCLSQARNEEER+ACEKLLTPEARKLLEQEVK+SVKAYL
Sbjct 1187 KNIPKDLQKNVLAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLLEQEVKKSVKAYL 1246
Query 1281 DCVSRARNEKEKQECEKLLTPEARKFLAKELQQKDKAIKDCLKNADPNDRAAIMKCLDGL 1340
DCVSRARNEKEKQECEKLLTPEARKFLAKELQQKDKAIKDCLKNADPNDRAAIMKCLDGL
Sbjct 1247 DCVSRARNEKEKQECEKLLTPEARKFLAKELQQKDKAIKDCLKNADPNDRAAIMKCLDGL 1306
Query 1341 SDEEKLKYLQEAREKAVLDCLKTAKTDEEKRKCQNLYSDLIQEIQNKRAQSKQNQLSKTE 1400
SDEEKLKYLQEAREKAVLDCLKTA+TDEEKRKCQNLYSDLIQEIQNKR+QSKQNQLSKTE
Sbjct 1307 SDEEKLKYLQEAREKAVLDCLKTARTDEEKRKCQNLYSDLIQEIQNKRTQSKQNQLSKTE 1366
Query 1401 RLHQASECLDNLDDPTDQEAIEQCLEGLSDSERALILGIKRQADEVDLIYSDLRNRKTFD 1460
RLHQASECLDNLDDPTDQEAIEQCLEGLSDSERALILGIKRQADEVDLIYSDLRNRKTFD
Sbjct 1367 RLHQASECLDNLDDPTDQEAIEQCLEGLSDSERALILGIKRQADEVDLIYSDLRNRKTFD 1426
Query 1461 NMAAKGYPLLPMDFKNGGDIATINATNVDADKIASDNPIYASIEPDITKQYETEKTIkdk 1520
NMAAKGYPLLPMDFKNGGDIATINATNVDADKIASDNPIYASIEPDITKQYETEKTIKDK
Sbjct 1427 NMAAKGYPLLPMDFKNGGDIATINATNVDADKIASDNPIYASIEPDITKQYETEKTIKDK 1486
Query 1521 nleaklakalggnkkdddkekskksTAEARVESNKIDKDVAETAKNISEIALKNKKEKSG 1580
NLEAKLAKALGGNKKDDDKEKSKKSTAEA+VESNKIDKDVAETAKNISEIALKNKKEK+G
Sbjct 1487 NLEAKLAKALGGNKKDDDKEKSKKSTAEAKVESNKIDKDVAETAKNISEIALKNKKEKNG 1546
Query 1581 EFVDENGNPIddkkktekqdetSPVKQAFIGKSDPTFVLAQYTPIEITLTSKVDATLTGI 1640
EFVDENGNPIDDKKKTE QDETSPVKQAFIGKSDPTFVLAQYTPIEITLTSKVDATLTGI
Sbjct 1547 EFVDENGNPIDDKKKTETQDETSPVKQAFIGKSDPTFVLAQYTPIEITLTSKVDATLTGI 1606
Query 1641 VSGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAITPDGVIIPLA 1700
VSGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAITPDGVIIPLA
Sbjct 1607 VSGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAITPDGVIIPLA 1666
Query 1701 NAQAAGMLGEAGVDGYVNNHFMKRIGFAVVASVVNSFLQTAPIIALDKLIGLGKGRSERT 1760
NAQAAGMLGEAGVDGYVNNHFMKRIGFAV+ASVVNSFLQTAPIIALDKLIGLGKGRSERT
Sbjct 1667 NAQAAGMLGEAGVDGYVNNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIGLGKGRSERT 1726
Query 1761 PEFNYALGQAINGSMQSSAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDDIDFSGVYDV 1820
PEFNYALGQAINGSMQSSAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDDIDFSGVYDV
Sbjct 1727 PEFNYALGQAINGSMQSSAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDDIDFSGVYDV 1786
Query 1821 KITNKSVVDEIIKQSTKTLSREHEEITTSPKGGN 1854
KITNKSVVDEIIKQSTKTLSREHEEITTSPKGGN
Sbjct 1787 KITNKSVVDEIIKQSTKTLSREHEEITTSPKGGN 1820
Score = 970 bits (3675), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1058/1447 (74%), Positives = 1148/1447 (80%), Gaps = 150/1447 (10%)
Query 1 MNEENDKLETSKKTQQHSPQDLSNEETIKANHFEDsskeskessNHHLDNSTETKTNFDE 60
MNEENDK+ETSKKTQQHSPQDLSNEE+ ANHFEDSSKESKESS+HHLDN+TETKTNFDE
Sbjct 1 MNEENDKFETSKKTQQHSPQDLSNEEATEANHFEDSSKESKESSDHHLDNPTETKTNFDE 60
Query 61 YKSEETQTQMDSGGNETSESSN--LADKLFKKARKLVDNKRPFTQQKNLdeeiqepneed 118
Y SEETQTQMDSGGNETSESSN LADKLFKKARKLVDNK+PFTQQKNLDEEIQEPNEED
Sbjct 61 YESEETQTQMDSGGNETSESSNGSLADKLFKKARKLVDNKKPFTQQKNLDEEIQEPNEED 120
Query 119 dqennGYQEEIQMDLIDDETSKKTQQHSPQDLSNEETIKANHFedsseeskensdHHLDN 178
DQENNGYQEE QMDLIDDETSKKTQQHSPQDLSNEE+ ANHFEDSS ESKE+SDHHLDN
Sbjct 121 DQENNGYQEETQMDLIDDETSKKTQQHSPQDLSNEEATEANHFEDSSKESKESSDHHLDN 180
Query 179 STETKTNFDGEKSEETQTQMDSGGNETSESSN--LADKLFKKARKLVDNKRPFTQQKNLd 236
+TETKTNFD SEETQTQMDSGGNETSESSN LADKLFKKARKLVDNK+PFTQQKNLD
Sbjct 181 PTETKTNFDEYESEETQTQMDSGGNETSESSNGSLADKLFKKARKLVDNKKPFTQQKNLD 240
Query 237 eeiqepneeddqennGYQEEIQMDLIDDETSKKTQQHSPQDLSNEETIKANHFedsskes 296
EEIQEPNEEDDQENNGYQEE QMDLIDDETSKKTQQHSPQDLSNEET ANHFEDSSKES
Sbjct 241 EEIQEPNEEDDQENNGYQEETQMDLIDDETSKKTQQHSPQDLSNEETTEANHFEDSSKES 300
Query 297 kensdHHLDNSTETKTNFDGEKSEEITNDSNDQEiikgskkkyiiggivvavliviilFS 356
KE+SDHHLDN+TETKTNFD SEEITNDSNDQEIIKGSKKKYIIGGIVVAVLIVIILFS
Sbjct 301 KESSDHHLDNPTETKTNFDEYESEEITNDSNDQEIIKGSKKKYIIGGIVVAVLIVIILFS 360
Query 357 RSIFHYFIPLEDKSSRFSKDRNLYVNDEIQIRQEYNRLLKERNEKGNMIDKNLFFNDDPN 416
RSIFHYFIPLEDKSSRFSKDRNLYVNDEIQIRQEYNRLLKERNEKGNMIDKNLFFNDDPN
Sbjct 361 RSIFHYFIPLEDKSSRFSKDRNLYVNDEIQIRQEYNRLLKERNEKGNMIDKNLFFNDDPN 420
Query 417 RTLYNYLNIAEIEDKNPLRAFYECISNGGNYEEClklikdkklqdqmkktlEAYNDCIKN 476
RTLYNYLNIAEIEDKNPLRAFYECISNGGNYEECLKLIKDKKLQDQMKKTLEAYNDCIKN
Sbjct 421 RTLYNYLNIAEIEDKNPLRAFYECISNGGNYEECLKLIKDKKLQDQMKKTLEAYNDCIKN 480
Query 477 AKTEEERIKCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEERNECLKLINDPEIrek 536
AKTEEERIKCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEERNECLKLINDPEIREK
Sbjct 481 AKTEEERIKCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEERNECLKLINDPEIREK 540
Query 537 frkelelqkelqeYKDCIKNAKTEAEKNECLKGLSKEAIERLKQQALDCLKNAKTDEERK 596
FRKEL LQKELQEYKDCIKNAKTEAEKNECLKGLSKEAIERLKQQALDCLKNAKTDEERK
Sbjct 541 FRKELGLQKELQEYKDCIKNAKTEAEKNECLKGLSKEAIERLKQQALDCLKNAKTDEERK 600
Query 597 KCLKNIPQDLQKELLADMSVKAYKDCVSKARNekekkecekLLTPEAKKKL--------- 647
CLKNIPQDLQKELLADMSVKAYKDCVSKARNEKEKKECEKLLTPEAKK L
Sbjct 601 ECLKNIPQDLQKELLADMSVKAYKDCVSKARNEKEKKECEKLLTPEAKKLLEEEAKESVK 660
Query 648 ------------------------------EQQVLDCLKNAKTDEERKKCLKDLPKDLQS 677
EQQ LDCLK+AKT+ E+K+C+KDLPKDLQ
Sbjct 661 AYLDCVSQAKTESEKKECEKLLTPEAKKLLEQQALDCLKSAKTEAEKKRCVKDLPKDLQK 720
Query 678 DILAKESVKAYKDCVSQARTEAEKKECeklltpeakklleeeakeSVKAYLDCVSQakte 737
+LAKESVKAY DCVSQA+TEAEK+EC L K L EEAKES+KAY DCVS+A+ E
Sbjct 721 KVLAKESVKAYLDCVSQAKTEAEKQEC-EKLLTPEAKKLLEEAKESLKAYKDCVSRARNE 779
Query 738 aekke-ceklltpeakkkleeakksvkaYLDCVSQakteaekkeceklltPEARKL---- 792
EK+E L K EEAK SVKAYLDCVSQAKTEAEK+ECEKLLTPEA+KL
Sbjct 780 KEKQECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEKQECEKLLTPEAKKLLEEA 839
Query 793 ----------------------------------LEQQALDCLKNAKTEAEKKRCVKDLP 818
LEQQALDCLK+AKTEAEKKRCVKDLP
Sbjct 840 KESLKAYKDCVSRARNEKEKQECEKLLTPEAKKLLEQQALDCLKSAKTEAEKKRCVKDLP 899
Query 819 KDLQKKVLAKESVKAYLDCVSQakteaekkeceklltpeakklleeakeslkaYKDCVSQ 878
KDLQKKVLAKESVKAYLDCVSQAKTEAEK+ECEKLLTPEAKKLLEEAKESLKAYKDCVS+
Sbjct 900 KDLQKKVLAKESVKAYLDCVSQAKTEAEKQECEKLLTPEAKKLLEEAKESLKAYKDCVSR 959
Query 879 ARTEAEKKECeklltpeakklleeeakeSVKAYLDCVSRARNEKEKQECEKLLTPEARKK 938
AR E EK+EC L K L EEAKES+KAY DCVSRARNEKEK+ECEKLLTPEA+K
Sbjct 960 ARNEKEKQEC-EKLLTPEAKKLLEEAKESLKAYKDCVSRARNEKEKKECEKLLTPEAKKL 1018
Query 939 LEEAKKSVKAYLDCVSQakteaekkeceklltPE-AKKLLEQQA----LDCLKNAKTEAE 993
LE+ LDC+ AKTEAEKK C K L + KK+L +++ LDC+ A+ E E
Sbjct 1019 LEQQA------LDCLKSAKTEAEKKRCVKDLPKDLQKKVLAKESVKAYLDCVSRARNEKE 1072
Query 994 KKRCVKDLPKDLQKKVL--AKESLKAYKDCVSRARNekekke-ceklltpeakklleeak 1050
K+ C K L + KK+L AKESLKAYKDC+S+ARNE E++ L K L +E K
Sbjct 1073 KQECEKLLTPE-AKKLLEEAKESLKAYKDCLSQARNEEERRACEKLLTPEAKKLLEQEVK 1131
Query 1051 eslkaYKDCVSRARNekekkecekLLTPEARKLLEEAKKSVKAYLDCVSRARNekekkec 1110
S+KAY DCVSRARNEKEK+ECEKLLTPEARK+L K L+C+ +ARNE E+K C
Sbjct 1132 KSVKAYLDCVSRARNEKEKQECEKLLTPEARKFL------AKQVLNCLEKARNEEERKAC 1185
Query 1111 ekLLTPE-ARKLLEEAKESLKAYKDCLSQARNEEERKACEKLLTPEARKLLEQEVKKSVK 1169
K + + +++L AKESLKAYKDCLSQARNEEER+ACEKLLTPEARKLLEQEVKKSVK
Sbjct 1186 LKNIPKDLQKNVL--AKESLKAYKDCLSQARNEEERRACEKLLTPEARKLLEQEVKKSVK 1243
Query 1170 AYLDCVSRARNEKEKQECEKLLTPEARKFLAKQ-------ALSCLEKARNEEERKA---C 1219
AYLDCVSRARNEKEKQECEKLLTPEARKFLAK+ CL K + ++R A C
Sbjct 1244 AYLDCVSRARNEKEKQECEKLLTPEARKFLAKELQQKDKAIKDCL-KNADPNDRAAIMKC 1302
Query 1220 LKNIPKDLQKNVLAKESLKAYKDCLSQARNEEERKACEKLLTPEARKLLEQEVKNSVKAY 1279
L ++ + + + L KA DCL AR +EE++ C++L + L QE++N
Sbjct 1303 LDGLSDEEKLKYLQEAREKAVLDCLKTARTDEEKRKCQNLYSD-----LIQEIQN----- 1352
Query 1280 LDCVSRARNEKEKQECEKLLTPEARKFLAKELQQKDKAIKDCLKN-ADPNDRAAIMKCLD 1338
+ + K++Q L+ R L+Q +CL N DP D+ AI +CL+
Sbjct 1353 -----KRTQSKQNQ-----LSKTER------LHQ----ASECLDNLDDPTDQEAIEQCLE 1392
Query 1339 GLSDEEK 1345
GLSD E+
Sbjct 1393 GLSDSER 1399
Score = 96.0 bits (345), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/267 (34%), Positives = 151/267 (57%), Gaps = 32/267 (11%)
Query 1124 EAKESLKAYKDCLSQARNEEERKACEKLLTPEARKLLEQEVKKSVKAYLDCVSRARNEKE 1183
E K++L+A+ +C+S++ N EE C KL+ K L++++KK++ AY DC+ A+ E E
Sbjct 433 EDKNPLRAFYECISNGGNYEE---CLKLIKD---KKLQDQMKKTLEAYNDCIKNAKTEEE 486
Query 1184 KQECEKLLTPEA--RKFLAKQ----ALSCLEKARNEEERKACLK-----NIPKDLQKNVL 1232
+ C L+ E + +L +Q AL CL +A+ +EER+ CLK +I ++K++
Sbjct 487 RIKCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEERNECLKLINDPEIREKFRKELG 546
Query 1233 AKESLKAYKDCLSQARNEEERKACEKLLTPEARKLLEQEVKNSVKAYLDCVSRARNEKEK 1292
+ L+ YKDC+ +A+ E E++ C K L+ EA L Q+ LDC+ A+ + E+
Sbjct 547 LQKELQEYKDCIKNAKTEAEKNECLKGLSKEAIERLKQQA-------LDCLKNAKTDEER 599
Query 1293 QECEKLLTPEARKFLAKELQQKDKAIKDCLKNADPNDRAAIMKCLDGLSDEEKLKYLQEA 1352
+EC K + + +K L ++ K A KDC+ +A + L L+ E K K L+E
Sbjct 600 KECLKNIPQDLQKELLADMSVK--AYKDCVSKARNEKEKKECEKL--LTPEAK-KLLEEE 654
Query 1353 REKAV---LDCLKTAKTDEEKRKCQNL 1376
+V LDC+ AKT+ EK+ C++L
Sbjct 655 AKESVKAYLDCVSQAKTESEKKECEKL 681
Score = 57.1 bits (197), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 73/225 (33%), Positives = 122/225 (55%), Gaps = 37/225 (16%)
Query 469 AYNDCIKNAKTEEERIKCLDLIKDENLKKSLLNQQ---KVQVALDCLKNAKTDEERNECL 525
AY+DC+ +A+ EEER C L+ E + LL+Q+ V+ LDC+ A+ + E++EC
Sbjct 1205 AYKDCLSQARNEEERRACEKLLTPEA--RKLLEQEVKKSVKAYLDCVSRARNEKEKQECE 1262
Query 526 KLINDPEIrekfrkelelqkelqeYKDCIKNAKTE--AEKNECLKGLSKEAIERLK---- 579
KL+ PE R + KEL+ + KDC+KNA + A CL GLS E E+LK
Sbjct 1263 KLLT-PEARKFLAKELQQKDKAI--KDCLKNADPNDRAAIMKCLDGLSDE--EKLKYLQE 1317
Query 580 ---QQALDCLKNAKTDEERKKCLKNIPQDLQKELLADMSVKAYKDCVSKARNekekkece 636
+ LDCLK A+TDEE++KC Q+L +L+ ++ K +++++++
Sbjct 1318 AREKAVLDCLKTARTDEEKRKC-----QNLYSDLIQEIQNKR-----TQSKQNQ------ 1361
Query 637 kLLTPEAKKKLEQQVLDCLKNAKTDEERKKCLKDLPKDLQSDILA 681
L+ + + LD L ++ +E +CL +L+ ++ IL+
Sbjct 1362 --LSKTERLHQASECLDNLDDPTDQEAIEQCLEGLSDSERALILG 1404
Score = 52.6 bits (180), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/163 (34%), Positives = 97/163 (60%), Gaps = 20/163 (12%)
Query 1269 EQEVKNSVKAYLDCVSRARNEKEKQECEKLLTPEARKFLAKELQQKDKAIKDCLKNADPN 1328
E E KN+++A+ +C+S + N +EC KL+ +K L ++++ A +DC+KNA +
Sbjct 431 EIEDKNPLRAFYECISNGGNY---EECLKLIK--DKK-LQDQMKKTLEAYNDCIKNAKTE 484
Query 1329 DRAAIMKCLDGLSDEEKLK--YLQEAREKAVLDCLKTAKTDEEKRKCQNLYSDLIQEIQN 1386
+ +KCLD L +E+LK L++ + + LDCLK AKTDEE+ C +L +D EI++
Sbjct 485 E--ERIKCLD-LIKDENLKKSLLNQQKVQVALDCLKNAKTDEERNECLKLIND--PEIRE 539
Query 1387 KRAQSKQNQLSKTERLHQASECLDNLDDPTDQEAIEQCLEGLS 1429
K +++L+ L++ +C+ N + + ++CL GLS
Sbjct 540 KF----RKELGLQKELQEYKDCIKN---AKTEAEKNECLKGLS 575 |
20) HPELS_03975 in NC_017063
|
> AB120417|7|G7|46091360|BAD13806.1|Helicobacter_pylori_F17|-|7214..12676|HP0527|-|cag
pathogenicity island protein
Length=1820
Score = 1330 bits (5045), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1106/1414 (79%), Positives = 1197/1414 (85%), Gaps = 131/1414 (9%)
Query 528 ECLKLINDPEIrekfrkelelqkelqeYKDCIKNAKTEAEKNECLKGLSKEAIER--LKQ 585
ECLKLI+D ++++ +K LE Y+DCIKNAKTE E+ CL + E + + L+Q
Sbjct 453 ECLKLIKDKKLQDQMKKTLEA------YNDCIKNAKTEEERIKCLDLIKDENLKKSLLNQ 506
Query 586 Q----ALDCLKNAKTDEERNECLK-----NIPQDLQKELLADMSVKAYKDCVSRARNeke 636
Q ALDCLKNAKTDEERNECLK +I + ++KEL + ++ YKD
Sbjct 507 QKVQVALDCLKNAKTDEERNECLKLINDPEIREKFRKELGLQKELQEYKD---------- 556
Query 637 kkecekLLTPEARKKLEQQVLDCLKNAKTDEERKKCLKDLPKDLQSDILAKESVKAYKDC 696
C+KNAKT+ E++ CLK+L+K+ + L ++++ DC
Sbjct 557 ----------------------CIKNAKTEAEKNECLKGLSKE-AIERLKQQAL----DC 589
Query 697 VSQakteaekkeceklltpeakklleeeakeSVKAYLDCVSkakneaekkeceklltpea 756
+ +AKT+ E+KEC K + + +K L + SVKAY DCVSKA+NE EKKECEKLLTPEA
Sbjct 590 LKNAKTDEERKECLKNIPQDLQKELLADM--SVKAYKDCVSKARNEKEKKECEKLLTPEA 647
Query 757 kkk-leeakksvkaYLDCVSQAKTEAEKQECEKLLTPEAKKLLEQQALDCLKNAKTEAEK 815
KK EEAK SVKAYLDCVSQAKTE+EK+ECEKLLTPEAKKLLEQQALDCLK+AKTEAEK
Sbjct 648 KKLLEEEAKESVKAYLDCVSQAKTESEKKECEKLLTPEAKKLLEQQALDCLKSAKTEAEK 707
Query 816 KRCVKDLPKDLQKKVLAKESVRVYLDCVSQAKTEAERKECEKLLTPEARKLLEEAKKSVK 875
KRCVKDLPKDLQKKVLAKESV+ YLDCVSQAKTEAE++ECEKLLTPEA+KLLEEAK S+K
Sbjct 708 KRCVKDLPKDLQKKVLAKESVKAYLDCVSQAKTEAEKQECEKLLTPEAKKLLEEAKESLK 767
Query 876 AYKDCVSRARNekekkecekLLTPEARKLLEE-AKKSVKAYLDCVSQakteaekkecekl 934
AYKDCVSRARNEKEK+ECEKLLTPEA+KLLEE AK SVKAYLDCVSQAKTEAEK+ECEKL
Sbjct 768 AYKDCVSRARNEKEKQECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEKQECEKL 827
Query 935 ltPEARKLLEEAKKSVKLFGLRISGKLSGKKRREIDS--RPEARKLLENQALDCLKNAKT 992
LTPEA+KLLEEAK S+K + +S + K ++E + PEA+KLLE+QALDCLK+AKT
Sbjct 828 LTPEAKKLLEEAKESLKAYKDCVSRARNEKEKQECEKLLTPEAKKLLEQQALDCLKSAKT 887
Query 993 EAEKKRCVKDLPKDLQKKVLAKESVRVYLDCVSkakteaekkeceklltPEARKLLEEAK 1052
EAEKKRCVKDLPKDLQKKVLAKESV+ YLDCVS+AKTEAEK+ECEKLLTPEA+KLLEEAK
Sbjct 888 EAEKKRCVKDLPKDLQKKVLAKESVKAYLDCVSQAKTEAEKQECEKLLTPEAKKLLEEAK 947
Query 1053 ESVKAYKDCVSRARNEKEKQECEKLLTPEAKKLLEQEVKKSVKAYLDCVSRARNekekke 1112
ES+KAYKDCVSRARNEKEKQECEKLLTPEAKKLLE E K S+KAY DCVSRARNEKEKKE
Sbjct 948 ESLKAYKDCVSRARNEKEKQECEKLLTPEAKKLLE-EAKESLKAYKDCVSRARNEKEKKE 1006
Query 1113 cekLLTPEARKFLENQALDCLKNAKTEAEKKRCVKDLPKDLQKKVLAKES---------- 1162
CEKLLTPEA+K+LE+QALDCLK+AKTEAEKKRCVKDLPKDLQKKVLAKES
Sbjct 1007 CEKLLTPEAKKLLEQQALDCLKSAKTEAEKKRCVKDLPKDLQKKVLAKESVKAYLDCVSR 1066
Query 1163 ----------------------------VKAYLDCVSRARNekekke-ceklltpeakkl 1193
+KAY DC+S+ARNE E++ L K L
Sbjct 1067 ARNEKEKQECEKLLTPEAKKLLEEAKESLKAYKDCLSQARNEEERRACEKLLTPEAKKLL 1126
Query 1194 leeakesvkaYLDCVSRARNekekkecekLLTPEARKLLEE------------------- 1234
+E K SVKAYLDCVSRARNEKEK+ECEKLLTPEARK+L
Sbjct 1127 EQEVKKSVKAYLDCVSRARNEKEKQECEKLLTPEARKFLAKQVLNCLEKARNEEERKACL 1186
Query 1235 ------------AKESLKAYKDCLSQARNETERRACEKLLTPEARKLLEQEVKKSVKAYL 1282
AKESLKAYKDCLSQARNE ERRACEKLLTPEARKLLEQEVKKSVKAYL
Sbjct 1187 KNIPKDLQKNVLAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLLEQEVKKSVKAYL 1246
Query 1283 DCVSRARNEKEKQECEKLLTPEARKFLEKELQQKDKAIKDCLKNADPNDRAAIMKCLDGL 1342
DCVSRARNEKEKQECEKLLTPEARKFL KELQQKDKAIKDCLKNADPNDRAAIMKCLDGL
Sbjct 1247 DCVSRARNEKEKQECEKLLTPEARKFLAKELQQKDKAIKDCLKNADPNDRAAIMKCLDGL 1306
Query 1343 SDEEKLKYLQEAREKAVLDCLKTARTDEEKRKCQNLYSDLIQEIqnkkaqnkqnqLSKTE 1402
SDEEKLKYLQEAREKAVLDCLKTARTDEEKRKCQNLYSDLIQEIQNK++Q+KQNQLSKTE
Sbjct 1307 SDEEKLKYLQEAREKAVLDCLKTARTDEEKRKCQNLYSDLIQEIQNKRTQSKQNQLSKTE 1366
Query 1403 RLHQASECLDNLDDPTDQEAIEQCLEGLSDSERALILGIKRQADEVDRIYSDLRSRKTFD 1462
RLHQASECLDNLDDPTDQEAIEQCLEGLSDSERALILGIKRQADEVD IYSDLR+RKTFD
Sbjct 1367 RLHQASECLDNLDDPTDQEAIEQCLEGLSDSERALILGIKRQADEVDLIYSDLRNRKTFD 1426
Query 1463 NMAAKGYPLLPMDFKNGGDIATINATNVDADKIASDNPIYASIEPDITKQYETEKTIkdk 1522
NMAAKGYPLLPMDFKNGGDIATINATNVDADKIASDNPIYASIEPDITKQYETEKTIKDK
Sbjct 1427 NMAAKGYPLLPMDFKNGGDIATINATNVDADKIASDNPIYASIEPDITKQYETEKTIKDK 1486
Query 1523 sleaklakalggdkkdddkekskkPTTETKAESNKIDKDVAETAKNISEIALKNKKEKSG 1582
+LEAKLAKALGG+KKDDDKEKSKK+T+E+K ESNKIDKDVAETAKNISEIALKNKKEK+G
Sbjct 1487 NLEAKLAKALGGNKKDDDKEKSKKSTAEAKVESNKIDKDVAETAKNISEIALKNKKEKNG 1546
Query 1583 DFVDENGNPIddkkkeekqdeTSPVKQAFIGKSDPTFVLAQYTPIEITLTSKVDATLTGI 1642
+FVDENGNPIDDKKK E QDETSPVKQAFIGKSDPTFVLAQYTPIEITLTSKVDATLTGI
Sbjct 1547 EFVDENGNPIDDKKKTETQDETSPVKQAFIGKSDPTFVLAQYTPIEITLTSKVDATLTGI 1606
Query 1643 VSGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAITPDGVIIPLA 1702
VSGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAITPDGVIIPLA
Sbjct 1607 VSGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAITPDGVIIPLA 1666
Query 1703 NAQAAGMLGEAGVDGYVNNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIGLGKGRSERT 1762
NAQAAGMLGEAGVDGYVNNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIGLGKGRSERT
Sbjct 1667 NAQAAGMLGEAGVDGYVNNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIGLGKGRSERT 1726
Query 1763 PEFNYALGQAINGSMQSSAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDDIDFSGVYDV 1822
PEFNYALGQAINGSMQSSAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDDIDFSGVYDV
Sbjct 1727 PEFNYALGQAINGSMQSSAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDDIDFSGVYDV 1786
Query 1823 KITNKSVVDEIIKQSTKTLSREHEEITTSPKGGN 1856
KITNKSVVDEIIKQSTKTLSREHEEITTSPKGGN
Sbjct 1787 KITNKSVVDEIIKQSTKTLSREHEEITTSPKGGN 1820
Score = 1098 bits (4162), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1053/1445 (73%), Positives = 1158/1445 (81%), Gaps = 144/1445 (9%)
Query 1 MNEENDKLETSKKAQQDSPQDLSNEEATEANHFEDPLKEESSD--NHLDNSTETKTQETK 58
MNEENDK+ETSKK+QQ+SPQDLSNEEATEANHFED+ KE +HLDN+TETKT
Sbjct 1 MNEENDKFETSKKTQQHSPQDLSNEEATEANHFEDSSKESKESSDHHLDNPTETKT---- 56
Query 59 THFDEDKLEETQTQMDsggnetsessngsLADKLFKKARKLVDDKRPFTQQKSLDEEAQK 118
+FDE EETQTQMDSGGNETSESSNGSLADKLFKKARKLVD+K+PFTQQK+LDEE Q
Sbjct 57 -NFDEYESEETQTQMDSGGNETSESSNGSLADKLFKKARKLVDNKKPFTQQKNLDEEIQE 115
Query 119 LNKEDDQENNGYQEETQTDLIDDETSKKAQQDSPQDLSNEEATEANHFEDLLKESKESSD 178
N EDDQENNGYQEETQ DLIDDETSKK+QQ+SPQDLSNEEATEANHFED KESKESSD
Sbjct 116 PNEEDDQENNGYQEETQMDLIDDETSKKTQQHSPQDLSNEEATEANHFEDSSKESKESSD 175
Query 179 NHLDNPTETKTHFDKDKLEETQTQIDsggnetsessngsLADKLFKKARKLVDDKRPFTQ 238
+HLDNPTETKT+FD EETQTQ+DSGGNETSESSNGSLADKLFKKARKLVD+K+PFTQ
Sbjct 176 HHLDNPTETKTNFDEYESEETQTQMDSGGNETSESSNGSLADKLFKKARKLVDNKKPFTQ 235
Query 239 QKSLDEEAQKLNKEDDQENNGYQEETQTDLIDDETSKKTQQHSPQDLSNEEATEVNHFED 298
QK+LDEE Q N EDDQENNGYQEETQ DLIDDETSKKTQQHSPQDLSNEE+TE NHFED
Sbjct 236 QKNLDEEIQEPNEEDDQENNGYQEETQMDLIDDETSKKTQQHSPQDLSNEETTEANHFED 295
Query 299 SLKEESSD--NHLDNPTETKTNFDGDKSEEITNDSNDQEiikgskkkyiiggivvavliv 356
S KE +HLDNPTETKTNFD SEEITNDSNDQEIIKGSKKKYIIGGIVVAVLIV
Sbjct 296 SSKESKESSDHHLDNPTETKTNFDEYESEEITNDSNDQEIIKGSKKKYIIGGIVVAVLIV 355
Query 357 iilFSRSIFHYFVPLEDKSSRFSKDRNLYVNDEIQIRQEYNRLLKERNEKGNMIDKNLFF 416
IILFSRSIFHYF+PLEDKSSRFSKDRNLYVNDEIQIRQEYNRLLKERNEKGNMIDKNLFF
Sbjct 356 IILFSRSIFHYFIPLEDKSSRFSKDRNLYVNDEIQIRQEYNRLLKERNEKGNMIDKNLFF 415
Query 417 NDDPNRTLYNYLNIAEIEDKNPLRAFYECISNGGNYEEClklikdkklqdqmkktlEAYN 476
NDDPNRTLYNYLNIAEIEDKNPLRAFYECISNGGNYEECLKLIKDKKLQDQMKKTLEAYN
Sbjct 416 NDDPNRTLYNYLNIAEIEDKNPLRAFYECISNGGNYEECLKLIKDKKLQDQMKKTLEAYN 475
Query 477 DCIKNAKTEEERIKCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEERKECLKLINDP 536
DCIKNAKTEEERIKCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEER+ECLKLINDP
Sbjct 476 DCIKNAKTEEERIKCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEERNECLKLINDP 535
Query 537 EIrekfrkelelqkelqeYKDCIKNAKTEAEKNECLKGLSKEAIERLKQQALDCLKNAKT 596
EIREKFRKEL LQKELQEYKDCIKNAKTEAEKNECLKGLSKEAIERLKQQALDCLKNAKT
Sbjct 536 EIREKFRKELGLQKELQEYKDCIKNAKTEAEKNECLKGLSKEAIERLKQQALDCLKNAKT 595
Query 597 DEERNECLKNIPQDLQKELLADMSVKAYKDCVSRARNekekkecekLLTPEARKKL---- 652
DEER+ECLKNIPQDLQKELLADMSVKAYKDCVS+ARNEKEKKECEKLLTPEA+K L
Sbjct 596 DEERKECLKNIPQDLQKELLADMSVKAYKDCVSKARNEKEKKECEKLLTPEAKKLLEEEA 655
Query 653 -----------------------------------EQQVLDCLKNAKTDEERKKCLKDLP 677
EQQ LDCLK+AKT+ E+K+C+KDLP
Sbjct 656 KESVKAYLDCVSQAKTESEKKECEKLLTPEAKKLLEQQALDCLKSAKTEAEKKRCVKDLP 715
Query 678 KDLQSDILAKESVKAYKDCVSQakteaekkeceklltpeakklleeeakeSVKAYLDCVS 737
KDLQ +LAKESVKAY DCVSQ K+ L K L EEAKES+KAY DCVS
Sbjct 716 KDLQKKVLAKESVKAYLDCVSQ-AKTEAEKQECEKLLTPEAKKLLEEAKESLKAYKDCVS 774
Query 738 kakneaekke-ceklltpeakkkleeakksvkaYLDCVSQAKTEA--------------- 781
+A+NE EK+E L K EEAK SVKAYLDCVSQAKTEA
Sbjct 775 RARNEKEKQECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEKQECEKLLTPEAKK 834
Query 782 -----------------------EKQECEKLLTPEAKKLLEQQALDCLKNAKTEAEKKRC 818
EKQECEKLLTPEAKKLLEQQALDCLK+AKTEAEKKRC
Sbjct 835 LLEEAKESLKAYKDCVSRARNEKEKQECEKLLTPEAKKLLEQQALDCLKSAKTEAEKKRC 894
Query 819 VKDLPKDLQKKVLAKESVRVYLDCVSQAKTEAERKECEKLLTPEARKLLEEAKKSVKAYK 878
VKDLPKDLQKKVLAKESV+ YLDCVSQAKTEAE++ECEKLLTPEA+KLLEEAK S+KAYK
Sbjct 895 VKDLPKDLQKKVLAKESVKAYLDCVSQAKTEAEKQECEKLLTPEAKKLLEEAKESLKAYK 954
Query 879 DCVSRARNekekkecekLLTPEARKLLEEAKKSVKAYLDCVSQakteaekkeceklltPE 938
DCVSRARNEKEK+ECEKLLTPEA+KLLEEAK S+KAY DCVS+A+ E EKKECEKLLTPE
Sbjct 955 DCVSRARNEKEKQECEKLLTPEAKKLLEEAKESLKAYKDCVSRARNEKEKKECEKLLTPE 1014
Query 939 ARKLLEEAKKSVKLFGLRISGKLSGKKRREIDSRPEARKLLENQALDCLKNAKTEAEKKR 998
A+KLLE+ QALDCLK+AKTEAEKKR
Sbjct 1015 AKKLLEQ------------------------------------QALDCLKSAKTEAEKKR 1038
Query 999 CVKDLPKDLQKKVLAKESVRVYLDCVSkakteaekkeceklltPEARKLLEEAKESVKAY 1058
CVKDLPKDLQKKVLAKESV+ YLDCVS+A+ E EK+ECEKLLTPEA+KLLEEAKES+KAY
Sbjct 1039 CVKDLPKDLQKKVLAKESVKAYLDCVSRARNEKEKQECEKLLTPEAKKLLEEAKESLKAY 1098
Query 1059 KDCVSRARNEKEKQECEKLLTPEAKKLLEQEVKKSVKAYLDCVSRARNekekkecekLLT 1118
KDC+S+ARNE E++ CEKLLTPEAKKLLEQEVKKSVKAYLDCVSRARNEKEK+ECEKLLT
Sbjct 1099 KDCLSQARNEEERRACEKLLTPEAKKLLEQEVKKSVKAYLDCVSRARNEKEKQECEKLLT 1158
Query 1119 PEARKFLENQALDCLKNAKTEAEKKRCVKDLPKDLQKKVLAKESVKAYLDCVSRARNeke 1178
PEARKFL +Q L+CL +A+ E E+K C+K++PKDLQK+VLAKES+KAY DC+S+ARNE E
Sbjct 1159 PEARKFLAKQVLNCLEKARNEEERKACLKNIPKDLQKNVLAKESLKAYKDCLSQARNEEE 1218
Query 1179 kke-ceklltpeakklleeakesvkaYLDCVSRARNekekkecekLLTPEARKLLE-EAK 1236
++ L K L +E K SVKAYLDCVSRARNEKEK+ECEKLLTPEARK+L E +
Sbjct 1219 RRACEKLLTPEARKLLEQEVKKSVKAYLDCVSRARNEKEKQECEKLLTPEARKFLAKELQ 1278
Query 1237 ESLKAYKDCLSQARNETERRA---CEKLLTPEAR-KLLEQEVKKSVKAYLDCVSRARNEK 1292
+ KA KDCL +A + +R A C L+ E + K L++ K+V LDC+ AR +
Sbjct 1279 QKDKAIKDCLKNA-DPNDRAAIMKCLDGLSDEEKLKYLQEAREKAV---LDCLKTARTDE 1334
Query 1293 EKQECEKLLTPEARKFLEKELQQKDKAI---------KDCLKN-ADPNDRAAIMKCLDGL 1342
EK+ C++L + + + +K Q K++ + +CL N DP D+ AI +CL+GL
Sbjct 1335 EKRKCQNLYSDLIQEIQNKRTQSKQNQLSKTERLHQASECLDNLDDPTDQEAIEQCLEGL 1394
Query 1343 SDEEK 1347
SD E+
Sbjct 1395 SDSER 1399
Score = 130 bits (476), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 142/341 (42%), Positives = 219/341 (65%), Gaps = 35/341 (10%)
Query 1050 EAKESVKAYKDCVSRARNEKEKQECEKLLTPEAKKLLEQEVKKSVKAYLDCVSRARNeke 1109
E K++++A+ +C+S + N +EC KL+ K L++++KK++ AY DC+ A+ E E
Sbjct 433 EDKNPLRAFYECISNGGNY---EECLKLIK---DKKLQDQMKKTLEAYNDCIKNAKTEEE 486
Query 1110 kkecekLLTPEA--RKFLENQ----ALDCLKNAKTEAEKKRCVK-----DLPKDLQKKVL 1158
+ C L+ E + +L++Q ALDCLKNAKT+ E++ C+K ++ ++K +
Sbjct 487 RIKCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEERNECLKLINDPEIREKFRKELG 546
Query 1159 AKESVKAYLDCVSRARNekekkeceklltpeakklleeakesvkaYLDCVSRARNekekk 1218
+ ++ Y DC+ A+ E EK+EC K L+ EA L + LDC+ A+ + E+K
Sbjct 547 LQKELQEYKDCIKNAKTEAEKNECLKGLSKEAIERLKQQA------LDCLKNAKTDEERK 600
Query 1219 ecekLLTPEARK-LLEEAKESLKAYKDCLSQARNETERRACEKLLTPEARKLLEQEVKKS 1277
EC K + + +K LL + S+KAYKDC+S+ARNE E++ CEKLLTPEA+KLLE+E K S
Sbjct 601 ECLKNIPQDLQKELLADM--SVKAYKDCVSKARNEKEKKECEKLLTPEAKKLLEEEAKES 658
Query 1278 VKAYLDCVSRARNEKEKQECEKLLTPEARKFLEKELQQKDKAIKDCLKNADPNDRAAIMK 1337
VKAYLDCVS+A+ E EK+ECEKLLTPEA+K+LE++ DCLK+A + A +
Sbjct 659 VKAYLDCVSQAKTESEKKECEKLLTPEAKKLLEQQ-------ALDCLKSAKTE--AEKKR 709
Query 1338 CLDGLSDEEKLKYLQEAREKAVLDCLKTARTDEEKRKCQNL 1378
C+ +L+ + + K L KA LDC+ A+T+ EK+ C++L
Sbjct 710 CVKDLPKDLQKKVLAKESVKAYLDCVSQAKTEAEKQECEKL 750
Score = 56.1 bits (193), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/225 (33%), Positives = 120/225 (54%), Gaps = 37/225 (16%)
Query 474 AYNDCIKNAKTEEERIKCLDLIKDENLKKSLLNQQ---KVQVALDCLKNAKTDEERKECL 530
AY+DC+ +A+ EEER C L+ E + LL+Q+ V+ LDC+ A+ + E++EC
Sbjct 1205 AYKDCLSQARNEEERRACEKLLTPEA--RKLLEQEVKKSVKAYLDCVSRARNEKEKQECE 1262
Query 531 KLINDPEIrekfrkelelqkelqeYKDCIKNAKTE--AEKNECLKGLSKEAIERLK---- 584
KL+ PE R + KEL+ + KDC+KNA + A CL GLS E E+LK
Sbjct 1263 KLLT-PEARKFLAKELQQKDKAI--KDCLKNADPNDRAAIMKCLDGLSDE--EKLKYLQE 1317
Query 585 ---QQALDCLKNAKTDEERNECLKNIPQDLQKELLADMSVKAYKDCVSRARNekekkece 641
+ LDCLK A+TDEE+ C Q+L +L+ ++ K R+++ +++
Sbjct 1318 AREKAVLDCLKTARTDEEKRKC-----QNLYSDLIQEIQNK-------RTQSKQNQ---- 1361
Query 642 kLLTPEARKKLEQQVLDCLKNAKTDEERKKCLKDLPKDLQSDILA 686
L+ R + LD L ++ +E +CL +L+ ++ IL+
Sbjct 1362 --LSKTERLHQASECLDNLDDPTDQEAIEQCLEGLSDSERALILG 1404
Score = 48.2 bits (163), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/163 (32%), Positives = 97/163 (60%), Gaps = 20/163 (12%)
Query 1271 EQEVKKSVKAYLDCVSRARNEKEKQECEKLLTPEARKFLEKELQQKDKAIKDCLKNADPN 1330
E E K++++A+ +C+S + N +EC KL+ +K L+ ++++ A +DC+KNA +
Sbjct 431 EIEDKNPLRAFYECISNGGNY---EECLKLIK--DKK-LQDQMKKTLEAYNDCIKNAKTE 484
Query 1331 DRAAIMKCLDGLSDEEKLK--YLQEAREKAVLDCLKTARTDEEKRKCQNLYSDLIQEIqn 1388
+ +KCLD L +E+LK L++ + + LDCLK A+TDEE+ C +L +D EI
Sbjct 485 E--ERIKCLD-LIKDENLKKSLLNQQKVQVALDCLKNAKTDEERNECLKLIND--PEI-- 537
Query 1389 kkaqnkqnqLSKTERLHQASECLDNLDDPTDQEAIEQCLEGLS 1431
++ +++L+ L++ +C+ N + + ++CL GLS
Sbjct 538 --REKFRKELGLQKELQEYKDCIKN---AKTEAEKNECLKGLS 575 |
25) cag7 in NC_020509
|
> AB120417|7|G7|46091360|BAD13806.1|Helicobacter_pylori_F17|-|7214..12676|HP0527|-|cag
pathogenicity island protein
Length=1820
Score = 1295 bits (4915), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1140/1423 (81%), Positives = 1228/1423 (87%), Gaps = 105/1423 (7%)
Query 526 NECLKLINDPEIREKFRKELGLQKELQEYKDCIKNAKTEAEKNECLKGLSKEAIER--LK 583
+ECLKLI+D ++++ ++K L+ Y+DCIKNAKTE E+ CL + E + + L+
Sbjct 452 EECLKLIKDKKLQDQ------MKKTLEAYNDCIKNAKTEEERIKCLDLIKDENLKKSLLN 505
Query 584 QQ----ALDCLKNAKTDEERKECLK-----NIPQDLQKELLADMSVKAYKDCVSKARNek 634
QQ ALDCLKNAKTDEER+ECLK +I + ++KEL + ++ YKD
Sbjct 506 QQKVQVALDCLKNAKTDEERNECLKLINDPEIREKFRKELGLQKELQEYKD--------- 556
Query 635 ekkecekLLTPEAKKKLEQQVLDCLKNAKTDEERKKCLKDLPKDLQSDILAKESLKAYKD 694
C+KNAKT+ E++ CLK+L+K+ + L +++L D
Sbjct 557 -----------------------CIKNAKTEAEKNECLKGLSKE-AIERLKQQAL----D 588
Query 695 CVSQAKTEDEKKECeklltpeakklleeeakeSVKAYLDCVSQakteaekkeceklltpe 754
C+ +AKT++E+KEC K + + +K L + SVKAY DCVS+A+ E EKKECEKLLTPE
Sbjct 589 CLKNAKTDEERKECLKNIPQDLQKELLADM--SVKAYKDCVSKARNEKEKKECEKLLTPE 646
Query 755 akkk-leeakksvkaYLDCVSQakteaekkeceklltPEAKKLLERQALDCLKNAKTDEE 813
AKK EEAK SVKAYLDCVSQAKTE+EKKECEKLLTPEAKKLLE+QALDCLK+AKT+ E
Sbjct 647 AKKLLEEEAKESVKAYLDCVSQAKTESEKKECEKLLTPEAKKLLEQQALDCLKSAKTEAE 706
Query 814 RKKCLKDLPKDLQKKVLA--------------------------------------KESV 835
+K+C+KDLPKDLQKKVLA KES+
Sbjct 707 KKRCVKDLPKDLQKKVLAKESVKAYLDCVSQAKTEAEKQECEKLLTPEAKKLLEEAKESL 766
Query 836 KAYLDCVSQakteaekke-ceklltpeakklleeakeslkaYKDCLSQARNEEERRACEK 894
KAY DCVS+A+ E EK+E L K L EEAKES+KAY DC+SQA+ E E++ CEK
Sbjct 767 KAYKDCVSRARNEKEKQECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEKQECEK 826
Query 895 LLTPEAKKLLEQEVKKSVKAYLDCISKARNEREKQECeklltpeakklleeakeslkaYK 954
LLTPEAKKLLE E K S+KAY DC+S+ARNE+EKQECEKLLTPEAKKLLE+
Sbjct 827 LLTPEAKKLLE-EAKESLKAYKDCVSRARNEKEKQECEKLLTPEAKKLLEQQAL------ 879
Query 955 DCVSRARNekekkeceklltpeakklleeeakeSVKAYLDCVSQakteaekkeceklltp 1014
DC+ A+ E EKK C K L + +K + SVKAYLDCVSQAKTEAEK+ECEKLLTP
Sbjct 880 DCLKSAKTEAEKKRCVKDLPKDLQKKVLAKE--SVKAYLDCVSQAKTEAEKQECEKLLTP 937
Query 1015 eakklleeakksvkaYLDCVSQakteaekkeceklltpeakklleeakksvkaYLDCVSQ 1074
EAKKLLEEAK S+KAY DCVS+A+ E EK+ECEKLLTPEAKKLLEEAK S+KAY DCVS+
Sbjct 938 EAKKLLEEAKESLKAYKDCVSRARNEKEKQECEKLLTPEAKKLLEEAKESLKAYKDCVSR 997
Query 1075 akteaekkeceklltPEAKKLLEQQALDCLKNAKTEAEKKRCVKDIPKDLQKKVLAKESV 1134
A+ E EKKECEKLLTPEAKKLLEQQALDCLK+AKTEAEKKRCVKD+PKDLQKKVLAKESV
Sbjct 998 ARNEKEKKECEKLLTPEAKKLLEQQALDCLKSAKTEAEKKRCVKDLPKDLQKKVLAKESV 1057
Query 1135 KAYLDCVSRARNekekkeceklltpeakklleeakeslkaYKDCLSQARNEEERRACEKL 1194
KAYLDCVSRARNEKEK+ECEKLLTPEAKKLLEEAKESLKAYKDCLSQARNEEERRACEKL
Sbjct 1058 KAYLDCVSRARNEKEKQECEKLLTPEAKKLLEEAKESLKAYKDCLSQARNEEERRACEKL 1117
Query 1195 LTPEAKKLLEQEVKKSVKAYLDCVSKARNEREKQECEKLLTPEARKFLAKQVLSCLEKAR 1254
LTPEAKKLLEQEVKKSVKAYLDCVS+ARNE+EKQECEKLLTPEARKFLAKQVL+CLEKAR
Sbjct 1118 LTPEAKKLLEQEVKKSVKAYLDCVSRARNEKEKQECEKLLTPEARKFLAKQVLNCLEKAR 1177
Query 1255 NEEERKACLKNIPKDLQKNVLAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLLEQE 1314
NEEERKACLKNIPKDLQKNVLAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLLEQE
Sbjct 1178 NEEERKACLKNIPKDLQKNVLAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLLEQE 1237
Query 1315 VKKSVKAYLDCVSKARNEKEKQECEKLLTPEARKFLAKELQQKDKAIKDCLKNADPNDRA 1374
VKKSVKAYLDCVS+ARNEKEKQECEKLLTPEARKFLAKELQQKDKAIKDCLKNADPNDRA
Sbjct 1238 VKKSVKAYLDCVSRARNEKEKQECEKLLTPEARKFLAKELQQKDKAIKDCLKNADPNDRA 1297
Query 1375 AIMKCLDGLSDEEKLKYLQEAREKAVLDCLKTARTDEEKRKCQNLYSDLIQEIQNKRTQS 1434
AIMKCLDGLSDEEKLKYLQEAREKAVLDCLKTARTDEEKRKCQNLYSDLIQEIQNKRTQS
Sbjct 1298 AIMKCLDGLSDEEKLKYLQEAREKAVLDCLKTARTDEEKRKCQNLYSDLIQEIQNKRTQS 1357
Query 1435 KQNQLSKTERLHQASECLDNLDDPTDQEAIEQCLEGLSDSERALILGIKRQADEVDLIYS 1494
KQNQLSKTERLHQASECLDNLDDPTDQEAIEQCLEGLSDSERALILGIKRQADEVDLIYS
Sbjct 1358 KQNQLSKTERLHQASECLDNLDDPTDQEAIEQCLEGLSDSERALILGIKRQADEVDLIYS 1417
Query 1495 DLRNRKTFDNMAAKGYPLLPMDFKNGGDIATINATNVDADKIASDNPIYASIEPDITKQY 1554
DLRNRKTFDNMAAKGYPLLPMDFKNGGDIATINATNVDADKIASDNPIYASIEPDITKQY
Sbjct 1418 DLRNRKTFDNMAAKGYPLLPMDFKNGGDIATINATNVDADKIASDNPIYASIEPDITKQY 1477
Query 1555 ETEKTIKDKNLEAKLANALGGNkkdddkekskkstaeakvesNKIDKDVAETAKNISEIA 1614
ETEKTIKDKNLEAKLA+ALGGNKKDDDKEKSKKSTAEAKVESNKIDKDVAETAKNISEIA
Sbjct 1478 ETEKTIKDKNLEAKLAKALGGNKKDDDKEKSKKSTAEAKVESNKIDKDVAETAKNISEIA 1537
Query 1615 LKNKKEKSGEFVDENGNPIddkkktekqdetSPVKQAFIGKSDPTFVLAQYTPIEITLTS 1674
LKNKKEK+GEFVDENGNPIDDKKKTE QDETSPVKQAFIGKSDPTFVLAQYTPIEITLTS
Sbjct 1538 LKNKKEKNGEFVDENGNPIDDKKKTETQDETSPVKQAFIGKSDPTFVLAQYTPIEITLTS 1597
Query 1675 KVDATLTGIVSGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAIT 1734
KVDATLTGIVSGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAIT
Sbjct 1598 KVDATLTGIVSGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAIT 1657
Query 1735 PDGVIIPLANAQAAGMLGEAGVDGYVNNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIG 1794
PDGVIIPLANAQAAGMLGEAGVDGYVNNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIG
Sbjct 1658 PDGVIIPLANAQAAGMLGEAGVDGYVNNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIG 1717
Query 1795 LGKGRSERTPEFNYALGQAINGSMQSSAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDD 1854
LGKGRSERTPEFNYALGQAINGSMQSSAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDD
Sbjct 1718 LGKGRSERTPEFNYALGQAINGSMQSSAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDD 1777
Query 1855 IDFSGVYDVKITNKSVVDEIIKQSTKTLSREHEEITTSPKGGN 1897
IDFSGVYDVKITNKSVVDEIIKQSTKTLSREHEEITTSPKGGN
Sbjct 1778 IDFSGVYDVKITNKSVVDEIIKQSTKTLSREHEEITTSPKGGN 1820
Score = 848 bits (3211), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 845/1002 (85%), Positives = 882/1002 (89%), Gaps = 80/1002 (7%)
Query 1 MNEENDKFETSKKTQQHSPQDLSNEETTEANRFedsskeskessdHHLDNPTETKTNFDE 60
MNEENDKFETSKKTQQHSPQDLSNEE+TEAN+FEDSSKESKESSDHHLDNPTETKTNFDE
Sbjct 1 MNEENDKFETSKKTQQHSPQDLSNEEATEANHFEDSSKESKESSDHHLDNPTETKTNFDE 60
Query 61 YKSEETQTQMDsegnetsessngsLADKLFKKARKLVDNKRPFTQQKnldeeiqepneed 120
Y SEETQTQMDS GNETSESSNGSLADKLFKKARKLVDNK+PFTQQKNLDEEIQEPNEED
Sbjct 61 YESEETQTQMDSGGNETSESSNGSLADKLFKKARKLVDNKKPFTQQKNLDEEIQEPNEED 120
Query 121 nqennGYQEETQMDLIDDETSKKTQQHSPQDLSNEETTKANRFedsskeskessdHHLDN 180
+QENNGYQEETQMDLIDDETSKKTQQHSPQDLSNEE+T AN+FEDSSKESKESSDHHLDN
Sbjct 121 DQENNGYQEETQMDLIDDETSKKTQQHSPQDLSNEEATEANHFEDSSKESKESSDHHLDN 180
Query 181 PTETKTNFDEYESEETQTQMDsggnetsessngsLADKLFKKARKLVDNKRPFTQQKNLd 240
PTETKTNFDEYESEETQTQMDSGGNETSESSNGSLADKLFKKARKLVDNK+PFTQQKNLD
Sbjct 181 PTETKTNFDEYESEETQTQMDSGGNETSESSNGSLADKLFKKARKLVDNKKPFTQQKNLD 240
Query 241 eeiqepneeddqennGYQEETQMDLIDDETSKKTQQHSPQDLSNEEATEANRFedsskes 300
EEIQEPNEEDDQENNGYQEETQMDLIDDETSKKTQQHSPQDLSNEE+TEAN+FEDSSKES
Sbjct 241 EEIQEPNEEDDQENNGYQEETQMDLIDDETSKKTQQHSPQDLSNEETTEANHFEDSSKES 300
Query 301 kessdHHLDNPTETKTNFDEYESEEITNDSNDQEiikgskkkyiiggivvavliviilFS 360
KESSDHHLDNPTETKTNFDEYESEEITNDSNDQEIIKGSKKKYIIGGIVVAVLIVIILFS
Sbjct 301 KESSDHHLDNPTETKTNFDEYESEEITNDSNDQEIIKGSKKKYIIGGIVVAVLIVIILFS 360
Query 361 RSIFHYFMPLEDKSSRFSKDRNLYVNDEIQIRQEYNRLLKERNEKGNMIDKNLFFNDDPN 420
RSIFHYF+PLEDKSSRFSKDRNLYVNDEIQIRQEYNRLLKERNEKGNMIDKNLFFNDDPN
Sbjct 361 RSIFHYFIPLEDKSSRFSKDRNLYVNDEIQIRQEYNRLLKERNEKGNMIDKNLFFNDDPN 420
Query 421 RTLYNYLNIAEIEDKNPLRAFYECISNGGNYEEClklikdkklqdqmkktlEAYNDCIKN 480
RTLYNYLNIAEIEDKNPLRAFYECISNGGNYEECLKLIKDKKLQDQMKKTLEAYNDCIKN
Sbjct 421 RTLYNYLNIAEIEDKNPLRAFYECISNGGNYEECLKLIKDKKLQDQMKKTLEAYNDCIKN 480
Query 481 AKTEEERIKCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEERNECLKLINDPEIREK 540
AKTEEERIKCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEERNECLKLINDPEIREK
Sbjct 481 AKTEEERIKCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEERNECLKLINDPEIREK 540
Query 541 FRKELGLQKELQEYKDCIKNAKTEAEKNECLKGLSKEAIERLKQQALDCLKNAKTDEERK 600
FRKELGLQKELQEYKDCIKNAKTEAEKNECLKGLSKEAIERLKQQALDCLKNAKTDEERK
Sbjct 541 FRKELGLQKELQEYKDCIKNAKTEAEKNECLKGLSKEAIERLKQQALDCLKNAKTDEERK 600
Query 601 ECLKNIPQDLQKELLADMSVKAYKDCVSKARNekekkecekLLTPEAKKKL--------- 651
ECLKNIPQDLQKELLADMSVKAYKDCVSKARNEKEKKECEKLLTPEAKK L
Sbjct 601 ECLKNIPQDLQKELLADMSVKAYKDCVSKARNEKEKKECEKLLTPEAKKLLEEEAKESVK 660
Query 652 ------------------------------EQQVLDCLKNAKTDEERKKCLKDLPKDLQS 681
EQQ LDCLK+AKT+ E+K+C+KDLPKDLQ
Sbjct 661 AYLDCVSQAKTESEKKECEKLLTPEAKKLLEQQALDCLKSAKTEAEKKRCVKDLPKDLQK 720
Query 682 DILAKESLKAYKDCVSQAKTEDEKKECeklltpeakklleeeakeSVKAYLDCVSQakte 741
+LAKES+KAY DCVSQAKTE EK+EC L K L EEAKES+KAY DCVS+A+ E
Sbjct 721 KVLAKESVKAYLDCVSQAKTEAEKQEC-EKLLTPEAKKLLEEAKESLKAYKDCVSRARNE 779
Query 742 aekke-ceklltpeakkkleeakksvkaYLDCVSQakteaekkeceklltPEAKKL---- 796
EK+E L K EEAK SVKAYLDCVSQAKTEAEK+ECEKLLTPEAKKL
Sbjct 780 KEKQECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEKQECEKLLTPEAKKLLEEA 839
Query 797 ----------------------------------LERQALDCLKNAKTDEERKKCLKDLP 822
LE+QALDCLK+AKT+ E+K+C+KDLP
Sbjct 840 KESLKAYKDCVSRARNEKEKQECEKLLTPEAKKLLEQQALDCLKSAKTEAEKKRCVKDLP 899
Query 823 KDLQKKVLAKESVKAYLDCVSQakteaekkeceklltpeakklleeakeslkaYKDCLSQ 882
KDLQKKVLAKESVKAYLDCVSQAKTEAEK+ECEKLLTPEAKKLLEEAKESLKAYKDC+S+
Sbjct 900 KDLQKKVLAKESVKAYLDCVSQAKTEAEKQECEKLLTPEAKKLLEEAKESLKAYKDCVSR 959
Query 883 ARNEEERRACEKLLTPEAKKLLEQEVKKSVKAYLDCISKARN 924
ARNE E++ CEKLLTPEAKKLLE E K S+KAY DC+S+ARN
Sbjct 960 ARNEKEKQECEKLLTPEAKKLLE-EAKESLKAYKDCVSRARN 1000
Score = 308 bits (1156), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 325/467 (70%), Positives = 387/467 (83%), Gaps = 20/467 (4%)
Query 476 DCIKNAKTEEERIKCL-DLIKDENLKKSLLNQQKVQVALDCLKNAKTDEERNECLKLIND 534
DC+K+AKTE E+ +C+ DL KD L+K +L ++ V+ LDC+ +AKT+ E++EC KL+
Sbjct 696 DCLKSAKTEAEKKRCVKDLPKD--LQKKVLAKESVKAYLDCVSQAKTEAEKQECEKLLT- 752
Query 535 PEIREKFRKELGLQKE-LQEYKDCIKNAKTEAEKNECLKGLSKEAIERLKQQA------- 586
PE + K L KE L+ YKDC+ A+ E EK+EC K L+ EA L ++A
Sbjct 753 PEAK----KLLEEAKESLKAYKDCVSRARNEKEKQECEKLLTPEAKKLLEEEAKESVKAY 808
Query 587 LDCLKNAKTDEERKECLKNIPQDLQKELLADM--SVKAYKDCVSKARNekekkecekLLT 644
LDC+ +AKT+ E++EC K + + K LL + S+KAYKDCVS+ARNEKEK+ECEKLLT
Sbjct 809 LDCVSQAKTEAEKQECEKLLTPE-AKKLLEEAKESLKAYKDCVSRARNEKEKQECEKLLT 867
Query 645 PEAKKKLEQQVLDCLKNAKTDEERKKCLKDLPKDLQSDILAKESLKAYKDCVSQAKTEDE 704
PEAKK LEQQ LDCLK+AKT+ E+K+C+KDLPKDLQ +LAKES+KAY DCVSQAKTE E
Sbjct 868 PEAKKLLEQQALDCLKSAKTEAEKKRCVKDLPKDLQKKVLAKESVKAYLDCVSQAKTEAE 927
Query 705 KKECeklltpeakklleeeakeSVKAYLDCVSQakteaekkeceklltpeakkkleeakk 764
K+ECEKLLTPEAKKLLEE S+KAY DCVS+A+ E EK+ECEKLLTPEAKK LEEAK
Sbjct 928 KQECEKLLTPEAKKLLEEAKE-SLKAYKDCVSRARNEKEKQECEKLLTPEAKKLLEEAKE 986
Query 765 svkaYLDCVSQakteaekkeceklltPEAKKLLERQALDCLKNAKTDEERKKCLKDLPKD 824
S+KAY DCVS+A+ E EKKECEKLLTPEAKKLLE+QALDCLK+AKT+ E+K+C+KDLPKD
Sbjct 987 SLKAYKDCVSRARNEKEKKECEKLLTPEAKKLLEQQALDCLKSAKTEAEKKRCVKDLPKD 1046
Query 825 LQKKVLAKESVKAYLDCVSQakteaekkeceklltpeakklleeakeslkaYKDCLSQAR 884
LQKKVLAKESVKAYLDCVS+A+ E EK+ECEKLLTPEAKKLLEEAKESLKAYKDCLSQAR
Sbjct 1047 LQKKVLAKESVKAYLDCVSRARNEKEKQECEKLLTPEAKKLLEEAKESLKAYKDCLSQAR 1106
Query 885 NEEERRACEKLLTPEAKKLLEQEVKKSVKAYLDCISKARNEREKQEC 931
NEEERRACEKLLTPEAKKLLEQEVKKSVKAYLDC+S+ARNE+EKQEC
Sbjct 1107 NEEERRACEKLLTPEAKKLLEQEVKKSVKAYLDCVSRARNEKEKQEC 1153
Score = 269 bits (1004), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 272/515 (53%), Positives = 359/515 (70%), Gaps = 65/515 (12%)
Query 431 EIEDKNPLRAFYECISNG---GNYEEClklikdkklq--dqmkktlEAYNDCIKNAKTEE 485
E E K++++A+ +C+S++ ++ +EC KL+ + ++ K +L AY+DC+ A+ E
Sbjct 798 EEEAKESVKAYLDCVSQAKTEAEKQECEKLLTPEAKKLLEEAKESLKAYKDCVSRARNEK 857
Query 486 ERIKCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEERNECLKLINDPEIREKFRKEL 545
E+ C L+ E K LL+QQ ALDCLK+AKT+ E++ C+K ++ ++K +
Sbjct 858 EKQECEKLLTPEA--KKLLEQQ----ALDCLKSAKTEAEKKRCVK-----DLPKDLQKKV 906
Query 546 GLQKELQEYKDCIKNAKTEAEKNECLKGLSKEAIERLKQ--QAL----DCLKNAKTDEER 599
+ ++ Y DC+ +AKTEAEK+EC K L+ EA L + ++L DC+ A+ + E+
Sbjct 907 LAKESVKAYLDCVSQAKTEAEKQECEKLLTPEAKKLLEEAKESLKAYKDCVSRARNEKEK 966
Query 600 KECLKNIPQDLQKELLADM--SVKAYKDCVSKARNekekkecekLLTPEAKKKLEQQVLD 657
+EC K + + K LL + S+KAYKDCVS+ARNEKEKKECEKLLTPEAKK LEQQ LD
Sbjct 967 QECEKLLTPE-AKKLLEEAKESLKAYKDCVSRARNEKEKKECEKLLTPEAKKLLEQQALD 1025
Query 658 CLKNAKTDEERKKCLKDLPKDLQSDILAKESLKAYKDCVSQAKTEDEKKECeklltpeak 717
CLK+AKT+ E+K+C+KDLPKDLQ +LAKES+KAY DCVS+A+ E EK+ECEKLLTPEAK
Sbjct 1026 CLKSAKTEAEKKRCVKDLPKDLQKKVLAKESVKAYLDCVSRARNEKEKQECEKLLTPEAK 1085
Query 718 klleeeakeSVKAYLDCVSQakteaekke-ceklltpeakkkleeakksvkaYLDCVSQa 776
KLLEE S+KAY DC+SQA+ E E++ L K +E KKSVKAYLDCVS+A
Sbjct 1086 KLLEEAKE-SLKAYKDCLSQARNEEERRACEKLLTPEAKKLLEQEVKKSVKAYLDCVSRA 1144
Query 777 kteaekkeceklltPEAKKLLERQALDCLKNAKTDEERKKCLKDLPKDLQKKVLAKESVK 836
+ E EK+ECEKLLTPEA+K+L +Q L+CL +A+ +EERK CLK++PKDLQK+VLAKES+K
Sbjct 1145 RNEKEKQECEKLLTPEARKFLAKQVLNCLEKARNEEERKACLKNIPKDLQKNVLAKESLK 1204
Query 837 AYLDCVSQakteaekkeceklltpeakklleeakeslkaYKDCLSQARNEEERRACEKLL 896
A YKDCLSQARNEEERRACEKLL
Sbjct 1205 A--------------------------------------YKDCLSQARNEEERRACEKLL 1226
Query 897 TPEAKKLLEQEVKKSVKAYLDCISKARNEREKQEC 931
TPEA+KLLEQEVKKSVKAYLDC+S+ARNE+EKQEC
Sbjct 1227 TPEARKLLEQEVKKSVKAYLDCVSRARNEKEKQEC 1261
Score = 107 bits (390), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 111/286 (39%), Positives = 159/286 (56%), Gaps = 55/286 (19%)
Query 473 AYNDCIKNAKTEEERIKCLDLIKDENLKKSLLNQQKVQVAL--DCLKNAKTDEERNECLK 530
AY DC+ A+ E E+ C L+ E K LL++ K + DCL +A+ +EER C K
Sbjct 1059 AYLDCVSRARNEKEKQECEKLLTPEA--KKLLEEAKESLKAYKDCLSQARNEEERRACEK 1116
Query 531 LINDPEIREKFRKELGLQKELQEYKDCIKNAKTEAEKNECLKGLSKEAIERLKQQALDCL 590
L+ PE + + +E+ +K ++ Y DC+ A+ E EK+EC K L+ EA L +Q L+CL
Sbjct 1117 LLT-PEAKKLLEQEV--KKSVKAYLDCVSRARNEKEKQECEKLLTPEARKFLAKQVLNCL 1173
Query 591 KNAKTDEERKECLKNIPQDLQKELLADMSVKAYKDC------------------------ 626
+A+ +EERK CLKNIP+DLQK++LA S+KAYKDC
Sbjct 1174 EKARNEEERKACLKNIPKDLQKNVLAKESLKAYKDCLSQARNEEERRACEKLLTPEARKL 1233
Query 627 ---------------VSKARNekekkecekLLTPEAKKKL-------EQQVLDCLKNAKT 664
VS+ARNEKEK+ECEKLLTPEA+K L ++ + DCLKNA
Sbjct 1234 LEQEVKKSVKAYLDCVSRARNEKEKQECEKLLTPEARKFLAKELQQKDKAIKDCLKNADP 1293
Query 665 DE--ERKKCLKDLPKDLQSDILAKESLKAYKDCVSQAKTEDEKKEC 708
++ KCL +L+ + + L KA DC+ A+T++EK+ C
Sbjct 1294 NDRAAIMKCLDGLSDEEKLKYLQEAREKAVLDCLKTARTDEEKRKC 1339
Score = 64.7 bits (226), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/229 (34%), Positives = 123/229 (54%), Gaps = 45/229 (19%)
Query 473 AYNDCIKNAKTEEERIKCLDLIKDENLKKSLLNQQ---KVQVALDCLKNAKTDEERNECL 529
AY+DC+ +A+ EEER C L+ E + LL+Q+ V+ LDC+ A+ + E++EC
Sbjct 1205 AYKDCLSQARNEEERRACEKLLTPEA--RKLLEQEVKKSVKAYLDCVSRARNEKEKQECE 1262
Query 530 KLINDPEIREKFRKELGLQKELQE----YKDCIKNAKTE--AEKNECLKGLSKEAIERLK 583
KL+ PE R KF L KELQ+ KDC+KNA + A CL GLS E E+LK
Sbjct 1263 KLLT-PEAR-KF-----LAKELQQKDKAIKDCLKNADPNDRAAIMKCLDGLSDE--EKLK 1313
Query 584 -------QQALDCLKNAKTDEERKECLKNIPQDLQKELLADMSVKAYKDCVSKARNekek 636
+ LDCLK A+TDEE++ C Q+L +L+ ++ K +++++++
Sbjct 1314 YLQEAREKAVLDCLKTARTDEEKRKC-----QNLYSDLIQEIQNKR-----TQSKQNQ-- 1361
Query 637 kecekLLTPEAKKKLEQQVLDCLKNAKTDEERKKCLKDLPKDLQSDILA 685
L+ + + LD L ++ +E +CL +L+ ++ IL+
Sbjct 1362 ------LSKTERLHQASECLDNLDDPTDQEAIEQCLEGLSDSERALILG 1404
Score = 51.3 bits (175), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/166 (32%), Positives = 99/166 (60%), Gaps = 20/166 (12%)
Query 1309 KLLEQEVKKSVKAYLDCVSKARNEKEKQECEKLLTPEARKFLAKELQQKDKAIKDCLKNA 1368
++ E E K++++A+ +C+S++ N +EC KL+ K L ++++ A +DC+KNA
Sbjct 428 NIAEIEDKNPLRAFYECISNGGNY---EECLKLIKD---KKLQDQMKKTLEAYNDCIKNA 481
Query 1369 DPNDRAAIMKCLDGLSDEEKLK--YLQEAREKAVLDCLKTARTDEEKRKCQNLYSDLIQE 1426
++ +KCLD L +E+LK L++ + + LDCLK A+TDEE+ C +L +D E
Sbjct 482 KTEE--ERIKCLD-LIKDENLKKSLLNQQKVQVALDCLKNAKTDEERNECLKLIND--PE 536
Query 1427 IQNKRTQSKQNQLSKTERLHQASECLDNLDDPTDQEAIEQCLEGLS 1472
I++K +++L+ L++ +C+ N + + ++CL GLS
Sbjct 537 IREKF----RKELGLQKELQEYKDCIKN---AKTEAEKNECLKGLS 575 |
27) HPAG1_0502 in NC_008086
|
> AB120417|7|G7|46091360|BAD13806.1|Helicobacter_pylori_F17|-|7214..12676|HP0527|-|cag
pathogenicity island protein
Length=1820
Score = 1250 bits (4742), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1089/1334 (82%), Positives = 1170/1334 (88%), Gaps = 90/1334 (6%)
Query 3 DLPKDLQKKVLAKKSVKAYLDCVSKARNekekkecekLLTPEARKLLEEAKESLKAYKDC 62
++ ++K + +K ++ Y DC+ +A+ E EK+EC K L+ EA L + ++L DC
Sbjct 536 EIREKFRKELGLQKELQEYKDCIKNAKTEAEKNECLKGLSKEAIERLKQ--QAL----DC 589
Query 63 VSKARNEEERRACeklltpeakklleeeakeSVKAYLDCVSQakteaekkeceklltpea 122
+ +A+ +EER+ C K + + +K L + SVKAY DCVS+A+ E EKKECEKLLTPEA
Sbjct 590 LKNAKTDEERKECLKNIPQDLQKELLADM--SVKAYKDCVSKARNEKEKKECEKLLTPEA 647
Query 123 kkk-leeakksvkaYLDCVSQakneaekkecekLLTPEAKKLLEQQALDCLKNAKTEADK 181
KK EEAK SVKAYLDCVSQAK E+EKKECEKLLTPEAKKLLEQQALDCLK+AKTEA+K
Sbjct 648 KKLLEEEAKESVKAYLDCVSQAKTESEKKECEKLLTPEAKKLLEQQALDCLKSAKTEAEK 707
Query 182 KRCVKDLPKDLQKKVLAKESLKAYKDCVSKARNekekkeceklltpeakklleeeakeSV 241
KRCVKDLPKDLQKKVLAKES V
Sbjct 708 KRCVKDLPKDLQKKVLAKES---------------------------------------V 728
Query 242 KAYLDCVSQakneaekkeceklltpeakkkleeakksvkaYLDCVSQakneaekkecekL 301
KAYLDCVSQAK EAEK+ECEKLLTPEAKK LEEAK S+KAY DCVS+A+NE EK+ECEKL
Sbjct 729 KAYLDCVSQAKTEAEKQECEKLLTPEAKKLLEEAKESLKAYKDCVSRARNEKEKQECEKL 788
Query 302 LTPEAKKLLEQQA-------LDCLKNAKTDEERKKCLKDLPKDLQKKVL--AKKSVKAYL 352
LTPEAKKLLE++A LDC+ +AKT+ E++ C K L + KK+L AK S+KAY
Sbjct 789 LTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEKQECEKLLTPE-AKKLLEEAKESLKAYK 847
Query 353 DCVSKARNekekkecekLLTPEARKLLEE------------------------------- 381
DCVS+ARNEKEK+ECEKLLTPEA+KLLE+
Sbjct 848 DCVSRARNEKEKQECEKLLTPEAKKLLEQQALDCLKSAKTEAEKKRCVKDLPKDLQKKVL 907
Query 382 AKESLKAYKDCVSKARNEEERRACeklltpeakklleeeakeSVKAYLDCVSQakteaek 441
AKES+KAY DCVS+A+ E E++ CEKLLTPEAKKLLEE S+KAY DCVS+A+ E EK
Sbjct 908 AKESVKAYLDCVSQAKTEAEKQECEKLLTPEAKKLLEEAKE-SLKAYKDCVSRARNEKEK 966
Query 442 keceklltpeakkkleeakksvkaYLDCVSQAKTEADKKECEKLLTPEAKKLLEQQALDC 501
+ECEKLLTPEAKK LEEAK S+KAY DCVS+A+ E +KKECEKLLTPEAKKLLEQQALDC
Sbjct 967 QECEKLLTPEAKKLLEEAKESLKAYKDCVSRARNEKEKKECEKLLTPEAKKLLEQQALDC 1026
Query 502 LKNAKTEADKKRCVKDLPKDLQKKVLAKKSVKAYLDCVSKARNekekkecekLLTPEARK 561
LK+AKTEA+KKRCVKDLPKDLQKKVLAK SVKAYLDCVS+ARNEKEK+ECEKLLTPEA+K
Sbjct 1027 LKSAKTEAEKKRCVKDLPKDLQKKVLAKESVKAYLDCVSRARNEKEKQECEKLLTPEAKK 1086
Query 562 LLEEAKESLKAYKDCVSKARNekekkecekLLTPEARKLLEQEVKKSVKAYLDCVSRARN 621
LLEEAKESLKAYKDC+S+ARNE E++ CEKLLTPEA+KLLEQEVKKSVKAYLDCVSRARN
Sbjct 1087 LLEEAKESLKAYKDCLSQARNEEERRACEKLLTPEAKKLLEQEVKKSVKAYLDCVSRARN 1146
Query 622 ekekkecekLLTPEARKFLAKQVLNCLEKAGNEEERKACLKNLPKDLQENVLAKESLKAY 681
EKEK+ECEKLLTPEARKFLAKQVLNCLEKA NEEERKACLKN+PKDLQ NVLAKESLKAY
Sbjct 1147 EKEKQECEKLLTPEARKFLAKQVLNCLEKARNEEERKACLKNIPKDLQKNVLAKESLKAY 1206
Query 682 KDCLSQARNEEERRACEKLLTPEARKLLEQEVKKSVKAYLDCVSKARNekekkecekLLT 741
KDCLSQARNEEERRACEKLLTPEARKLLEQEVKKSVKAYLDCVS+ARNEKEK+ECEKLLT
Sbjct 1207 KDCLSQARNEEERRACEKLLTPEARKLLEQEVKKSVKAYLDCVSRARNEKEKQECEKLLT 1266
Query 742 PEARKFLAKELQQKDKAIKDCLKNADPNDRAAIMKCLDGLSDEEKLKYLQEAREKAVLDC 801
PEARKFLAKELQQKDKAIKDCLKNADPNDRAAIMKCLDGLSDEEKLKYLQEAREKAVLDC
Sbjct 1267 PEARKFLAKELQQKDKAIKDCLKNADPNDRAAIMKCLDGLSDEEKLKYLQEAREKAVLDC 1326
Query 802 LKTARTDEEKRKCQNLYSDLIQEIQNKRTQNKQNQLSKTERLHQASECLDNLDDPTDQEA 861
LKTARTDEEKRKCQNLYSDLIQEIQNKRTQ+KQNQLSKTERLHQASECLDNLDDPTDQEA
Sbjct 1327 LKTARTDEEKRKCQNLYSDLIQEIQNKRTQSKQNQLSKTERLHQASECLDNLDDPTDQEA 1386
Query 862 IEQCLEGLSDSERALILGIKRQADEVDLIYSELRNRKTFDNMAAKGYPLLPMDFKNGGDI 921
IEQCLEGLSDSERALILGIKRQADEVDLIYS+LRNRKTFDNMAAKGYPLLPMDFKNGGDI
Sbjct 1387 IEQCLEGLSDSERALILGIKRQADEVDLIYSDLRNRKTFDNMAAKGYPLLPMDFKNGGDI 1446
Query 922 ATINATNVDADKIASDNPIYASIEPDITKQYETEKTIKDKNLEAKLAKALGsnkkdddke 981
ATINATNVDADKIASDNPIYASIEPDITKQYETEKTIKDKNLEAKLAKALG+NKKDDDKE
Sbjct 1447 ATINATNVDADKIASDNPIYASIEPDITKQYETEKTIKDKNLEAKLAKALGGNKKDDDKE 1506
Query 982 kskkstaeskvesNKIDKDVAETAKNISEIALKNKKEKNGEFVDENGNPIDDKKKAEKQD 1041
KSKKSTAE+KVESNKIDKDVAETAKNISEIALKNKKEKNGEFVDENGNPIDDKKK+E QD
Sbjct 1507 KSKKSTAEAKVESNKIDKDVAETAKNISEIALKNKKEKNGEFVDENGNPIDDKKKTETQD 1566
Query 1042 ETSPVKQAFIGKSDPTFVLAQYTPIEITLTSKVDATLTGIVSGVVAKDVWNMNGTMILLD 1101
ETSPVKQAFIGKSDPTFVLAQYTPIEITLTSKVDATLTGIVSGVVAKDVWNMNGTMILLD
Sbjct 1567 ETSPVKQAFIGKSDPTFVLAQYTPIEITLTSKVDATLTGIVSGVVAKDVWNMNGTMILLD 1626
Query 1102 KGTKVYGNYQSVKGGTPIMTRLMIVFTKAITPDGVIIPLANAQAAGMLGEAGVDGYVNNH 1161
KGTKVYGNYQSVKGGTPIMTRLMIVFTKAITPDGVIIPLANAQAAGMLGEAGVDGYVNNH
Sbjct 1627 KGTKVYGNYQSVKGGTPIMTRLMIVFTKAITPDGVIIPLANAQAAGMLGEAGVDGYVNNH 1686
Query 1162 FMKRIGFAVIASVVNSFLQTAPIIALDKLIGLGKGRSERTPEFNYALGQAINGSMQSSAQ 1221
FMKRIGFAVIASVVNSFLQTAPIIALDKLIGLGKGRSERTPEFNYALGQAINGSMQSSAQ
Sbjct 1687 FMKRIGFAVIASVVNSFLQTAPIIALDKLIGLGKGRSERTPEFNYALGQAINGSMQSSAQ 1746
Query 1222 MSNQILGQLMNIPPSFYKNEGDSIKILTMDDIDFSGVYDVKITNKSVVDEIIKQSTKTLS 1281
MSNQILGQLMNIPPSFYKNEGDSIKILTMDDIDFSGVYDVKITNKSVVDEIIKQSTKTLS
Sbjct 1747 MSNQILGQLMNIPPSFYKNEGDSIKILTMDDIDFSGVYDVKITNKSVVDEIIKQSTKTLS 1806
Query 1282 REHEEITTSPKGGN 1295
REHEEITTSPKGGN
Sbjct 1807 REHEEITTSPKGGN 1820
Score = 413 bits (1553), Expect = 4e-116, Method: Compositional matrix adjust.
Identities = 498/788 (64%), Positives = 593/788 (76%), Gaps = 101/788 (12%)
Query 1 MKDLPKDLQKKVLAKKSVKAYLDCVSKARNekekkecekLLTPEARKLLEEAKESLKAYK 60
+KDLPKDLQKKVLAK SVKAYLDCVS+A+ E EK+ECEKLLTPEA+KLLEEAKESLKAYK
Sbjct 711 VKDLPKDLQKKVLAKESVKAYLDCVSQAKTEAEKQECEKLLTPEAKKLLEEAKESLKAYK 770
Query 61 DCVSKARNEEERRACeklltpeakklleeeakeSVKAYLDCVSQakteaekkeceklltp 120
DCVS+ARNE E++ CEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEK+ECEKLLTP
Sbjct 771 DCVSRARNEKEKQECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEKQECEKLLTP 830
Query 121 eakkkleeakksvkaYLDCVSQakneaekkecekLLTPEAKKLLEQQALDCLKNAKTEAD 180
EAKK LEEAK S+KAY DCVS+A+NE EK+ECEKLLTPEAKKLLEQQALDCLK+AKTEA+
Sbjct 831 EAKKLLEEAKESLKAYKDCVSRARNEKEKQECEKLLTPEAKKLLEQQALDCLKSAKTEAE 890
Query 181 KKRCVKDLPKDLQKKVLAKESLKAYKDCVSKARNekekkeceklltpeakklleeeakeS 240
KKRCVKDLPKDLQKKVLAKES+KAY DCVS+A+ K+ L K L EEAKES
Sbjct 891 KKRCVKDLPKDLQKKVLAKESVKAYLDCVSQAKT-EAEKQECEKLLTPEAKKLLEEAKES 949
Query 241 VKAYLDCVSQakneaekkeceklltpeakkkleeakksvkaYLDCVSQakneaekkecek 300
+KAY DCVS+A+NE EK+ECEKLLTPEAKK LEEAK S+KAY DCVS+A+NE EKKECEK
Sbjct 950 LKAYKDCVSRARNEKEKQECEKLLTPEAKKLLEEAKESLKAYKDCVSRARNEKEKKECEK 1009
Query 301 LLTPEAKKLLEQQALDCLKNAKTDEERKKCLKDLPKDLQKKVLAKKSVKAYLDCVSKARN 360
LLTPEAKKLLEQQALDCLK+AKT+ E+K+C+KDLPKDLQKKVLAK SVKAYLDCVS+ARN
Sbjct 1010 LLTPEAKKLLEQQALDCLKSAKTEAEKKRCVKDLPKDLQKKVLAKESVKAYLDCVSRARN 1069
Query 361 ekekkecekLLTPEARKLLEEAKESLKAYKDCVSKARNEEERRACeklltpeakklleee 420
EKEK+ECEKLLTPEA+KLLEEAKESLKAYKDC+S+ARNEEERRACEKLLTPEAKKLLE+E
Sbjct 1070 EKEKQECEKLLTPEAKKLLEEAKESLKAYKDCLSQARNEEERRACEKLLTPEAKKLLEQE 1129
Query 421 akeSVKAYLDCVSQakteaekkeceklltpeakkkleeakksvkaYLDCVSQAKTEADKK 480
K SVKAYLDCV S+A+ E +K+
Sbjct 1130 VKKSVKAYLDCV--------------------------------------SRARNEKEKQ 1151
Query 481 ECEKLLTPEAKKLLEQQALDCLKNAKTEADKKRCVKDLPKDLQKKVLAKKSVKAYLDCVS 540
ECEKLLTPEA+K+L +Q L+CL +A+ E ++K C+K++PKDLQK+VLAK S+KAY DC+S
Sbjct 1152 ECEKLLTPEARKFLAKQVLNCLEKARNEEERKACLKNIPKDLQKNVLAKESLKAYKDCLS 1211
Query 541 KARNekekkecekLLTPEARKLLE-EAKESLKAYKDCVSKARNekekkecekLLTPEARK 599
+ARNE E++ CEKLLTPEARKLLE E K S+KAY DCVS+ARNEKEK+ECEKLLTPEARK
Sbjct 1212 QARNEEERRACEKLLTPEARKLLEQEVKKSVKAYLDCVSRARNEKEKQECEKLLTPEARK 1271
Query 600 LLEQEVKKSVKAYLDCVSRARNekekkecekLLTPEARKFLAKQVLNCLEKAGNEEERKA 659
+L +E+++ KA DC+ A P+ R +++CL+ ++EE
Sbjct 1272 FLAKELQQKDKAIKDCLKNA-------------DPNDR----AAIMKCLDGLSDEEK--- 1311
Query 660 CLKNLPKDLQENVLAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLLEQEVKKSVKA 719
LK L + VL DCL AR +EE+R C++L + L+++ +K ++
Sbjct 1312 -LKYLQEAREKAVL---------DCLKTARTDEEKRKCQNLYS----DLIQEIQNKRTQS 1357
Query 720 YLDCVSKARNekekkecekLLTPEARKFLAKELQQKDKAIKDCLKN-ADPNDRAAIMKCL 778
++ L+ R L+Q +CL N DP D+ AI +CL
Sbjct 1358 ----------------KQNQLSKTER------LHQ----ASECLDNLDDPTDQEAIEQCL 1391
Query 779 DGLSDEEK 786
+GLSD E+
Sbjct 1392 EGLSDSER 1399
Score = 320 bits (1199), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 339/597 (57%), Positives = 419/597 (71%), Gaps = 70/597 (11%)
Query 282 YLDCVSQakneaekkecekLLTPEA--KKLLEQQ----ALDCLKNAKTDEERKKCLK--- 332
Y DC+ +AK E E+ C L+ E K LL+QQ ALDCLKNAKTDEER+ CLK
Sbjct 474 YNDCIKNAKTEEERIKCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEERNECLKLIN 533
Query 333 --DLPKDLQKKVLAKKSVKAYLDCVSKARNekekkecekLLTPEARKLLEEAKESLKAYK 390
++ ++K + +K ++ Y DC+ +A+ E EK+EC K L+ EA L + ++L
Sbjct 534 DPEIREKFRKELGLQKELQEYKDCIKNAKTEAEKNECLKGLSKEAIERLKQ--QAL---- 587
Query 391 DCVSKARNEEERRACeklltpeakklleeeakeSVKAYLDCVSQakteaekkecek-llt 449
DC+ +A+ +EER+ C L E A SVKAY DCVS+A+ E EKKECEK L
Sbjct 588 DCLKNAKTDEERKEC--LKNIPQDLQKELLADMSVKAYKDCVSKARNEKEKKECEKLLTP 645
Query 450 peakkkleeakksvkaYLDCVSQAKTEADKKECEKLLTPEAKKLLEQQALDCLKNAKTEA 509
K EEAK SVKAYLDCVSQAKTE++KKECEKLLTPEAKKLLEQQALDCLK+AKTEA
Sbjct 646 EAKKLLEEEAKESVKAYLDCVSQAKTESEKKECEKLLTPEAKKLLEQQALDCLKSAKTEA 705
Query 510 DKKRCVKDLPKDLQKKVLAKKSVKAYLDCVSKARNekekkecekLLTPEARKLLEEAKES 569
+KKRCVKDLPKDLQKKVLAK SVKAYLDCVS+A+ E EK+ECEKLLTPEA+KLLEEAKES
Sbjct 706 EKKRCVKDLPKDLQKKVLAKESVKAYLDCVSQAKTEAEKQECEKLLTPEAKKLLEEAKES 765
Query 570 LKAYKDCVSKARNekekkecekLLTPEARKLLEQEVKKSVKAYLDCVSRARNekekkece 629
LKAYKDCVS+ARNEKEK+ECEKLLTPEA+KLLE+E K SVKAYLDCVS+A+ E EK+ECE
Sbjct 766 LKAYKDCVSRARNEKEKQECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEKQECE 825
Query 630 kLL--------------------------------------TPEARKFLAKQVLNCLEKA 651
KLL TPEA+K+L +Q L+CL A
Sbjct 826 KLLTPEAKKLLEEAKESLKAYKDCVSRARNEKEKQECEKLLTPEAKKLLEQQALDCLKSA 885
Query 652 GNEEERKACLKNLPKDLQENVLAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLLEQ 711
E E+K C+K+LPKDLQ +VLAKES+KAY DC+SQA+ E E++ CEKLLTPEA+KLLE
Sbjct 886 KTEAEKKRCVKDLPKDLQKKVLAKESVKAYLDCVSQAKTEAEKQECEKLLTPEAKKLLE- 944
Query 712 EVKKSVKAYLDCVSKARNekekkecekLLTPEARKFLAKELQQKDKAIKDCLKNADPNDR 771
E K S+KAY DCVS+ARNEKEK+ECEKLLTPEA+K+L E ++ KA KDC+ A +
Sbjct 945 EAKESLKAYKDCVSRARNEKEKQECEKLLTPEAKKLLE-EAKESLKAYKDCVSRARNEKE 1003
Query 772 AAIMKCLDGLSDEEKLKYLQEAREKAVLDCLKTARTDEEKRKCQNLYSDLIQEIQNK 828
L L+ E K K L++ LDCLK+A+T+ EK++C + DL +++Q+K
Sbjct 1004 KKECEKL--LTPEAK-KLLEQ----QALDCLKSAKTEAEKKRCVK---DLPKDLQKK 1050
Score = 176 bits (652), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 249/548 (46%), Positives = 336/548 (62%), Gaps = 102/548 (18%)
Query 316 DCLKNAKTDEERKKCLKDLPKDLQKKVLAKKSVKAYLDCVSKARNekekkecekLLTPEA 375
+C+ N+ EE CLK L KD + + KK++ AY DC+ +A+ E E+ C L+ E
Sbjct 443 ECISNGGNYEE---CLK-LIKDKKLQDQMKKTLEAYNDCIKNAKTEEERIKCLDLIKDEN 498
Query 376 --RKLLEEAKESLKAYKDCVSKARNEEERRAC---eklltpeakklleeeakeSVKAYLD 430
+ LL++ K + DC+ +A+ +EER C + K E + ++ Y D
Sbjct 499 LKKSLLNQQKVQVAL--DCLKNAKTDEERNECLKLINDPEIREKFRKELGLQKELQEYKD 556
Query 431 CVSQakteaekkeceklltpeakkkleeakksvkaYLDCVSQAKTEADKKECEKLLTPEA 490
C+ +AKTEAEK+EC K L+ EA +L + LDC+ +AKT+ ++KEC
Sbjct 557 CIKNAKTEAEKNECLKGLSKEAIERLKQQA------LDCLKNAKTDEERKEC-------- 602
Query 491 KKLLEQQALDCLKNAKTEADKKRCVKDLPKDLQKKVLAKKSVKAYLDCVSKARNekekke 550
+K++P+DLQK +LA SVKAY DCVSKARNEKEKKE
Sbjct 603 ------------------------LKNIPQDLQKELLADMSVKAYKDCVSKARNEKEKKE 638
Query 551 cekLLTPEARKLL-EEAKESLKAYKDCVSKARNekekkecekLLTPEARKLLEQE----- 604
CEKLLTPEA+KLL EEAKES+KAY DCVS+A+ E EKKECEKLLTPEA+KLLEQ+
Sbjct 639 CEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTESEKKECEKLLTPEAKKLLEQQALDCL 698
Query 605 -------------------------VKKSVKAYLDCVSRARNekekkecekLLTPEARKF 639
K SVKAYLDCVS+A+ E EK+ECEKLLTPEA+K+
Sbjct 699 KSAKTEAEKKRCVKDLPKDLQKKVLAKESVKAYLDCVSQAKTEAEKQECEKLLTPEAKKL 758
Query 640 L--AKQVL----NCLEKAGNEEERKACLKNLPKD----LQENVLAKESLKAYKDCLSQAR 689
L AK+ L +C+ +A NE E++ C K L + L+E+ AKES+KAY DC+SQA+
Sbjct 759 LEEAKESLKAYKDCVSRARNEKEKQECEKLLTPEAKKLLEEE--AKESVKAYLDCVSQAK 816
Query 690 NEEERRACEKLLTPEARKLLEQEVKKSVKAYLDCVSKARNekekkecekLLTPEARKFLA 749
E E++ CEKLLTPEA+KLLE E K S+KAY DCVS+ARNEKEK+ECEKLLTPEA+K+L
Sbjct 817 TEAEKQECEKLLTPEAKKLLE-EAKESLKAYKDCVSRARNEKEKQECEKLLTPEAKKLL- 874
Query 750 KELQQKDKAIKDCLKNADPNDRAAIMKCLDGLSDEEKLKYLQEAREKAVLDCLKTARTDE 809
++ DCLK+A + A +C+ +L+ + + K L KA LDC+ A+T+
Sbjct 875 ------EQQALDCLKSAKTE--AEKKRCVKDLPKDLQKKVLAKESVKAYLDCVSQAKTEA 926
Query 810 EKRKCQNL 817
EK+ C++L
Sbjct 927 EKQECEKL 934
Score = 72.6 bits (256), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/76 (74%), Positives = 67/76 (89%), Gaps = 1/76 (1%)
Query 1 MKDLPKDLQKKVLAKKSVKAYLDCVSKARNekekkecekLLTPEARKLL-EEAKESLKAY 59
+K++P+DLQK +LA SVKAY DCVSKARNEKEKKECEKLLTPEA+KLL EEAKES+KAY
Sbjct 603 LKNIPQDLQKELLADMSVKAYKDCVSKARNEKEKKECEKLLTPEAKKLLEEEAKESVKAY 662
Query 60 KDCVSKARNEEERRAC 75
DCVS+A+ E E++ C
Sbjct 663 LDCVSQAKTESEKKEC 678
Score = 64.2 bits (224), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/200 (40%), Positives = 117/200 (59%), Gaps = 38/200 (19%)
Query 646 NCLEKAGNEEERKACLKNL-PKDLQENVLAKESLKAYKDCLSQARNEEERRACEKLLTPE 704
+C+ ++GN EE CLK + K LQ+++ K +L AY+DC+ +A+ EEER C L+ E
Sbjct 443 ECISNGGNYEE---CLKLIKDKKLQDQM--KKTLEAYNDCIKNAKTEEERIKCLDLIKDE 497
Query 705 A--RKLLEQEVKKSVKAYLDCVSKARNekekkecekLLT-PEAR-KF-----LAKELQQK 755
+ LL+Q+ V+ LDC+ +A+ + E++EC KL+ PE R KF L KELQ+
Sbjct 498 NLKKSLLNQQ---KVQVALDCLKNAKTDEERNECLKLINDPEIREKFRKELGLQKELQE- 553
Query 756 DKAIKDCLKNADPNDRAAIMKCLDGLSDE--EKLKYLQEAREKAVLDCLKTARTDEEKRK 813
KDC+KNA + A CL GLS E E+LK + LDCLK A+TDEE++
Sbjct 554 ---YKDCIKNAKTE--AEKNECLKGLSKEAIERLK-------QQALDCLKNAKTDEERKE 601
Query 814 C-----QNLYSDLIQEIQNK 828
C Q+L +L+ ++ K
Sbjct 602 CLKNIPQDLQKELLADMSVK 621
Score = 44.2 bits (148), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/115 (35%), Positives = 69/115 (60%), Gaps = 14/115 (12%)
Query 758 AIKDCLKNADPNDRAAIMKCLDGLSDEEKLK--YLQEAREKAVLDCLKTARTDEEKRKCQ 815
A +DC+KNA ++ +KCLD L +E+LK L++ + + LDCLK A+TDEE+ C
Sbjct 473 AYNDCIKNAKTEE--ERIKCLD-LIKDENLKKSLLNQQKVQVALDCLKNAKTDEERNECL 529
Query 816 NLYSDLIQEIQNKRTQNKQNQLSKTERLHQASECLDNLDDPTDQEAIEQCLEGLS 870
+L +D EI++K +++L+ L++ +C+ N + + ++CL GLS
Sbjct 530 KLIND--PEIREKF----RKELGLQKELQEYKDCIKN---AKTEAEKNECLKGLS 575
Score = 38.7 bits (127), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/90 (38%), Positives = 54/90 (60%), Gaps = 11/90 (12%)
Query 136 YLDCVSQakneaekkecekLLTPEA--KKLLEQQ----ALDCLKNAKTEADKKRCVK--- 186
Y DC+ +AK E E+ C L+ E K LL+QQ ALDCLKNAKT+ +++ C+K
Sbjct 474 YNDCIKNAKTEEERIKCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEERNECLKLIN 533
Query 187 --DLPKDLQKKVLAKESLKAYKDCVSKARN 214
++ ++K + + L+ YKDC+ +A+
Sbjct 534 DPEIREKFRKELGLQKELQEYKDCIKNAKT 563
Score = 28.0 bits (86), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/63 (35%), Positives = 37/63 (59%), Gaps = 4/63 (6%)
Query 15 KKSVKAYLDCVSKARNekekkecekLLTPEA--RKLLEEAKESLKAYKDCVSKARNEEER 72
KK++ AY DC+ +A+ E E+ C L+ E + LL++ K + DC+ +A+ +EER
Sbjct 468 KKTLEAYNDCIKNAKTEEERIKCLDLIKDENLKKSLLNQQKVQVAL--DCLKNAKTDEER 525
Query 73 RAC 75
C
Sbjct 526 NEC 528 |